Psyllid ID: psy12777

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------
Protein Sequence
MQNPGRLEFIVILYPKHAFCDEERERNFAMYKNDTSPIRNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEDVTTTVVTTKPYPETTITTEKTEPSPSTVYETSSSGRNIRHLPCVSRRTGETGLCMFAFSCAKANGTHLGTCIDRFYFGSCCKIAGETDVDISEPINNFIHNTNHIDEHSSSTIEEETNMIGGGTAYGTSTTPSLVTWTTVDEIPVIPPDRTRPPPLVTTIKAPPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTDW
Secondary Structure (PSIPRED)
ccccccEEEEEEEcccccccHHHHHHcEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEcEEEccccccEEccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccEEEEEcccccccEEEEEEEEEcccEEEEccccccccccccEEEEEccccccccccccccEEEEEEEEEEccccccccccccEEEEEEcccccccccccccccccccccccccEEEEEEcccccccccccccccEEEEEEccccccccccccccccccEEEccccccccccccEEEEEEEcccEEEEEEEEEEEccHHHHHHcccccccccEEEEEEEcccccccccEEEEcccccccccccEEEEEEcccHHHHHHHccccccccccccEEEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEccccccccHHHHHHHHEEcccccccccccEEEEccccccccccccccccccccEEEEEcccccccccccccccEEEEEEEEEccccccccccccccccccccccEEEEccccccEEEEccccccccccEEEccccccccccccEEcccccccEEEEEEEEEcccccccEEEEEcEEccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccEEEEcccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcEccEEccccccccEEEEEEEEccEEEEEEEEEEEEccEEEEcHHHHcccccccEEEEEEEEEccccccccccEEEEEEEEEEcccccccccccccEEEEEccccccEccEcccEcccccccccccEEEEEEccccccccccEEEEEEEEccHHHcccccccccccccHHHHcEccEEccccccccEEEEEEEEccEEEEEEEEEEEEccEEEEcHHHHcHHHHHHHHHcccccccccccccccccccccccHcEEEEEEEEcHHHHHHHcccccccccccccEEEEEccccccccccccccccccc
Coil and Loop (DISEMBL)
mqnpgrleFIVILypkhafcdeeRERNFAmykndtspirnvtttvvttkpypetttttektepspstvyetssmspsspkpspttstvsttafidesneiesqginmsnykedvtttvvttkpypettittektepspstvyetsssgrnirhlpcvsrrtgetglCMFAFScakangthlgtcidrfyfgscckiagetdvdisepinnfihntnhidehssstieeetnmigggtaygtsttpslvtwttvdeipvippdrtrppplvttikappstvaspvtssteSWVQISLttlsfpppqqnvtttvvttkpypetttttektepspstvyetssmspsspkpspttstvsttafidesneiesqginmsnykevcgrrlfpssrivggekatfgkwpwqiSLRQWIRSTYLHKCGAALFNENWAVTAahcvedvppsdlllrlgehdlsteeepygyqeRRVQIvashpqfdprtfEYDLALLrfyepvkfqpniipicvpeddtnfvgtsahvtgwgrlyegrfrrsyghpatrqEMATCWNHflgnrilfpssrivggekatfgkwpwqiSLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMaladgplpsvlqevsvpvinnSLCETMYRAAgfiehipeificagwrkgsfdsceehardgtdw
Flexible Loop (DISEMBL)
mqnpgrleFIVILYPKHAFCDEERERNFamykndtspirnvtttvvttkpypetttttektepspstvyetssmspsspkpsptTSTVSTTAFidesneiesqginmsnykedvtttvvttkpypettittektepspstvyetsssgrnirhlpcVSRRTGETGLCMFAFSCAKANGTHLGTCIDRFYFGSCCKIAGETDVDISEPINNFIHNTNHIDEHSSSTIEEETNMIGGGTAYGTSTTPSLVTWTTvdeipvippdrtrpppLVTTIKAPPSTVASPVTSSTESWVQISLttlsfpppqqnvtttvvttkpypetttttektepspstvyetssmspsspkpspttSTVSTTAFidesneiesqginmSNYKEVCGRRLFPSSRIvggekatfgkwpwqISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTDW
Low Complexity Region (SEG)
MQNPGRLEFIVILYPKHAFCDEERERNFAMYKNDTSPIRNvtttvvttkpypetttttektepspstvyetssmspsspkpspttstvsttAFIDESNEIESQGINMSNykedvtttvvttkpypettittektepspstVYETSSSGRNIRHLPCVSRRTGETGLCMFAFSCAKANGTHLGTCIDRFYFGSCCKIAGETDVDISEPINNFIHNTNHIDEHSSSTIEEETNMIGGGTAYGtsttpslvtwttvDEipvippdrtrppplvtTIKappstvaspvtsstESWVQISLTTLSFPPPQQNvtttvvttkpypetttttektepspstvyetssmspsspkpspttstvsttAFIDESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTDW
Disordered region (IsUnstruct)
******LEFIVILYPKHAFCDEERERNFAMYKNDTSPIRNVTTTVV***********************************************************************V********************************IRHLPCVSRRTGETGLCMFAFSCAKANGTHLGTCIDRFYFGSCCKIAGETDVDISEPINNFIHNTNHI**************IGGGTAYGTSTTPSLVTWTTVDEIPVI*******************************WVQISLTTL*************************************************************************NMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDL*****PYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSF*************
Disordered Region (DISOPRED)
****GRL*FIVILYPKHAFCDEERERNFAMYKNDTSPI*N*****************************************************************************VVTTK*********************************************MFAFSCAKANGTHLGTCIDRFYFGSCCKIAGETDVDISEPINNFIHNTN*******************************************************************************************************************************************************************VCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE**A******
Disordered Region (DISEMBL)
MQNPGRLEFIVILYPKHAFCDEERERNFAMYKNDTSPIRNVTTTVVTTKP**************************************STTAFIDESNEIESQGINMSNYKEDVTTTVVTTKPYPET*********************RNIRHLPCVSRRTGETGLCMFAFSCAKANGTHLGTCIDRFYFGSCCKIAGETDVDISEPINNFIHNTNHIDEHSSSTIEEETNMIGGGTAYGTSTTPSLVTWTTVDEIPVIPPDRTRPPPLVTTIKAPP*************WVQISLTTLSFPPPQQNVTTTVVTTKP**************************************STTAFIDESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFD************
Disordered Region (DISPRO)
***PGRLEFIVILYPKHAFCDEERERNFAMYKNDTSPIRNVTTTVVTTKPYPE********EPSPSTVYETSS***********TSTVSTTAFIDESNEIESQGINMSNYKEDVTTTVVTTKPYPETTITTEKT*PSPSTVYETSSSGRNIRHLPCVSRRTGETGLCMFAFSCAKANGTHLGTCIDRFYFGSCCKIAGETDVDISEPINNFIHNTNHI***SS**I*******G*******************************************STVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYET******************TTAF******IESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE*H*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQNPGRLEFIVILYPKHAFCDEERERNFAMYKNDTSPIRNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEDVTTTVVTTKPYPETTITTEKTEPSPSTVYETSSSGRNIRHLPCVSRRTGETGLCMFAFSCAKANGTHLGTCIDRFYFGSCCKIAGETDVDISEPINNFIHNTNHIDEHSSSTIEEETNMIGGGTAYGTSTTPSLVTWTTVDEIPVIPPDRTRPPPLVTTIKAPPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTDW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	697	2.2.26 [Sep-21-2011]
Q05319	787	Serine proteinase stubble	no	N/A	0.269	0.238	0.412	3e-38
Q0IIH7	855	Suppressor of tumorigenic	yes	N/A	0.200	0.163	0.425	2e-25
Q9Y5Y6	855	Suppressor of tumorigenic	yes	N/A	0.208	0.169	0.414	3e-24
P40313	264	Chymotrypsin-like proteas	no	N/A	0.189	0.5	0.385	2e-21
P56677	855	Suppressor of tumorigenic	yes	N/A	0.208	0.169	0.388	4e-21
Q14B25	312	Serine protease 48 OS=Mus	no	N/A	0.219	0.490	0.380	6e-21
P69525	1065	Transmembrane protease se	no	N/A	0.329	0.215	0.309	1e-20
Q9CR35	263	Chymotrypsinogen B OS=Mus	no	N/A	0.185	0.490	0.398	3e-20
P17538	263	Chymotrypsinogen B OS=Hom	no	N/A	0.185	0.490	0.398	3e-20
Q6GPI1	263	Chymotrypsinogen B2 OS=Ho	no	N/A	0.185	0.490	0.398	4e-20

>sp|Q05319|STUB_DROME Serine proteinase stubble OS=Drosophila melanogaster GN=Sb PE=2 SV=2

 Score =  160 bits (405), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 124/206 (60%), Gaps = 18/206 (8%)

Query: 338 TSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGI----------NMSNYKEVCGRRLF- 386
           TSS  P+  +P+  T  ++T+    E+NEI    I           +S  +  CG     
Sbjct: 483 TSSQRPT--QPTHRTPVLATSGI--ETNEISDSSIPDAGALGHVKTISAARSECGVPTLA 538

Query: 387 -PSSRIVGGEKATFGKWPWQISLRQ--WIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS 443
            P +RIVGG+ A FG+WPWQ+S+R+  +   +  H+CG AL NENW  TA HCV+D+  S
Sbjct: 539 RPETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLIS 598

Query: 444 DLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIP 503
            + +R+GE+D S  +E   Y ER V     HP++   T+EYDLAL++  +P++F P++ P
Sbjct: 599 QIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSP 658

Query: 504 ICVPEDDTNFVGTSAHVTGWGRLYEG 529
           IC+PE D+  +G +A VTGWGRL EG
Sbjct: 659 ICLPETDSLLIGMNATVTGWGRLSEG 684

Hormone dependent protease required for epithelial morphogenesis, including the formation of bristles, legs, and wings. Has a dual function, detaches imaginal disk cells from extracellular matrices through its extracellular proteolytic domain and transmits an outside-to-inside signal to its intracellular domain to modify the cytoskeleton during morphogenesis.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: -

>sp|Q0IIH7|ST14_BOVIN Suppressor of tumorigenicity 14 protein homolog OS=Bos taurus GN=ST14 PE=2 SV=1

 Score =  117 bits (294), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 88/160 (55%), Gaps = 20/160 (12%)

Query: 381 CGRRLFP-SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
           CGRR F   SR+VGGE +  G+WPWQ+SL       + H CGA+L + +W ++AAHC  D
Sbjct: 604 CGRRSFTRQSRVVGGENSDQGEWPWQVSLHA---QGHGHLCGASLISPSWMISAAHCFVD 660

Query: 440 VPPSDLLLR----------LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALL 489
               D   R          LG HD S    P G QER +Q +  HP F+  TF+YD+ALL
Sbjct: 661 ----DRGFRYSEHSVWTAFLGLHDQSKRNAP-GVQERGLQRIIKHPFFNDFTFDYDIALL 715

Query: 490 RFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYE 528
           +   PV++   I PIC+P  D  F  G +  VTGWG   E
Sbjct: 716 QLDRPVEYSATIRPICLPAADYTFPTGKAIWVTGWGHTQE 755

Degrades extracellular matrix. Proposed to play a role in breast cancer invasion and metastasis. Exhibits trypsin-like activity as defined by cleavage of synthetic substrates with Arg or Lys as the P1 site.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

EC: 0

EC: 9

>sp|Q9Y5Y6|ST14_HUMAN Suppressor of tumorigenicity 14 protein OS=Homo sapiens GN=ST14 PE=1 SV=2

 Score =  114 bits (284), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 87/157 (55%), Gaps = 12/157 (7%)

Query: 381 CGRRLFP-SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
           CG R F   +R+VGG  A  G+WPWQ+SL    +    H CGA+L + NW V+AAHC  D
Sbjct: 604 CGLRSFTRQARVVGGTDADEGEWPWQVSLHALGQG---HICGASLISPNWLVSAAHCYID 660

Query: 440 ------VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYE 493
                   P+     LG HD S    P G QERR++ + SHP F+  TF+YD+ALL   +
Sbjct: 661 DRGFRYSDPTQWTAFLGLHDQSQRSAP-GVQERRLKRIISHPFFNDFTFDYDIALLELEK 719

Query: 494 PVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
           P ++   + PIC+P+    F  G +  VTGWG    G
Sbjct: 720 PAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYG 756

Degrades extracellular matrix. Proposed to play a role in breast cancer invasion and metastasis. Exhibits trypsin-like activity as defined by cleavage of synthetic substrates with Arg or Lys as the P1 site.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

EC: 0

EC: 9

>sp|P40313|CTRL_HUMAN Chymotrypsin-like protease CTRL-1 OS=Homo sapiens GN=CTRL PE=2 SV=1

 Score =  104 bits (260), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 8/140 (5%)

Query: 388 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLL 447
           S RIV GE A  G WPWQ+SL+    S+  H CG +L +++W VTAAHC  +V P    +
Sbjct: 31  SQRIVNGENAVLGSWPWQVSLQD---SSGFHFCGGSLISQSWVVTAAHC--NVSPGRHFV 85

Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
            LGE+D S+  EP   Q   V    +HP ++  T   D+ LL+   P ++   I P+C+ 
Sbjct: 86  VLGEYDRSSNAEP--LQVLSVSRAITHPSWNSTTMNNDVTLLKLASPAQYTTRISPVCLA 143

Query: 508 EDDTNFV-GTSAHVTGWGRL 526
             +     G +   TGWGRL
Sbjct: 144 SSNEALTEGLTCVTTGWGRL 163

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|P56677|ST14_MOUSE Suppressor of tumorigenicity 14 protein homolog OS=Mus musculus GN=St14 PE=1 SV=2

 Score =  103 bits (257), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 12/157 (7%)

Query: 381 CGRRLF-PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
           CG R F   +R+VGG  A  G+WPWQ+SL    +    H CGA+L + +W V+AAHC +D
Sbjct: 604 CGLRSFTKQARVVGGTNADEGEWPWQVSLHALGQG---HLCGASLISPDWLVSAAHCFQD 660

Query: 440 ---VPPSDLLL---RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYE 493
                 SD  +    LG  D S +    G QE +++ + +HP F+  TF+YD+ALL   +
Sbjct: 661 DKNFKYSDYTMWTAFLGLLDQS-KRSASGVQELKLKRIITHPSFNDFTFDYDIALLELEK 719

Query: 494 PVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
            V++   + PIC+P+    F  G +  VTGWG   EG
Sbjct: 720 SVEYSTVVRPICLPDATHVFPAGKAIWVTGWGHTKEG 756

Degrades extracellular matrix. Exhibits trypsin-like activity as defined by cleavage of synthetic substrates with Arg or Lys as the P1 site.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

EC: 0

EC: 9

>sp|Q14B25|PRS48_MOUSE Serine protease 48 OS=Mus musculus GN=Prss48 PE=2 SV=2

 Score =  103 bits (256), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 88/171 (51%), Gaps = 18/171 (10%)

Query: 376 NYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 435
           N + VCGR +  + RIVGG+ A  G+WPWQ+SL    R  Y H CG +L +++W +TAAH
Sbjct: 26  NLQSVCGRPVH-TGRIVGGQDAALGRWPWQVSL----RFDYTHSCGGSLISDHWVLTAAH 80

Query: 436 CVEDVPPSDLL-LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP 494
           C++    S L  + LG  D         Y   R+ I   H     R  E D+ALL+    
Sbjct: 81  CIKKTWYSFLYSVWLGSIDREYSSTGKEYYVSRIAIPDKH-----RHTEADIALLKLSSR 135

Query: 495 VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
           V F   I+PIC+P       V  S  VTGWG+  EG +      P+T QE+
Sbjct: 136 VTFSSVILPICLPNISKQLTVPASCWVTGWGQNQEGHY------PSTLQEL 180

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|P69525|TMPS9_MOUSE Transmembrane protease serine 9 OS=Mus musculus GN=Tmprss9 PE=2 SV=1

 Score =  102 bits (253), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 123/265 (46%), Gaps = 35/265 (13%)

Query: 269 LVTTIKAPPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKT 328
           ++  + + PS++A P TSST          +   PP+      ++     PE TT+   T
Sbjct: 733 ILKAMSSDPSSMARPHTSSTR--------LIPSEPPKTTAAGLII-----PEATTSRLAT 779

Query: 329 EPSPSTVYETSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLFPS 388
              P      ++      +P  TT +  +T    ++    + G  + ++   CG  L P 
Sbjct: 780 ---PRATIRVTT------RPLNTTLSARSTTTRGQTAAPSAPGTTIHSHLPDCG--LAPP 828

Query: 389 ---SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSD 444
              +RIVGG  A+ G+WPWQ+SL  W+R    H+CGA L  E W ++AAHC +    P  
Sbjct: 829 GALTRIVGGSAASLGEWPWQVSL--WLRRRE-HRCGAVLVAERWLLSAAHCFDIYGDPMQ 885

Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
               LG   LS+ E     Q  RV  +  HP ++  T +YD+ALL    PV+    + PI
Sbjct: 886 WAAFLGTPFLSSTEG----QLERVARIYRHPFYNIYTLDYDVALLELAGPVRRSRLVRPI 941

Query: 505 CVPEDDTNFVGTSAHVTGWGRLYEG 529
           C+P       G    +TGWG L EG
Sbjct: 942 CLPGPARPPDGARCVITGWGSLREG 966

Serase-1 and serase-2 are serine proteases that hydrolyze the peptides N-t-Boc-Gln-Ala-Arg-AMC and N-t-Boc-Gln-Gly-Arg-AMC. In contrast, N-t-Boc-Ala-Phe-Lys-AMC and N-t-Boc-Ala-Pro-Ala-AMC are not significantly hydrolyzed.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|Q9CR35|CTRB1_MOUSE Chymotrypsinogen B OS=Mus musculus GN=Ctrb1 PE=2 SV=1

 Score =  101 bits (251), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)

Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR 448
           SRIV GE A  G WPWQ+SL+     T  H CG +L +ENW VTAAHC   V  +D+++ 
Sbjct: 32  SRIVNGEDAIPGSWPWQVSLQD---RTGFHFCGGSLISENWVVTAAHC--GVKTTDVVVA 86

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            GE D  ++EE    Q  ++  V  +P+F+  T   D+ LL+   P +F   +  +C+P 
Sbjct: 87  -GEFDQGSDEE--NVQVLKIAQVFKNPKFNSFTVRNDITLLKLATPAQFSETVSAVCLPT 143

Query: 509 DDTNF-VGTSAHVTGWGR 525
            D +F  GT    TGWG+
Sbjct: 144 VDDDFPAGTLCATTGWGK 161

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

>sp|P17538|CTRB1_HUMAN Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 SV=1

 Score =  100 bits (249), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 9/138 (6%)

Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR 448
           SRIV GE A  G WPWQ+SL+     T  H CG +L +E+W VTAAHC   V  SD+++ 
Sbjct: 32  SRIVNGEDAVPGSWPWQVSLQD---KTGFHFCGGSLISEDWVVTAAHC--GVRTSDVVVA 86

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            GE D  ++EE    Q  ++  V  +P+F   T   D+ LL+   P +F   +  +C+P 
Sbjct: 87  -GEFDQGSDEE--NIQVLKIAKVFKNPKFSILTVNNDITLLKLATPARFSQTVSAVCLPS 143

Query: 509 DDTNF-VGTSAHVTGWGR 525
            D +F  GT    TGWG+
Sbjct: 144 ADDDFPAGTLCATTGWGK 161

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

>sp|Q6GPI1|CTRB2_HUMAN Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 SV=2

 Score =  100 bits (249), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 9/138 (6%)

Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR 448
           SRIV GE A  G WPWQ+SL+     T  H CG +L +E+W VTAAHC   V  SD+++ 
Sbjct: 32  SRIVNGEDAVPGSWPWQVSLQD---KTGFHFCGGSLISEDWVVTAAHC--GVRTSDVVVA 86

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            GE D  ++EE    Q  ++  V  +P+F   T   D+ LL+   P +F   +  +C+P 
Sbjct: 87  -GEFDQGSDEE--NIQVLKIAKVFKNPKFSILTVNNDITLLKLATPARFSQTVSAVCLPS 143

Query: 509 DDTNF-VGTSAHVTGWGR 525
            D +F  GT    TGWG+
Sbjct: 144 ADDDFPAGTLCATTGWGK 161

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	697
193599044	856	PREDICTED: hypothetical protein LOC10016	0.426	0.346	0.588	2e-94
242015277	742	tripsin, putative [Pediculus humanus cor	0.205	0.192	0.899	4e-81
198459157	1042	GA24897 [Drosophila pseudoobscura pseudo	0.210	0.141	0.836	1e-77
307180566	815	Serine proteinase stubble [Camponotus fl	0.398	0.341	0.541	1e-77
322790616	921	hypothetical protein SINV_80038 [Solenop	0.241	0.182	0.745	1e-77
161076432	1041	notopleural, isoform A [Drosophila melan	0.265	0.177	0.718	2e-77
195155248	996	GL17747 [Drosophila persimilis] gi|19411	0.210	0.147	0.836	2e-77
157123332	188	Trypsin, putative [Aedes aegypti] gi|108	0.218	0.808	0.828	3e-75
328778359	977	PREDICTED: hypothetical protein LOC40982	0.229	0.163	0.761	4e-75
340723802	925	PREDICTED: hypothetical protein LOC10064	0.229	0.172	0.761	6e-75

>gi|193599044|ref|XP_001943207.1| PREDICTED: hypothetical protein LOC100162790 [Acyrthosiphon pisum]

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/328 (58%), Positives = 230/328 (70%), Gaps = 31/328 (9%)

Query: 224 STIEEETNMIG---GGTAYGTSTTPS-------------LVTWTTVDEIPVIPPDRTRPP 267
           ST+E  T +I      TA G + TPS             LVTWTT+D++PV+P + T+PP
Sbjct: 432 STVENVTEIISNFTAATANGQNQTPSYGSTTTVTSTSPTLVTWTTLDKVPVVPAENTKPP 491

Query: 268 PLVTTIKAPPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEK 327
           P   T K  PS       S+  SWV++ + T    P   +  T   ++  Y  T T ++ 
Sbjct: 492 PPSMTHK--PSVTDG---STLPSWVKLPVET--HEPNTVSAPTKESSSGAYSSTMTMSKP 544

Query: 328 TE-PSPS----TVYETSSMSP--SSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEV 380
           T  PSPS     V   ++ +   S+  PS T S +  +   D S E  +  +NMSNYK+V
Sbjct: 545 TTLPSPSDNDIVVINNNAETTYTSTQNPSSTLSMLMQSTSTD-SVEAGNAPLNMSNYKDV 603

Query: 381 CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV 440
           CGRRLFP++RIVGGEK +FGKWPWQISLRQW  STYLHKCGAALFNENWAVTAAHCVE+V
Sbjct: 604 CGRRLFPTARIVGGEKVSFGKWPWQISLRQWRTSTYLHKCGAALFNENWAVTAAHCVENV 663

Query: 441 PPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPN 500
           PPSDLLLRLGEHDLS EEEPYGY+ERR+QIVASHPQFDPRTFEYDLALLRFYEPV FQPN
Sbjct: 664 PPSDLLLRLGEHDLSVEEEPYGYEERRIQIVASHPQFDPRTFEYDLALLRFYEPVTFQPN 723

Query: 501 IIPICVPEDDTNFVGTSAHVTGWGRLYE 528
           IIP+CVPEDD+NFVG+SA+VTGWGRLYE
Sbjct: 724 IIPVCVPEDDSNFVGSSAYVTGWGRLYE 751

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015277|ref|XP_002428292.1| tripsin, putative [Pediculus humanus corporis] gi|212512876|gb|EEB15554.1| tripsin, putative [Pediculus humanus corporis]

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 134/149 (89%), Positives = 144/149 (96%)

Query: 380 VCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
           VCGRRLFP SR+VGGEK+TFGKWPWQISLRQW  STYLHKCGAAL NENWA+TAAHCVE+
Sbjct: 489 VCGRRLFPQSRVVGGEKSTFGKWPWQISLRQWRTSTYLHKCGAALLNENWAITAAHCVEN 548

Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQP 499
           VPPSDLLLRLGEHDLSTE+EPYG+QERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQP
Sbjct: 549 VPPSDLLLRLGEHDLSTEDEPYGFQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQP 608

Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYE 528
           NIIP+CVPED+TNFVG +A+VTGWGRLYE
Sbjct: 609 NIIPVCVPEDNTNFVGQTAYVTGWGRLYE 637

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198459157|ref|XP_002138648.1| GA24897 [Drosophila pseudoobscura pseudoobscura] gi|198136596|gb|EDY69206.1| GA24897 [Drosophila pseudoobscura pseudoobscura]

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 128/153 (83%), Positives = 140/153 (91%)

Query: 376 NYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 435
           +YKEVCGRR+FP  RIVGG  A FG+WPWQISLRQW  STYLHKCGAAL NENWA+TAAH
Sbjct: 784 DYKEVCGRRMFPEPRIVGGANAAFGRWPWQISLRQWRTSTYLHKCGAALLNENWAITAAH 843

Query: 436 CVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 495
           CV++VPPSDLLLRLGE+DL+ EEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV
Sbjct: 844 CVDNVPPSDLLLRLGEYDLAEEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 903

Query: 496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE 528
            FQPNIIP+CVPE+D NF+G +A VTGWGRLYE
Sbjct: 904 VFQPNIIPVCVPENDENFIGQTAFVTGWGRLYE 936

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180566|gb|EFN68522.1| Serine proteinase stubble [Camponotus floridanus]

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/292 (54%), Positives = 205/292 (70%), Gaps = 14/292 (4%)

Query: 241 TSTTPSLVTWTT-VDEIPVIPPDRTRPPPLVTTIKAPPSTVASPVTSSTESWVQI-SLTT 298
           T+ +P LVTW++  DE+ V  P+ +       T      T  SP+T+  + W+ I S +T
Sbjct: 428 TTYSPGLVTWSSNSDEVTVKTPETSSSTSTEATSSEQAETDWSPITTP-DGWIMIQSPST 486

Query: 299 LSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTSTVSTT 358
              P  Q++      TT+P  E+T    ++  S   + ET+S    + KP  TT   + T
Sbjct: 487 EKLPQTQES------TTEPVAESTV---QSLTSAKPLIETTSSPDITTKPMMTTLPSAIT 537

Query: 359 AF-IDESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYL 417
              ID    +  + +NMS+YK+VCGRRLFP +RIVGG++++FGKWPWQISLRQW   TYL
Sbjct: 538 GITIDTELPVPMETLNMSDYKQVCGRRLFPEARIVGGDQSSFGKWPWQISLRQWRSQTYL 597

Query: 418 HKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQF 477
           HKCGAAL NENWA+TAAHCVE V P+DLLLR+GEHDL+ E+EPYGYQERRVQIVA+HPQF
Sbjct: 598 HKCGAALLNENWAITAAHCVESVLPADLLLRIGEHDLANEDEPYGYQERRVQIVATHPQF 657

Query: 478 DPRTFEYDLALLRFYEP-VKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE 528
           D RTFEYDLALLRFYEP + FQPN++PIC+P+DD  +VG +A+VTGWGRLY+
Sbjct: 658 DARTFEYDLALLRFYEPLIPFQPNVLPICLPDDDETYVGRTAYVTGWGRLYD 709

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790616|gb|EFZ15424.1| hypothetical protein SINV_80038 [Solenopsis invicta]

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 126/169 (74%), Positives = 148/169 (87%), Gaps = 1/169 (0%)

Query: 361 IDESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKC 420
           ID    +  + +NMS+YK+VCGRRLFP  +IVGG++++FGKWPWQISLRQW   TYLHKC
Sbjct: 701 IDMELPVPMETLNMSDYKQVCGRRLFPEPKIVGGDRSSFGKWPWQISLRQWKSQTYLHKC 760

Query: 421 GAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR 480
           GAAL NENWA+TAAHCVE+VPPSDLLLR+GEHDLS E+EPYGYQERRVQIVASH QFD R
Sbjct: 761 GAALLNENWAITAAHCVENVPPSDLLLRIGEHDLSNEDEPYGYQERRVQIVASHQQFDAR 820

Query: 481 TFEYDLALLRFYEP-VKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE 528
           TFEYDLALLRFYEP V FQPN++PIC+P+DD  +VG +A+VTGWGRLY+
Sbjct: 821 TFEYDLALLRFYEPLVPFQPNVLPICLPDDDETYVGRTAYVTGWGRLYD 869

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161076432|ref|NP_610437.2| notopleural, isoform A [Drosophila melanogaster] gi|386767569|ref|NP_001246213.1| notopleural, isoform B [Drosophila melanogaster] gi|157400244|gb|AAF59007.2| notopleural, isoform A [Drosophila melanogaster] gi|383302353|gb|AFH07968.1| notopleural, isoform B [Drosophila melanogaster]

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 138/192 (71%), Positives = 158/192 (82%), Gaps = 7/192 (3%)

Query: 337 ETSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEK 396
           ET+  S   P  +   +T STT  +  +N +E  G++   YKEVCGRR+FP  RIVGG  
Sbjct: 751 ETTDYSGEEPNTTTIEATGSTT--VAPANALE--GVD---YKEVCGRRMFPEPRIVGGAN 803

Query: 397 ATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLST 456
           A FG+WPWQISLRQW  STYLHKCGAAL NENWA+TAAHCV++VPPSDLLLRLGE+DL+ 
Sbjct: 804 AAFGRWPWQISLRQWRTSTYLHKCGAALLNENWAITAAHCVDNVPPSDLLLRLGEYDLAE 863

Query: 457 EEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGT 516
           EEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV FQPNIIP+CVP++D NF+G 
Sbjct: 864 EEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVIFQPNIIPVCVPDNDENFIGQ 923

Query: 517 SAHVTGWGRLYE 528
           +A VTGWGRLYE
Sbjct: 924 TAFVTGWGRLYE 935

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195155248|ref|XP_002018517.1| GL17747 [Drosophila persimilis] gi|194114313|gb|EDW36356.1| GL17747 [Drosophila persimilis]

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 128/153 (83%), Positives = 140/153 (91%)

Query: 376 NYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 435
           +YKEVCGRR+FP  RIVGG  A FG+WPWQISLRQW  STYLHKCGAAL NENWA+TAAH
Sbjct: 738 DYKEVCGRRMFPEPRIVGGANAAFGRWPWQISLRQWRTSTYLHKCGAALLNENWAITAAH 797

Query: 436 CVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 495
           CV++VPPSDLLLRLGE+DL+ EEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV
Sbjct: 798 CVDNVPPSDLLLRLGEYDLAEEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 857

Query: 496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE 528
            FQPNIIP+CVPE+D NF+G +A VTGWGRLYE
Sbjct: 858 VFQPNIIPVCVPENDENFIGQTAFVTGWGRLYE 890

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123332|ref|XP_001660120.1| Trypsin, putative [Aedes aegypti] gi|108884513|gb|EAT48738.1| AAEL000253-PA [Aedes aegypti]

 Score =  289 bits (740), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 126/152 (82%), Positives = 138/152 (90%)

Query: 380 VCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
           VCG+R+FP  RIVGG KA FG+WPWQISLRQW  STYLHKCGAAL NENWA+TAAHCV++
Sbjct: 14  VCGKRMFPEPRIVGGTKAAFGRWPWQISLRQWRTSTYLHKCGAALLNENWAITAAHCVDN 73

Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQP 499
           VPPSDLLLRLGE+DL+ EEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV FQP
Sbjct: 74  VPPSDLLLRLGEYDLALEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVVFQP 133

Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRF 531
           NIIP+CVP+ D NF+G +A VTGWGRLYEG F
Sbjct: 134 NIIPVCVPDGDENFIGRTAFVTGWGRLYEGEF 165

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778359|ref|XP_393317.2| PREDICTED: hypothetical protein LOC409827 [Apis mellifera]

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 128/168 (76%), Positives = 147/168 (87%), Gaps = 8/168 (4%)

Query: 380 VCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
           VCGRR+FP SRIVGG +++FGKWPWQISLRQW  STYLHKCGAAL NENWA+TAAHCVE+
Sbjct: 722 VCGRRMFPESRIVGGIRSSFGKWPWQISLRQWRTSTYLHKCGAALLNENWAITAAHCVEN 781

Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP-VKFQ 498
           VPPSDLLLR+GEHDL+ E+EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP + FQ
Sbjct: 782 VPPSDLLLRIGEHDLANEDEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPLLPFQ 841

Query: 499 PNIIPICVPEDDTNFVGTSAHVTGWGRLY-EGRFRRSYGHPATRQEMA 545
           PN++PIC+P+DD  +VG +A+VTGWGRLY EG        P+T QE+A
Sbjct: 842 PNVLPICLPDDDETYVGRTAYVTGWGRLYDEGPL------PSTLQEVA 883

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723802|ref|XP_003400277.1| PREDICTED: hypothetical protein LOC100645137 [Bombus terrestris]

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 128/168 (76%), Positives = 147/168 (87%), Gaps = 8/168 (4%)

Query: 380 VCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
           VCGRRLFP SRIVGG +++FGKWPWQISLRQW  STYLHKCGAAL NENWA+TAAHCVE+
Sbjct: 670 VCGRRLFPESRIVGGNRSSFGKWPWQISLRQWRTSTYLHKCGAALLNENWAITAAHCVEN 729

Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP-VKFQ 498
           VPPSDLLLR+GEHDL+ E+EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP + FQ
Sbjct: 730 VPPSDLLLRIGEHDLANEDEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPLLPFQ 789

Query: 499 PNIIPICVPEDDTNFVGTSAHVTGWGRLY-EGRFRRSYGHPATRQEMA 545
           PN++PIC+P+DD ++VG +A+VTGWGRLY EG        P+  QE+A
Sbjct: 790 PNVLPICLPDDDESYVGRTAYVTGWGRLYDEGPL------PSVLQEVA 831

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	697
FB|FBgn0265011	1041	Np "Notopleural" [Drosophila m	0.219	0.146	0.830	2.5e-120
FB|FBgn0003319	787	Sb "Stubble" [Drosophila melan	0.205	0.181	0.482	1.1e-60
FB|FBgn0033359	1693	CG8213 [Drosophila melanogaste	0.226	0.093	0.425	7.9e-42
FB|FBgn0033362	561	CG8172 [Drosophila melanogaste	0.238	0.295	0.385	4.3e-39
ZFIN|ZDB-GENE-030131-1171	459	ctrb1 "chymotrypsinogen B1" [D	0.183	0.278	0.430	9.3e-34
ZFIN|ZDB-GENE-050208-573	800	tmprss9 "transmembrane proteas	0.208	0.181	0.374	2.5e-31
MGI|MGI:1916698	324	Prss21 "protease, serine, 21"	0.219	0.472	0.388	1.5e-30
FB|FBgn0042098	364	CG18735 [Drosophila melanogast	0.203	0.390	0.395	2.6e-30
MGI|MGI:2685865	312	Prss48 "protease, serine, 48"	0.219	0.490	0.380	2.7e-30
UNIPROTKB|F1NKH4	255	LOC418421 "Uncharacterized pro	0.205	0.560	0.393	2.3e-29

FB|FBgn0265011 Np "Notopleural" [Drosophila melanogaster (taxid:7227)]

 Score = 724 (259.9 bits), Expect = 2.5e-120, Sum P(3) = 2.5e-120
 Identities = 127/153 (83%), Positives = 140/153 (91%)

Query:   376 NYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 435
             +YKEVCGRR+FP  RIVGG  A FG+WPWQISLRQW  STYLHKCGAAL NENWA+TAAH
Sbjct:   783 DYKEVCGRRMFPEPRIVGGANAAFGRWPWQISLRQWRTSTYLHKCGAALLNENWAITAAH 842

Query:   436 CVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 495
             CV++VPPSDLLLRLGE+DL+ EEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV
Sbjct:   843 CVDNVPPSDLLLRLGEYDLAEEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 902

Query:   496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE 528
              FQPNIIP+CVP++D NF+G +A VTGWGRLYE
Sbjct:   903 IFQPNIIPVCVPDNDENFIGQTAFVTGWGRLYE 935

GO:0004252 "serine-type endopeptidase activity" evidence=ISS;NAS

GO:0006508 "proteolysis" evidence=IEA;NAS

FB|FBgn0003319 Sb "Stubble" [Drosophila melanogaster (taxid:7227)]

 Score = 393 (143.4 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
 Identities = 70/145 (48%), Positives = 100/145 (68%)

Query:   387 PSSRIVGGEKATFGKWPWQISLRQ--WIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSD 444
             P +RIVGG+ A FG+WPWQ+S+R+  +   +  H+CG AL NENW  TA HCV+D+  S 
Sbjct:   540 PETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQ 599

Query:   445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
             + +R+GE+D S  +E   Y ER V     HP++   T+EYDLAL++  +P++F P++ PI
Sbjct:   600 IRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPI 659

Query:   505 CVPEDDTNFVGTSAHVTGWGRLYEG 529
             C+PE D+  +G +A VTGWGRL EG
Sbjct:   660 CLPETDSLLIGMNATVTGWGRLSEG 684

GO:0007010 "cytoskeleton organization" evidence=NAS;IMP

GO:0005886 "plasma membrane" evidence=ISS

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

GO:0016335 "morphogenesis of larval imaginal disc epithelium" evidence=NAS

GO:0016020 "membrane" evidence=NAS

GO:0051017 "actin filament bundle assembly" evidence=IMP

FB|FBgn0033359 CG8213 [Drosophila melanogaster (taxid:7227)]

 Score = 315 (115.9 bits), Expect = 7.9e-42, Sum P(3) = 7.9e-42
 Identities = 71/167 (42%), Positives = 95/167 (56%)

Query:   381 CG-RRLFPSSRIVGGEKATFGKWPWQISLRQ--WIRSTYLHKCGAALFNENWAVTAAHCV 437
             CG R    S RIVGG+ +TFG +PWQ+ +R+  W+     +KCG  L    + +TAAHC 
Sbjct:  1438 CGVRPHVKSGRIVGGKGSTFGAYPWQVLVRESTWLGLFTKNKCGGVLITSRYVITAAHCQ 1497

Query:   438 EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF 497
                  S L+  +GE D+S + E      + V+ V  H Q+DP TFE DLALL    PV+F
Sbjct:  1498 PGFLAS-LVAVMGEFDISGDLESKRSVTKNVKRVIVHRQYDPATFENDLALLELDSPVQF 1556

Query:   498 QPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               +I+PIC+P D  +F G  A VTGWGRL  G      G P+  QE+
Sbjct:  1557 DTHIVPICMPNDVADFTGRMATVTGWGRLKYGG-----GVPSVLQEV 1598

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

GO:0006508 "proteolysis" evidence=IEA;NAS

FB|FBgn0033362 CG8172 [Drosophila melanogaster (taxid:7227)]

 Score = 321 (118.1 bits), Expect = 4.3e-39, Sum P(3) = 4.3e-39
 Identities = 67/174 (38%), Positives = 98/174 (56%)

Query:   362 DESNEIESQGINMSNYKEV--CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHK 419
             DE     S G + ++Y+ V  CG     S+RIVGG    FG  PWQ++L   I+S +L +
Sbjct:   285 DEYQSGGSGGYHDASYRPVPGCGEVYTRSNRIVGGHSTGFGSHPWQVAL---IKSGFLTR 341

Query:   420 ---CGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQ 476
                CG AL +  W +TAAHCV   P S++ +RLGE D+  +EE   ++E  ++    HP 
Sbjct:   342 KLSCGGALISNRWVITAAHCVASTPNSNMKIRLGEWDVRGQEERLNHEEYGIERKEVHPH 401

Query:   477 FDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGR 530
             ++P  F  D+AL+R    V ++ +IIP+C+P   T   G  A V GWGR   G+
Sbjct:   402 YNPADFVNDVALIRLDRNVVYKQHIIPVCLPPSTTKLTGKMATVAGWGRTRHGQ 455

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

ZFIN|ZDB-GENE-030131-1171 ctrb1 "chymotrypsinogen B1" [Danio rerio (taxid:7955)]

 Score = 260 (96.6 bits), Expect = 9.3e-34, Sum P(3) = 9.3e-34
 Identities = 59/137 (43%), Positives = 77/137 (56%)

Query:   389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR 448
             +RIV GE+A    WPWQ+SL+    ST  H CG +L NE W VTAAHC  +V  S  ++ 
Sbjct:    32 ARIVNGEEAVPHSWPWQVSLQD---STGFHFCGGSLINEWWVVTAAHC--NVRTSHRVI- 85

Query:   449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
             LGEHD S+  EP   Q   V  V  HP F+  T   D+ L++   P K   ++ P+C+ E
Sbjct:    86 LGEHDRSSNAEPI--QTMTVGKVFKHPNFNMFTINNDILLIKLATPAKINTHVSPVCLAE 143

Query:   509 DDTNFVGTSAHVT-GWG 524
              + NF G    VT GWG
Sbjct:   144 TNDNFPGGMKCVTSGWG 160

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008236 "serine-type peptidase activity" evidence=IEA

ZFIN|ZDB-GENE-050208-573 tmprss9 "transmembrane protease, serine 9" [Danio rerio (taxid:7955)]

 Score = 254 (94.5 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
 Identities = 58/155 (37%), Positives = 85/155 (54%)

Query:   375 SNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAA 434
             S +   CG R   S+RIVGGE    G++PWQ+SLR  +R    H CGA++ N  W V+AA
Sbjct:   228 SCFNVACGTRPVMSNRIVGGENTRHGEFPWQVSLR--LRGR--HTCGASIVNSRWLVSAA 283

Query:   435 HCVE-DVPPSDLLLRLGEHDLS-TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFY 492
             HC E +  P D    +G + +S  E E +    +   +V S P++DP T + D+ +L   
Sbjct:   284 HCFEVENNPKDWTALVGANQVSGAEAEAFIVNIK--SLVMS-PKYDPMTTDSDVTVLELE 340

Query:   493 EPVKFQPNIIPICVPEDDTNFV-GTSAHVTGWGRL 526
              P+KF   + P+C+P     F  G +  V+GWG L
Sbjct:   341 TPLKFSHYVQPVCIPSSSHVFTPGQNCIVSGWGAL 375

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008236 "serine-type peptidase activity" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

MGI|MGI:1916698 Prss21 "protease, serine, 21" [Mus musculus (taxid:10090)]

 Score = 253 (94.1 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
 Identities = 66/170 (38%), Positives = 86/170 (50%)

Query:   381 CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE-D 439
             CG R  PS RIVGG+ A  G+WPWQ SLR W      H CGA L N  W +TAAHC + D
Sbjct:    46 CGHRTIPS-RIVGGDDAELGRWPWQGSLRVWGN----HLCGATLLNRRWVLTAAHCFQKD 100

Query:   440 VPPSDLLLRLGEHDLSTEEEPYGYQ--ERRVQI--VASHPQFDPRTFEYDLALLRFYEPV 495
               P D  ++ GE  L++    +  Q    R QI  +   P++  + +  D+ALL+   PV
Sbjct:   101 NDPFDWTVQFGE--LTSRPSLWNLQAYSNRYQIEDIFLSPKYSEQ-YPNDIALLKLSSPV 157

Query:   496 KFQPNIIPICVPEDDTNFVG-TSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
              +   I PIC+      F   T   VTGWG + E     S   P T QE+
Sbjct:   158 TYNNFIQPICLLNSTYKFENRTDCWVTGWGAIGEDE---SLPSPNTLQEV 204

GO:0003824 "catalytic activity" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0007283 "spermatogenesis" evidence=TAS

GO:0008152 "metabolic process" evidence=ISO;IDA

GO:0008233 "peptidase activity" evidence=IEA

GO:0008236 "serine-type peptidase activity" evidence=ISO

GO:0016020 "membrane" evidence=IDA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0031225 "anchored to membrane" evidence=IEA

FB|FBgn0042098 CG18735 [Drosophila melanogaster (taxid:7227)]

 Score = 278 (102.9 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
 Identities = 59/149 (39%), Positives = 87/149 (58%)

Query:   381 CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV 440
             CG  +    RIVGG++    ++PW I L  W  + Y   CGA+L N+ +A+TAAHCV   
Sbjct:    74 CGN-INTRHRIVGGQETEVHEYPWMIML-MWFGNFY---CGASLVNDQYALTAAHCVNGF 128

Query:   441 PPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPN 500
                 + +RL EH+   ++      +RRV  V  HP++  R F+ D+AL+RF EPV+   +
Sbjct:   129 YHRLITVRLLEHN--RQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGID 186

Query:   501 IIPICVPEDDTNFVGTSAHVTGWGRLYEG 529
             + P+C+P    N+ G +A VTGWG L EG
Sbjct:   187 MHPVCMPTPSENYAGQTAVVTGWGALSEG 215

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

GO:0006508 "proteolysis" evidence=IEA;NAS

MGI|MGI:2685865 Prss48 "protease, serine, 48" [Mus musculus (taxid:10090)]

 Score = 261 (96.9 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
 Identities = 65/171 (38%), Positives = 88/171 (51%)

Query:   376 NYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 435
             N + VCGR +  + RIVGG+ A  G+WPWQ+SLR      Y H CG +L +++W +TAAH
Sbjct:    26 NLQSVCGRPVH-TGRIVGGQDAALGRWPWQVSLR----FDYTHSCGGSLISDHWVLTAAH 80

Query:   436 CVEDVPPSDLL-LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP 494
             C++    S L  + LG  D         Y   R+ I   H     R  E D+ALL+    
Sbjct:    81 CIKKTWYSFLYSVWLGSIDREYSSTGKEYYVSRIAIPDKH-----RHTEADIALLKLSSR 135

Query:   495 VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
             V F   I+PIC+P       V  S  VTGWG+  EG +      P+T QE+
Sbjct:   136 VTFSSVILPICLPNISKQLTVPASCWVTGWGQNQEGHY------PSTLQEL 180

GO:0003824 "catalytic activity" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0008236 "serine-type peptidase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

UNIPROTKB|F1NKH4 LOC418421 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 277 (102.6 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
 Identities = 61/155 (39%), Positives = 85/155 (54%)

Query:   381 CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV 440
             CGR LF  +RIVGGE A  GKWPWQ SL+      + H CGA++ ++ W ++AAHC  D 
Sbjct:     2 CGRNLFKKNRIVGGEDAQSGKWPWQASLQI---GAHGHVCGASVISKRWLLSAAHCFLDS 58

Query:   441 P------PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP 494
                    PS     +G H ++  E+      R ++ +  HPQ+D    +YD+ALL    P
Sbjct:    59 DSIRYSAPSRWRAYMGLHTVN--EKSNHIAMRSIKRIIVHPQYDQSISDYDIALLEMETP 116

Query:   495 VKFQPNIIPICVPEDDTNFV-GTSAHVTGWGRLYE 528
             V F   + PIC+P     F+ GT  +VTGWG + E
Sbjct:   117 VFFSELVQPICLPSSSRVFLYGTVCYVTGWGAIKE 151

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.21	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	697
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	3e-44
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	5e-43
pfam00089	218	pfam00089, Trypsin, Trypsin	3e-30
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	1e-14
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	9e-14
pfam00089	218	pfam00089, Trypsin, Trypsin	5e-10
COG5640	413	COG5640, COG5640, Secreted trypsin-like serine pro	1e-08
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	1e-07
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	7e-07
COG5640	413	COG5640, COG5640, Secreted trypsin-like serine pro	6e-06
COG3889	872	COG3889, COG3889, Predicted solute binding protein	2e-05
COG3889	872	COG3889, COG3889, Predicted solute binding protein	0.002
PLN02217	670	PLN02217, PLN02217, probable pectinesterase/pectin	0.004

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score =  158 bits (401), Expect = 3e-44
 Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 7/146 (4%)

Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           RIVGG +A  G +PWQ+SL+        H CG +L +  W +TAAHCV    PS++ +RL
Sbjct: 1   RIVGGSEANIGSFPWQVSLQ---YGGGRHFCGGSLISPRWVLTAAHCVRGSDPSNIRVRL 57

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE- 508
           G HDLS+ EE    Q  +V  V  HP ++P T++ D+ALL+  EPV    N+ PIC+P  
Sbjct: 58  GSHDLSSGEE---GQVIKVSKVIIHPNYNPSTYDNDIALLKLKEPVTLSDNVRPICLPSS 114

Query: 509 DDTNFVGTSAHVTGWGRLYEGRFRRS 534
           +     GT+  V+GWGR  EG     
Sbjct: 115 NYNVPAGTTCTVSGWGRTSEGAGSLP 140

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score =  154 bits (392), Expect = 5e-43
 Identities = 61/140 (43%), Positives = 84/140 (60%), Gaps = 6/140 (4%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A  G +PWQ+SL+    +   H CG +L +  W +TAAHCV    PS+  +RLG
Sbjct: 1   IVGGSEAKIGSFPWQVSLQ---YTGGRHFCGGSLISPRWVLTAAHCVYSSAPSNYTVRLG 57

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            HDLS+ E   G Q  +V+ V  HP ++P T++ D+ALL+   PV    N+ PIC+P   
Sbjct: 58  SHDLSSNEG--GGQVIKVKKVIVHPNYNPSTYDNDIALLKLKRPVTLSDNVRPICLPSSG 115

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
            N   GT+  V+GWGR  EG
Sbjct: 116 YNLPAGTTCTVSGWGRTSEG 135

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score =  118 bits (297), Expect = 3e-30
 Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 15/154 (9%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++A  G +PWQ+SL+    S+  H CG +L +ENW +TAAHCV +     + + LG
Sbjct: 1   IVGGDEAQPGSFPWQVSLQ---VSSGKHFCGGSLISENWVLTAAHCVSN--AKSVRVVLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++   E   G Q+  V+ V  HP ++P T   D+ALL+   PV     + PIC+P   
Sbjct: 56  AHNIVLREG--GEQKFDVKKVIVHPNYNPDTD-NDIALLKLKSPVTLGDTVRPICLPTAS 112

Query: 511 TNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQE 543
           ++  VGT+  V+GWG           G P T QE
Sbjct: 113 SDLPVGTTCTVSGWGNTKTL------GLPDTLQE 140

Length = 218

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score = 73.5 bits (181), Expect = 1e-14
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           RIVGG +A  G +PWQ+SL+        H CG +L +  W +TAAHCV  
Sbjct: 1   RIVGGSEANIGSFPWQVSLQ---YGGGRHFCGGSLISPRWVLTAAHCVRG 47

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score = 71.2 bits (175), Expect = 9e-14
 Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG +A  G +PWQ+SL+    +   H CG +L +  W +TAAHCV  
Sbjct: 1   IVGGSEAKIGSFPWQVSLQ---YTGGRHFCGGSLISPRWVLTAAHCVYS 46

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 3/49 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG++A  G +PWQ+SL+    S+  H CG +L +ENW +TAAHCV +
Sbjct: 1   IVGGDEAQPGSFPWQVSLQ---VSSGKHFCGGSLISENWVLTAAHCVSN 46

Length = 218

>gnl|CDD|227927 COG5640, COG5640, Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

 Score = 57.2 bits (138), Expect = 1e-08
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 9/145 (6%)

Query: 388 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHK-CGAALFNENWAVTAAHCVEDVPPSDLL 446
           SSRI+GG  A  G++P  ++L   I        CG +     + +TAAHC +   P    
Sbjct: 30  SSRIIGGSNANAGEYPSLVALVDRISDYVSGTFCGGSKLGGRYVLTAAHCADASSPISSD 89

Query: 447 LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           +     DL+   +    +   V+ +  H  + P     D+A+L        +   +P   
Sbjct: 90  VNRVVVDLNDSSQ---AERGHVRTIYVHEFYSPGNLGNDIAVLELA-----RAASLPRVK 141

Query: 507 PEDDTNFVGTSAHVTGWGRLYEGRF 531
                        VT    +  G F
Sbjct: 142 ITSFDASDTFLNSVTTVSPMTNGTF 166

Length = 413

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 631 W-KMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
           W + +   G LP  LQEV+VP+++N+ C    RA      I +  +CAG  +G  D+C+
Sbjct: 129 WGRTSEGAGSLPDTLQEVNVPIVSNATCR---RAYSGGGAITDNMLCAGGLEGGKDACQ 184

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score = 50.4 bits (121), Expect = 7e-07
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
            GPLP VLQEV+VP+++N+ C+  Y   G    I +  +CAG  +G  D+C+
Sbjct: 135 GGPLPDVLQEVNVPIVSNAECKRAYSYGGT---ITDNMLCAGGLEGGKDACQ 183

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|227927 COG5640, COG5640, Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

 Score = 49.1 bits (117), Expect = 6e-06
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHK-CGAALFNENWAVTAAHCVED 611
           SSRI+GG  A  G++P  ++L   I        CG +     + +TAAHC + 
Sbjct: 30  SSRIIGGSNANAGEYPSLVALVDRISDYVSGTFCGGSKLGGRYVLTAAHCADA 82

Length = 413

>gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General function prediction only]

 Score = 47.5 bits (113), Expect = 2e-05
 Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 16/144 (11%)

Query: 222 SSSTIEEETNMIG-GGTAYGT-STTPSLVTW-----TTVDEIPVIPPDRTRPPPLVTTIK 274
           SS     +T  IG   T YG+    P+   W     T   ++ ++ P       + T+  
Sbjct: 712 SSEAKNPDTVKIGQALTVYGSLEVFPAGENWGFIPTTKRVKVRIMDPASGTGTSITTSG- 770

Query: 275 APPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPST 334
               T   P  S T++   +S +  S        T+ V+      +T T T+ T  SPS 
Sbjct: 771 --TFTAEVP-QSPTKTETTLSYSAYSNTSILIETTSVVI-----TKTVTQTQTTTSSPSP 822

Query: 335 VYETSSMSPSSPKPSPTTSTVSTT 358
              TS    S+   + T+ + +TT
Sbjct: 823 TQTTSPTQTSTSTTTTTSPSQTTT 846

Length = 872

>gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General function prediction only]

 Score = 41.4 bits (97), Expect = 0.002
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 10/106 (9%)

Query: 42  TTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTSTVSTTAFIDESNEIE 101
           TT  V  +     + T      S +   E     P SP  + T +T+S +A+ + S  IE
Sbjct: 747 TTKRVKVRIMDPASGTGTSITTSGTFTAEV----PQSP--TKTETTLSYSAYSNTSILIE 800

Query: 102 SQGINMSNYKEDVTTTVVTTKPYPETTITTEKTEPSPSTVYETSSS 147
           +  + ++       T   TT   P  T TT  T+ S ST   TS S
Sbjct: 801 TTSVVITK----TVTQTQTTTSSPSPTQTTSPTQTSTSTTTTTSPS 842

Length = 872

>gnl|CDD|215130 PLN02217, PLN02217, probable pectinesterase/pectinesterase inhibitor

 Score = 40.1 bits (93), Expect = 0.004
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 242 STTPSLVTWTTVDEIPVIPPDRTRPPPLVTTIKAPPSTVASPVTSSTESWVQISLTTLSF 301
           S   S  T+++     V+ P  + P   + +  A PS + SP TS   S +    TT S 
Sbjct: 576 SAASSNTTFSSDSPSTVVAPSTSPPAGHLGSPPATPSKIVSPSTSPPASHLGSPSTTPSS 635

Query: 302 PPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTV 335
           P     V +T   +   PE++     TE S S V
Sbjct: 636 PESSIKVASTETAS---PESSIKVASTESSVSMV 666

Length = 670

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	697
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	100.0
KOG3627|consensus	256		99.97
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	99.97
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	99.96
COG5640	413	Secreted trypsin-like serine protease [Posttransla	99.77
PF09342	267	DUF1986: Domain of unknown function (DUF1986); Int	99.15
PF03761	282	DUF316: Domain of unknown function (DUF316) ; Inte	99.1
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	98.56
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	98.53
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	98.46
KOG3627|consensus	256		98.36
COG5640	413	Secreted trypsin-like serine protease [Posttransla	98.03
COG3591	251	V8-like Glu-specific endopeptidase [Amino acid tra	97.09
PF13365	120	Trypsin_2: Trypsin-like peptidase domain; PDB: 1Y8	96.91
TIGR02037	428	degP_htrA_DO periplasmic serine protease, Do/DeqQ	96.08
PF09342	267	DUF1986: Domain of unknown function (DUF1986); Int	94.93
PF03761	282	DUF316: Domain of unknown function (DUF316) ; Inte	94.88
TIGR02038	351	protease_degS periplasmic serine pepetdase DegS. T	94.22
PRK10139	455	serine endoprotease; Provisional	93.46
PRK10942	473	serine endoprotease; Provisional	93.12
PRK10898	353	serine endoprotease; Provisional	92.96
COG3591	251	V8-like Glu-specific endopeptidase [Amino acid tra	85.9
PF13365	120	Trypsin_2: Trypsin-like peptidase domain; PDB: 1Y8	85.89

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=100.00  E-value=6.1e-32  Score=264.38  Aligned_cols=189  Identities=42%  Similarity=0.796  Sum_probs=160.8

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+.+..++|||+|.|+...   ..+.|+|+||+++||||||||+.+.....+.|++|..+......  ..+.+.|.+
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~~~---~~~~C~GtlIs~~~VLTaAhC~~~~~~~~~~v~~g~~~~~~~~~--~~~~~~v~~   75 (232)
T cd00190           1 IVGGSEAKIGSFPWQVSLQYTG---GRHFCGGSLISPRWVLTAAHCVYSSAPSNYTVRLGSHDLSSNEG--GGQVIKVKK   75 (232)
T ss_pred             CcCCeECCCCCCCCEEEEEccC---CcEEEEEEEeeCCEEEECHHhcCCCCCccEEEEeCcccccCCCC--ceEEEEEEE
Confidence            6899999999999999998632   46889999999999999999998755677899999887765332  457889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC-CCCCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT-NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~-~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+.....+|||||||++++.++.+++|||||.... ...+..+.++|||....                     
T Consensus        76 ~~~hp~y~~~~~~~DiAll~L~~~~~~~~~v~picl~~~~~~~~~~~~~~~~G~g~~~~---------------------  134 (232)
T cd00190          76 VIVHPNYNPSTYDNDIALLKLKRPVTLSDNVRPICLPSSGYNLPAGTTCTVSGWGRTSE---------------------  134 (232)
T ss_pred             EEECCCCCCCCCcCCEEEEEECCcccCCCcccceECCCccccCCCCCEEEEEeCCcCCC---------------------
Confidence            99999999888999999999999999999999999998852 23589999999999765                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       135 --------------------------------------------------------------------------------  134 (232)
T cd00190         135 --------------------------------------------------------------------------------  134 (232)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             ....+..|+++.+++++.+.|+..+..   ...+.+++||++...+..+.|.||||||+
T Consensus       135 -------~~~~~~~~~~~~~~~~~~~~C~~~~~~---~~~~~~~~~C~~~~~~~~~~c~gdsGgpl  190 (232)
T cd00190         135 -------GGPLPDVLQEVNVPIVSNAECKRAYSY---GGTITDNMLCAGGLEGGKDACQGDSGGPL  190 (232)
T ss_pred             -------CCCCCceeeEEEeeeECHHHhhhhccC---cccCCCceEeeCCCCCCCccccCCCCCcE
Confidence                   123457899999999999999988752   23578999999976557899999999997

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>KOG3627|consensus

Probab=99.97  E-value=6.5e-31  Score=266.56  Aligned_cols=195  Identities=42%  Similarity=0.763  Sum_probs=158.9

Q ss_pred             CCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCCCCCCCC-cEE
Q psy12777        388 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLSTEEEPYG-YQE  465 (697)
Q Consensus       388 ~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~~~~~~~-~q~  465 (697)
                      ..||+||.++..+++||+|+|..+..  ..|+|||+||+++||||||||+... .. .+.|++|.+.......... ...
T Consensus        10 ~~~i~~g~~~~~~~~Pw~~~l~~~~~--~~~~Cggsli~~~~vltaaHC~~~~~~~-~~~V~~G~~~~~~~~~~~~~~~~   86 (256)
T KOG3627|consen   10 EGRIVGGTEAEPGSFPWQVSLQYGGN--GRHLCGGSLISPRWVLTAAHCVKGASAS-LYTVRLGEHDINLSVSEGEEQLV   86 (256)
T ss_pred             cCCEeCCccCCCCCCCCEEEEEECCC--cceeeeeEEeeCCEEEEChhhCCCCCCc-ceEEEECccccccccccCchhhh
Confidence            57999999999999999999987421  3679999999999999999999863 22 7889999886655422111 245


Q ss_pred             EEEEEEEECCCCCCCCCC-CceEEEecCcccccCCCeeeeecCCCCC---CCCCCEEEEEeccccCCCCccccCCCCccc
Q psy12777        466 RRVQIVASHPQFDPRTFE-YDLALLRFYEPVKFQPNIIPICVPEDDT---NFVGTSAHVTGWGRLYEGRFRRSYGHPATR  541 (697)
Q Consensus       466 ~~V~~IiiHP~Yn~~t~~-nDIALLrL~~PV~fs~~V~PICLP~~~~---~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~  541 (697)
                      ..|.++++||+|+..... ||||||+|.+++.|+++|+|||||....   ...+..|.++|||++..+            
T Consensus        87 ~~v~~~i~H~~y~~~~~~~nDiall~l~~~v~~~~~i~piclp~~~~~~~~~~~~~~~v~GWG~~~~~------------  154 (256)
T KOG3627|consen   87 GDVEKIIVHPNYNPRTLENNDIALLRLSEPVTFSSHIQPICLPSSADPYFPPGGTTCLVSGWGRTESG------------  154 (256)
T ss_pred             ceeeEEEECCCCCCCCCCCCCEEEEEECCCcccCCcccccCCCCCcccCCCCCCCEEEEEeCCCcCCC------------
Confidence            558888999999988877 9999999999999999999999986544   224689999999998762            


Q ss_pred             ccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeee
Q psy12777        542 QEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQ  621 (697)
Q Consensus       542 ~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~  621 (697)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (256)
T KOG3627|consen  155 --------------------------------------------------------------------------------  154 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        622 NCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       622 ~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                     ....+..||++.|+++++++|+..+....   .+.+.||||+...++.++|+|||||++
T Consensus       155 ---------------~~~~~~~L~~~~v~i~~~~~C~~~~~~~~---~~~~~~~Ca~~~~~~~~~C~GDSGGPL  210 (256)
T KOG3627|consen  155 ---------------GGPLPDTLQEVDVPIISNSECRRAYGGLG---TITDTMLCAGGPEGGKDACQGDSGGPL  210 (256)
T ss_pred             ---------------CCCCCceeEEEEEeEcChhHhcccccCcc---ccCCCEEeeCccCCCCccccCCCCCeE
Confidence                           13457889999999999999999875321   466789999976778899999999986

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=99.97  E-value=2.6e-29  Score=247.34  Aligned_cols=190  Identities=43%  Similarity=0.816  Sum_probs=159.1

Q ss_pred             CeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       390 RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      ||+||+.+..++|||+|.|+...   ..+.|+|+||++++|||||||+.......+.|++|.++.....+   .+.+.|.
T Consensus         1 ~~~~G~~~~~~~~Pw~~~i~~~~---~~~~C~GtlIs~~~VLTaahC~~~~~~~~~~v~~g~~~~~~~~~---~~~~~v~   74 (229)
T smart00020        1 RIVGGSEANIGSFPWQVSLQYRG---GRHFCGGSLISPRWVLTAAHCVYGSDPSNIRVRLGSHDLSSGEE---GQVIKVS   74 (229)
T ss_pred             CccCCCcCCCCCCCcEEEEEEcC---CCcEEEEEEecCCEEEECHHHcCCCCCcceEEEeCcccCCCCCC---ceEEeeE
Confidence            68999999999999999997631   36789999999999999999998755567999999887655332   3778999


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCC-CCCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN-FVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~-~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                      ++++||+|+.....+|||||+|++++.+++.++||||+..... ..+..+.++|||.....                   
T Consensus        75 ~~~~~p~~~~~~~~~DiAll~L~~~i~~~~~~~pi~l~~~~~~~~~~~~~~~~g~g~~~~~-------------------  135 (229)
T smart00020       75 KVIIHPNYNPSTYDNDIALLKLKSPVTLSDNVRPICLPSSNYNVPAGTTCTVSGWGRTSEG-------------------  135 (229)
T ss_pred             EEEECCCCCCCCCcCCEEEEEECcccCCCCceeeccCCCcccccCCCCEEEEEeCCCCCCC-------------------
Confidence            9999999998889999999999999999999999999987332 25899999999987531                   


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       136 --------------------------------------------------------------------------------  135 (229)
T smart00020      136 --------------------------------------------------------------------------------  135 (229)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              .......|+...+.+++.+.|...+...   ..+.+.+||++......+.|.|||||++
T Consensus       136 --------~~~~~~~~~~~~~~~~~~~~C~~~~~~~---~~~~~~~~C~~~~~~~~~~c~gdsG~pl  191 (229)
T smart00020      136 --------AGSLPDTLQEVNVPIVSNATCRRAYSGG---GAITDNMLCAGGLEGGKDACQGDSGGPL  191 (229)
T ss_pred             --------CCcCCCEeeEEEEEEeCHHHhhhhhccc---cccCCCcEeecCCCCCCcccCCCCCCee
Confidence                    2344568999999999999999876421   2478899999976556889999999986

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.96  E-value=4.5e-28  Score=235.71  Aligned_cols=183  Identities=38%  Similarity=0.751  Sum_probs=155.0

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||..+..++|||+|.|++..   ..++|+|+||+++||||||||+..  ...+.+++|...+.....  ..+.+.|.+
T Consensus         1 i~~g~~~~~~~~p~~v~i~~~~---~~~~C~G~li~~~~vLTaahC~~~--~~~~~v~~g~~~~~~~~~--~~~~~~v~~   73 (220)
T PF00089_consen    1 IVGGDPASPGEFPWVVSIRYSN---GRFFCTGTLISPRWVLTAAHCVDG--ASDIKVRLGTYSIRNSDG--SEQTIKVSK   73 (220)
T ss_dssp             SBSSEECGTTSSTTEEEEEETT---TEEEEEEEEEETTEEEEEGGGHTS--GGSEEEEESESBTTSTTT--TSEEEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEeeCC---CCeeEeEEeccccccccccccccc--cccccccccccccccccc--ccccccccc
Confidence            7899999999999999998732   188999999999999999999986  457889999854444332  358899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCC-CCCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN-FVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~-~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+.....+|||||+|++++.+.+.++|+||+..... ..+..+.++|||.....                    
T Consensus        74 ~~~h~~~~~~~~~~DiAll~L~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~~~--------------------  133 (220)
T PF00089_consen   74 IIIHPKYDPSTYDNDIALLKLDRPITFGDNIQPICLPSAGSDPNVGTSCIVVGWGRTSDN--------------------  133 (220)
T ss_dssp             EEEETTSBTTTTTTSEEEEEESSSSEHBSSBEESBBTSTTHTTTTTSEEEEEESSBSSTT--------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------------------
Confidence            999999998888999999999999999999999999995432 35899999999997651                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (220)
T PF00089_consen  134 --------------------------------------------------------------------------------  133 (220)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              + ....|+...+.+++.+.|+..+.     ..+.+.+||++.. +..+.|+|||||++
T Consensus       134 --------~-~~~~~~~~~~~~~~~~~c~~~~~-----~~~~~~~~c~~~~-~~~~~~~g~sG~pl  184 (220)
T PF00089_consen  134 --------G-YSSNLQSVTVPVVSRKTCRSSYN-----DNLTPNMICAGSS-GSGDACQGDSGGPL  184 (220)
T ss_dssp             --------S-BTSBEEEEEEEEEEHHHHHHHTT-----TTSTTTEEEEETT-SSSBGGTTTTTSEE
T ss_pred             --------c-ccccccccccccccccccccccc-----ccccccccccccc-cccccccccccccc
Confidence                    2 45689999999999999998753     2378899999965 66899999999986

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>COG5640 Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=1.1e-18  Score=185.16  Aligned_cols=106  Identities=25%  Similarity=0.436  Sum_probs=83.8

Q ss_pred             CCCeeCCeeCCCCCcceEEEEEEEecC-CceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEE
Q psy12777        388 SSRIVGGEKATFGKWPWQISLRQWIRS-TYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQER  466 (697)
Q Consensus       388 ~~RIVGG~~A~~GewPW~VsL~~~~~~-~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~  466 (697)
                      ..||+||..|..++||++|+|..+.+. -...+|||++|..|||||||||+....+....+..+..+++....   .+..
T Consensus        30 s~rIigGs~Anag~~P~~VaLv~~isd~~s~tfCGgs~l~~RYvLTAAHC~~~~s~is~d~~~vv~~l~d~Sq---~~rg  106 (413)
T COG5640          30 SSRIIGGSNANAGEYPSLVALVDRISDYVSGTFCGGSKLGGRYVLTAAHCADASSPISSDVNRVVVDLNDSSQ---AERG  106 (413)
T ss_pred             ceeEecCcccccccCchHHHHHhhcccccceeEeccceecceEEeeehhhccCCCCccccceEEEeccccccc---ccCc
Confidence            569999999999999999999765543 234689999999999999999998654333344444445544332   4566


Q ss_pred             EEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        467 RVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       467 ~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      .|..++.|..|...++.||||+++|.++..
T Consensus       107 ~vr~i~~~efY~~~n~~ND~Av~~l~~~a~  136 (413)
T COG5640         107 HVRTIYVHEFYSPGNLGNDIAVLELARAAS  136 (413)
T ss_pred             ceEEEeeecccccccccCcceeeccccccc
Confidence            799999999999999999999999998764

>PF09342 DUF1986: Domain of unknown function (DUF1986); InterPro: IPR015420 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.15  E-value=1.9e-10  Score=117.95  Aligned_cols=116  Identities=19%  Similarity=0.359  Sum_probs=89.8

Q ss_pred             CCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCC--CceEEEEccccCCCCCCCCCcEEEEEEEEEECCC
Q psy12777        399 FGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP--SDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQ  476 (697)
Q Consensus       399 ~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~--~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~  476 (697)
                      .-.|||.|.|+.    ++.+.|.|.||.+.|||++-.|+.+...  .-+.|.+|.......-+....|+++|..+..=| 
T Consensus        13 ~y~WPWlA~IYv----dG~~~CsgvLlD~~WlLvsssCl~~I~L~~~YvsallG~~Kt~~~v~Gp~EQI~rVD~~~~V~-   87 (267)
T PF09342_consen   13 DYHWPWLADIYV----DGRYWCSGVLLDPHWLLVSSSCLRGISLSHHYVSALLGGGKTYLSVDGPHEQISRVDCFKDVP-   87 (267)
T ss_pred             cccCcceeeEEE----cCeEEEEEEEeccceEEEeccccCCcccccceEEEEecCcceecccCCChheEEEeeeeeecc-
Confidence            346999999987    6789999999999999999999987543  456788887763332233356888887764332 


Q ss_pred             CCCCCCCCceEEEecCcccccCCCeeeeecCCCCCC-CCCCEEEEEeccc
Q psy12777        477 FDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN-FVGTSAHVTGWGR  525 (697)
Q Consensus       477 Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~-~~G~~c~VtGWG~  525 (697)
                            +.+++||+|++|+.|+.+|+|+.||..... .....|..+|-..
T Consensus        88 ------~S~v~LLHL~~~~~fTr~VlP~flp~~~~~~~~~~~CVAVg~d~  131 (267)
T PF09342_consen   88 ------ESNVLLLHLEQPANFTRYVLPTFLPETSNENESDDECVAVGHDD  131 (267)
T ss_pred             ------ccceeeeeecCcccceeeecccccccccCCCCCCCceEEEEccc
Confidence                  469999999999999999999999974332 2467999998654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found in serine endopeptidases belonging to MEROPS peptidase family S1A (clan PA). It is found in unusual mosaic proteins, which are encoded by the Drosophila nudel gene (see P98159 from SWISSPROT). Nudel is involved in defining embryonic dorsoventral polarity. Three proteases; ndl, gd and snk process easter to create active easter. Active easter defines cell identities along the dorsal-ventral continuum by activating the spz ligand for the Tl receptor in the ventral region of the embryo. Nudel, pipe and windbeutel together trigger the protease cascade within the extraembryonic perivitelline compartment which induces dorsoventral polarity of the Drosophila embryo [].

>PF03761 DUF316: Domain of unknown function (DUF316) ; InterPro: IPR005514 This is a family of uncharacterised proteins from Caenorhabditis elegans

Probab=99.10  E-value=1e-09  Score=114.57  Aligned_cols=143  Identities=21%  Similarity=0.306  Sum_probs=90.7

Q ss_pred             cccCCCcCC-CCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCce---------EE
Q psy12777        378 KEVCGRRLF-PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDL---------LL  447 (697)
Q Consensus       378 ~~~CG~~~~-~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l---------~V  447 (697)
                      ...||+... ...++..|..+..++.||+|.+..........+++|+|||+||||||+||+..... .|         ..
T Consensus        28 l~~CG~~~~~~~~~~~~g~~~~~~~~pW~v~v~~~~~~~~~~~~~gtlIS~RHiLtss~~~~~~~~-~W~~~~~~~~~~C  106 (282)
T PF03761_consen   28 LETCGKKKLPYPSKVFNGTPAESGEAPWAVSVYTKNHNEGNYFSTGTLISPRHILTSSHCVMNDKS-KWLNGEEFDNKKC  106 (282)
T ss_pred             HHhcCCCCCCCcccccCCcccccCCCCCEEEEEeccCcccceecceEEeccCeEEEeeeEEEeccc-ccccCccccccee
Confidence            578996543 35568899999999999999998754444456789999999999999999974211 11         00


Q ss_pred             EEccccCCCCC--------------CCCCcEEEEEEEEEEC----CCCCCCCCCCceEEEecCcccccCCCeeeeecCCC
Q psy12777        448 RLGEHDLSTEE--------------EPYGYQERRVQIVASH----PQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED  509 (697)
Q Consensus       448 ~LG~~dl~~~~--------------~~~~~q~~~V~~IiiH----P~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~  509 (697)
                      .-+..++....              .........|.++++-    ...+.....++++||+|+++  +...+.|+||+.+
T Consensus       107 ~~~~~~l~vP~~~l~~~~v~~~~~~~~~~~~~~~v~ka~il~~C~~~~~~~~~~~~~mIlEl~~~--~~~~~~~~Cl~~~  184 (282)
T PF03761_consen  107 EGNNNHLIVPEEVLSKIDVRCCNCFSNGKCFSIKVKKAYILNGCKKIKKNFNRPYSPMILELEED--FSKNVSPPCLADS  184 (282)
T ss_pred             eCCCceEEeCHHHhccEEEEeecccccCCcccceeEEEEEEecCCCcccccccccceEEEEEccc--ccccCCCEEeCCC
Confidence            00000000000              0001122445555441    11123345689999999999  7888999999987


Q ss_pred             CCCC-CCCEEEEEec
Q psy12777        510 DTNF-VGTSAHVTGW  523 (697)
Q Consensus       510 ~~~~-~G~~c~VtGW  523 (697)
                      .... .++...+.|+
T Consensus       185 ~~~~~~~~~~~~yg~  199 (282)
T PF03761_consen  185 STNWEKGDEVDVYGF  199 (282)
T ss_pred             ccccccCceEEEeec
Confidence            6543 3566666665

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=98.56  E-value=5e-08  Score=95.64  Aligned_cols=47  Identities=47%  Similarity=0.898  Sum_probs=41.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |++|+.+..+.|||++.|...   ...++|+|+||+++||||||||+.+.
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~~---~~~~~C~GtlIs~~~VLTaAhC~~~~   47 (232)
T cd00190           1 IVGGSEAKIGSFPWQVSLQYT---GGRHFCGGSLISPRWVLTAAHCVYSS   47 (232)
T ss_pred             CcCCeECCCCCCCCEEEEEcc---CCcEEEEEEEeeCCEEEECHHhcCCC
Confidence            679999999999999999741   16789999999999999999998763

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.53  E-value=8.1e-08  Score=93.62  Aligned_cols=46  Identities=41%  Similarity=0.873  Sum_probs=41.4

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||.++..++|||++.+..  + .+.++|.|+||+++||||||||+.+
T Consensus         1 i~~g~~~~~~~~p~~v~i~~--~-~~~~~C~G~li~~~~vLTaahC~~~   46 (220)
T PF00089_consen    1 IVGGDPASPGEFPWVVSIRY--S-NGRFFCTGTLISPRWVLTAAHCVDG   46 (220)
T ss_dssp             SBSSEECGTTSSTTEEEEEE--T-TTEEEEEEEEEETTEEEEEGGGHTS
T ss_pred             CCCCEECCCCCCCeEEEEee--C-CCCeeEeEEeccccccccccccccc
Confidence            78999999999999999974  1 1288999999999999999999998

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=98.46  E-value=1.3e-07  Score=93.31  Aligned_cols=48  Identities=48%  Similarity=0.920  Sum_probs=41.9

Q ss_pred             ceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       562 rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ||++|+.+.++.|||++.+.. .  ...++|+|+||++++|||||||+.+.
T Consensus         1 ~~~~G~~~~~~~~Pw~~~i~~-~--~~~~~C~GtlIs~~~VLTaahC~~~~   48 (229)
T smart00020        1 RIVGGSEANIGSFPWQVSLQY-R--GGRHFCGGSLISPRWVLTAAHCVYGS   48 (229)
T ss_pred             CccCCCcCCCCCCCcEEEEEE-c--CCCcEEEEEEecCCEEEECHHHcCCC
Confidence            689999999999999999963 1  14679999999999999999999863

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>KOG3627|consensus

Probab=98.36  E-value=3.4e-07  Score=93.32  Aligned_cols=51  Identities=45%  Similarity=0.841  Sum_probs=44.9

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ..||++|.++..+.+|||+.|..+..  ..++|||+||+++||||||||+.+.
T Consensus        10 ~~~i~~g~~~~~~~~Pw~~~l~~~~~--~~~~Cggsli~~~~vltaaHC~~~~   60 (256)
T KOG3627|consen   10 EGRIVGGTEAEPGSFPWQVSLQYGGN--GRHLCGGSLISPRWVLTAAHCVKGA   60 (256)
T ss_pred             cCCEeCCccCCCCCCCCEEEEEECCC--cceeeeeEEeeCCEEEEChhhCCCC
Confidence            57999999999999999999985322  4679999999999999999999885

>COG5640 Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

Probab=98.03  E-value=1.4e-06  Score=93.89  Aligned_cols=138  Identities=23%  Similarity=0.341  Sum_probs=93.5

Q ss_pred             ccCCCcceeCCcccCCCcccceEEEeeeeccccee-eeeeeEeeCcEEEeeccccccccc--------------------
Q psy12777        556 ILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLH-KCGAALFNENWAVTAAHCVEDLWS--------------------  614 (697)
Q Consensus       556 ~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~-~CgGslI~~~~VLSAAHC~~~~~~--------------------  614 (697)
                      +...+.||+||..|..|+||.++.|-.+++-...+ ||||++|+.|||||||||+.+...                    
T Consensus        26 ~devs~rIigGs~Anag~~P~~VaLv~~isd~~s~tfCGgs~l~~RYvLTAAHC~~~~s~is~d~~~vv~~l~d~Sq~~r  105 (413)
T COG5640          26 ADEVSSRIIGGSNANAGEYPSLVALVDRISDYVSGTFCGGSKLGGRYVLTAAHCADASSPISSDVNRVVVDLNDSSQAER  105 (413)
T ss_pred             ccccceeEecCcccccccCchHHHHHhhcccccceeEeccceecceEEeeehhhccCCCCccccceEEEecccccccccC
Confidence            33458999999999999999998887544432333 999999999999999999886421                    


Q ss_pred             -ceeeeeeccc----------------------------cc---------------ccccccccccCCC---CC--CCce
Q psy12777        615 -QIIPIIQNCR----------------------------RR---------------ESNLWKMALADGP---LP--SVLQ  645 (697)
Q Consensus       615 -~~i~~~~~~~----------------------------~~---------------~~~~Wg~~~~~~~---~s--~vLq  645 (697)
                       ++..++.||-                            .+               ....|++..+...   .+  ..|+
T Consensus       106 g~vr~i~~~efY~~~n~~ND~Av~~l~~~a~~pr~ki~~~~~sdt~l~sv~~~s~~~n~t~~~~~~~~v~~~~p~gt~l~  185 (413)
T COG5640         106 GHVRTIYVHEFYSPGNLGNDIAVLELARAASLPRVKITSFDASDTFLNSVTTVSPMTNGTFGVTTPSDVPRSSPKGTILH  185 (413)
T ss_pred             cceEEEeeecccccccccCcceeeccccccccchhheeeccCcccceecccccccccceeeeeeeecCCCCCCCccceee
Confidence             0111111110                            00               0113777655432   23  3799


Q ss_pred             EEEEeeechhHHHHHhhhCCcc---cCcCCCeEEEeeCCCCCCCCcccCCCCCCC
Q psy12777        646 EVSVPVINNSLCETMYRAAGFI---EHIPEIFICAGWRKGSFDSCEEHARDGTDW  697 (697)
Q Consensus       646 ~~~V~vis~~~C~~~y~~~~~~---~~i~~~~ICAG~~~g~~dtCqGDSGgg~~~  697 (697)
                      ++.|...+..+|.+.+......   ..++.  ||||..  ..|+|||||||++-|
T Consensus       186 e~~v~fv~~stc~~~~g~an~~dg~~~lT~--~cag~~--~~daCqGDSGGPi~~  236 (413)
T COG5640         186 EVAVLFVPLSTCAQYKGCANASDGATGLTG--FCAGRP--PKDACQGDSGGPIFH  236 (413)
T ss_pred             eeeeeeechHHhhhhccccccCCCCCCccc--eecCCC--CcccccCCCCCceEE
Confidence            9999999999999877311111   12222  999954  489999999999865

>COG3591 V8-like Glu-specific endopeptidase [Amino acid transport and metabolism]

Probab=97.09  E-value=0.0016  Score=68.32  Aligned_cols=123  Identities=13%  Similarity=0.129  Sum_probs=71.8

Q ss_pred             CCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCC--ceEEEE-ccccCCCCCCCCCcEEEEEEEEEE
Q psy12777        397 ATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS--DLLLRL-GEHDLSTEEEPYGYQERRVQIVAS  473 (697)
Q Consensus       397 A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~--~l~V~L-G~~dl~~~~~~~~~q~~~V~~Iii  473 (697)
                      .....|||-+-..+... .+..-|+++||+++-||||+||+......  ++.+.. |...   ...  +.-.+....+..
T Consensus        44 ~dt~~~Py~av~~~~~~-tG~~~~~~~lI~pntvLTa~Hc~~s~~~G~~~~~~~p~g~~~---~~~--~~~~~~~~~~~~  117 (251)
T COG3591          44 TDTTQFPYSAVVQFEAA-TGRLCTAATLIGPNTVLTAGHCIYSPDYGEDDIAAAPPGVNS---DGG--PFYGITKIEIRV  117 (251)
T ss_pred             ccCCCCCcceeEEeecC-CCcceeeEEEEcCceEEEeeeEEecCCCChhhhhhcCCcccC---CCC--CCCceeeEEEEe
Confidence            34467999776654332 34556788999999999999999864322  222222 2111   111  111122222222


Q ss_pred             CCC--CCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        474 HPQ--FDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       474 HP~--Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                      .+.  |.......|+..+.|+....+.+.+...-++.......++...++|+=.
T Consensus       118 ~~g~~~~~d~~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~i~v~GYP~  171 (251)
T COG3591         118 YPGELYKEDGASYDVGEAALESGINIGDVVNYLKRNTASEAKANDRITVIGYPG  171 (251)
T ss_pred             cCCceeccCCceeeccHHHhccCCCccccccccccccccccccCceeEEEeccC
Confidence            332  3455566788888887666666666655566555555677788999733

>PF13365 Trypsin_2: Trypsin-like peptidase domain; PDB: 1Y8T_A 2Z9I_A 3QO6_A 1L1J_A 1QY6_A 2O8L_A 3OTP_E 2ZLE_I 1KY9_A 3CS0_A

Probab=96.91  E-value=0.0027  Score=56.54  Aligned_cols=21  Identities=38%  Similarity=0.472  Sum_probs=19.1

Q ss_pred             eeEEEeeCc-ceeeecccccCC
Q psy12777        420 CGAALFNEN-WAVTAAHCVEDV  440 (697)
Q Consensus       420 CGGTLIS~r-wVLTAAHC~~~~  440 (697)
                      |.|.||+++ +|||||||+...
T Consensus         1 GTGf~i~~~g~ilT~~Hvv~~~   22 (120)
T PF13365_consen    1 GTGFLIGPDGYILTAAHVVEDW   22 (120)
T ss_dssp             EEEEEEETTTEEEEEHHHHTCC
T ss_pred             CEEEEEcCCceEEEchhheecc
Confidence            689999999 999999999864

...

>TIGR02037 degP_htrA_DO periplasmic serine protease, Do/DeqQ family

Probab=96.08  E-value=0.032  Score=62.51  Aligned_cols=85  Identities=19%  Similarity=0.288  Sum_probs=57.5

Q ss_pred             eeeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccc
Q psy12777        417 LHKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV  495 (697)
Q Consensus       417 ~~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV  495 (697)
                      ...+.|.+|++. +|||++|++.+  ...+.|.+..           ...+..+-+..++.       +||||||++.+ 
T Consensus        57 ~~~GSGfii~~~G~IlTn~Hvv~~--~~~i~V~~~~-----------~~~~~a~vv~~d~~-------~DlAllkv~~~-  115 (428)
T TIGR02037        57 RGLGSGVIISADGYILTNNHVVDG--ADEITVTLSD-----------GREFKAKLVGKDPR-------TDIAVLKIDAK-  115 (428)
T ss_pred             cceeeEEEECCCCEEEEcHHHcCC--CCeEEEEeCC-----------CCEEEEEEEEecCC-------CCEEEEEecCC-
Confidence            346999999976 99999999976  3456665531           12233443334443       59999999754 


Q ss_pred             ccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       496 ~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                         ..+.++.|........|+.+++.|+-.
T Consensus       116 ---~~~~~~~l~~~~~~~~G~~v~aiG~p~  142 (428)
T TIGR02037       116 ---KNLPVIKLGDSDKLRVGDWVLAIGNPF  142 (428)
T ss_pred             ---CCceEEEccCCCCCCCCCEEEEEECCC
Confidence               345677776554444699999999743

This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures.

>PF09342 DUF1986: Domain of unknown function (DUF1986); InterPro: IPR015420 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.93  E-value=0.028  Score=58.93  Aligned_cols=38  Identities=18%  Similarity=0.602  Sum_probs=34.2

Q ss_pred             CCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        571 FGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       571 ~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      -..|||.|.++.    .|.++|.|.||++.|||++-.|+.+.
T Consensus        13 ~y~WPWlA~IYv----dG~~~CsgvLlD~~WlLvsssCl~~I   50 (267)
T PF09342_consen   13 DYHWPWLADIYV----DGRYWCSGVLLDPHWLLVSSSCLRGI   50 (267)
T ss_pred             cccCcceeeEEE----cCeEEEEEEEeccceEEEeccccCCc
Confidence            356999999984    78899999999999999999999874

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found in serine endopeptidases belonging to MEROPS peptidase family S1A (clan PA). It is found in unusual mosaic proteins, which are encoded by the Drosophila nudel gene (see P98159 from SWISSPROT). Nudel is involved in defining embryonic dorsoventral polarity. Three proteases; ndl, gd and snk process easter to create active easter. Active easter defines cell identities along the dorsal-ventral continuum by activating the spz ligand for the Tl receptor in the ventral region of the embryo. Nudel, pipe and windbeutel together trigger the protease cascade within the extraembryonic perivitelline compartment which induces dorsoventral polarity of the Drosophila embryo [].

>PF03761 DUF316: Domain of unknown function (DUF316) ; InterPro: IPR005514 This is a family of uncharacterised proteins from Caenorhabditis elegans

Probab=94.88  E-value=0.036  Score=58.10  Aligned_cols=51  Identities=24%  Similarity=0.378  Sum_probs=44.4

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      ..++.+|..+..+..||.+.+.........+++.|+||++|-||||+||+-
T Consensus        39 ~~~~~~g~~~~~~~~pW~v~v~~~~~~~~~~~~~gtlIS~RHiLtss~~~~   89 (282)
T PF03761_consen   39 PSKVFNGTPAESGEAPWAVSVYTKNHNEGNYFSTGTLISPRHILTSSHCVM   89 (282)
T ss_pred             cccccCCcccccCCCCCEEEEEeccCcccceecceEEeccCeEEEeeeEEE
Confidence            455688999999999999999876666667889999999999999999976

>TIGR02038 protease_degS periplasmic serine pepetdase DegS

Probab=94.22  E-value=0.5  Score=51.98  Aligned_cols=83  Identities=19%  Similarity=0.270  Sum_probs=52.7

Q ss_pred             eeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        418 HKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       418 ~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      ....|.+|+++ +|||++|.+.+  ...+.|.+..           ...+..+-+..++       .+||||||++..- 
T Consensus        78 ~~GSG~vi~~~G~IlTn~HVV~~--~~~i~V~~~d-----------g~~~~a~vv~~d~-------~~DlAvlkv~~~~-  136 (351)
T TIGR02038        78 GLGSGVIMSKEGYILTNYHVIKK--ADQIVVALQD-----------GRKFEAELVGSDP-------LTDLAVLKIEGDN-  136 (351)
T ss_pred             ceEEEEEEeCCeEEEecccEeCC--CCEEEEEECC-----------CCEEEEEEEEecC-------CCCEEEEEecCCC-
Confidence            35889999876 99999999975  3456665421           1223344343443       3699999997531 


Q ss_pred             cCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        497 FQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       497 fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                          +.++.|-.......|+.+.+.|+..
T Consensus       137 ----~~~~~l~~s~~~~~G~~V~aiG~P~  161 (351)
T TIGR02038       137 ----LPTIPVNLDRPPHVGDVVLAIGNPY  161 (351)
T ss_pred             ----CceEeccCcCccCCCCEEEEEeCCC
Confidence                3344453333333699999999853

This family consists of the periplasmic serine protease DegS (HhoB), a shorter paralog of protease DO (HtrA, DegP) and DegQ (HhoA). It is found in E. coli and several other Proteobacteria of the gamma subdivision. It contains a trypsin domain and a single copy of PDZ domain (in contrast to DegP with two copies). A critical role of this DegS is to sense stress in the periplasm and partially degrade an inhibitor of sigma(E).

>PRK10139 serine endoprotease; Provisional

Probab=93.46  E-value=0.41  Score=54.61  Aligned_cols=82  Identities=20%  Similarity=0.369  Sum_probs=54.0

Q ss_pred             eeeeEEEeeC--cceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccc
Q psy12777        418 HKCGAALFNE--NWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV  495 (697)
Q Consensus       418 ~~CGGTLIS~--rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV  495 (697)
                      ....|.+|++  .+|||.+|.+.+  ...+.|.+..           ...+..+-+...+       ..||||||++.+-
T Consensus        90 ~~GSG~ii~~~~g~IlTn~HVv~~--a~~i~V~~~d-----------g~~~~a~vvg~D~-------~~DlAvlkv~~~~  149 (455)
T PRK10139         90 GLGSGVIIDAAKGYVLTNNHVINQ--AQKISIQLND-----------GREFDAKLIGSDD-------QSDIALLQIQNPS  149 (455)
T ss_pred             ceEEEEEEECCCCEEEeChHHhCC--CCEEEEEECC-----------CCEEEEEEEEEcC-------CCCEEEEEecCCC
Confidence            3588999974  699999999976  4567777631           1223333333333       3699999997542


Q ss_pred             ccCCCeeeeecCCCCCCCCCCEEEEEec
Q psy12777        496 KFQPNIIPICVPEDDTNFVGTSAHVTGW  523 (697)
Q Consensus       496 ~fs~~V~PICLP~~~~~~~G~~c~VtGW  523 (697)
                          ...++.|-.......|+.+.+.|.
T Consensus       150 ----~l~~~~lg~s~~~~~G~~V~aiG~  173 (455)
T PRK10139        150 ----KLTQIAIADSDKLRVGDFAVAVGN  173 (455)
T ss_pred             ----CCceeEecCccccCCCCEEEEEec
Confidence                344666655444336888888886

>PRK10942 serine endoprotease; Provisional

Probab=93.12  E-value=0.47  Score=54.34  Aligned_cols=82  Identities=20%  Similarity=0.381  Sum_probs=52.1

Q ss_pred             eeeeEEEeeC--cceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccc
Q psy12777        418 HKCGAALFNE--NWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV  495 (697)
Q Consensus       418 ~~CGGTLIS~--rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV  495 (697)
                      ....|.||+.  -+|||.+|.+.+  ...+.|.+..           ...+..+-+..++       ..||||||++.+-
T Consensus       111 ~~GSG~ii~~~~G~IlTn~HVv~~--a~~i~V~~~d-----------g~~~~a~vv~~D~-------~~DlAvlki~~~~  170 (473)
T PRK10942        111 ALGSGVIIDADKGYVVTNNHVVDN--ATKIKVQLSD-----------GRKFDAKVVGKDP-------RSDIALIQLQNPK  170 (473)
T ss_pred             ceEEEEEEECCCCEEEeChhhcCC--CCEEEEEECC-----------CCEEEEEEEEecC-------CCCEEEEEecCCC
Confidence            3588999985  599999999976  4567776531           1223333333444       3699999986432


Q ss_pred             ccCCCeeeeecCCCCCCCCCCEEEEEec
Q psy12777        496 KFQPNIIPICVPEDDTNFVGTSAHVTGW  523 (697)
Q Consensus       496 ~fs~~V~PICLP~~~~~~~G~~c~VtGW  523 (697)
                      .    +.++-|-..+....|+.+.+.|.
T Consensus       171 ~----l~~~~lg~s~~l~~G~~V~aiG~  194 (473)
T PRK10942        171 N----LTAIKMADSDALRVGDYTVAIGN  194 (473)
T ss_pred             C----CceeEecCccccCCCCEEEEEcC
Confidence            2    34555654443336888888775

>PRK10898 serine endoprotease; Provisional

Probab=92.96  E-value=1.1  Score=49.33  Aligned_cols=82  Identities=17%  Similarity=0.280  Sum_probs=51.5

Q ss_pred             eeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        418 HKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       418 ~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      ....|.+|+++ +|||++|=+.+  ...+.|.+..           ...+...-+...+       .+||||||++..  
T Consensus        78 ~~GSGfvi~~~G~IlTn~HVv~~--a~~i~V~~~d-----------g~~~~a~vv~~d~-------~~DlAvl~v~~~--  135 (353)
T PRK10898         78 TLGSGVIMDQRGYILTNKHVIND--ADQIIVALQD-----------GRVFEALLVGSDS-------LTDLAVLKINAT--  135 (353)
T ss_pred             ceeeEEEEeCCeEEEecccEeCC--CCEEEEEeCC-----------CCEEEEEEEEEcC-------CCCEEEEEEcCC--
Confidence            45789999876 99999998875  3456666531           1223333333333       369999999753  


Q ss_pred             cCCCeeeeecCCCCCCCCCCEEEEEecc
Q psy12777        497 FQPNIIPICVPEDDTNFVGTSAHVTGWG  524 (697)
Q Consensus       497 fs~~V~PICLP~~~~~~~G~~c~VtGWG  524 (697)
                         ...++.|-.......|+.+.+.|+-
T Consensus       136 ---~l~~~~l~~~~~~~~G~~V~aiG~P  160 (353)
T PRK10898        136 ---NLPVIPINPKRVPHIGDVVLAIGNP  160 (353)
T ss_pred             ---CCCeeeccCcCcCCCCCEEEEEeCC
Confidence               1233444433333368999998874

>COG3591 V8-like Glu-specific endopeptidase [Amino acid transport and metabolism]

Probab=85.90  E-value=0.7  Score=48.95  Aligned_cols=38  Identities=26%  Similarity=0.410  Sum_probs=28.8

Q ss_pred             cccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        573 KWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       573 ~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      .|||-+=. ++....|.+-|.++||+++-|||||||...
T Consensus        48 ~~Py~av~-~~~~~tG~~~~~~~lI~pntvLTa~Hc~~s   85 (251)
T COG3591          48 QFPYSAVV-QFEAATGRLCTAATLIGPNTVLTAGHCIYS   85 (251)
T ss_pred             CCCcceeE-EeecCCCcceeeEEEEcCceEEEeeeEEec
Confidence            38887655 445555555666799999999999999774

>PF13365 Trypsin_2: Trypsin-like peptidase domain; PDB: 1Y8T_A 2Z9I_A 3QO6_A 1L1J_A 1QY6_A 2O8L_A 3OTP_E 2ZLE_I 1KY9_A 3CS0_A

Probab=85.89  E-value=0.46  Score=42.11  Aligned_cols=21  Identities=38%  Similarity=0.502  Sum_probs=18.8

Q ss_pred             eeeeEeeCc-EEEeeccccccc
Q psy12777        592 CGAALFNEN-WAVTAAHCVEDL  612 (697)
Q Consensus       592 CgGslI~~~-~VLSAAHC~~~~  612 (697)
                      |-|.||+++ +|||||||+++.
T Consensus         1 GTGf~i~~~g~ilT~~Hvv~~~   22 (120)
T PF13365_consen    1 GTGFLIGPDGYILTAAHVVEDW   22 (120)
T ss_dssp             EEEEEEETTTEEEEEHHHHTCC
T ss_pred             CEEEEEcCCceEEEchhheecc
Confidence            569999999 999999999864

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	697
3p8g_A	241	Crystal Structure Of Mt-Sp1 In Complex With Benzami		7e-23
3p8g_A	241	Crystal Structure Of Mt-Sp1 In Complex With Benzami		2e-06
1eaw_A	241	Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (A		7e-23
1eaw_A	241	Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (A		2e-06
3bn9_B	241	Crystal Structure Of Mt-Sp1 In Complex With Fab Inh		8e-22
3bn9_B	241	Crystal Structure Of Mt-Sp1 In Complex With Fab Inh		2e-06
2cga_A	245	Bovine Chymotrypsinogen A. X-Ray Crystal Structure		7e-20
2cga_A	245	Bovine Chymotrypsinogen A. X-Ray Crystal Structure		5e-10
2f91_A	237	1.2a Resolution Structure Of A Crayfish Trypsin Com		2e-19
2f91_A	237	1.2a Resolution Structure Of A Crayfish Trypsin Com		1e-08
1ym0_A	238	Crystal Structure Of Earthworm Fibrinolytic Enzyme		5e-19
1ym0_A	238	Crystal Structure Of Earthworm Fibrinolytic Enzyme		2e-05
2jet_B	128	Crystal Structure Of A Trypsin-Like Mutant (S189d,		2e-18
2jet_B	128	Crystal Structure Of A Trypsin-Like Mutant (S189d,		3e-07
1kdq_A	131	Crystal Structure Analysis Of The Mutant S189d Rat		3e-18
1kdq_A	131	Crystal Structure Analysis Of The Mutant S189d Rat		3e-08
1mtn_B	131	Bovine Alpha-Chymotrypsin:bpti Crystallization Leng		1e-17
1mtn_B	131	Bovine Alpha-Chymotrypsin:bpti Crystallization Leng		1e-09
1dlk_B	230	Crystal Structure Analysis Of Delta-Chymotrypsin Bo		1e-17
1dlk_B	230	Crystal Structure Analysis Of Delta-Chymotrypsin Bo		2e-09
2wph_S	235	Factor Ixa Superactive Triple Mutant Length = 235		3e-17
2wph_S	235	Factor Ixa Superactive Triple Mutant Length = 235		4e-06
2wpm_S	235	Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Le		3e-17
2wpm_S	235	Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Le		4e-06
2bq6_B	249	Crystal Structure Of Factor Xa In Complex With 21 L		4e-17
2wpi_S	235	Factor Ixa Superactive Double Mutant Length = 235		6e-17
2wpi_S	235	Factor Ixa Superactive Double Mutant Length = 235		4e-06
1z8g_A	372	Crystal Structure Of The Extracellular Region Of Th		1e-16
1z8g_A	372	Crystal Structure Of The Extracellular Region Of Th		3e-08
3t2n_A	372	Human Hepsin Protease In Complex With The Fab Fragm		1e-16
3t2n_A	372	Human Hepsin Protease In Complex With The Fab Fragm		3e-08
3ela_H	254	Crystal Structure Of Active Site Inhibited Coagulat		2e-16
1dan_H	254	Complex Of Active Site Inhibited Human Blood Coagul		2e-16
1pyt_D	251	Ternary Complex Of Procarboxypeptidase A, Proprotei		3e-16
1pyt_D	251	Ternary Complex Of Procarboxypeptidase A, Proprotei		6e-08
1rfn_A	235	Human Coagulation Factor Ixa In Complex With P-Amin		3e-16
1rfn_A	235	Human Coagulation Factor Ixa In Complex With P-Amin		4e-06
1mq5_A	233	Crystal Structure Of 3-chloro-n-[4-chloro-2-[[(4-ch		3e-16
1xka_C	235	Factor Xa Complexed With A Synthetic Inhibitor Fx-2		3e-16
1fjs_A	234	Crystal Structure Of The Inhibitor Zk-807834 (Ci-10		3e-16
2y5f_A	234	Factor Xa - Cation Inhibitor Complex Length = 234		3e-16
3kcg_H	235	Crystal Structure Of The Antithrombin-Factor Ixa- P		3e-16
3kcg_H	235	Crystal Structure Of The Antithrombin-Factor Ixa- P		4e-06
1hcg_A	241	Structure Of Human Des(1-45) Factor Xa At 2.2 Angst		3e-16
2bok_A	241	Factor Xa- Cation Length = 241		3e-16
2gd4_H	241	Crystal Structure Of The Antithrombin-S195a Factor		3e-16
3ens_B	238	Crystal Structure Of Human Fxa In Complex With Meth		3e-16
1pfx_C	235	Porcine Factor Ixa Length = 235		4e-16
1pfx_C	235	Porcine Factor Ixa Length = 235		2e-06
1ezq_A	254	Crystal Structure Of Human Coagulation Factor Xa Co		4e-16
1c5m_D	255	Structural Basis For Selectivity Of A Small Molecul		4e-16
1kig_H	241	Bovine Factor Xa Length = 241		5e-16
1md8_A	329	Monomeric Structure Of The Active Catalytic Domain		6e-16
4h4f_A	249	Crystal Structure Of Human Chymotrypsin C (ctrc) Bo		6e-16
4h4f_A	249	Crystal Structure Of Human Chymotrypsin C (ctrc) Bo		5e-07
1mh0_A	287	Crystal Structure Of The Anticoagulant Slow Form Of		7e-16
1mh0_A	287	Crystal Structure Of The Anticoagulant Slow Form Of		6e-04
1md7_A	328	Monomeric Structure Of The Zymogen Of Complement Pr		7e-16
1bru_P	241	Structure Of Porcine Pancreatic Elastase Complexed		8e-16
1bru_P	241	Structure Of Porcine Pancreatic Elastase Complexed		6e-07
1d6w_A	287	Structure Of Thrombin Complexed With Selective Non-		9e-16
1d6w_A	287	Structure Of Thrombin Complexed With Selective Non-		6e-04
1eoj_A	289	Design Of P1' And P3' Residues Of Trivalent Thrombi		9e-16
1eoj_A	289	Design Of P1' And P3' Residues Of Trivalent Thrombi		6e-04
1nm6_A	287	Thrombin In Complex With Selective Macrocyclic Inhi		9e-16
1nm6_A	287	Thrombin In Complex With Selective Macrocyclic Inhi		6e-04
1d9i_A	288	Structure Of Thrombin Complexed With Selective Non-		9e-16
1d9i_A	288	Structure Of Thrombin Complexed With Selective Non-		6e-04
2bdy_A	289	Thrombin In Complex With Inhibitor Length = 289		9e-16
2bdy_A	289	Thrombin In Complex With Inhibitor Length = 289		6e-04
1nu9_A	291	Staphylocoagulase-prethrombin-2 Complex Length = 29		1e-15
1nu9_A	291	Staphylocoagulase-prethrombin-2 Complex Length = 29		6e-04
1hag_E	295	The Isomorphous Structures Of Prethrombin2, Hirugen		1e-15
1hag_E	295	The Isomorphous Structures Of Prethrombin2, Hirugen		6e-04
3sqe_E	290	Crystal Structure Of Prethrombin-2 Mutant S195a In		1e-15
3sqe_E	290	Crystal Structure Of Prethrombin-2 Mutant S195a In		6e-04
1aut_C	250	Human Activated Protein C Length = 250		1e-15
3f6u_H	240	Crystal Structure Of Human Activated Protein C (Apc		1e-15
3k65_B	308	Crystal Structure Of Prethombin-2FRAGMENT-2 Complex		1e-15
3k65_B	308	Crystal Structure Of Prethombin-2FRAGMENT-2 Complex		6e-04
1jwt_A	305	Crystal Structure Of Thrombin In Complex With A Nov		1e-15
1jwt_A	305	Crystal Structure Of Thrombin In Complex With A Nov		5e-04
1h8i_H	253	X-Ray Crystal Structure Of Human Alpha-Thrombin Wit		1e-15
1dm4_B	260	Ser195ala Mutant Of Human Thrombin Complexed With F		1e-15
3nxp_A	424	Crystal Structure Of Human Prethrombin-1 Length = 4		1e-15
3nxp_A	424	Crystal Structure Of Human Prethrombin-1 Length = 4		6e-04
2f83_A	625	Crystal Structure At 2.9 Angstroms Resolution Of Hu		1e-15
2f83_A	625	Crystal Structure At 2.9 Angstroms Resolution Of Hu		6e-06
1fax_A	254	Coagulation Factor Xa Inhibitor Complex Length = 25		2e-15
1gpz_A	399	The Crystal Structure Of The Zymogen Catalytic Doma		2e-15
2a0q_B	257	Structure Of Thrombin In 400 Mm Potassium Chloride		3e-15
1sfq_B	259	Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack		3e-15
2od3_B	259	Human Thrombin Chimera With Human Residues 184a, 18		4e-15
1bhx_B	147	X-Ray Structure Of The Complex Of Human Alpha Throm		4e-15
1tq0_B	257	Crystal Structure Of The Potent Anticoagulant Throm		4e-15
3r3g_B	259	Structure Of Human Thrombin With Residues 145-150 O		4e-15
1h8d_H	260	X-Ray Structure Of The Human Alpha-Thrombin Complex		4e-15
1b7x_B	259	Structure Of Human Alpha-Thrombin Y225i Mutant Boun		4e-15
1qur_H	257	Human Alpha-Thrombin In Complex With Bivalent, Benz		4e-15
3ee0_B	259	Crystal Structure Of The W215aE217A MUTANT OF HUMAN		4e-15
1z8i_B	259	Crystal Structure Of The Thrombin Mutant G193a Boun		5e-15
1twx_B	259	Crystal Structure Of The Thrombin Mutant D221aD222K		5e-15
1abi_H	259	Structure Of The Hirulog 3-Thrombin Complex And Nat		5e-15
1wbg_B	259	Active Site Thrombin Inhibitors Length = 259		5e-15
1bth_H	259	Structure Of Thrombin Complexed With Bovine Pancrea		5e-15
1rd3_B	259	2.5a Structure Of Anticoagulant Thrombin Variant E2		5e-15
1gj5_H	258	Selectivity At S1, H2o Displacement, Upa, Tpa, Ser1		5e-15
2thf_B	259	Structure Of Human Alpha-thrombin Y225f Mutant Boun		5e-15
1jou_B	259	Crystal Structure Of Native S195a Thrombin With An		5e-15
1z8j_B	259	Crystal Structure Of The Thrombin Mutant G193p Boun		5e-15
2pgb_B	259	Inhibitor-Free Human Thrombin Mutant C191a-C220a Le		5e-15
2bvr_H	252	Human Thrombin Complexed With Fragment-based Small		5e-15
1thp_B	259	Structure Of Human Alpha-Thrombin Y225p Mutant Boun		5e-15
1vzq_H	250	Complex Of Thrombin With Designed Inhibitor 7165 Le		5e-15
1dx5_M	259	Crystal Structure Of The Thrombin-Thrombomodulin Co		5e-15
2xxl_A	408	Crystal Structure Of Drosophila Grass Clip Serine P		7e-15
1zhm_A	238	Crystal Structure Of The Catalytic Domain Of The Co		8e-15
1zhm_A	238	Crystal Structure Of The Catalytic Domain Of The Co		4e-05
2any_A	241	Expression, Crystallization And The Three-Dimension		8e-15
2any_A	241	Expression, Crystallization And The Three-Dimension		7e-11
3jz1_B	259	Crystal Structure Of Human Thrombin Mutant N143p In		8e-15
1xx9_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		8e-15
1xx9_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		4e-05
4igd_A	406	Crystal Structure Of The Zymogen Catalytic Region O		9e-15
2zeb_A	243	Potent, Nonpeptide Inhibitors Of Human Mast Cell Tr		9e-15
2zeb_A	243	Potent, Nonpeptide Inhibitors Of Human Mast Cell Tr		1e-07
1a0l_A	244	Human Beta-Tryptase: A Ring-Like Tetramer With Acti		1e-14
1a0l_A	244	Human Beta-Tryptase: A Ring-Like Tetramer With Acti		2e-07
2bm2_A	245	Human Beta-Ii Tryptase In Complex With 4-(3-Aminome		1e-14
2bm2_A	245	Human Beta-Ii Tryptase In Complex With 4-(3-Aminome		1e-07
1zhp_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		1e-14
1zhp_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		4e-05
1xxd_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		1e-14
1xxd_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		4e-05
2anw_A	241	Expression, Crystallization And Three-Dimensional S		1e-14
2anw_A	241	Expression, Crystallization And Three-Dimensional S		9e-11
3gic_B	250	Structure Of Thrombin Mutant Delta(146-149e) In The		1e-14
3edx_B	258	Crystal Structure Of The W215aE217A MUTANT OF MURIN		1e-14
2pux_B	258	Crystal Structure Of Murine Thrombin In Complex Wit		1e-14
1vr1_H	261	Specifity For Plasminogen Activator Inhibitor-1 Len		1e-14
1elt_A	236	Structure Of Native Pancreatic Elastase From North		1e-14
1elt_A	236	Structure Of Native Pancreatic Elastase From North		4e-08
2ocv_B	259	Structural Basis Of Na+ Activation Mimicry In Murin		1e-14
2gp9_B	259	Crystal Structure Of The Slow Form Of Thrombin In A		2e-14
1eai_A	240	Complex Of Ascaris Chymotrpsin/elastase Inhibitor W		2e-14
1eai_A	240	Complex Of Ascaris Chymotrpsin/elastase Inhibitor W		6e-07
3dfj_A	263	Crystal Structure Of Human Prostasin Length = 263		3e-14
3dfj_A	263	Crystal Structure Of Human Prostasin Length = 263		7e-06
2est_E	240	Crystallographic Study Of The Binding Of A Trifluor		3e-14
2est_E	240	Crystallographic Study Of The Binding Of A Trifluor		6e-07
2qy0_B	242	Active Dimeric Structure Of The Catalytic Domain Of		4e-14
2f9o_A	245	Crystal Structure Of The Recombinant Human Alpha I		4e-14
2f9o_A	245	Crystal Structure Of The Recombinant Human Alpha I		3e-08
3gyl_B	261	Structure Of Prostasin At 1.3 Angstroms Resolution		4e-14
3gyl_B	261	Structure Of Prostasin At 1.3 Angstroms Resolution		6e-06
3e0p_B	271	The X-Ray Structure Of Human Prostasin In Complex W		4e-14
3e0p_B	271	The X-Ray Structure Of Human Prostasin In Complex W		6e-06
2f9n_A	245	Crystal Structure Of The Recombinant Human Alpha I		4e-14
2f9n_A	245	Crystal Structure Of The Recombinant Human Alpha I		3e-08
1co7_E	245	R117h Mutant Rat Anionic Trypsin Complexed With Bov		4e-14
1co7_E	245	R117h Mutant Rat Anionic Trypsin Complexed With Bov		4e-04
1lto_A	245	Human Alpha1-Tryptase Length = 245		4e-14
1lto_A	245	Human Alpha1-Tryptase Length = 245		7e-08
2b9l_A	394	Crystal Structure Of Prophenoloxidase Activating Fa		5e-14
1mkw_K	308	The Co-Crystal Structure Of Unliganded Bovine Alpha		5e-14
1mkw_K	308	The Co-Crystal Structure Of Unliganded Bovine Alpha		6e-04
3tgj_E	233	S195a Trypsinogen Complexed With Bovine Pancreatic		6e-14
1hax_B	240	Snapshots Of Serine Protease Catalysis: (A) Acyl-En		7e-14
1hax_B	240	Snapshots Of Serine Protease Catalysis: (A) Acyl-En		5e-07
1zpz_A	238	Factor Xi Catalytic Domain Complexed With N-((R)-1-		8e-14
1zpz_A	238	Factor Xi Catalytic Domain Complexed With N-((R)-1-		3e-05
3gov_B	251	Crystal Structure Of The Catalytic Region Of Human		9e-14
1zlr_A	237	Factor Xi Catalytic Domain Complexed With 2-Guanidi		1e-13
1zlr_A	237	Factor Xi Catalytic Domain Complexed With 2-Guanidi		4e-05
1zhr_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		1e-13
1zhr_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		4e-05
3sor_A	238	Factor Xia In Complex With A Clorophenyl-tetrazole		1e-13
3sor_A	238	Factor Xia In Complex With A Clorophenyl-tetrazole		3e-05
1f7z_A	233	Rat Trypsinogen K15a Complexed With Bovine Pancreat		1e-13
1zjd_A	237	Crystal Structure Of The Catalytic Domain Of Coagul		1e-13
1zjd_A	237	Crystal Structure Of The Catalytic Domain Of Coagul		4e-05
1bbr_H	150	The Structure Of Residues 7-16 Of The A Alpha Chain		1e-13
1slw_B	223	Rat Anionic N143h, E151h Trypsin Complexed To A86h		2e-13
1id5_H	256	Crystal Structure Of Bovine Thrombin Complex With P		2e-13
1anc_A	223	Anionic Trypsin Mutant With Ser 214 Replaced By Lys		2e-13
1k9o_E	223	Crystal Structure Of Michaelis Serpin-Trypsin Compl		2e-13
1bbr_K	259	The Structure Of Residues 7-16 Of The A Alpha Chain		2e-13
3tgi_E	223	Wild-Type Rat Anionic Trypsin Complexed With Bovine		3e-13
1brb_E	223	Crystal Structures Of Rat Anionic Trypsin Complexed		3e-13
1slx_B	223	Rat Anionic N143h, E151h Trypsin Complexed To A86h		3e-13
1anb_A	223	Anionic Trypsin Mutant With Ser 214 Replaced By Glu		3e-13
1dpo_A	223	Structure Of Rat Trypsin Length = 223		3e-13
1and_A	223	Anionic Trypsin Mutant With Arg 96 Replaced By His		3e-13
1ekb_B	235	The Serine Protease Domain Of Enteropeptidase Bound		3e-13
1amh_A	223	Uncomplexed Rat Trypsin Mutant With Asp 189 Replace		3e-13
1j15_A	223	Benzamidine In Complex With Rat Trypsin Mutant X991		3e-13
1ql9_A	223	Factor Xa Specific Inhibitor In Complex With Rat Tr		3e-13
1fdp_A	235	Proenzyme Of Human Complement Factor D, Recombinant		3e-13
3bg8_A	238	Crystal Structure Of Factor Xia In Complex With Cla		4e-13
3bg8_A	238	Crystal Structure Of Factor Xia In Complex With Cla		3e-05
1bui_B	250	Structure Of The Ternary Microplasmin-Staphylokinas		5e-13
1bui_B	250	Structure Of The Ternary Microplasmin-Staphylokinas		1e-05
1bml_A	250	Complex Of The Catalytic Domain Of Human Plasmin An		5e-13
1bml_A	250	Complex Of The Catalytic Domain Of Human Plasmin An		1e-05
3uir_A	247	Crystal Structure Of The Plasmin-Textilinin-1 Compl		5e-13
3uir_A	247	Crystal Structure Of The Plasmin-Textilinin-1 Compl		1e-05
1ddj_A	247	Crystal Structure Of Human Plasminogen Catalytic Do		5e-13
1ddj_A	247	Crystal Structure Of Human Plasminogen Catalytic Do		1e-05
1l4d_A	249	Crystal Structure Of Microplasminogen-streptokinase		6e-13
1l4d_A	249	Crystal Structure Of Microplasminogen-streptokinase		1e-05
1l4z_A	248	X-Ray Crystal Structure Of The Complex Of Microplas		6e-13
1l4z_A	248	X-Ray Crystal Structure Of The Complex Of Microplas		1e-05
1fxy_A	228	Coagulation Factor Xa-Trypsin Chimera Inhibited Wit		6e-13
4dur_A	791	The X-Ray Crystal Structure Of Full-Length Type Ii		6e-13
4dur_A	791	The X-Ray Crystal Structure Of Full-Length Type Ii		8e-06
1eq9_A	222	Crystal Structure Of Fire Ant Chymotrypsin Complexe		7e-13
1eq9_A	222	Crystal Structure Of Fire Ant Chymotrypsin Complexe		1e-06
1qrz_A	246	Catalytic Domain Of Plasminogen Length = 246		9e-13
1qrz_A	246	Catalytic Domain Of Plasminogen Length = 246		2e-05
1trm_A	223	The Three-Dimensional Structure Of Asn102 Mutant Of		1e-12
1ezs_C	223	Crystal Structure Of Ecotin Mutant M84r, W67a, G68a		1e-12
1aks_A	125	Crystal Structure Of The First Active Autolysate Fo		2e-12
1rjx_B	247	Human Plasminogen Catalytic Domain, K698m Mutant Le		2e-12
1rjx_B	247	Human Plasminogen Catalytic Domain, K698m Mutant Le		4e-05
1o5e_H	255	Dissecting And Designing Inhibitor Selectivity Dete		2e-12
1o5e_H	255	Dissecting And Designing Inhibitor Selectivity Dete		1e-06
1f5r_A	231	Rat Trypsinogen Mutant Complexed With Bovine Pancre		2e-12
1fy8_E	231	Crystal Structure Of The Deltaile16val17 Rat Anioni		2e-12
3tgk_E	231	Trypsinogen Mutant D194n And Deletion Of Ile 16-Val		3e-12
1utj_A	242	Trypsin Specificity As Elucidated By Lie Calculatio		3e-12
1fiz_A	263	Three Dimensional Structure Of Beta-Acrosin From Bo		4e-12
1fiz_A	263	Three Dimensional Structure Of Beta-Acrosin From Bo		1e-05
4dgj_A	235	Structure Of A Human Enteropeptidase Light Chain Va		4e-12
4dgj_A	235	Structure Of A Human Enteropeptidase Light Chain Va		3e-04
1dst_A	228	Mutant Of Factor D With Enhanced Catalytic Activity		7e-12
1fiw_A	290	Three-Dimensional Structure Of Beta-Acrosin From Ra		7e-12
1fiw_A	290	Three-Dimensional Structure Of Beta-Acrosin From Ra		1e-05
2zpr_A	222	Crystal Structure Of Anionic Trypsin Isoform 2 From		9e-12
1sgf_G	237	Crystal Structure Of 7s Ngf: A Complex Of Nerve Gro		9e-12
1sgf_G	237	Crystal Structure Of 7s Ngf: A Complex Of Nerve Gro		9e-04
4an7_A	231	Kunitz Type Trypsin Inhibitor Complex With Porcine		9e-12
2zpq_A	222	Crystal Structure Of Anionic Trypsin Isoform 1 From		1e-11
1bit_A	237	The Crystal Structure Of Anionic Salmon Trypsin In		2e-11
1zzz_A	237	Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes		2e-11
1zzz_A	237	Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes		4e-04
1f0t_A	243	Bovine Trypsin Complexed With Rpr131247 Length = 24		2e-11
1f0t_A	243	Bovine Trypsin Complexed With Rpr131247 Length = 24		3e-04
1hj8_A	222	1.00 Aa Trypsin From Atlantic Salmon Length = 222		2e-11
1oph_B	243	Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh		2e-11
1oph_B	243	Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh		3e-04
2xwa_A	228	Crystal Structure Of Complement Factor D Mutant R20		2e-11
2xw9_A	228	Crystal Structure Of Complement Factor D Mutant S18		2e-11
1dsu_A	228	Human Factor D, Complement Activating Enzyme Length		2e-11
2oq5_A	232	Crystal Structure Of Desc1, A New Member Of The Typ		2e-11
2oq5_A	232	Crystal Structure Of Desc1, A New Member Of The Typ		1e-06
3myw_A	223	The Bowman-Birk Type Inhibitor From Mung Bean In Te		3e-11
1mct_A	223	The Refined 1.6 Angstroms Resolution Crystal Struct		3e-11
1tfx_A	223	Complex Of The Second Kunitz Domain Of Tissue Facto		3e-11
1an1_E	223	Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Len		3e-11
2zps_A	222	Crystal Structure Of Anionic Trypsin Isoform 3 From		3e-11
1bzx_E	222	The Crystal Structure Of Anionic Salmon Trypsin In		3e-11
1trn_A	224	Crystal Structure Of Human Trypsin 1: Unexpected Ph		4e-11
1elv_A	333	Crystal Structure Of The Catalytic Domain Of Human		6e-11
1pyt_C	253	Ternary Complex Of Procarboxypeptidase A, Proprotei		7e-11
1pyt_C	253	Ternary Complex Of Procarboxypeptidase A, Proprotei		3e-07
2a31_A	223	Trypsin In Complex With Borate Length = 223		1e-10
2ra3_A	224	Human Cationic Trypsin Complexed With Bovine Pancre		1e-10
4d9q_A	228	Inhibiting Alternative Pathway Complement Activatio		1e-10
1l2e_A	223	Human Kallikrein 6 (Hk6) Active Form With Benzamidi		1e-10
2olg_A	278	Crystal Structure Of The Serine Protease Domain Of		1e-10
1m9u_A	241	Crystal Structure Of Earthworm Fibrinolytic Enzyme		1e-10
1mbq_A	220	Anionic Trypsin From Pacific Chum Salmon Length = 2		1e-10
2tbs_A	222	Cold-Adaption Of Enzymes: Structural Comparison Bet		1e-10
3s9a_A	234	Russell's Viper Venom Serine Proteinase, Rvv-V (Clo		2e-10
4dg4_A	224	Human Mesotrypsin-S39y Complexed With Bovine Pancre		3e-10
2r9p_A	224	Human Mesotrypsin Complexed With Bovine Pancreatic		3e-10
1h4w_A	224	Structure Of Human Trypsin Iv (Brain Trypsin) Lengt		4e-10
1hyl_A	230	The 1.8 A Structure Of Collagenase From Hypoderma L		4e-10
3plk_A	223	Bovine Trypsin Variant X(Tripleile227) In Complex W		5e-10
1a0j_A	223	Crystal Structure Of A Non-Psychrophilic Trypsin Fr		5e-10
4b1t_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		5e-10
4b2a_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		5e-10
1v2n_T	223	Potent Factor Xa Inhibitor In Complex With Bovine T		6e-10
4b2c_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		6e-10
3pmj_A	223	Bovine Trypsin Variant X(Tripleile227) In Complex W		6e-10
3uns_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		6e-10
3uwi_A	223	Bovine Trypsin Variant X(Tripleglu217phe227) In Com		6e-10
3unq_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		6e-10
1v2k_T	223	Factor Xa Specific Inhibitor In Complex With Bovine		6e-10
4b2b_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		6e-10
3pwb_A	223	Bovine Trypsin Variant X(Tripleglu217ile227) In Com		6e-10
3uqv_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		6e-10
4f4o_C	347	Structure Of The Haptoglobin-Haemoglobin Complex Le		7e-10
1tgs_Z	229	Three-Dimensional Structure Of The Complex Between		7e-10
3v0x_A	223	Bovine Trypsin Variant X(Tripleglu217phe227) In Com		7e-10
1y59_T	223	Dianhydrosugar-Based Benzamidine, Factor Xa Specifi		7e-10
1g3b_A	228	Bovine Beta-Trypsin Bound To Meta-Amidino Schiff Ba		7e-10
1v2u_T	223	Benzamidine In Complex With Bovine Trypsin Varinat		1e-09
1v2o_T	223	Trypsin Inhibitor In Complex With Bovine Trypsin Va		1e-09
1v2s_T	223	Benzamidine In Complex With Bovine Trypsin Variant		1e-09
1v2j_T	223	Benzamidine In Complex With Bovine Trypsin Variant		1e-09
2d8w_A	223	Structure Of Hyper-Vil-Trypsin Length = 223		1e-09
5ptp_A	223	Structure Of Hydrolase (Serine Proteinase) Length =		1e-09
1hj9_A	223	Atomic Resolution Structures Of Trypsin Provide Ins		1e-09
1tab_E	223	Structure Of The Trypsin-Binding Domain Of Bowman-B		1e-09
1v2q_T	223	Trypsin Inhibitor In Complex With Bovine Trypsin Va		1e-09
1taw_A	223	Bovine Trypsin Complexed To Appi Length = 223		1e-09
2tld_E	220	Crystal Structure Of An Engineered Subtilisin Inhib		1e-09
2fi4_E	223	Crystal Structure Of A Bpti Variant (Cys14->ser) In		2e-09
1azz_A	226	Fiddler Crab Collagenase Complexed To Ecotin Length		2e-09
3veq_B	223	A Binary Complex Betwwen Bovine Pancreatic Trypsin		2e-09
1ybw_A	283	Protease Domain Of Hgfa With No Inhibitor Length =		3e-09
4d8n_A	223	Human Kallikrein 6 Inhibitors With A Para-Amidobenz		3e-09
1gvl_A	223	Human Prokallikrein 6 (Hk6) PROZYME PROPROTEASE M P		4e-09
3qk1_A	229	Crystal Structure Of Enterokinase-Like Trypsin Vari		4e-09
1ntp_A	223	Use Of The Neutron Diffraction HD EXCHANGE TECHNIQU		4e-09
3otj_E	223	A Crystal Structure Of Trypsin Complexed With Bpti		4e-09
2vnt_A	276	Urokinase-Type Plasminogen Activator Inhibitor Comp		5e-09
2zgc_A	240	Crystal Structure Of Active Human Granzyme M Length		5e-09
1ao5_A	237	Mouse Glandular Kallikrein-13 (Prorenin Converting		5e-09
1fq3_A	227	Crystal Structure Of Human Granzyme B Length = 227		6e-09
1op8_A	234	Crystal Structure Of Human Granzyme A Length = 234		6e-09
1iau_A	227	Human Granzyme B In Complex With Ac-Iepd-Cho Length		6e-09
1orf_A	234	The Oligomeric Structure Of Human Granzyme A Reveal		6e-09
1gvz_A	237	Prostate Specific Antigen (Psa) From Stallion Semin		1e-08
1spj_A	238	Structure Of Mature Human Tissue Kallikrein (Human		1e-08
2zgj_A	240	Crystal Structure Of D86n-gzmm Complexed With Its O		2e-08
1q3x_A	328	Crystal Structure Of The Catalytic Region Of Human		2e-08
1sgf_A	240	Crystal Structure Of 7s Ngf: A Complex Of Nerve Gro		2e-08
2bdg_A	223	Human Kallikrein 4 Complex With Nickel And P-aminob		2e-08
1fi8_A	228	Rat Granzyme B [n66q] Complexed To Ecotin [81-84 Ie		2e-08
1bda_A	265	Catalytic Domain Of Human Single Chain Tissue Plasm		2e-08
2eek_A	220	Crystal Structure Of Atlantic Cod Trypsin Complexed		2e-08
1fy1_A	225	[r23s,F25e]hbp, A Mutant Of Human Heparin Binding P		3e-08
1fuj_A	221	Pr3 (Myeloblastin) Length = 221		3e-08
1fon_A	240	Crystal Structure Of Bovine Procarboxypeptidase A-S		4e-08
1fon_A	240	Crystal Structure Of Bovine Procarboxypeptidase A-S		4e-04
2ftm_A	224	Crystal Structure Of A Bpti Variant (Cys38->ser) In		4e-08
4gaw_A	226	Crystal Structure Of Active Human Granzyme H Length		6e-08
1sc8_U	262	Urokinase Plasminogen Activator B-Chain-J435 Comple		6e-08
1ton_A	235	Rat Submaxillary Gland Serine Protease, Tonin. Stru		7e-08
1zjk_A	403	Crystal Structure Of The Zymogen Catalytic Region O		8e-08
4fxg_H	242	Complement C4 In Complex With Masp-2 Length = 242		8e-08
3tvj_B	242	Catalytic Fragment Of Masp-2 In Complex With Its Sp		8e-08
1euf_A	227	Bovine Duodenase(New Serine Protease), Crystal Stru		1e-07
1lmw_B	253	Lmw U-Pa Structure Complexed With Egrcmk (Glu-Gly-A		1e-07
1owd_A	245	Substituted 2-naphthamidine Inhibitors Of Urokinase		1e-07
1gj7_B	253	Engineering Inhibitors Highly Selective For The S1		1e-07
3ig6_B	253	Low Molecular Weigth Human Urokinase Type Plasminog		1e-07
1gi8_B	245	A Novel Serine Protease Inhibition Motif Involving		1e-07
1o5a_B	253	Dissecting And Designing Inhibitor Selectivity Dete		1e-07
1owe_A	245	Substituted 2-Naphthamidine Inhibitors Of Urokinase		1e-07
1a7s_A	225	Atomic Resolution Structure Of Hbp Length = 225		2e-07
1h9h_E	231	Complex Of Eeti-Ii With Porcine Trypsin Length = 23		2e-07
1fy3_A	225	[g175q]hbp, A Mutant Of Human Heparin Binding Prote		2e-07
3tju_A	226	Crystal Structure Of Human Granzyme H With An Inhib		2e-07
2zch_P	237	Crystal Structure Of Human Prostate Specific Antige		3e-07
1pjp_A	226	The 2.2 A Crystal Structure Of Human Chymase In Com		3e-07
2qxg_A	224	Crystal Structure Of Human Kallikrein 7 In Complex		3e-07
3bsq_A	227	Crystal Structure Of Human Kallikrein 7 Produced As		3e-07
1klt_A	226	Crystal Structure Of Pmsf-Treated Human Chymase At		3e-07
2wub_A	257	Crystal Structure Of Hgfa In Complex With The Allos		4e-07
2r0l_A	248	Short Form Hgfa With Inhibitory Fab75 Length = 248		4e-07
1nn6_A	228	Human Pro-Chymase Length = 228		5e-07
4afq_A	226	Human Chymase - Fynomer Complex Length = 226		5e-07
3n7o_A	226	X-Ray Structure Of Human Chymase In Complex With Sm		5e-07
1npm_A	225	Neuropsin, A Serine Protease Expressed In The Limbi		6e-07
3h7t_A	235	Crystal Structure Of Scabies Mite Inactivated Prote		7e-07
1rtf_B	252	Complex Of Benzamidine With The Catalytic Domain Of		1e-06
1a5i_A	265	Catalytic Domain Of Vampire Bat (Desmodus Rotundus)		2e-06
1fv9_A	245	Crystal Structure Of Human Microurokinase In Comple		2e-06
3mwi_U	246	The Complex Crystal Structure Of Urokianse And 5-Ni		2e-06
2nwn_A	253	New Pharmacophore For Serine Protease Inhibition Re		2e-06
2o8u_A	253	Crystal Structure And Binding Epitopes Of Urokinase		2e-06
1ejn_A	253	Urokinase Plasminogen Activator B-Chain Inhibitor C		2e-06
4fu7_A	246	Crystal Structure Of The Urokinase Length = 246		2e-06
1w0z_U	247	Urokinase Type Plasminogen Activator Length = 247		2e-06
1au8_A	224	Human Cathepsin G Length = 224		3e-06
1ppz_A	224	Trypsin Complexes At Atomic And Ultra-High Resoluti		3e-06
2psx_A	227	Crystal Structure Of Human Kallikrein 5 In Complex		3e-06
1gdu_A	224	Fusarium Oxysporum Trypsin At Atomic Resolution Len		3e-06
4gso_A	232	Structure Of Jararacussin-I Length = 232		3e-06
2xrc_A	565	Human Complement Factor I Length = 565		4e-06
2xrc_A	565	Human Complement Factor I Length = 565		1e-04
1kyn_B	235	Cathepsin-G Length = 235		4e-06
3fzz_A	227	Structure Of Grc Length = 227		5e-06
3g01_A	227	Structure Of Grc Mutant E192rE193G Length = 227		6e-06
2rdl_A	226	Hamster Chymase 2 Length = 226		6e-06
3h7o_A	228	Crystal Structure Of Scabies Mite Inactivated Prote		7e-06
3h7o_A	228	Crystal Structure Of Scabies Mite Inactivated Prote		5e-04
1ppg_E	218	The Refined 2.3 Angstroms Crystal Structure Of Huma		8e-06
1ppf_E	218	X-Ray Crystal Structure Of The Complex Of Human Leu		8e-06
2rg3_A	218	Covalent Complex Structure Of Elastase Length = 218		8e-06
1hne_E	218	Structure Of Human Neutrophil Elastase In Complex W		1e-05
1xvm_A	224	Trypsin From Fusarium Oxysporum- Room Temperature T		1e-05
2xwb_F	732	Crystal Structure Of Complement C3b In Complex With		1e-05
2ok5_A	752	Human Complement Factor B Length = 752		1e-05
3hrz_D	741	Cobra Venom Factor (Cvf) In Complex With Human Fact		1e-05
1rrk_A	497	Crystal Structure Analysis Of The Bb Segment Of Fac		1e-05
2win_I	507	C3 Convertase (C3bbb) Stabilized By Scin Length = 5		1e-05
1mza_A	240	Crystal Structure Of Human Pro-Granzyme K Length =		1e-05
1dle_A	298	Factor B Serine Protease Domain Length = 298		2e-05
2hnt_C	70	Crystallographic Structure Of Human Gamma-Thrombin		2e-05
1b0f_A	218	Crystal Structure Of Human Neutrophil Elastase With		3e-05
2aip_A	231	Crystal Structure Of Native Protein C Activator Fro		5e-05
1si5_H	240	Protease-Like Domain From 2-Chain Hepatocyte Growth		6e-05
1shy_A	234	The Crystal Structure Of Hgf Beta-Chain In Complex		6e-05
3beu_A	224	Na+-Dependent Allostery Mediates Coagulation Factor		6e-05
3i78_A	229	3599170186220-Loops Of Fxa In Sgt Length = 229		9e-05
3i77_A	230	3599170-Loops Of Fxa In Sgt Length = 230		1e-04
3rp2_A	224	The Structure Of Rat Mast Cell Protease Ii At 1.9-A		2e-04
2hnt_E	81	Crystallographic Structure Of Human Gamma-Thrombin		2e-04
4e7n_A	238	Crystal Structure Of Ahv_tl-I, A Glycosylated Snake		2e-04
3h5c_B	317	X-Ray Structure Of Protein Z-Protein Z Inhibitor Co		8e-04
3f1s_B	283	Crystal Structure Of Protein Z Complexed With Prote		9e-04

>pdb|3P8G|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Benzamidine Length = 241

Iteration: 1
 Score =  105 bits (263), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED------VPPSD 444
           +VGG  A  G+WPWQ+SL    +    H CGA+L + NW V+AAHC  D        P+ 
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQG---HICGASLISPNWLVSAAHCYIDDRGFRYSDPTQ 57
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
               LG HD S    P G QERR++ + SHP F+  TF+YD+ALL   +P ++   + PI
Sbjct: 58  WTAFLGLHDQSQRSAP-GVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPI 116
Query: 505 CVPEDDTNF-VGTSAHVTGWGRLYEG 529
           C+P+    F  G +  VTGWG    G
Sbjct: 117 CLPDASHVFPAGKAIWVTGWGHTQYG 142

>pdb|3P8G|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Benzamidine Length = 241

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG  A  G+WPWQ+SL    +    H CGA+L + NW V+AAHC  D
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQG---HICGASLISPNWLVSAAHCYID 46

>pdb|1EAW|A Chain A, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (Aprotinin) Complex Length = 241

Iteration: 1
 Score =  105 bits (263), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED------VPPSD 444
           +VGG  A  G+WPWQ+SL    +    H CGA+L + NW V+AAHC  D        P+ 
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQG---HICGASLISPNWLVSAAHCYIDDRGFRYSDPTQ 57
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
               LG HD S    P G QERR++ + SHP F+  TF+YD+ALL   +P ++   + PI
Sbjct: 58  WTAFLGLHDQSQRSAP-GVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPI 116
Query: 505 CVPEDDTNF-VGTSAHVTGWGRLYEG 529
           C+P+    F  G +  VTGWG    G
Sbjct: 117 CLPDASHVFPAGKAIWVTGWGHTQYG 142

>pdb|1EAW|A Chain A, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (Aprotinin) Complex Length = 241

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG  A  G+WPWQ+SL    +    H CGA+L + NW V+AAHC  D
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQG---HICGASLISPNWLVSAAHCYID 46

>pdb|3BN9|B Chain B, Crystal Structure Of Mt-Sp1 In Complex With Fab Inhibitor E2 Length = 241

Iteration: 1
 Score =  102 bits (254), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED------VPPSD 444
           +VGG  A  G+WPWQ+SL    +    H CGA+L + NW V+AAHC  D        P+ 
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQG---HICGASLISPNWLVSAAHCYIDDRGFRYSDPTQ 57
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
               LG HD S    P G QERR++ + SHP F+  TF+YD+ALL   +P ++   + PI
Sbjct: 58  WTAFLGLHDQSQRSAP-GVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPI 116
Query: 505 CVPEDDTNF-VGTSAHVTGWGRLYEG 529
            +P+    F  G +  VTGWG    G
Sbjct: 117 SLPDASHVFPAGKAIWVTGWGHTQYG 142

>pdb|3BN9|B Chain B, Crystal Structure Of Mt-Sp1 In Complex With Fab Inhibitor E2 Length = 241

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG  A  G+WPWQ+SL    +    H CGA+L + NW V+AAHC  D
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQG---HICGASLISPNWLVSAAHCYID 46

>pdb|2CGA|A Chain A, Bovine Chymotrypsinogen A. X-Ray Crystal Structure Analysis And Refinement Of A New Crystal Form At 1.8 Angstroms Resolution Length = 245

Iteration: 1
 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR 448
           SRIV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAHC   V  SD+++ 
Sbjct: 14  SRIVNGEEAVPGSWPWQVSLQD---KTGFHFCGGSLINENWVVTAAHC--GVTTSDVVVA 68
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            GE D  +  E    Q+ ++  V  + +++  T   D+ LL+      F   +  +C+P 
Sbjct: 69  -GEFDQGSSSEK--IQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPS 125
Query: 509 DDTNF-VGTSAHVTGWG 524
              +F  GT+   TGWG
Sbjct: 126 ASDDFAAGTTCVTTGWG 142

>pdb|2CGA|A Chain A, Bovine Chymotrypsinogen A. X-Ray Crystal Structure Analysis And Refinement Of A New Crystal Form At 1.8 Angstroms Resolution Length = 245

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 556 ILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           +L   SRIV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAHC
Sbjct: 9   VLSGLSRIVNGEEAVPGSWPWQVSLQD---KTGFHFCGGSLINENWVVTAAHC 58

>pdb|2F91|A Chain A, 1.2a Resolution Structure Of A Crayfish Trypsin Complexed With A Peptide Inhibitor, Sgti Length = 237

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV--EDVP-PSDLLL 447
           IVGG  AT G++P+Q+S ++       H CGA+++NEN+A+TA HCV  +D   PS L +
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQI 60
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
             GE D+S  E     Q   V  +  H  FD    + D++LL+    + F  N+ PI +P
Sbjct: 61  VAGELDMSVNEGS--EQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALP 118
Query: 508 EDDTNFVGTSAHVTGWGRLYEG 529
           E      G    VTGWG   EG
Sbjct: 119 EQGHTATG-DVIVTGWGTTSEG 139

>pdb|2F91|A Chain A, 1.2a Resolution Structure Of A Crayfish Trypsin Complexed With A Peptide Inhibitor, Sgti Length = 237

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           IVGG  AT G++P+Q+S ++       H CGA+++NEN+A+TA HCV
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCV 47

>pdb|1YM0|A Chain A, Crystal Structure Of Earthworm Fibrinolytic Enzyme Component B: A Novel, Glycosylated Two-chained Trypsin Length = 238

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A   ++PWQ+S+R+  +S+  H CG ++ N+ W V AAHC++   P+ + L +G
Sbjct: 1   IVGGIEARPYEFPWQVSVRR--KSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EHD S        Q   V  +  +  +DP T E D+++++    + F  N+ PIC P+  
Sbjct: 59  EHDSSAASTV--RQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPA 116
Query: 511 TNFVGTSAHVTGWGRLYEG 529
            ++V   +  +GWG +  G
Sbjct: 117 NDYVYRKSQCSGWGTINSG 135

>pdb|1YM0|A Chain A, Crystal Structure Of Earthworm Fibrinolytic Enzyme Component B: A Novel, Glycosylated Two-chained Trypsin Length = 238

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPII 620
           IVGG +A   ++PWQ+S+R+  +S+  H CG ++ N+ W V AAHC++     ++ ++
Sbjct: 1   IVGGIEARPYEFPWQVSVRR--KSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLV 56

>pdb|2JET|B Chain B, Crystal Structure Of A Trypsin-Like Mutant (S189d, A226g) Chymotrypsin Length = 128

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 9/133 (6%)
Query: 394 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHD 453
           GE A  G WPWQ+SL+     T  H CG +L +E+W VTAAHC   V  SD+++  GE D
Sbjct: 1   GEDAIPGSWPWQVSLQD---KTGFHFCGGSLISEDWVVTAAHC--GVKTSDVVVA-GEFD 54
Query: 454 LSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF 513
             ++EE    Q  ++  V  +P+F+  T   D+ LL+   P +F   +  +C+P  D +F
Sbjct: 55  QGSDEE--NIQVLKIAQVFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVCLPNVDDDF 112
Query: 514 -VGTSAHVTGWGR 525
             GT    TGWG+
Sbjct: 113 PPGTVCATTGWGK 125

>pdb|2JET|B Chain B, Crystal Structure Of A Trypsin-Like Mutant (S189d, A226g) Chymotrypsin Length = 128

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 566 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           GE A  G WPWQ+SL+     T  H CG +L +E+W VTAAHC
Sbjct: 1   GEDAIPGSWPWQVSLQD---KTGFHFCGGSLISEDWVVTAAHC 40

>pdb|1KDQ|A Chain A, Crystal Structure Analysis Of The Mutant S189d Rat Chymotrypsin Length = 131

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 9/136 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IV GE A  G WPWQ+SL+     T  H CG +L +E+W VTAAHC   V  SD+++  G
Sbjct: 1   IVNGEDAIPGSWPWQVSLQD---KTGFHFCGGSLISEDWVVTAAHC--GVKTSDVVVA-G 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E D  ++EE    Q  ++  V  +P+F+  T   D+ LL+   P +F   +  + +P  D
Sbjct: 55  EFDQGSDEE--NIQVLKIAQVFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVSLPNVD 112
Query: 511 TNF-VGTSAHVTGWGR 525
            +F  GT    TGWG+
Sbjct: 113 DDFPPGTVCATTGWGK 128

>pdb|1KDQ|A Chain A, Crystal Structure Analysis Of The Mutant S189d Rat Chymotrypsin Length = 131

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IV GE A  G WPWQ+SL+     T  H CG +L +E+W VTAAHC
Sbjct: 1   IVNGEDAIPGSWPWQVSLQD---KTGFHFCGGSLISEDWVVTAAHC 43

>pdb|1MTN|B Chain B, Bovine Alpha-Chymotrypsin:bpti Crystallization Length = 131

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAHC   V  SD+++  G
Sbjct: 1   IVNGEEAVPGSWPWQVSLQD---KTGFHFCGGSLINENWVVTAAHC--GVTTSDVVVA-G 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E D  +  E    Q+ ++  V  + +++  T   D+ LL+      F   +  +C+P   
Sbjct: 55  EFDQGSSSEK--IQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSAS 112
Query: 511 TNF-VGTSAHVTGWG 524
            +F  GT+   TGWG
Sbjct: 113 DDFAAGTTCVTTGWG 127

>pdb|1MTN|B Chain B, Bovine Alpha-Chymotrypsin:bpti Crystallization Length = 131

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAHC
Sbjct: 1   IVNGEEAVPGSWPWQVSLQD---KTGFHFCGGSLINENWVVTAAHC 43

>pdb|1DLK|B Chain B, Crystal Structure Analysis Of Delta-Chymotrypsin Bound To A Peptidyl Chloromethyl Ketone Inhibitor Length = 230

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAHC   V  SD+++  G
Sbjct: 1   IVNGEEAVPGSWPWQVSLQD---KTGFHFCGGSLINENWVVTAAHC--GVTTSDVVVA-G 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E D  +  E    Q+ ++  V  + +++  T   D+ LL+      F   +  +C+P   
Sbjct: 55  EFDQGSSSEK--IQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSAS 112
Query: 511 TNF-VGTSAHVTGWG 524
            +F  GT+   TGWG
Sbjct: 113 DDFAAGTTCVTTGWG 127

>pdb|1DLK|B Chain B, Crystal Structure Analysis Of Delta-Chymotrypsin Bound To A Peptidyl Chloromethyl Ketone Inhibitor Length = 230

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAHC
Sbjct: 1   IVNGEEAVPGSWPWQVSLQD---KTGFHFCGGSLINENWVVTAAHC 43

>pdb|2WPH|S Chain S, Factor Ixa Superactive Triple Mutant Length = 235

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 14/146 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE      + +  G
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE--TGVKITVVAG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP--RTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++  EE  +  Q+R V  +  H  F+    T+ +D+ALL   EP+     + PIC+ +
Sbjct: 55  EHNI--EETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIAD 112
Query: 509 DD-TNFVGT--SAHVTGWGRLY-EGR 530
            + TN      S +V+GWGR++ +GR
Sbjct: 113 KEYTNIFLKFGSGYVSGWGRVFHKGR 138

>pdb|2WPH|S Chain S, Factor Ixa Superactive Triple Mutant Length = 235

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE 44

>pdb|2WPM|S Chain S, Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Length = 235

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 14/146 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE      + +  G
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE--TGVKITVVAG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP--RTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++  EE  +  Q+R V  +  H  F+    T+ +D+ALL   EP+     + PIC+ +
Sbjct: 55  EHNI--EETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIAD 112
Query: 509 DD-TNFVGT--SAHVTGWGRLY-EGR 530
            + TN      S +V+GWGR++ +GR
Sbjct: 113 KEYTNIFLKFGSGYVSGWGRVFHKGR 138

>pdb|2WPM|S Chain S, Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Length = 235

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE 44

>pdb|2BQ6|B Chain B, Crystal Structure Of Factor Xa In Complex With 21 Length = 249

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 17/160 (10%)
Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR 448
           +RIVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R
Sbjct: 14  TRIVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVR 68
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           +G  D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE
Sbjct: 69  VG--DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPE 126
Query: 509 DD----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
            D    T     +  V+G+GR +E       G  +TR +M
Sbjct: 127 RDWAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 160

>pdb|2WPI|S Chain S, Factor Ixa Superactive Double Mutant Length = 235

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 14/146 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE      + +  G
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE--TGVKITVVAG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP--RTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++  EE  +  Q+R V  +  H  ++    T+ +D+ALL   EP+     + PIC+ +
Sbjct: 55  EHNI--EETEHTEQKRNVIRIIPHHNYNAAINTYNHDIALLELDEPLVLNSYVTPICIAD 112
Query: 509 DD-TNFVGT--SAHVTGWGRLY-EGR 530
            + TN      S +V+GWGR++ +GR
Sbjct: 113 KEYTNIFLKFGSGYVSGWGRVFHKGR 138

>pdb|2WPI|S Chain S, Factor Ixa Superactive Double Mutant Length = 235

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE 44

>pdb|1Z8G|A Chain A, Crystal Structure Of The Extracellular Region Of The Transmembrane Serine Protease Hepsin With Covalently Bound Preferred Substrate Length = 372

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 381 CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV 440
           CGRR  P  RIVGG   + G+WPWQ+SLR        H CG +L + +W +TAAHC    
Sbjct: 108 CGRRKLPVDRIVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHC---F 160
Query: 441 PPSDLLL---RLGEHDLSTEEEPYGYQERRVQIVASH----PQFDPRTFE--YDLALLRF 491
           P  + +L   R+    ++ +  P+G Q   VQ V  H    P  DP + E   D+AL+  
Sbjct: 161 PERNRVLSRWRVFAGAVA-QASPHGLQ-LGVQAVVYHGGYLPFRDPNSEENSNDIALVHL 218
Query: 492 YEPVKFQPNIIPICVPEDDTNFV-GTSAHVTGWG 524
             P+     I P+C+P      V G    VTGWG
Sbjct: 219 SSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWG 252

>pdb|1Z8G|A Chain A, Crystal Structure Of The Extracellular Region Of The Transmembrane Serine Protease Hepsin With Covalently Bound Preferred Substrate Length = 372

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 554 NRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
            R   P  RIVGG   + G+WPWQ+SLR        H CG +L + +W +TAAHC
Sbjct: 109 GRRKLPVDRIVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHC 159

>pdb|3T2N|A Chain A, Human Hepsin Protease In Complex With The Fab Fragment Of An Inhibitory Antibody Length = 372

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 381 CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV 440
           CGRR  P  RIVGG   + G+WPWQ+SLR        H CG +L + +W +TAAHC    
Sbjct: 108 CGRRKLPVDRIVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHC---F 160
Query: 441 PPSDLLL---RLGEHDLSTEEEPYGYQERRVQIVASH----PQFDPRTFE--YDLALLRF 491
           P  + +L   R+    ++ +  P+G Q   VQ V  H    P  DP + E   D+AL+  
Sbjct: 161 PERNRVLSRWRVFAGAVA-QASPHGLQ-LGVQAVVYHGGYLPFRDPNSEENSNDIALVHL 218
Query: 492 YEPVKFQPNIIPICVPEDDTNFV-GTSAHVTGWG 524
             P+     I P+C+P      V G    VTGWG
Sbjct: 219 SSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWG 252

>pdb|3T2N|A Chain A, Human Hepsin Protease In Complex With The Fab Fragment Of An Inhibitory Antibody Length = 372

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 554 NRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
            R   P  RIVGG   + G+WPWQ+SLR        H CG +L + +W +TAAHC
Sbjct: 109 GRRKLPVDRIVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHC 159

>pdb|3ELA|H Chain H, Crystal Structure Of Active Site Inhibited Coagulation Factor Viia Mutant In Complex With Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP-SDLLLRL 449
           IVGG+    G+ PWQ+ L   +    L  CG  L N  W V+AAHC + +    +L+  L
Sbjct: 1   IVGGKDCPKGECPWQVLL--LVNGAQL--CGGTLINTIWVVSAAHCFDKIKNWRNLIAVL 56
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GEHDLS  E     Q RRV  V     + P T  +D+ALLR ++PV    +++P+C+PE 
Sbjct: 57  GEHDLS--EHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPER 114
Query: 510 DTN-----FVGTSAHVTGWGRLYE 528
             +     FV  S  V+GWG+L +
Sbjct: 115 TFSERTLAFVRFSL-VSGWGQLLD 137

>pdb|1DAN|H Chain H, Complex Of Active Site Inhibited Human Blood Coagulation Factor Viia With Human Recombinant Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 13/144 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP-SDLLLRL 449
           IVGG+    G+ PWQ+ L   +    L  CG  L N  W V+AAHC + +    +L+  L
Sbjct: 1   IVGGKVCPKGECPWQVLLL--VNGAQL--CGGTLINTIWVVSAAHCFDKIKNWRNLIAVL 56
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GEHDLS  E     Q RRV  V     + P T  +D+ALLR ++PV    +++P+C+PE 
Sbjct: 57  GEHDLS--EHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPER 114
Query: 510 DTN-----FVGTSAHVTGWGRLYE 528
             +     FV  S  V+GWG+L +
Sbjct: 115 TFSERTLAFVRFSL-VSGWGQLLD 137

>pdb|1PYT|D Chain D, Ternary Complex Of Procarboxypeptidase A, Proproteinase E, And Chymotrypsinogen C Length = 251

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 381 CGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 437
           CG  +F    S+R+VGGE A    WPWQISL+    +T+ H CG  L   N  +TAAHC+
Sbjct: 1   CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60
Query: 438 EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF 497
            +       + LG+++L  E+E  G     V  +  H +++      D+AL++  E V+ 
Sbjct: 61  SNT--LTYRVALGKNNLEVEDEA-GSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVEL 117
Query: 498 QPNIIPICVPEDDTNF-VGTSAHVTGWGRLY 527
              I   C+P + +         VTGWGRLY
Sbjct: 118 GDTIQVACLPSEGSLLPQDYPCFVTGWGRLY 148

>pdb|1PYT|D Chain D, Ternary Complex Of Procarboxypeptidase A, Proproteinase E, And Chymotrypsinogen C Length = 251

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI 619
           S+R+VGGE A    WPWQISL+    +T+ H CG  L   N  +TAAHC+ +  +  + +
Sbjct: 11  SARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNTLTYRVAL 70
Query: 620 IQN 622
            +N
Sbjct: 71  GKN 73

>pdb|1RFN|A Chain A, Human Coagulation Factor Ixa In Complex With P-Amino Benzamidine Length = 235

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 14/146 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE      + +  G
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE--TGVKITVVAG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP--RTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++  EE  +  Q+R V  +  H  ++     + +D+ALL   EP+     + PIC+ +
Sbjct: 55  EHNI--EETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIAD 112
Query: 509 DD-TNFVGT--SAHVTGWGRLY-EGR 530
            + TN      S +V+GWGR++ +GR
Sbjct: 113 KEYTNIFLKFGSGYVSGWGRVFHKGR 138

>pdb|1RFN|A Chain A, Human Coagulation Factor Ixa In Complex With P-Amino Benzamidine Length = 235

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE 44

>pdb|1MQ5|A Chain A, Crystal Structure Of 3-chloro-n-[4-chloro-2-[[(4-chlorophenyl) Amino]carbonyl]phenyl]-4-[(4-methyl-1- piperazinyl)methyl]-2- Thiophenecarboxamide Complexed With Human Factor Xa Length = 233

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 145

>pdb|1XKA|C Chain C, Factor Xa Complexed With A Synthetic Inhibitor Fx-2212a,(2s)-(3'- Amidino-3-Biphenylyl)-5-(4-Pyridylamino)pentanoic Acid Length = 235

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 145

>pdb|1FJS|A Chain A, Crystal Structure Of The Inhibitor Zk-807834 (Ci-1031) Complexed With Factor Xa Length = 234

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 145

>pdb|2Y5F|A Chain A, Factor Xa - Cation Inhibitor Complex Length = 234

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGEQSTRLKM 145

>pdb|3KCG|H Chain H, Crystal Structure Of The Antithrombin-Factor Ixa- Pentasaccharide Complex Length = 235

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 14/146 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE      + +  G
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE--TGVKITVVAG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP--RTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++  EE  +  Q+R V  +  H  ++     + +D+ALL   EP+     + PIC+ +
Sbjct: 55  EHNI--EETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIAD 112
Query: 509 DD-TNFVGT--SAHVTGWGRLY-EGR 530
            + TN      S +V+GWGR++ +GR
Sbjct: 113 KEYTNIFLKFGSGYVSGWGRVFHKGR 138

>pdb|3KCG|H Chain H, Crystal Structure Of The Antithrombin-Factor Ixa- Pentasaccharide Complex Length = 235

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           +VGGE A  G++PWQ+ L   + +     CG ++ NE W VTAAHCVE
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAF----CGGSIVNEKWIVTAAHCVE 44

>pdb|1HCG|A Chain A, Structure Of Human Des(1-45) Factor Xa At 2.2 Angstroms Resolution Length = 241

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 145

>pdb|2BOK|A Chain A, Factor Xa- Cation Length = 241

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGEQSTRLKM 145

>pdb|2GD4|H Chain H, Crystal Structure Of The Antithrombin-S195a Factor Xa-Pentasaccharide Complex Length = 241

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 145

>pdb|3ENS|B Chain B, Crystal Structure Of Human Fxa In Complex With Methyl (2z)-3-[(3- Chloro-1h-indol-7-yl)amino]-2-cyano-3-{[(3s)-2-oxo-1-(2- oxo-2- Pyrrolidin-1-ylethyl)azepan-3-yl]amino}acrylate Length = 238

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 145

>pdb|1PFX|C Chain C, Porcine Factor Ixa Length = 235

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 13/142 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGGE A  G++PWQ+ L   I +     CG ++ NE W VTAAHC+E  P   + +  G
Sbjct: 1   IVGGENAKPGQFPWQVLLNGKIDAF----CGGSIINEKWVVTAAHCIE--PGVKITVVAG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALLRFYEPVKFQPNIIPICVPE 508
           E++  TEE     Q R V     H  ++    +Y  D+ALL   EP+     + PIC+ +
Sbjct: 55  EYN--TEETEPTEQRRNVIRAIPHHSYNATVNKYSHDIALLELDEPLTLNSYVTPICIAD 112
Query: 509 DD-TNFVGT--SAHVTGWGRLY 527
            + TN      S +V+GWGR++
Sbjct: 113 KEYTNIFLKFGSGYVSGWGRVF 134

>pdb|1PFX|C Chain C, Porcine Factor Ixa Length = 235

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           IVGGE A  G++PWQ+ L   I +     CG ++ NE W VTAAHC+E
Sbjct: 1   IVGGENAKPGQFPWQVLLNGKIDAF----CGGSIINEKWVVTAAHCIE 44

>pdb|1EZQ|A Chain A, Crystal Structure Of Human Coagulation Factor Xa Complexed With Rpr128515 Length = 254

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 145

>pdb|1C5M|D Chain D, Structural Basis For Selectivity Of A Small Molecule, S1- Binding, Sub-Micromolar Inhibitor Of Urokinase Type Plasminogen Activator Length = 255

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCLYQA--KRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 145

>pdb|1KIG|H Chain H, Bovine Factor Xa Length = 241

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG     G+ PWQ  L       +   CG  + NE + +TAAHC+         +R+G
Sbjct: 1   IVGGRDCAEGECPWQALLVNEENEGF---CGGTILNEFYVLTAAHCLHQA--KRFTVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E        V++   H +F   T+++D+A+LR   P++F+ N+ P C+PE D
Sbjct: 56  --DRNTEQEEGNEMAHEVEMTVKHSRFVKETYDFDIAVLRLKTPIRFRRNVAPACLPEKD 113
Query: 511 ----TNFVGTSAHVTGWGRLYE-GRF 531
               T     +  V+G+GR +E GR 
Sbjct: 114 WAEATLMTQKTGIVSGFGRTHEKGRL 139

>pdb|1MD8|A Chain A, Monomeric Structure Of The Active Catalytic Domain Of Complement Protease C1r Length = 329

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 17/171 (9%)
Query: 368 ESQGINMSNYKEVCGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLH-KCGAA 423
           E +G  +     VCG+ + P     RI+GG+KA  G +PWQ+        T +H + G A
Sbjct: 64  EQKGEKIPRCLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVF-------TNIHGRGGGA 116
Query: 424 LFNENWAVTAAHCV-----EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD 478
           L  + W +TAAH +     E    + L + LG  ++    +   +  RRV +   + Q +
Sbjct: 117 LLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDE 176
Query: 479 PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYE 528
              FE D+ALL     V   PN++PIC+P++DT + +G   +V+G+G + E
Sbjct: 177 SYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE 227

>pdb|4H4F|A Chain A, Crystal Structure Of Human Chymotrypsin C (ctrc) Bound To Inhibitor Eglin C From Hirudo Medicinalis Length = 249

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A    WPWQISL+     T+ H CG  L   N+ +TAAHC+ +       + +G
Sbjct: 1   VVGGEDARPHSWPWQISLQYLKNDTWRHTCGGTLIASNFVLTAAHCISNT--RTYRVAVG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           +++L  E+E  G     V  +  H +++      D+AL++  E V+    I   C+PE D
Sbjct: 59  KNNLEVEDEE-GSLFVGVDTIHVHKRWNALLLRNDIALIKLAEHVELSDTIQVACLPEKD 117
Query: 511 TNF-VGTSAHVTGWGRLY 527
           +        +VTGWGRL+
Sbjct: 118 SLLPKDYPCYVTGWGRLW 135

>pdb|4H4F|A Chain A, Crystal Structure Of Human Chymotrypsin C (ctrc) Bound To Inhibitor Eglin C From Hirudo Medicinalis Length = 249

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           +VGGE A    WPWQISL+     T+ H CG  L   N+ +TAAHC+ +  +  + + +N
Sbjct: 1   VVGGEDARPHSWPWQISLQYLKNDTWRHTCGGTLIASNFVLTAAHCISNTRTYRVAVGKN 60

>pdb|1MH0|A Chain A, Crystal Structure Of The Anticoagulant Slow Form Of Thrombin Length = 287

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 26  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 83
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 84  FTENDLLVRIGKHS-RTRYEANIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 142
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 143 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 176

>pdb|1MH0|A Chain A, Crystal Structure Of The Anticoagulant Slow Form Of Thrombin Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 26  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 75

>pdb|1MD7|A Chain A, Monomeric Structure Of The Zymogen Of Complement Protease C1r Length = 328

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 17/171 (9%)
Query: 368 ESQGINMSNYKEVCGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLH-KCGAA 423
           E +G  +     VCG+ + P     RI+GG+KA  G +PWQ+        T +H + G A
Sbjct: 64  EQKGEKIPRCLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVF-------TNIHGRGGGA 116
Query: 424 LFNENWAVTAAHCV-----EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD 478
           L  + W +TAAH +     E    + L + LG  ++    +   +  RRV +   + Q +
Sbjct: 117 LLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDE 176
Query: 479 PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYE 528
              FE D+ALL     V   PN++PIC+P++DT + +G   +V+G+G + E
Sbjct: 177 SYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE 227

>pdb|1BRU|P Chain P, Structure Of Porcine Pancreatic Elastase Complexed With The Elastase Inhibitor Gr143783 Length = 241

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A    WPWQ+SL+      + H CG  L +++W +TAAHC+       ++  LG
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSRTYRVV--LG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFE--YDLALLRFYEPVKFQPNIIPICVPE 508
            H LST E   G    +V  +  H  ++        D+ALL+   PV     I   C+P 
Sbjct: 59  RHSLSTNEP--GSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPA 116
Query: 509 DDT----NFVGTSAHVTGWGRL 526
             T    N+V    +VTGWGRL
Sbjct: 117 AGTILPNNYV---CYVTGWGRL 135

>pdb|1BRU|P Chain P, Structure Of Porcine Pancreatic Elastase Complexed With The Elastase Inhibitor Gr143783 Length = 241

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           +VGGE A    WPWQ+SL+      + H CG  L +++W +TAAHC+ 
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS 48

>pdb|1D6W|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electrophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 287

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 26  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 83
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 84  FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 142
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 143 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 176

>pdb|1D6W|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electrophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 26  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 75

>pdb|1EOJ|A Chain A, Design Of P1' And P3' Residues Of Trivalent Thrombin Inhibitors And Their Crystal Structures Length = 289

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 28  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 85
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 86  FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 144
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 145 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 178

>pdb|1EOJ|A Chain A, Design Of P1' And P3' Residues Of Trivalent Thrombin Inhibitors And Their Crystal Structures Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 28  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 77

>pdb|1NM6|A Chain A, Thrombin In Complex With Selective Macrocyclic Inhibitor At 1.8a Length = 287

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 25  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 82
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 83  FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 141
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 142 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 175

>pdb|1NM6|A Chain A, Thrombin In Complex With Selective Macrocyclic Inhibitor At 1.8a Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 25  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 74

>pdb|1D9I|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 288

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 26  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 83
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 84  FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 142
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 143 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 176

>pdb|1D9I|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 288

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 26  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 75

>pdb|2BDY|A Chain A, Thrombin In Complex With Inhibitor Length = 289

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 26  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 83
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 84  FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 142
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 143 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 176

>pdb|2BDY|A Chain A, Thrombin In Complex With Inhibitor Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 26  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 75

>pdb|1NU9|A Chain A, Staphylocoagulase-prethrombin-2 Complex Length = 291

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 28  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 85
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 86  FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 144
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 145 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 178

>pdb|1NU9|A Chain A, Staphylocoagulase-prethrombin-2 Complex Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 28  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 77

>pdb|1HAG|E Chain E, The Isomorphous Structures Of Prethrombin2, Hirugen-And Ppack- Thrombin: Changes Accompanying Activation And Exosite Binding To Thrombin Length = 295

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 32  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 89
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 90  FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 148
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 149 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 182

>pdb|1HAG|E Chain E, The Isomorphous Structures Of Prethrombin2, Hirugen-And Ppack- Thrombin: Changes Accompanying Activation And Exosite Binding To Thrombin Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 32  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 81

>pdb|3SQE|E Chain E, Crystal Structure Of Prethrombin-2 Mutant S195a In The Alternative Form Length = 290

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 27  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 84
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 85  FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 143
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 144 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 177

>pdb|3SQE|E Chain E, Crystal Structure Of Prethrombin-2 Mutant S195a In The Alternative Form Length = 290

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 27  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 76

>pdb|1AUT|C Chain C, Human Activated Protein C Length = 250

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 16/154 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++ G+    G  PWQ+ L   + S     CGA L + +W +TAAHC+++     LL+RLG
Sbjct: 1   LIDGKMTRRGDSPWQVVL---LDSKKKLACGAVLIHPSWVLTAAHCMDE--SKKLLVRLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP--- 507
           E+DL   E+     +  ++ V  HP +   T + D+ALL   +P      I+PIC+P   
Sbjct: 56  EYDLRRWEK--WELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSG 113
Query: 508 --EDDTNFVGTSAHVTGWG----RLYEGRFRRSY 535
             E + N  G    VTGWG    R  E +  R++
Sbjct: 114 LAERELNQAGQETLVTGWGYHSSREKEAKRNRTF 147

>pdb|3F6U|H Chain H, Crystal Structure Of Human Activated Protein C (Apc) Complexed With Ppack Length = 240

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 16/154 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++ G+    G  PWQ+ L   + S     CGA L + +W +TAAHC+++     LL+RLG
Sbjct: 1   LIDGKMTRRGDSPWQVVL---LDSKKKLACGAVLIHPSWVLTAAHCMDE--SKKLLVRLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP--- 507
           E+DL   E+     +  ++ V  HP +   T + D+ALL   +P      I+PIC+P   
Sbjct: 56  EYDLRRWEK--WELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSG 113
Query: 508 --EDDTNFVGTSAHVTGWG----RLYEGRFRRSY 535
             E + N  G    VTGWG    R  E +  R++
Sbjct: 114 LAERELNQAGQETLVTGWGYHSSREKEAKRNRTF 147

>pdb|3K65|B Chain B, Crystal Structure Of Prethombin-2FRAGMENT-2 Complex Length = 308

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 45  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 102
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 103 FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 161
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 162 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 195

>pdb|3K65|B Chain B, Crystal Structure Of Prethombin-2FRAGMENT-2 Complex Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 45  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 94

>pdb|1JWT|A Chain A, Crystal Structure Of Thrombin In Complex With A Novel Bicyclic Lactam Inhibitor Length = 305

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 32  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 89
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 90  FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 148
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 149 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 182

>pdb|1JWT|A Chain A, Crystal Structure Of Thrombin In Complex With A Novel Bicyclic Lactam Inhibitor Length = 305

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 32  YIDGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 81

>pdb|1H8I|H Chain H, X-Ray Crystal Structure Of Human Alpha-Thrombin With A Tripeptide Phosphonate Inhibitor Length = 253

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYEGRFRRSYGHPATRQ 542
           +C+P+ +T       G    VTGWG L E     ++G P+  Q
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE-----TWGQPSVLQ 155

>pdb|1DM4|B Chain B, Ser195ala Mutant Of Human Thrombin Complexed With Fibrinopeptide A (7- 16) Length = 260

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 14/150 (9%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPS 443
           RIV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +
Sbjct: 1   RIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEN 58
Query: 444 DLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNII 502
           DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I 
Sbjct: 59  DLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIH 117
Query: 503 PICVPEDDTNF----VGTSAHVTGWGRLYE 528
           P+C+P+ +T       G    VTGWG L E
Sbjct: 118 PVCLPDRETAASLLQAGYKGRVTGWGNLKE 147

>pdb|3NXP|A Chain A, Crystal Structure Of Human Prethrombin-1 Length = 424

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------ED 439
           +   RIV G  A  G  PWQ+ L  + +S     CGA+L ++ W +TAAHC+      ++
Sbjct: 161 YIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKN 218
Query: 440 VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQ 498
              +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F 
Sbjct: 219 FTENDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFS 277
Query: 499 PNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
             I P+C+P+ +T       G    VTGWG L E
Sbjct: 278 DYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 311

>pdb|3NXP|A Chain A, Crystal Structure Of Human Prethrombin-1 Length = 424

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G  A  G  PWQ+ L  + +S     CGA+L ++ W +TAAHC+
Sbjct: 161 YIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLTAAHCL 210

>pdb|2F83|A Chain A, Crystal Structure At 2.9 Angstroms Resolution Of Human Plasma Coagulation Factor Xi Zymogen Length = 625

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 367 IESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFN 426
           I    + +      C  ++ P  RIVGG  +  G+WPWQ++L      T  H CG ++  
Sbjct: 366 ISGYTLRLCKMDNECTTKIKP--RIVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIG 422
Query: 427 ENWAVTAAHCVEDVPPSDLLLR----LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTF 482
             W +TAAHC   V    +L      L + ++  +   +G QE     +  H Q+     
Sbjct: 423 NQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQE-----IIIHDQYKMAES 477
Query: 483 EYDLALLRFYEPVKFQPNIIPICVP-EDDTNFVGTSAHVTGWG 524
            YD+ALL+    V +  +  PIC+P + D N + T   VTGWG
Sbjct: 478 GYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWG 520

>pdb|2F83|A Chain A, Crystal Structure At 2.9 Angstroms Resolution Of Human Plasma Coagulation Factor Xi Zymogen Length = 625

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           RIVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 387 RIVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 432

>pdb|1FAX|A Chain A, Coagulation Factor Xa Inhibitor Complex Length = 254

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALL---INEENEGFCGGTILSEFYILTAAHCLYQA--KRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           + + + EE      E  V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  DRNTAAEEGGEAVHE--VEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
               T     +  V+G+GR +E       G  +TR +M
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHE------KGRQSTRLKM 145

>pdb|1GPZ|A Chain A, The Crystal Structure Of The Zymogen Catalytic Domain Of Complement Protease C1r Length = 399

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 17/171 (9%)
Query: 368 ESQGINMSNYKEVCGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLH-KCGAA 423
           E +G  +     VCG+ + P     +I+GG+KA  G +PWQ+        T +H + G A
Sbjct: 132 EQKGEKIPRCLPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVF-------TNIHGRGGGA 184
Query: 424 LFNENWAVTAAHCV-----EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD 478
           L  + W +TAAH +     E    + L + LG  ++    +   +  RRV +   + Q +
Sbjct: 185 LLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDE 244
Query: 479 PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYE 528
              FE D+ALL     V   PN++PIC+P++DT + +G   +V+G+G + E
Sbjct: 245 SYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE 295

>pdb|2A0Q|B Chain B, Structure Of Thrombin In 400 Mm Potassium Chloride Length = 257

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYEANIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1SFQ|B Chain B, Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack Length = 259

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYEANIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|2OD3|B Chain B, Human Thrombin Chimera With Human Residues 184a, 186, 186a, 186b, 186c And 222 Replaced By Murine Thrombin Equivalents Length = 259

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1BHX|B Chain B, X-Ray Structure Of The Complex Of Human Alpha Thrombin With The Inhibitor Sdz 229-357 Length = 147

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1TQ0|B Chain B, Crystal Structure Of The Potent Anticoagulant Thrombin Mutant W215aE217A IN FREE FORM Length = 257

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1H8D|H Chain H, X-Ray Structure Of The Human Alpha-Thrombin Complex With A Tripeptide Phosphonate Inhibitor Length = 260

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 20/163 (12%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYEGRFRRSYGHPATRQ 542
           +C+P+ +T       G    VTGWG L E       G P+  Q
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKET------GQPSVLQ 154

>pdb|1B7X|B Chain B, Structure Of Human Alpha-Thrombin Y225i Mutant Bound To D- Phe-Pro-Arg-Chloromethylketone Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1QUR|H Chain H, Human Alpha-Thrombin In Complex With Bivalent, Benzamidine-Based Synthetic Inhibitor Length = 257

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|3EE0|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF HUMAN Thrombin (Space Group P2(1)2(1)2(1)) Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1Z8I|B Chain B, Crystal Structure Of The Thrombin Mutant G193a Bound To Ppack Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1TWX|B Chain B, Crystal Structure Of The Thrombin Mutant D221aD222K Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1ABI|H Chain H, Structure Of The Hirulog 3-Thrombin Complex And Nature Of The S' Subsites Of Substrates And Inhibitors Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1WBG|B Chain B, Active Site Thrombin Inhibitors Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1BTH|H Chain H, Structure Of Thrombin Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1RD3|B Chain B, 2.5a Structure Of Anticoagulant Thrombin Variant E217k Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1GJ5|H Chain H, Selectivity At S1, H2o Displacement, Upa, Tpa, Ser190ALA190 PROTEASE, Structure-Based Drug Design Length = 258

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|2THF|B Chain B, Structure Of Human Alpha-thrombin Y225f Mutant Bound To D-phe-pro-arg- Chloromethylketone Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1JOU|B Chain B, Crystal Structure Of Native S195a Thrombin With An Unoccupied Active Site Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1Z8J|B Chain B, Crystal Structure Of The Thrombin Mutant G193p Bound To Ppack Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|2PGB|B Chain B, Inhibitor-Free Human Thrombin Mutant C191a-C220a Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|2BVR|H Chain H, Human Thrombin Complexed With Fragment-based Small Molecules Occupying The S1 Pocket Length = 252

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 20/163 (12%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYEGRFRRSYGHPATRQ 542
           +C+P+ +T       G    VTGWG L E       G P+  Q
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKEK------GQPSVLQ 154

>pdb|1THP|B Chain B, Structure Of Human Alpha-Thrombin Y225p Mutant Bound To D-Phe-Pro-Arg- Chloromethylketone Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1VZQ|H Chain H, Complex Of Thrombin With Designed Inhibitor 7165 Length = 250

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H  +  E     +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHSRTAYERNI-EKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1DX5|M Chain M, Crystal Structure Of The Thrombin-Thrombomodulin Complex Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 16/150 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP-------S 443
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+   PP       +
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLL-YPPWDKNFIEN 57
Query: 444 DLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNII 502
           DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I 
Sbjct: 58  DLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIH 116
Query: 503 PICVPEDDTNF----VGTSAHVTGWGRLYE 528
           P+C+P+ +T       G    VTGWG L E
Sbjct: 117 PVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|2XXL|A Chain A, Crystal Structure Of Drosophila Grass Clip Serine Protease Of Toll Pathway Length = 408

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 360 FIDESNEIESQGINMSNYKEV---CGRRLFPSSRIVGGEKATFGKWPWQISLR--QWIRS 414
           F   S  I+     MS +K+    CG   F S R+  G +      PW   LR  Q+  S
Sbjct: 87  FCCPSANIQHNSKVMSLFKDENFDCGN--FLSQRVSNGYEVKLSSRPWMALLRYQQFGES 144
Query: 415 TYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEE--PYGYQERRVQIVA 472
            +L  CG A+ +E + +TAAHCV  +      +RLGEH +STEE+    G +++    V 
Sbjct: 145 RFL--CGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVV 202
Query: 473 S--------HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD----TNFVGTSAHV 520
           +        H ++D R   +D+ALL+    V FQ +I PIC+P  D         ++  V
Sbjct: 203 NVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFV 262
Query: 521 TGWGRLYEG 529
           TGWG    G
Sbjct: 263 TGWGTTENG 271

>pdb|1ZHM|A Chain A, Crystal Structure Of The Catalytic Domain Of The Coagulation Factor Xia In Complex With Benzamidine (s434a- T475a-k437 Mutant) Length = 238

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + +++ +   +G QE     +  H Q+      YD+ALL+    V +  +  PIC+
Sbjct: 60  GILNQAEIAEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYADSQRPICL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + D N + T   VTGWG
Sbjct: 115 PSKGDRNVIYTDCWVTGWG 133

>pdb|1ZHM|A Chain A, Crystal Structure Of The Catalytic Domain Of The Coagulation Factor Xia In Complex With Benzamidine (s434a- T475a-k437 Mutant) Length = 238

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|2ANY|A Chain A, Expression, Crystallization And The Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLL-LRL 449
           IVGG ++++G+WPWQ+SL Q   +   H CG +L    W +TAAHC + +P  D+  +  
Sbjct: 1   IVGGTESSWGEWPWQVSL-QVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYS 59
Query: 450 GEHDLS--TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           G  +LS  T++ P+     +++ +  H  +      +D+AL++   P+++     PI +P
Sbjct: 60  GILELSDITKDTPF----SQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLP 115
Query: 508 -EDDTNFVGTSAHVTGWG 524
            + DT+ + T+  VTGWG
Sbjct: 116 SKGDTSTIYTNCWVTGWG 133

>pdb|2ANY|A Chain A, Expression, Crystallization And The Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 69/190 (36%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC-----VEDLW---- 613
           IVGG ++++G+WPWQ+SL Q   +   H CG +L    W +TAAHC     ++D+W    
Sbjct: 1   IVGGTESSWGEWPWQVSL-QVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYS 59
Query: 614 --------------SQIIPII--QNCRRRESNL--------------------------- 630
                         SQI  II  QN +  E N                            
Sbjct: 60  GILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGD 119
Query: 631 ------------WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAG 678
                       W  +   G + ++LQ+V++P++ N  C+  Y+       I +  +CAG
Sbjct: 120 TSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDY----KITQRMVCAG 175
Query: 679 WRKGSFDSCE 688
           +++G  D+C+
Sbjct: 176 YKEGGKDACK 185

>pdb|3JZ1|B Chain B, Crystal Structure Of Human Thrombin Mutant N143p In E:na+ Form Length = 259

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGPLKE 146

>pdb|1XX9|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Ecotinm84r Length = 238

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + ++  +   +G QE     +  H Q+      YD+ALL+    V +  +  PIC+
Sbjct: 60  GILNQSEIKEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + D N + T   VTGWG
Sbjct: 115 PSKGDRNVIYTDCWVTGWG 133

>pdb|1XX9|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Ecotinm84r Length = 238

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|4IGD|A Chain A, Crystal Structure Of The Zymogen Catalytic Region Of Human Masp-1 Length = 406

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 93/216 (43%), Gaps = 42/216 (19%)
Query: 380 VCG-----RRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAA 434
           VCG     R+L   ++I  G  A  G  PW   L       +   CG +L   +W VTAA
Sbjct: 142 VCGLPKFSRKLM--AQIFNGRPAQKGTTPWIAMLSHLNGQPF---CGGSLLGSSWIVTAA 196
Query: 435 HCV------ED--------VPPSDLLLRLGEH-DLSTEEEPYGYQERRVQIVASHPQFDP 479
           HC+      ED        + PSD  + LG+H  L ++E     Q   V+    HPQ+DP
Sbjct: 197 HCLHQSLDPEDPTLRDSDLLSPSDFKIILGKHWRLRSDENE---QHLGVKHTTLHPQYDP 253
Query: 480 RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPA 539
            TFE D+AL+   E       ++PIC+PE      G    V+GWG+ +  RF      P 
Sbjct: 254 NTFENDVALVELLESPVLNAFVMPICLPEGPQQ-EGAMVIVSGWGKQFLQRF------PE 306
Query: 540 TRQEM-------ATCWNHFLGNRILFPSSRIVGGEK 568
           T  E+       +TC   +   +       I  GEK
Sbjct: 307 TLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICAGEK 342

>pdb|2ZEB|A Chain A, Potent, Nonpeptide Inhibitors Of Human Mast Cell Tryptase Length = 243

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           IVGG++A   KWPWQ+SLR  +   Y +H CG +L +  W +TAAHCV         LR 
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALR- 57
Query: 450 GEHDLSTEEEPYGYQERRVQI--VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
               +   E+   YQ++ + +  +  HPQF       D+ALL   EPVK   ++  + +P
Sbjct: 58  ----VQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLP 113
Query: 508 EDDTNF-VGTSAHVTGWGRL 526
                F  G    VTGWG +
Sbjct: 114 PASETFPPGMPCWVTGWGDV 133

>pdb|2ZEB|A Chain A, Potent, Nonpeptide Inhibitors Of Human Mast Cell Tryptase Length = 243

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCV 609
           IVGG++A   KWPWQ+SLR  +   Y +H CG +L +  W +TAAHCV
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VHGPYWMHFCGGSLIHPQWVLTAAHCV 46

>pdb|1A0L|A Chain A, Human Beta-Tryptase: A Ring-Like Tetramer With Active Sites Facing A Central Pore Length = 244

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCV-EDVPP-SDLLL 447
           IVGG++A   KWPWQ+SLR  +   Y +H CG +L +  W +TAAHCV  DV   + L +
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRV 58
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           +L E  L  ++     Q   V  +  HPQF       D+ALL   EPVK   ++  + +P
Sbjct: 59  QLREQHLYYQD-----QLLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLP 113
Query: 508 EDDTNF-VGTSAHVTGWG 524
                F  G    VTGWG
Sbjct: 114 PASETFPPGMPCWVTGWG 131

>pdb|1A0L|A Chain A, Human Beta-Tryptase: A Ring-Like Tetramer With Active Sites Facing A Central Pore Length = 244

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCV 609
           IVGG++A   KWPWQ+SLR  +   Y +H CG +L +  W +TAAHCV
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VHGPYWMHFCGGSLIHPQWVLTAAHCV 46

>pdb|2BM2|A Chain A, Human Beta-Ii Tryptase In Complex With 4-(3-Aminomethyl- Phenyl)-Piperidin-1-Yl-(5-Phenethyl- Pyridin-3-Yl)- Methanone Length = 245

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           IVGG++A   KWPWQ+SLR  +   Y +H CG +L +  W +TAAHCV        +  L
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VHGPYWMHFCGGSLIHPQWVLTAAHCV-----GPDVKDL 53
Query: 450 GEHDLSTEEEPYGYQERRVQI--VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
               +   E+   YQ++ + +  +  HPQF       D+ALL   EPVK   ++  + +P
Sbjct: 54  AALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLP 113
Query: 508 EDDTNF-VGTSAHVTGWG 524
                F  G    VTGWG
Sbjct: 114 PASETFPPGMPCWVTGWG 131

>pdb|2BM2|A Chain A, Human Beta-Ii Tryptase In Complex With 4-(3-Aminomethyl- Phenyl)-Piperidin-1-Yl-(5-Phenethyl- Pyridin-3-Yl)- Methanone Length = 245

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCV 609
           IVGG++A   KWPWQ+SLR  +   Y +H CG +L +  W +TAAHCV
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VHGPYWMHFCGGSLIHPQWVLTAAHCV 46

>pdb|1ZHP|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-K505 Mutant) Length = 238

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + ++  +   +G QE     +  H Q+      YD+ALL+    V +  +  PIC+
Sbjct: 60  GILNQAEIKEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYADSQRPICL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + D N + T   VTGWG
Sbjct: 115 PSKGDRNVIYTDCWVTGWG 133

>pdb|1ZHP|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-K505 Mutant) Length = 238

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|1XXD|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Mutated Ecotin Length = 238

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + ++  +   +G QE     +  H Q+      YD+ALL+    V +  +  PIC+
Sbjct: 60  GILNQAEIKEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYADSQRPICL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + D N + T   VTGWG
Sbjct: 115 PSKGDRNVIYTDCWVTGWG 133

>pdb|1XXD|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Mutated Ecotin Length = 238

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|2ANW|A Chain A, Expression, Crystallization And Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLL-LRL 449
           IVGG  +++G+WPWQ+SL Q   +   H CG +L    W +TAAHC + +P  D+  +  
Sbjct: 1   IVGGTNSSWGEWPWQVSL-QVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYS 59
Query: 450 GEHDLS--TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           G  +LS  T++ P+     +++ +  H  +      +D+AL++   P+ +     PI +P
Sbjct: 60  GILNLSDITKDTPF----SQIKEIIIHQNYKVSEGNHDIALIKLQAPLNYTEFQKPISLP 115
Query: 508 -EDDTNFVGTSAHVTGWG 524
            + DT+ + T+  VTGWG
Sbjct: 116 SKGDTSTIYTNCWVTGWG 133

>pdb|2ANW|A Chain A, Expression, Crystallization And Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 69/190 (36%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC-----VEDLW---- 613
           IVGG  +++G+WPWQ+SL Q   +   H CG +L    W +TAAHC     ++D+W    
Sbjct: 1   IVGGTNSSWGEWPWQVSL-QVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYS 59
Query: 614 --------------SQIIPII--QNCRRRESNL--------------------------- 630
                         SQI  II  QN +  E N                            
Sbjct: 60  GILNLSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLNYTEFQKPISLPSKGD 119
Query: 631 ------------WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAG 678
                       W  +   G + ++LQ+V++P++ N  C+  Y+       I +  +CAG
Sbjct: 120 TSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDY----KITQRMVCAG 175
Query: 679 WRKGSFDSCE 688
           +++G  D+C+
Sbjct: 176 YKEGGKDACK 185

>pdb|3GIC|B Chain B, Structure Of Thrombin Mutant Delta(146-149e) In The Free Form Length = 250

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 14/147 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRL 526
           +C+P+ +T       G    VTGWG L
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNL 144

>pdb|3EDX|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF MURINE THROMBIN Length = 258

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGWDAEKGIAPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+ALL+  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNVEKISMLEKIYVHPRYNWRENLDRDIALLKLKKPVPFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+  T       G    VTGWG L E
Sbjct: 118 VCLPDKQTVTSLLRAGYKGRVTGWGNLRE 146

>pdb|2PUX|B Chain B, Crystal Structure Of Murine Thrombin In Complex With The Extracellular Fragment Of Murine Par3 Length = 258

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGWDAEKGIAPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+ALL+  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNVEKISMLEKIYVHPRYNWRENLDRDIALLKLKKPVPFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+  T       G    VTGWG L E
Sbjct: 118 VCLPDKQTVTSLLRAGYKGRVTGWGNLRE 146

>pdb|1VR1|H Chain H, Specifity For Plasminogen Activator Inhibitor-1 Length = 261

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHK--CGAALFNENWAVTAAHCV------EDVPP 442
           IV G  A  G  PWQ+ L    R +   +  CGA+L ++ W +TAAHC+      ++   
Sbjct: 1   IVEGSDAEIGMSPWQVMLFAKHRRSPGERFLCGASLISDRWVLTAAHCLLYPPWDKNFTE 60
Query: 443 SDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNI 501
           +DLL+R+G+H   T  E    +   ++ +  HP+++ R   + D+AL++  +PV F   I
Sbjct: 61  NDLLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYI 119
Query: 502 IPICVPEDDTNF----VGTSAHVTGWGRLYE 528
            P+C+P+ +T       G    VTGWG L E
Sbjct: 120 HPVCLPDRETAASLLQAGYKGRVTGWGNLKE 150

>pdb|1ELT|A Chain A, Structure Of Native Pancreatic Elastase From North Atlantic Salmon At 1.61 Angstroms Resolution Length = 236

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG  A    WPWQISL+    S+Y H CG +L  + W +TAAHCV+      ++  LG
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSARTWRVV--LG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+L+T E            + S    D     YD+ALLR          +    +P  +
Sbjct: 59  EHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSN 118
Query: 511 TNFVGTS-AHVTGWGRLYEG 529
                 +  ++TGWG+   G
Sbjct: 119 QILPNNNPCYITGWGKTSTG 138

>pdb|1ELT|A Chain A, Structure Of Native Pancreatic Elastase From North Atlantic Salmon At 1.61 Angstroms Resolution Length = 236

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG  A    WPWQISL+    S+Y H CG +L  + W +TAAHCV+ 
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS 49

>pdb|2OCV|B Chain B, Structural Basis Of Na+ Activation Mimicry In Murine Thrombin Length = 259

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGWDAEKGIAPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + D+ALL+  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNVEKISMLEKIYVHPRYNWRENLDRDIALLKLKKPVPFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+  T       G    VTGWG L E
Sbjct: 118 VCLPDKQTVTSLLRAGYKGRVTGWGNLRE 146

>pdb|2GP9|B Chain B, Crystal Structure Of The Slow Form Of Thrombin In A Self- Inhibited Conformation Length = 259

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H   T  E    +   ++ +  HP+++ R   + ++AL++  +PV F   I P
Sbjct: 59  LLVRIGKHS-RTRYERNIEKISMLEKIYIHPRYNWRENLDRNIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNF----VGTSAHVTGWGRLYE 528
           +C+P+ +T       G    VTGWG L E
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1EAI|A Chain A, Complex Of Ascaris Chymotrpsin/elastase Inhibitor With Porcine Elastase Length = 240

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+     +L  R  
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD----RELTFRVV 56
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQF--DPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           +GEH+L+  +    Y    VQ +  HP +  D     YD+ALLR  + V     +    +
Sbjct: 57  VGEHNLNQNDGTEQYVG--VQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 114
Query: 507 PEDDTNFVGTS-AHVTGWG 524
           P   T     S  ++TGWG
Sbjct: 115 PRAGTILANNSPCYITGWG 133

>pdb|1EAI|A Chain A, Complex Of Ascaris Chymotrpsin/elastase Inhibitor With Porcine Elastase Length = 240

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD 48

>pdb|3DFJ|A Chain A, Crystal Structure Of Human Prostasin Length = 263

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTY--LHKCGAALFNENWAVTAAHCVEDVPPSD---- 444
           I GG  A  G+WPWQ+S+      TY  +H CG +L +E W ++AAHC     PS+    
Sbjct: 1   ITGGSSAVAGQWPWQVSI------TYEGVHVCGGSLVSEQWVLSAAHCF----PSEHHKE 50
Query: 445 -LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIP 503
              ++LG H L +  E    +   ++ +  HP +     + D+ALL+   P+ F   I P
Sbjct: 51  AYEVKLGAHQLDSYSE--DAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRP 108
Query: 504 ICVPEDDTNFV-GTSAHVTGWGRL 526
           I +P  + +F  G    VTGWG +
Sbjct: 109 ISLPAANASFPNGLHCTVTGWGHV 132

>pdb|3DFJ|A Chain A, Crystal Structure Of Human Prostasin Length = 263

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 8/48 (16%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTY--LHKCGAALFNENWAVTAAHC 608
           I GG  A  G+WPWQ+S+      TY  +H CG +L +E W ++AAHC
Sbjct: 1   ITGGSSAVAGQWPWQVSI------TYEGVHVCGGSLVSEQWVLSAAHC 42

>pdb|2EST|E Chain E, Crystallographic Study Of The Binding Of A Trifluoroacetyl Dipeptide Anilide Inhibitor With Elastase Length = 240

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+     +L  R  
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR----ELTFRVV 56
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQF--DPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           +GEH+L+       Y    VQ +  HP +  D     YD+ALLR  + V     +    +
Sbjct: 57  VGEHNLNQNNGTEQYVG--VQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 114
Query: 507 PEDDTNFVGTS-AHVTGWG 524
           P   T     S  ++TGWG
Sbjct: 115 PRAGTILANNSPCYITGWG 133

>pdb|2EST|E Chain E, Crystallographic Study Of The Binding Of A Trifluoroacetyl Dipeptide Anilide Inhibitor With Elastase Length = 240

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD 48

>pdb|2QY0|B Chain B, Active Dimeric Structure Of The Catalytic Domain Of C1r Reveals Enzyme-product Like Contacts Length = 242

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLH-KCGAALFNENWAVTAAHCV-----EDVPPSD 444
           I+GG+KA  G +PWQ+        T +H + G AL  + W +TAAH +     E    + 
Sbjct: 1   IIGGQKAKMGNFPWQVF-------TNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNAS 53
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
           L + LG  ++    +   +  RRV +   + Q +   FE D+ALL     V   PN++PI
Sbjct: 54  LDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPI 113
Query: 505 CVPEDDTNF-VGTSAHVTGWGRLYE 528
           C+P++DT + +G   +V+G+G + E
Sbjct: 114 CLPDNDTFYDLGLMGYVSGFGVMEE 138

>pdb|2F9O|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant D216g Length = 245

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCV-EDVPP-SDLLL 447
           IVGG++A   KWPWQ+SLR  +R  Y +H CG +L +  W +TAAHCV  DV   + L +
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRV 58
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           +L E  L  ++     Q   V  +  HPQF       D+ALL   EPV     +  + +P
Sbjct: 59  QLREQHLYYQD-----QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLP 113
Query: 508 EDDTNF-VGTSAHVTGWG 524
                F  G    VTGWG
Sbjct: 114 PASETFPPGMPCWVTGWG 131

>pdb|2F9O|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant D216g Length = 245

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCV 609
           IVGG++A   KWPWQ+SLR  +R  Y +H CG +L +  W +TAAHCV
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VRDRYWMHFCGGSLIHPQWVLTAAHCV 46

>pdb|3GYL|B Chain B, Structure Of Prostasin At 1.3 Angstroms Resolution In Complex With A Calcium Ion. Length = 261

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTY--LHKCGAALFNENWAVTAAHCVEDVPPSD---- 444
           I GG  A  G+WPWQ+S+      TY  +H CG +L +E W ++AAHC     PS+    
Sbjct: 1   ITGGSSAVAGQWPWQVSI------TYEGVHVCGGSLVSEQWVLSAAHCF----PSEHHKE 50
Query: 445 -LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIP 503
              ++LG H L +  E    +   ++ +  HP +     + D+ALL+   P+ F   I P
Sbjct: 51  AYEVKLGAHQLDSYSE--DAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRP 108
Query: 504 ICVPEDDTNFV-GTSAHVTGWGRL 526
           I +P    +F  G    VTGWG +
Sbjct: 109 ISLPAAQASFPNGLHCTVTGWGHV 132

>pdb|3GYL|B Chain B, Structure Of Prostasin At 1.3 Angstroms Resolution In Complex With A Calcium Ion. Length = 261

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 8/48 (16%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTY--LHKCGAALFNENWAVTAAHC 608
           I GG  A  G+WPWQ+S+      TY  +H CG +L +E W ++AAHC
Sbjct: 1   ITGGSSAVAGQWPWQVSI------TYEGVHVCGGSLVSEQWVLSAAHC 42

>pdb|3E0P|B Chain B, The X-Ray Structure Of Human Prostasin In Complex With A Covalent Benzoxazole Inhibitor Length = 271

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTY--LHKCGAALFNENWAVTAAHCVEDVPPSD---- 444
           I GG  A  G+WPWQ+S+      TY  +H CG +L +E W ++AAHC     PS+    
Sbjct: 1   ITGGSSAVAGQWPWQVSI------TYEGVHVCGGSLVSEQWVLSAAHCF----PSEHHKE 50
Query: 445 -LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIP 503
              ++LG H L +  E    +   ++ +  HP +     + D+ALL+   P+ F   I P
Sbjct: 51  AYEVKLGAHQLDSYSE--DAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRP 108
Query: 504 ICVPEDDTNFV-GTSAHVTGWGRL 526
           I +P    +F  G    VTGWG +
Sbjct: 109 ISLPAAQASFPNGLHCTVTGWGHV 132

>pdb|3E0P|B Chain B, The X-Ray Structure Of Human Prostasin In Complex With A Covalent Benzoxazole Inhibitor Length = 271

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 8/48 (16%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTY--LHKCGAALFNENWAVTAAHC 608
           I GG  A  G+WPWQ+S+      TY  +H CG +L +E W ++AAHC
Sbjct: 1   ITGGSSAVAGQWPWQVSI------TYEGVHVCGGSLVSEQWVLSAAHC 42

>pdb|2F9N|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant K192qD216G IN COMPLEX WITH LEUPEPTIN Length = 245

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCV-EDVPP-SDLLL 447
           IVGG++A   KWPWQ+SLR  +R  Y +H CG +L +  W +TAAHCV  DV   + L +
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRV 58
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           +L E  L  ++     Q   V  +  HPQF       D+ALL   EPV     +  + +P
Sbjct: 59  QLREQHLYYQD-----QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLP 113
Query: 508 EDDTNF-VGTSAHVTGWG 524
                F  G    VTGWG
Sbjct: 114 PASETFPPGMPCWVTGWG 131

>pdb|2F9N|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant K192qD216G IN COMPLEX WITH LEUPEPTIN Length = 245

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCV 609
           IVGG++A   KWPWQ+SLR  +R  Y +H CG +L +  W +TAAHCV
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VRDRYWMHFCGGSLIHPQWVLTAAHCV 46

>pdb|1CO7|E Chain E, R117h Mutant Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 245

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           +IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RL
Sbjct: 22  KIVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRL 72
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GEH+++  E     Q      +  HP FD +T   D+ L++   PVK   ++  + +P  
Sbjct: 73  GEHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNAHVATVALPS- 129
Query: 510 DTNFVGTSAHVTGWGR 525
                GT   ++GWG 
Sbjct: 130 SCAPAGTQCLISGWGN 145

>pdb|1CO7|E Chain E, R117h Mutant Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 245

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 551 FLGNRILFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 607
            +G  + FP     +IVGG        P+Q+SL     S Y H CG +L N+ W V+AAH
Sbjct: 8   LVGAAVAFPVDDDDKIVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAH 62
Query: 608 C 608
           C
Sbjct: 63  C 63

>pdb|1LTO|A Chain A, Human Alpha1-Tryptase Length = 245

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHC----VEDVPPSDL 445
           IVGG++A   KWPWQ+SLR  +R  Y +H CG +L +  W +TAAHC    V+D+  + L
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VRDRYWMHFCGGSLIHPQWVLTAAHCLGPDVKDL--ATL 56
Query: 446 LLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC 505
            ++L E  L  ++     Q   V  +  HPQF       D+ALL   EPV     +  + 
Sbjct: 57  RVQLREQHLYYQD-----QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVM 111
Query: 506 VPEDDTNF-VGTSAHVTGWG 524
           +P     F  G    VTGWG
Sbjct: 112 LPPASETFPPGMPCWVTGWG 131

>pdb|1LTO|A Chain A, Human Alpha1-Tryptase Length = 245

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCV 609
           IVGG++A   KWPWQ+SLR  +R  Y +H CG +L +  W +TAAHC+
Sbjct: 1   IVGGQEAPRSKWPWQVSLR--VRDRYWMHFCGGSLIHPQWVLTAAHCL 46

>pdb|2B9L|A Chain A, Crystal Structure Of Prophenoloxidase Activating Factor-Ii From The Beetle Holotrichia Diomphalia Length = 394

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 396 KATFGKWPWQISLRQWIRSTYLHK-------CGAALFNENWAVTAAHCVEDVPPS--DLL 446
           +A +G++PW +++   +++  +         CG +L   +  +T AHCV     +   + 
Sbjct: 136 EAEYGEFPWMVAV---LKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIK 192
Query: 447 LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           +R GE D  TE+E   YQER+++ V  H  F+P+T   D+ALL    P+    NI  IC+
Sbjct: 193 IRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICL 252
Query: 507 PEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMAT 546
           P+    F  T    +GWG+   G  R  Y +   + ++ T
Sbjct: 253 PQQSQIFDSTECFASGWGKKEFGS-RHRYSNILKKIQLPT 291

>pdb|1MKW|K Chain K, The Co-Crystal Structure Of Unliganded Bovine Alpha- Thrombin And Prethrombin-2: Movement Of The Yppw Segment And Active Site Residues Upon Ligand Binding Length = 308

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 31/163 (19%)
Query: 383 RRLFPS---SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
           + LF S    RIV G+ A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+  
Sbjct: 39  KELFESYIEGRIVEGQDAEVGLSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLL- 95
Query: 440 VPP-------SDLLLRLGEHDLSTEEEPYGYQERRVQIVAS------HPQFD-PRTFEYD 485
            PP        DLL+R+G+H  +         ER+V+ ++       HP+++     + D
Sbjct: 96  YPPWDKNFTVDDLLVRIGKHSRTR-------YERKVEKISMLDKIYIHPRYNWKENLDRD 148
Query: 486 LALLRFYEPVKFQPNIIPICVPEDDTN----FVGTSAHVTGWG 524
           +ALL+   P++    I P+C+P+  T       G    VTGWG
Sbjct: 149 IALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWG 191

>pdb|1MKW|K Chain K, The Co-Crystal Structure Of Unliganded Bovine Alpha- Thrombin And Prethrombin-2: Movement Of The Yppw Segment And Active Site Residues Upon Ligand Binding Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           +   RIV G+ A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+
Sbjct: 45  YIEGRIVEGQDAEVGLSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCL 94

>pdb|3TGJ|E Chain E, S195a Trypsinogen Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 233

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           +IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RL
Sbjct: 10  KIVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRL 60
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GEH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P  
Sbjct: 61  GEHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPS- 117
Query: 510 DTNFVGTSAHVTGWGR 525
                GT   ++GWG 
Sbjct: 118 SCAPAGTQCLISGWGN 133

>pdb|1HAX|B Chain B, Snapshots Of Serine Protease Catalysis: (A) Acyl-Enzyme Intermediate Between Porcine Pancreatic Elastase And Human Beta-Casomorphin-7 At Ph 5 Length = 240

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+     +L  R  
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR----ELTFRVV 56
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQF--DPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           +GEH+L+       Y    VQ +  HP +  D     YD+ALLR  + V     +    +
Sbjct: 57  VGEHNLNQNNGTEQYVG--VQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 114
Query: 507 PEDDTNFVGTS-AHVTGWG 524
           P   T     S  ++TGWG
Sbjct: 115 PRAGTILRNNSPCYITGWG 133

>pdb|1HAX|B Chain B, Snapshots Of Serine Protease Catalysis: (A) Acyl-Enzyme Intermediate Between Porcine Pancreatic Elastase And Human Beta-Casomorphin-7 At Ph 5 Length = 240

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD 48

>pdb|1ZPZ|A Chain A, Factor Xi Catalytic Domain Complexed With N-((R)-1-(4- Bromophenyl)ethyl)urea-Asn-Val-Arg-Alpha-Ketothiazole Length = 238

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + +++ +   +G QE     +  H Q+      YD+ALL+    V +  +  PI +
Sbjct: 60  GILNQSEIAEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + D N + T   VTGWG
Sbjct: 115 PSKGDRNVIYTDCWVTGWG 133

>pdb|1ZPZ|A Chain A, Factor Xi Catalytic Domain Complexed With N-((R)-1-(4- Bromophenyl)ethyl)urea-Asn-Val-Arg-Alpha-Ketothiazole Length = 238

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|3GOV|B Chain B, Crystal Structure Of The Catalytic Region Of Human Masp-1 Length = 251

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED----------- 439
           I  G  A  G  PW   L       +   CG +L   +W VTAAHC+             
Sbjct: 1   IFNGRPAQKGTTPWIAMLSHLNGQPF---CGGSLLGSSWIVTAAHCLHQSLDPKDPTLRD 57
Query: 440 ---VPPSDLLLRLGEH-DLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 495
              + PSD  + LG+H  L ++E     Q   V+    HPQ+DP TFE D+AL+   E  
Sbjct: 58  SDLLSPSDFKIILGKHWRLRSDEN---EQHLGVKHTTLHPQYDPNTFENDVALVELLESP 114
Query: 496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM-------ATCW 548
                ++PIC+PE      G    V+GWG+ +  RF      P T  E+       +TC 
Sbjct: 115 VLNAFVMPICLPEGPQQ-EGAMVIVSGWGKQFLQRF------PETLMEIEIPIVDHSTCQ 167
Query: 549 NHFLGNRILFPSSRIVGGEK 568
             +   +       I  GEK
Sbjct: 168 KAYAPLKKKVTRDMICAGEK 187

>pdb|1ZLR|A Chain A, Factor Xi Catalytic Domain Complexed With 2-Guanidino-1-(4-(4,4,5,5- Tetramethyl-1,3,2-Dioxaborolan-2-Yl)phenyl)ethyl Nicotinate Length = 237

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + +++ +   +G QE     +  H Q+      YD+ALL+    V +  +  PI +
Sbjct: 60  GILNQAEIAEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYADSQRPISL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + D N + T   VTGWG
Sbjct: 115 PSKGDRNVIYTDCWVTGWG 133

>pdb|1ZLR|A Chain A, Factor Xi Catalytic Domain Complexed With 2-Guanidino-1-(4-(4,4,5,5- Tetramethyl-1,3,2-Dioxaborolan-2-Yl)phenyl)ethyl Nicotinate Length = 237

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|1ZHR|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-C482s-K437a Mutant) Length = 238

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + +++ +   +G QE     +  H Q+      YD+ALL+    V +  +  PI +
Sbjct: 60  GILNQAEIAEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYADSQRPISL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + D N + T   VTGWG
Sbjct: 115 PSKGDRNVIYTDCWVTGWG 133

>pdb|1ZHR|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-C482s-K437a Mutant) Length = 238

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|3SOR|A Chain A, Factor Xia In Complex With A Clorophenyl-tetrazole Inhibitor Length = 238

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + ++  +   +G QE     +  H Q+      YD+ALL+    V +  +  PI +
Sbjct: 60  GILNQSEIKEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + D N + T   VTGWG
Sbjct: 115 PSKGDRNVIYTDCWVTGWG 133

>pdb|3SOR|A Chain A, Factor Xia In Complex With A Clorophenyl-tetrazole Inhibitor Length = 238

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|1F7Z|A Chain A, Rat Trypsinogen K15a Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 233

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 11  IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 61
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 62  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPS-S 118
Query: 511 TNFVGTSAHVTGWGR 525
               GT   ++GWG 
Sbjct: 119 CAPAGTQCLISGWGN 133

>pdb|1ZJD|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Kunitz Protease Inhibitor Domain Of Protease Nexin Ii Length = 237

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + ++  +   +G QE     +  H Q+      YD+ALL+    V +  +  PI +
Sbjct: 60  GILNQAEIKEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYADSQRPISL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + D N + T   VTGWG
Sbjct: 115 PSKGDRNVIYTDCWVTGWG 133

>pdb|1ZJD|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Kunitz Protease Inhibitor Domain Of Protease Nexin Ii Length = 237

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|1BBR|H Chain H, The Structure Of Residues 7-16 Of The A Alpha Chain Of Human Fibrinogen Bound To Bovine Thrombin At 2.3 Angstroms Resolution Length = 150

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 28/156 (17%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP-------S 443
           IV G+ A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+   PP        
Sbjct: 1   IVEGQDAEVGLSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLL-YPPWDKNFTVD 57
Query: 444 DLLLRLGEHDLSTEEEPYGYQERRVQIVAS------HPQFD-PRTFEYDLALLRFYEPVK 496
           DLL+R+G+H  +         ER+V+ ++       HP+++     + D+ALL+   P++
Sbjct: 58  DLLVRIGKHSRTR-------YERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIE 110
Query: 497 FQPNIIPICVPEDDTN----FVGTSAHVTGWGRLYE 528
               I P+C+P+  T       G    VTGWG   E
Sbjct: 111 LSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNRRE 146

>pdb|1SLW|B Chain B, Rat Anionic N143h, E151h Trypsin Complexed To A86h Ecotin; Nickel- Bound Length = 223

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  I +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATIALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1ID5|H Chain H, Crystal Structure Of Bovine Thrombin Complex With Protease Inhibitor Ecotin Length = 256

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 28/152 (18%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP-------S 443
           IV G+ A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+   PP        
Sbjct: 1   IVEGQDAEVGLSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLL-YPPWDKNFTVD 57
Query: 444 DLLLRLGEHDLSTEEEPYGYQERRVQIVAS------HPQFD-PRTFEYDLALLRFYEPVK 496
           DLL+R+G+H  +         ER+V+ ++       HP+++     + D+ALL+   P++
Sbjct: 58  DLLVRIGKHSRTR-------YERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIE 110
Query: 497 FQPNIIPICVPEDDTN----FVGTSAHVTGWG 524
               I P+C+P+  T       G    VTGWG
Sbjct: 111 LSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWG 142

>pdb|1ANC|A Chain A, Anionic Trypsin Mutant With Ser 214 Replaced By Lys Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1K9O|E Chain E, Crystal Structure Of Michaelis Serpin-Trypsin Complex Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1BBR|K Chain K, The Structure Of Residues 7-16 Of The A Alpha Chain Of Human Fibrinogen Bound To Bovine Thrombin At 2.3 Angstroms Resolution Length = 259

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 28/152 (18%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP-------S 443
           IV G+ A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+   PP        
Sbjct: 1   IVEGQDAEVGLSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLL-YPPWDKNFTVD 57
Query: 444 DLLLRLGEHDLSTEEEPYGYQERRVQIVAS------HPQFD-PRTFEYDLALLRFYEPVK 496
           DLL+R+G+H  +         ER+V+ ++       HP+++     + D+ALL+   P++
Sbjct: 58  DLLVRIGKHSRTR-------YERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIE 110
Query: 497 FQPNIIPICVPEDDTN----FVGTSAHVTGWG 524
               I P+C+P+  T       G    VTGWG
Sbjct: 111 LSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWG 142

>pdb|3TGI|E Chain E, Wild-Type Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1BRB|E Chain E, Crystal Structures Of Rat Anionic Trypsin Complexed With The Protein Inhibitors Appi And Bpti Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1SLX|B Chain B, Rat Anionic N143h, E151h Trypsin Complexed To A86h Ecotin; Zinc-Bound Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1ANB|A Chain A, Anionic Trypsin Mutant With Ser 214 Replaced By Glu Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1DPO|A Chain A, Structure Of Rat Trypsin Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1AND|A Chain A, Anionic Trypsin Mutant With Arg 96 Replaced By His Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDHKTLNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1EKB|B Chain B, The Serine Protease Domain Of Enteropeptidase Bound To Inhibitor Val- Asp-asp-asp-asp-lys-chloromethane Length = 235

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV--EDVPPSDLLLR 448
           IVGG  +  G WPW ++L           CGA+L + +W V+AAHCV   ++ PS     
Sbjct: 1   IVGGSDSREGAWPWVVALY----FDDQQVCGASLVSRDWLVSAAHCVYGRNMEPSKWKAV 56
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           LG H  S    P   + R +  +  +P ++ R    D+A++     V +   I PIC+PE
Sbjct: 57  LGLHMASNLTSPQ-IETRLIDQIVINPHYNKRRKNNDIAMMHLEMKVNYTDYIQPICLPE 115
Query: 509 DDTNF-VGTSAHVTGWGRL-YEG 529
           ++  F  G    + GWG L Y+G
Sbjct: 116 ENQVFPPGRICSIAGWGALIYQG 138

>pdb|1AMH|A Chain A, Uncomplexed Rat Trypsin Mutant With Asp 189 Replaced With Ser (D189s) Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1J15|A Chain A, Benzamidine In Complex With Rat Trypsin Mutant X99175190RT Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD  T+  D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRETYNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1QL9|A Chain A, Factor Xa Specific Inhibitor In Complex With Rat Trypsin Mutant X99rt Length = 223

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD  T+  D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRETYNNDIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1FDP|A Chain A, Proenzyme Of Human Complement Factor D, Recombinant Profactor D Length = 235

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 387 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLL 446
           P  RI+GG +A     P+  S    ++    H CG  L  E W ++AAHC+ED     + 
Sbjct: 4   PRGRILGGREAEAHARPYMAS----VQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQ 59
Query: 447 LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           + LG H LS  E      +  V     HP   P T ++DL LL+  E     P + P+  
Sbjct: 60  VLLGAHSLSQPEPSKRLYD--VLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPW 117
Query: 507 PEDDTNFV-GTSAHVTGWGRL-YEGRFRRSYGH 537
              D +   GT   V GWG + + GR   S  H
Sbjct: 118 QRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQH 150

>pdb|3BG8|A Chain A, Crystal Structure Of Factor Xia In Complex With Clavatadine A Length = 238

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR-- 448
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V    +L    
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 449 --LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
             L + ++  +   +G QE     +  H Q+      YD+ALL+    V +  +  PI +
Sbjct: 60  GILNQSEIKEDTSFFGVQE-----IIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISL 114
Query: 507 P-EDDTNFVGTSAHVTGWG 524
           P + + N + T   VTGWG
Sbjct: 115 PSKGERNVIYTDCWVTGWG 133

>pdb|3BG8|A Chain A, Crystal Structure Of Factor Xia In Complex With Clavatadine A Length = 238

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC
Sbjct: 1   IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHC 45

>pdb|1BUI|B Chain B, Structure Of The Ternary Microplasmin-Staphylokinase-Microplasmin Complex: A Proteinase-Cofactor-Substrate Complex In Action Length = 250

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLL 447
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E  P PS   +
Sbjct: 19  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKV 75
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
            LG H      EP+  QE  V  +   P         D+ALL+   P      +IP C+P
Sbjct: 76  ILGAHQ-EVNLEPH-VQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLP 127
Query: 508 EDDTNFVG-TSAHVTGWG 524
             +      T   +TGWG
Sbjct: 128 SPNYVVADRTECFITGWG 145

>pdb|1BUI|B Chain B, Structure Of The Ternary Microplasmin-Staphylokinase-Microplasmin Complex: A Proteinase-Cofactor-Substrate Complex In Action Length = 250

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E 
Sbjct: 19  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEK 66

>pdb|1BML|A Chain A, Complex Of The Catalytic Domain Of Human Plasmin And Streptokinase Length = 250

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLL 447
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E  P PS   +
Sbjct: 19  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKV 75
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
            LG H      EP+  QE  V  +   P         D+ALL+   P      +IP C+P
Sbjct: 76  ILGAHQ-EVNLEPH-VQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLP 127
Query: 508 EDDTNFVG-TSAHVTGWG 524
             +      T   +TGWG
Sbjct: 128 SPNYVVADRTECFITGWG 145

>pdb|1BML|A Chain A, Complex Of The Catalytic Domain Of Human Plasmin And Streptokinase Length = 250

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E 
Sbjct: 19  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEK 66

>pdb|3UIR|A Chain A, Crystal Structure Of The Plasmin-Textilinin-1 Complex Length = 247

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLL 447
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E  P PS   +
Sbjct: 16  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKV 72
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
            LG H      EP+  QE  V  +   P         D+ALL+   P      +IP C+P
Sbjct: 73  ILGAHQ-EVNLEPH-VQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLP 124
Query: 508 EDDTNFVG-TSAHVTGWG 524
             +      T   +TGWG
Sbjct: 125 SPNYVVADRTECFITGWG 142

>pdb|3UIR|A Chain A, Crystal Structure Of The Plasmin-Textilinin-1 Complex Length = 247

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E 
Sbjct: 16  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEK 63

>pdb|1DDJ|A Chain A, Crystal Structure Of Human Plasminogen Catalytic Domain Length = 247

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLL 447
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E  P PS   +
Sbjct: 16  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKV 72
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
            LG H      EP+  QE  V  +   P         D+ALL+   P      +IP C+P
Sbjct: 73  ILGAHQ-EVNLEPH-VQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLP 124
Query: 508 EDDTNFVG-TSAHVTGWG 524
             +      T   +TGWG
Sbjct: 125 SPNYVVADRTECFITGWG 142

>pdb|1DDJ|A Chain A, Crystal Structure Of Human Plasminogen Catalytic Domain Length = 247

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E 
Sbjct: 16  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEK 63

>pdb|1L4D|A Chain A, Crystal Structure Of Microplasminogen-streptokinase Alpha Domain Complex Length = 249

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLL 447
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E  P PS   +
Sbjct: 18  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKV 74
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
            LG H      EP+  QE  V  +   P         D+ALL+   P      +IP C+P
Sbjct: 75  ILGAHQ-EVNLEPH-VQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLP 126
Query: 508 EDDTNFVG-TSAHVTGWG 524
             +      T   +TGWG
Sbjct: 127 SPNYVVADRTECFITGWG 144

>pdb|1L4D|A Chain A, Crystal Structure Of Microplasminogen-streptokinase Alpha Domain Complex Length = 249

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E 
Sbjct: 18  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEK 65

>pdb|1L4Z|A Chain A, X-Ray Crystal Structure Of The Complex Of Microplasminogen With Alpha Domain Of Streptokinase In The Presence Cadmium Ions Length = 248

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLL 447
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E  P PS   +
Sbjct: 17  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKV 73
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
            LG H      EP+  QE  V  +   P         D+ALL+   P      +IP C+P
Sbjct: 74  ILGAHQ-EVNLEPH-VQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLP 125
Query: 508 EDDTNFVG-TSAHVTGWG 524
             +      T   +TGWG
Sbjct: 126 SPNYVVADRTECFITGWG 143

>pdb|1L4Z|A Chain A, X-Ray Crystal Structure Of The Complex Of Microplasminogen With Alpha Domain Of Streptokinase In The Presence Cadmium Ions Length = 248

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E 
Sbjct: 17  GRVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEK 64

>pdb|1FXY|A Chain A, Coagulation Factor Xa-Trypsin Chimera Inhibited With D-Phe-Pro-Arg- Chloromethylketone Length = 228

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG     G+ PWQ  L   I       CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGYNCKDGEVPWQALL---INEENEGFCGGTILSEFYILTAAHCLYQA--KRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P  +P   
Sbjct: 56  --DRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAP 113
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 114 PA-TGTKCLISGWG 126

>pdb|4DUR|A Chain A, The X-Ray Crystal Structure Of Full-Length Type Ii Human Plasminogen Length = 791

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLR 448
           R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E  P PS   + 
Sbjct: 561 RVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVI 617
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           LG H      EP+  QE  V  +   P         D+ALL+   P      +IP C+P 
Sbjct: 618 LGAHQ-EVNLEPH-VQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLP- 668
Query: 509 DDTNFV---GTSAHVTGWGRLYEGRF 531
              N+V    T   +TGWG   +G F
Sbjct: 669 -SPNYVVADRTECFITGWGET-QGTF 692

>pdb|4DUR|A Chain A, The X-Ray Crystal Structure Of Full-Length Type Ii Human Plasminogen Length = 791

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E
Sbjct: 561 RVVGGCVAHPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLE 606

>pdb|1EQ9|A Chain A, Crystal Structure Of Fire Ant Chymotrypsin Complexed To Pmsf Length = 222

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLL-LRL 449
           IVGG+ A  GK+P+Q+SLR     +  H+CGA++ + N  +TAAHCV+ +   + L + +
Sbjct: 1   IVGGKDAPVGKYPYQVSLRL----SGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHV 56
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           G + LS   + Y  ++  V     +  +D      D+AL+    P+KF   + PI +  +
Sbjct: 57  GTNYLSESGDVYDVEDAVV-----NKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTN 111
Query: 510 DTNFVGTSAHVTGWG 524
           D +       +TGWG
Sbjct: 112 DEDLESNPCTLTGWG 126

>pdb|1EQ9|A Chain A, Crystal Structure Of Fire Ant Chymotrypsin Complexed To Pmsf Length = 222

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL 612
           IVGG+ A  GK+P+Q+SLR     +  H+CGA++ + N  +TAAHCV+ L
Sbjct: 1   IVGGKDAPVGKYPYQVSLRL----SGSHRCGASILDNNNVLTAAHCVDGL 46

>pdb|1QRZ|A Chain A, Catalytic Domain Of Plasminogen Length = 246

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLL 447
            R+VGG  A    WPWQ+SLR        H CG  L +  W +TAAHC+E  P PS   +
Sbjct: 15  GRVVGGCVAHPHSWPWQVSLRTRFGQ---HFCGGTLISPEWVLTAAHCLEKSPRPSSYKV 71
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
            LG H      EP+  QE  V  +   P         D+ALL+   P      +IP C+P
Sbjct: 72  ILGAHQ-EVNLEPH-VQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLP 123
Query: 508 EDDTNFVG-TSAHVTGWG 524
             +      T   +TGWG
Sbjct: 124 SPNYMVADRTECFITGWG 141

>pdb|1QRZ|A Chain A, Catalytic Domain Of Plasminogen Length = 246

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            R+VGG  A    WPWQ+SLR        H CG  L +  W +TAAHC+E 
Sbjct: 15  GRVVGGCVAHPHSWPWQVSLRTRFGQ---HFCGGTLISPEWVLTAAHCLEK 62

>pdb|1TRM|A Chain A, The Three-Dimensional Structure Of Asn102 Mutant Of Trypsin. Role Of Asp102 In Serine Protease Catalysis Length = 223

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   ++ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--NEQFVNAAKIIKHPNFDRKTLNNNIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1EZS|C Chain C, Crystal Structure Of Ecotin Mutant M84r, W67a, G68a, Y69a, D70a Bound To Rat Anionic Trypsin Ii Length = 223

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E     Q      +  HP FD +T   ++ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEG--DEQFVNAAKIIKHPNFDRKTLNNNIMLIKLSSPVKLNARVATVALPSSC 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 AP-AGTQCLISGWG 122

>pdb|1AKS|A Chain A, Crystal Structure Of The First Active Autolysate Form Of The Porcine Alpha Trypsin Length = 125

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     ++  H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCAANSIPYQVSL-----NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      + +HP F+  T + D+ L++   P      +  + +P   
Sbjct: 52  EHNIDVLEG--NEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-S 108
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 109 CAAAGTECLISGWG 122

>pdb|1RJX|B Chain B, Human Plasminogen Catalytic Domain, K698m Mutant Length = 247

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
           +VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E  P PS   + L
Sbjct: 18  VVGGCVAYPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVIL 74
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           G H      EP+  QE  V  +   P         D+ALL+   P      +IP C+P  
Sbjct: 75  GAHQ-EVNLEPH-VQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLPSP 126
Query: 510 DTNFVG-TSAHVTGWG 524
           +      T   +TGWG
Sbjct: 127 NYVVADRTECFITGWG 142

>pdb|1RJX|B Chain B, Human Plasminogen Catalytic Domain, K698m Mutant Length = 247

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E 
Sbjct: 18  VVGGCVAYPHSWPWQVSLRTRFG---MHFCGGTLISPEWVLTAAHCLEK 63

>pdb|1O5E|H Chain H, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (ala190 Upa) Length = 255

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG   + G+WPWQ+SLR        H CG +L + +W +TAAHC  +        R+ 
Sbjct: 1   IVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVF 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASH----PQFDPRTFE--YDLALLRFYEPVKFQPNIIPI 504
              ++ +  P+G Q   VQ V  H    P  DP + E   D+AL+    P+     I P+
Sbjct: 57  AGAVA-QASPHGLQ-LGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPV 114
Query: 505 CVPEDDTNFV-GTSAHVTGWG 524
           C+P      V G    VTGWG
Sbjct: 115 CLPAAGQALVDGKICTVTGWG 135

>pdb|1O5E|H Chain H, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (ala190 Upa) Length = 255

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG   + G+WPWQ+SLR        H CG +L + +W +TAAHC
Sbjct: 1   IVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHC 42

>pdb|1F5R|A Chain A, Rat Trypsinogen Mutant Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 231

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 393 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEH 452
           GG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLGEH
Sbjct: 11  GGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLGEH 61
Query: 453 DLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN 512
           +++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P     
Sbjct: 62  NINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 119
Query: 513 FVGTSAHVTGWG 524
             GT   ++GWG
Sbjct: 120 -AGTQCLISGWG 130

>pdb|1FY8|E Chain E, Crystal Structure Of The Deltaile16val17 Rat Anionic Trypsinogen-Bpti Complex Length = 231

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 393 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEH 452
           GG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLGEH
Sbjct: 11  GGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLGEH 61
Query: 453 DLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN 512
           +++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P     
Sbjct: 62  NINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 119
Query: 513 FVGTSAHVTGWG 524
             GT   ++GWG
Sbjct: 120 -AGTQCLISGWG 130

>pdb|3TGK|E Chain E, Trypsinogen Mutant D194n And Deletion Of Ile 16-Val 17 Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 231

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 393 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEH 452
           GG        P+Q+SL     S Y H CG +L N+ W V+AAHC +    S + +RLGEH
Sbjct: 11  GGYTCQENSVPYQVSLN----SGY-HFCGGSLINDQWVVSAAHCYK----SRIQVRLGEH 61
Query: 453 DLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN 512
           +++  E     Q      +  HP FD +T   D+ L++   PVK    +  + +P     
Sbjct: 62  NINVLEG--NEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP 119
Query: 513 FVGTSAHVTGWG 524
             GT   ++GWG
Sbjct: 120 -AGTQCLISGWG 130

>pdb|1UTJ|A Chain A, Trypsin Specificity As Elucidated By Lie Calculations, X-Ray Structures And Association Constant Measurements Length = 242

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           +IVGG +      P Q+SL     S Y H CG +L NENW V+AAHC +    S + +RL
Sbjct: 20  KIVGGYECKPYSQPHQVSLN----SGY-HFCGGSLVNENWVVSAAHCYK----SRVEVRL 70
Query: 450 GEHDLSTEE--EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           GEH++   E  E +    R ++    HP +     + D+ L++  +P      + P+ +P
Sbjct: 71  GEHNIKVTEGSEQFISSSRVIR----HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALP 126
Query: 508 EDDTNFVGTSAHVTGWGR 525
                  GT   V+GWG 
Sbjct: 127 TSCAP-AGTMCTVSGWGN 143

>pdb|1FIZ|A Chain A, Three Dimensional Structure Of Beta-Acrosin From Boar Spermatozoa Length = 263

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWI--RSTYLHKCGAALFNENWAVTAAHCVEDVPP-SDLLL 447
           +VGG  A  G WPW +SL+ ++   +   H CG  L N +W +TAAHC ++    +D  L
Sbjct: 1   VVGGMSAEPGAWPWMVSLQIFMYHNNRRYHTCGGILLNSHWVLTAAHCFKNKKKVTDWRL 60
Query: 448 RLGEHDL---STEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
             G +++   S +      QER V+ +  H ++       D+AL++   PV   P I P 
Sbjct: 61  IFGANEVVWGSNKPVKPPLQERFVEEIIIHEKYVSGLEINDIALIKITPPVPCGPFIGPG 120
Query: 505 CVPEDDTN--FVGTSAHVTGWGRLYEGRFRRS 534
           C+P+          +  VTGWG L E   R S
Sbjct: 121 CLPQFKAGPPRAPQTCWVTGWGYLKEKGPRTS 152

>pdb|1FIZ|A Chain A, Three Dimensional Structure Of Beta-Acrosin From Boar Spermatozoa Length = 263

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 563 IVGGEKATFGKWPWQISLRQWI--RSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG  A  G WPW +SL+ ++   +   H CG  L N +W +TAAHC ++
Sbjct: 1   VVGGMSAEPGAWPWMVSLQIFMYHNNRRYHTCGGILLNSHWVLTAAHCFKN 51

>pdb|4DGJ|A Chain A, Structure Of A Human Enteropeptidase Light Chain Variant Length = 235

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV--EDVPPSDLLLR 448
           IVGG  A  G WPW + L    R      CGA+L + +W V+AAHCV   ++ PS     
Sbjct: 1   IVGGSDAKEGAWPWVVGLYYDDRLL----CGASLVSSDWLVSAAHCVYGRNLEPSKWTAI 56
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           LG H  S    P     R +  +  +P ++ R  + D+A++     V +   I PI +PE
Sbjct: 57  LGLHMKSNLTSPQTV-PRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPE 115
Query: 509 DDTNF-VGTSAHVTGWGR-LYEG 529
           ++  F  G +  + GWG  +Y+G
Sbjct: 116 ENQVFPPGRNCSIAGWGTVVYQG 138

>pdb|4DGJ|A Chain A, Structure Of A Human Enteropeptidase Light Chain Variant Length = 235

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
           IVGG  A  G WPW + L    R      CGA+L + +W V+AAHCV
Sbjct: 1   IVGGSDAKEGAWPWVVGLYYDDRLL----CGASLVSSDWLVSAAHCV 43

>pdb|1DST|A Chain A, Mutant Of Factor D With Enhanced Catalytic Activity Length = 228

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+  S    ++    H CG  L  E W ++AAHC+ED     + + LG
Sbjct: 1   ILGGREAEAHARPYMAS----VQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVAS--HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            H LS + EP    +R   ++ +  HP + P T ++DL LL+  E     P + P+    
Sbjct: 57  AHSLS-QPEP---SKRLYDVLRAVPHPDYQPDTIDHDLLLLQLSEKATLGPAVRPLPWQR 112
Query: 509 DDTNFV-GTSAHVTGWGRL-YEGRFRRSYGH 537
            D +   GT   V GWG + + GR   S  H
Sbjct: 113 VDRDVAPGTLCDVAGWGIVNHAGRRPDSLQH 143

>pdb|1FIW|A Chain A, Three-Dimensional Structure Of Beta-Acrosin From Ram Spermatozoa Length = 290

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 391 IVGGEKATFGKWPWQISLR--QWIRSTYLHKCGAALFNENWAVTAAHCVE-DVPPSDLLL 447
           I+GG+ A  G WPW +SL+   +  +   H CG +L N  W +TAAHC       +D  L
Sbjct: 1   IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRL 60
Query: 448 RLGEHDL---STEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
             G  ++   + +      QER V+ +  H ++   +   D+AL++   PV     I P 
Sbjct: 61  IFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPG 120
Query: 505 CVPEDDTN--FVGTSAHVTGWGRLYEGRFRRS 534
           C+P+       V  +  V GWG L E   R S
Sbjct: 121 CLPQFRAGPPRVPQTCWVAGWGFLQENARRTS 152

>pdb|1FIW|A Chain A, Three-Dimensional Structure Of Beta-Acrosin From Ram Spermatozoa Length = 290

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 563 IVGGEKATFGKWPWQISLR--QWIRSTYLHKCGAALFNENWAVTAAHC 608
           I+GG+ A  G WPW +SL+   +  +   H CG +L N  W +TAAHC
Sbjct: 1   IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHC 48

>pdb|2ZPR|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 2 From Chum Salmon Length = 222

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      P Q+SL     S Y H CG +L NENW V+AAHC +    S + +RLG
Sbjct: 1   IVGGYECKAYSQPHQVSLN----SGY-HFCGGSLVNENWVVSAAHCYK----SRVAVRLG 51
Query: 451 EHDLSTEE--EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++   E  E +    R    V  HP +     + D+ L++  +P      + P+ +P 
Sbjct: 52  EHNIKVTEGSEQFISSSR----VIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPS 107
Query: 509 DDTNFVGTSAHVTGWG 524
                 GT   V+GWG
Sbjct: 108 SCAP-AGTMCTVSGWG 122

>pdb|1SGF|G Chain G, Crystal Structure Of 7s Ngf: A Complex Of Nerve Growth Factor With Four Binding Proteins (serine Proteinases) Length = 237

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 22/153 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG K      PW +++ ++ +  YL  CG  L + NW +TAAHC +D    +  + LG
Sbjct: 1   IVGGFKCEKNSQPWHVAVYRYTQ--YL--CGGVLLDPNWVLTAAHCYDD----NYKVWLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP-------RTFEY----DLALLRFYEPVKFQP 499
           +++L  +E     Q R V     HP F+        R  EY    DL LLR  +P     
Sbjct: 53  KNNLFKDEP--SAQHRFVSKAIPHPGFNMSLMRKHIRFLEYDYSNDLMLLRLSKPADITD 110
Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFR 532
            + PI +P ++   +G++   +GWG +   +F+
Sbjct: 111 TVKPITLPTEEPK-LGSTCLASGWGSITPTKFQ 142

>pdb|1SGF|G Chain G, Crystal Structure Of 7s Ngf: A Complex Of Nerve Growth Factor With Four Binding Proteins (serine Proteinases) Length = 237

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG K      PW +++ ++ +  YL  CG  L + NW +TAAHC +D
Sbjct: 1   IVGGFKCEKNSQPWHVAVYRYTQ--YL--CGGVLLDPNWVLTAAHCYDD 45

>pdb|4AN7|A Chain A, Kunitz Type Trypsin Inhibitor Complex With Porcine Trypsin Length = 231

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 386 FPSS---RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP 442
           FP+    +IVGG        P+Q+SL     ++  H CG +L N  W V+AAHC +    
Sbjct: 1   FPTDDDDKIVGGYTCAANSIPYQVSL-----NSGSHFCGGSLINSQWVVSAAHCYK---- 51
Query: 443 SDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNII 502
           S + +RLGEH++   E     Q      + +HP F+  T + D+ L++   P      + 
Sbjct: 52  SRIQVRLGEHNIDVLEG--NEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVA 109
Query: 503 PICVPEDDTNFVGTSAHVTGWG 524
            + +P       GT   ++GWG
Sbjct: 110 TVSLPR-SCAAAGTECLISGWG 130

>pdb|2ZPQ|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 1 From Chum Salmon Length = 222

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      P Q+SL     S Y H CG +L NENW V+AAHC +    S + +RLG
Sbjct: 1   IVGGYECKAYSQPHQVSLN----SGY-HFCGGSLVNENWVVSAAHCYK----SRVEVRLG 51
Query: 451 EHDLSTEE--EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++   E  E +    R    V  HP +     + D+ L++  +P      + P+ +P 
Sbjct: 52  EHNIKVTEGSEQFISSSR----VIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPS 107
Query: 509 DDTNFVGTSAHVTGWG 524
                 GT   V+GWG
Sbjct: 108 SCAP-AGTMCTVSGWG 122

>pdb|1BIT|A Chain A, The Crystal Structure Of Anionic Salmon Trypsin In A Second Crystal Form Length = 237

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           +IVGG +        Q+SL     S Y H CG +L NENW V+AAHC +    S + +RL
Sbjct: 15  KIVGGYECKAYSQAHQVSLN----SGY-HFCGGSLVNENWVVSAAHCYK----SRVEVRL 65
Query: 450 GEHDLSTEE--EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           GEH++   E  E +    R ++    HP +     + D+ L++  +P      + P+ +P
Sbjct: 66  GEHNIKVTEGSEQFISSSRVIR----HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALP 121
Query: 508 EDDTNFVGTSAHVTGWGR 525
                  GT   V+GWG 
Sbjct: 122 TSCAP-AGTMCTVSGWGN 138

>pdb|1ZZZ|A Chain A, Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes Length = 237

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           +IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RL
Sbjct: 14  KIVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRL 64
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GE +++  E    +      IV  HP ++  T   D+ L++          +  I +P  
Sbjct: 65  GEDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTS 122
Query: 510 DTNFVGTSAHVTGWGR 525
             +  GT   ++GWG 
Sbjct: 123 CAS-AGTQCLISGWGN 137

>pdb|1ZZZ|A Chain A, Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes Length = 237

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 552 LGNRILFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           LG  + FP     +IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC
Sbjct: 1   LGAAVAFPVDDDDKIVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHC 55

>pdb|1F0T|A Chain A, Bovine Trypsin Complexed With Rpr131247 Length = 243

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           +IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RL
Sbjct: 20  KIVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRL 70
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GE +++  E    +      IV  HP ++  T   D+ L++          +  I +P  
Sbjct: 71  GEDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTS 128
Query: 510 DTNFVGTSAHVTGWGR 525
             +  GT   ++GWG 
Sbjct: 129 CAS-AGTQCLISGWGN 143

>pdb|1F0T|A Chain A, Bovine Trypsin Complexed With Rpr131247 Length = 243

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 551 FLGNRILFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 607
            LG  + FP     +IVGG        P+Q+SL     S Y H CG +L N  W V+AAH
Sbjct: 6   LLGAAVAFPVDDDDKIVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAH 60
Query: 608 C 608
           C
Sbjct: 61  C 61

>pdb|1HJ8|A Chain A, 1.00 Aa Trypsin From Atlantic Salmon Length = 222

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      P Q+SL     S Y H CG +L NENW V+AAHC +    S + +RLG
Sbjct: 1   IVGGYECKAYSQPHQVSLN----SGY-HFCGGSLVNENWVVSAAHCYK----SRVEVRLG 51
Query: 451 EHDLSTEE--EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++   E  E +    R    V  HP +     + D+ L++  +P      + P+ +P 
Sbjct: 52  EHNIKVTEGSEQFISSSR----VIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT 107
Query: 509 DDTNFVGTSAHVTGWG 524
                 GT   V+GWG
Sbjct: 108 SCAP-AGTMCTVSGWG 122

>pdb|1OPH|B Chain B, Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh And S195a Trypsin Length = 243

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           +IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RL
Sbjct: 20  KIVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRL 70
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GE +++  E    +      IV  HP ++  T   D+ L++          +  I +P  
Sbjct: 71  GEDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTS 128
Query: 510 DTNFVGTSAHVTGWGR 525
             +  GT   ++GWG 
Sbjct: 129 CAS-AGTQCLISGWGN 143

>pdb|1OPH|B Chain B, Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh And S195a Trypsin Length = 243

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 551 FLGNRILFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 607
            LG  + FP     +IVGG        P+Q+SL     S Y H CG +L N  W V+AAH
Sbjct: 6   LLGAAVAFPVDDDDKIVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAH 60
Query: 608 C 608
           C
Sbjct: 61  C 61

>pdb|2XWA|A Chain A, Crystal Structure Of Complement Factor D Mutant R202a Length = 228

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+  S    ++    H CG  L  E W ++AAHC+ED     + + LG
Sbjct: 1   ILGGREAEAHARPYMAS----VQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVAS--HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            H LS + EP    +R   ++ +  HP   P T ++DL LL+  E     P + P+    
Sbjct: 57  AHSLS-QPEP---SKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQR 112
Query: 509 DDTNFV-GTSAHVTGWGRL-YEGRFRRSYGH 537
            D +   GT   V GWG + + GR   S  H
Sbjct: 113 VDRDVAPGTLCDVAGWGIVNHAGRRPDSLQH 143

>pdb|2XW9|A Chain A, Crystal Structure Of Complement Factor D Mutant S183a Length = 228

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+  S    ++    H CG  L  E W ++AAHC+ED     + + LG
Sbjct: 1   ILGGREAEAHARPYMAS----VQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVAS--HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            H LS + EP    +R   ++ +  HP   P T ++DL LL+  E     P + P+    
Sbjct: 57  AHSLS-QPEP---SKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQR 112
Query: 509 DDTNFV-GTSAHVTGWGRL-YEGRFRRSYGH 537
            D +   GT   V GWG + + GR   S  H
Sbjct: 113 VDRDVAPGTLCDVAGWGIVNHAGRRPDSLQH 143

>pdb|1DSU|A Chain A, Human Factor D, Complement Activating Enzyme Length = 228

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+  S    ++    H CG  L  E W ++AAHC+ED     + + LG
Sbjct: 1   ILGGREAEAHARPYMAS----VQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVAS--HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            H LS + EP    +R   ++ +  HP   P T ++DL LL+  E     P + P+    
Sbjct: 57  AHSLS-QPEP---SKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQR 112
Query: 509 DDTNFV-GTSAHVTGWGRL-YEGRFRRSYGH 537
            D +   GT   V GWG + + GR   S  H
Sbjct: 113 VDRDVAPGTLCDVAGWGIVNHAGRRPDSLQH 143

>pdb|2OQ5|A Chain A, Crystal Structure Of Desc1, A New Member Of The Type Ii Transmembrane Serine Proteinases Family Length = 232

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
           IVGG +   G+WPWQ SL QW  S   H+CGA L N  W V+AAHC      P+      
Sbjct: 1   IVGGTEVEEGEWPWQASL-QWDGS---HRCGATLINATWLVSAAHCFTTYKNPARWTASF 56
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           G     ++       +R ++ +  H ++   + +YD++L     PV +   +  +C+P+ 
Sbjct: 57  GVTIKPSK------MKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDA 110
Query: 510 DTNFV-GTSAHVTGWGRLYEGRFRRSY 535
              F  G    VTG+G L    + +++
Sbjct: 111 SYEFQPGDVMFVTGFGALKNDGYSQNH 137

>pdb|2OQ5|A Chain A, Crystal Structure Of Desc1, A New Member Of The Type Ii Transmembrane Serine Proteinases Family Length = 232

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 608
           IVGG +   G+WPWQ SL QW  S   H+CGA L N  W V+AAHC
Sbjct: 1   IVGGTEVEEGEWPWQASL-QWDGS---HRCGATLINATWLVSAAHC 42

>pdb|3MYW|A Chain A, The Bowman-Birk Type Inhibitor From Mung Bean In Ternary Complex With Porcine Trypsin Length = 223

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     ++  H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCAANSVPYQVSL-----NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      + +HP F+  T + D+ L++   P      +  + +P   
Sbjct: 52  EHNIDVLEG--NEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-S 108
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 109 CAAAGTECLISGWG 122

>pdb|1MCT|A Chain A, The Refined 1.6 Angstroms Resolution Crystal Structure Of The Complex Formed Between Porcine Beta-trypsin And Mcti-a, A Trypsin Inhibitor Of Squash Family Length = 223

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     ++  H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCAANSIPYQVSL-----NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      + +HP F+  T + D+ L++   P      +  + +P   
Sbjct: 52  EHNIDVLEG--NEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-S 108
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 109 CAAAGTECLISGWG 122

>pdb|1TFX|A Chain A, Complex Of The Second Kunitz Domain Of Tissue Factor Pathway Inhibitor With Porcine Trypsin Length = 223

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     ++  H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCAANSIPYQVSL-----NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      + +HP F+  T + D+ L++   P      +  + +P   
Sbjct: 52  EHNIDVLEG--NEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-S 108
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 109 CAAAGTECLISGWG 122

>pdb|1AN1|E Chain E, Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Length = 223

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     ++  H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCAANSIPYQVSL-----NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      + +HP F+  T + D+ L++   P      +  + +P   
Sbjct: 52  EHNIDVLEG--NEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLXSRVATVSLPR-S 108
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 109 CAAAGTECLISGWG 122

>pdb|2ZPS|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 3 From Chum Salmon Length = 222

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      P Q+SL     S Y H CG +L NENW V+AAHC +    + + +RLG
Sbjct: 1   IVGGYECKAYSQPHQVSLN----SGY-HFCGGSLVNENWVVSAAHCYK----TRVEVRLG 51
Query: 451 EHDLSTEE--EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++   E  E +    R    V  HP +     + D+ L++  +P      + P+ +P 
Sbjct: 52  EHNIKVTEGSEQFISSSR----VIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPS 107
Query: 509 DDTNFVGTSAHVTGWG 524
                 GT   V+GWG
Sbjct: 108 SCAP-AGTMCTVSGWG 122

>pdb|1BZX|E Chain E, The Crystal Structure Of Anionic Salmon Trypsin In Complex With Bovine Pancreatic Trypsin Inhibitor Length = 222

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      P Q+SL     S Y H CG +L NENW V+AAHC +    S + +RLG
Sbjct: 1   IVGGYECKPYSQPHQVSLN----SGY-HFCGGSLVNENWVVSAAHCYK----SRVEVRLG 51
Query: 451 EHDLSTEE--EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++   E  E +    R    V  HP +     + D+ L++  +P      + P+ +P 
Sbjct: 52  EHNIKVTEGSEQFISSSR----VIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT 107
Query: 509 DDTNFVGTSAHVTGWG 524
                 GT   V+GWG
Sbjct: 108 SCAP-AGTMCTVSGWG 122

>pdb|1TRN|A Chain A, Crystal Structure Of Human Trypsin 1: Unexpected Phosphorylation Of Tyrosine 151 Length = 224

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L NE W V+A HC +    S + +RLG
Sbjct: 1   IVGGYNCEENSVPYQVSLN----SGY-HFCGGSLINEQWVVSAGHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      +  HPQ+D +T   D+ L++          +  I +P   
Sbjct: 52  EHNIEVLEG--NEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINARVSTISLPTAP 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 P-ATGTKCLISGWG 122

>pdb|1ELV|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Complement C1s Protease Length = 333

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 368 ESQGINMSNYKEVCGRRLFP---SSRIVGGEKATFGKWPWQISLRQ-WIRSTYLHKCGAA 423
           E  G  +     VCG    P     RI+GG  A    +PWQ+     W         G A
Sbjct: 57  EVLGPELPKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDNPW--------AGGA 108
Query: 424 LFNENWAVTAAHCVEDVPPSDLLL--------RLGEHDLSTEEEPYGYQERRVQIVASHP 475
           L NE W +TAAH VE      + +        RL +  + T E  + +   ++  V    
Sbjct: 109 LINEYWVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEG- 167
Query: 476 QFDPRT-FEYDLALLRFYEPVKFQPNIIPICVP--EDDTNFV-GTSAHVTGWGR 525
               RT F+ D+AL+R  +PVK  P + PIC+P    D N + G    ++GWGR
Sbjct: 168 ----RTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGR 217

>pdb|1PYT|C Chain C, Ternary Complex Of Procarboxypeptidase A, Proproteinase E, And Chymotrypsinogen C Length = 253

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 387 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLL 446
           PSSR+V GE A    W WQ+SL+      + H CG +L   +W VTA HC+       ++
Sbjct: 8   PSSRVVNGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTSRTYQVV 67
Query: 447 LRLGEHDLSTEEEPYGYQERRVQIVAS----HPQFDPRTFE--YDLALLRFYEPVKFQPN 500
             LGE+D S  +      E+ + I A     HP ++        D+AL++     +    
Sbjct: 68  --LGEYDRSVLQG----SEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDK 121
Query: 501 I-IPICVPEDDTNFVGTSAHVTGWGRLYEG 529
           + +    P  D        +++GWGRLY G
Sbjct: 122 VQLANLPPAGDILPNEAPCYISGWGRLYTG 151

>pdb|1PYT|C Chain C, Ternary Complex Of Procarboxypeptidase A, Proproteinase E, And Chymotrypsinogen C Length = 253

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           PSSR+V GE A    W WQ+SL+      + H CG +L   +W VTA HC+ 
Sbjct: 8   PSSRVVNGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS 59

>pdb|2A31|A Chain A, Trypsin In Complex With Borate Length = 223

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 392 VGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGE 451
           VGG        P+Q+SL     ++  H CG +L N  W V+AAHC +    S + +RLGE
Sbjct: 2   VGGYTCAANSIPYQVSL-----NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLGE 52
Query: 452 HDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT 511
           H++   E     Q      + +HP F+  T + D+ L++   P      +  + +P    
Sbjct: 53  HNIDVLEG--NEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPR-SC 109
Query: 512 NFVGTSAHVTGWG 524
              GT   ++GWG
Sbjct: 110 AAAGTECLISGWG 122

>pdb|2RA3|A Chain A, Human Cationic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (bpti) Length = 224

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L NE W V+A HC +    S + +RLG
Sbjct: 1   IVGGYNCEENSVPYQVSLN----SGY-HFCGGSLINEQWVVSAGHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      +  HPQ+D +T   D+ L++         ++  I +P   
Sbjct: 52  EHNIEVLEG--NEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINAHVSTISLPTAP 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 PA-TGTKCLISGWG 122

>pdb|4D9Q|A Chain A, Inhibiting Alternative Pathway Complement Activation By Targeting The Exosite On Factor D Length = 228

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+  S    ++    H CG  L  E W ++AAHC+ED     + + LG
Sbjct: 1   ILGGREAEAHARPYMAS----VQVNGEHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVAS--HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            H LS + EP    +R   ++ +  HP   P T ++DL LL+  E     P + P+    
Sbjct: 57  AHSLS-QPEP---SKRLYDVLRAVPHPDSRPDTIDHDLLLLQLSEKATLGPAVRPLPWQR 112
Query: 509 DDTNF-VGTSAHVTGWG 524
            D +   GT   V GWG
Sbjct: 113 VDRDVEPGTLCDVAGWG 129

>pdb|1L2E|A Chain A, Human Kallikrein 6 (Hk6) Active Form With Benzamidine Inhibitor Length = 223

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 420 CGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP 479
           CG  L +  W +TAAHC +     +L + LG+H+L   E     ++  V     HP +D 
Sbjct: 26  CGGVLIHPLWVLTAAHCKK----PNLQVFLGKHNLRQRES--SQEQSSVVRAVIHPDYDA 79
Query: 480 RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRF----RRSY 535
            + + D+ LLR   P K    I P+ + E D +   TS H+ GWG+  +G F    + +Y
Sbjct: 80  ASHDQDIMLLRLARPAKLSELIQPLPL-ERDCSANTTSCHILGWGKTADGDFPDTIQCAY 138
Query: 536 GHPATRQE 543
            H  +R+E
Sbjct: 139 IHLVSREE 146

>pdb|2OLG|A Chain A, Crystal Structure Of The Serine Protease Domain Of Prophenoloxidase Activating Factor-I In A Zymogen Form Length = 278

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 381 CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLH-KCGAALFNENWAVTAAHCVED 439
           CG ++  + +I+ G+     ++PW   +     S +    CG +L N  + VTAAHCV  
Sbjct: 14  CGYQV-EADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAG 72
Query: 440 ----VPPSDLLLRLGEHDLSTEEEPYGYQ---------ERRVQIVASHPQF--DPRTFEY 484
               V  +   +RLGE + +T+ + YG           +  ++    HP +    +   +
Sbjct: 73  RVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYH 132
Query: 485 DLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRF---RRSYGHPAT 540
           D+AL+R    V+F   I P+C+P+ +    VG    V GWGR   G++   ++    P  
Sbjct: 133 DIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVV 192
Query: 541 RQEMATCWNHFLGNRILFPSSRI-VGGEKA 569
             E   C   F    +   SS++  GGEKA
Sbjct: 193 HAEQ--CAKTFGAAGVRVRSSQLCAGGEKA 220

>pdb|1M9U|A Chain A, Crystal Structure Of Earthworm Fibrinolytic Enzyme Component A From Eisenia Fetida Length = 241

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++GG  A+ G++PWQ+S +Q    ++ H CGA+L +   A++A+HCV+ V P+++ +  G
Sbjct: 1   VIGGTNASPGEFPWQLS-QQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAG 59
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALLRFYEPVKFQPNIIPICVPE 508
              L  + +  G Q   V     H  +   T  Y  D+A+L     +    NI    +P 
Sbjct: 60  ---LWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPA 116
Query: 509 DDTN-FVGTSAHVTGWGR 525
           ++ N + GT+  ++GWGR
Sbjct: 117 NNNNDYAGTTCVISGWGR 134

>pdb|1MBQ|A Chain A, Anionic Trypsin From Pacific Chum Salmon Length = 220

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      P Q+SL     S Y H CG +L NENW V+AAHC +    S + +RLG
Sbjct: 1   IVGGYECKAYSQPHQVSLN----SGY-HFCGGSLVNENWVVSAAHCYK----SRVEVRLG 51
Query: 451 EHDLSTEE--EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++   E  E +    R    V  HP +     + D+ L++  +       + P+ +P 
Sbjct: 52  EHNIKVTEGSEQFISSSR----VIRHPNYSSYNIDNDIMLIKLSKSATLNTYVQPVALPS 107
Query: 509 DDTNFVGTSAHVTGWG 524
                 GT   V+GWG
Sbjct: 108 SCAP-AGTMCTVSGWG 122

>pdb|2TBS|A Chain A, Cold-Adaption Of Enzymes: Structural Comparison Between Salmon And Bovine Trypsins Length = 222

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +        Q+SL     S Y H CG +L NENW V+AAHC +    S + +RLG
Sbjct: 1   IVGGYECKAYSQAHQVSLN----SGY-HFCGGSLVNENWVVSAAHCYK----SRVEVRLG 51
Query: 451 EHDLSTEE--EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++   E  E +    R    V  HP +     + D+ L++  +P      + P+ +P 
Sbjct: 52  EHNIKVTEGSEQFISSSR----VIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT 107
Query: 509 DDTNFVGTSAHVTGWG 524
                 GT   V+GWG
Sbjct: 108 SCAP-AGTMCTVSGWG 122

>pdb|3S9A|A Chain A, Russell's Viper Venom Serine Proteinase, Rvv-V (Closed-Form) Length = 234

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG++    + P+ ++L     ST    C  AL N  W +TAAHC       ++ ++LG
Sbjct: 1   VVGGDECNINEHPFLVALYTSASSTI--HCAGALINREWVLTAAHCDR----RNIRIKLG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H  +   E    +  R +    + +F P   + D+ L+R   PV +  +I P+ +P   
Sbjct: 55  MHSKNIRNEDEQIRVPRGKYFCLNTKF-PNGLDKDIMLIRLRRPVTYSTHIAPVSLPS-R 112
Query: 511 TNFVGTSAHVTGWGRL 526
           +  VG+   + GWG++
Sbjct: 113 SRGVGSRCRIMGWGKI 128

>pdb|4DG4|A Chain A, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 224

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L +E W V+AAHC +    + + +RLG
Sbjct: 1   IVGGYTCEENSLPYQVSLN----SGY-HFCGGSLISEQWVVSAAHCYK----TRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      +  HP+++  T + D+ L++   P      +  I +P   
Sbjct: 52  EHNIKVLEG--NEQFINAAKIIRHPKYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAP 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 P-AAGTECLISGWG 122

>pdb|2R9P|A Chain A, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin Inhibitor(Bpti) Length = 224

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     ++  H CG +L +E W V+AAHC +    + + +RLG
Sbjct: 1   IVGGYTCEENSLPYQVSL-----NSGSHFCGGSLISEQWVVSAAHCYK----TRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      +  HP+++  T + D+ L++   P      +  I +P   
Sbjct: 52  EHNIKVLEG--NEQFINAAKIIRHPKYNRDTLDNDIMLIKLSSPAVINARVSTISLPTAP 109
Query: 511 TNFVGTSAHVTGWG 524
               GT   ++GWG
Sbjct: 110 P-AAGTECLISGWG 122

>pdb|1H4W|A Chain A, Structure Of Human Trypsin Iv (Brain Trypsin) Length = 224

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     ++  H CG +L +E W V+AAHC +    + + +RLG
Sbjct: 1   IVGGYTCEENSLPYQVSL-----NSGSHFCGGSLISEQWVVSAAHCYK----TRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQE--RRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++   E   G ++    V+I+  HP+++  T + D+ L++   P      +  I +P 
Sbjct: 52  EHNIKVLE---GNEQFINAVKII-RHPKYNRDTLDNDIMLIKLSSPAVINARVSTISLPT 107
Query: 509 DDTNFVGTSAHVTGWG 524
                 GT   ++GWG
Sbjct: 108 APP-AAGTECLISGWG 122

>pdb|1HYL|A Chain A, The 1.8 A Structure Of Collagenase From Hypoderma Lineatum Length = 230

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G +A  G +P+Q  L   ++      CG +L +  W +TAAHCV D     +++ LG
Sbjct: 1   IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDA--VSVVVYLG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP--- 507
              +  E E     ER    + SH  F+P T+  D+AL++    V++  NI PI +P   
Sbjct: 59  SA-VQYEGEAVVNSER----IISHSMFNPDTYLNDVALIKI-PHVEYTDNIQPIRLPSGE 112
Query: 508 EDDTNFVGTSAHVTGWGR 525
           E +  F    A V+GWG+
Sbjct: 113 ELNNKFENIWATVSGWGQ 130

>pdb|3PLK|A Chain A, Bovine Trypsin Variant X(Tripleile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLLNSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1A0J|A Chain A, Crystal Structure Of A Non-Psychrophilic Trypsin From A Cold-Adapted Fish Species. Length = 223

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +       +Q SL+    S Y H CG +L +  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYECRKNSASYQASLQ----SGY-HFCGGSLISSTWVVSAAHCYK----SRIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E    + +  V+++  HP ++ R  + D+ L++  +P      +  + +P   
Sbjct: 52  EHNIAVNEGTEQFID-SVKVIM-HPSYNSRNLDNDIMLIKLSKPASLNSYVSTVALPSSC 109
Query: 511 TNFVGTSAHVTGWGRL 526
            +  GT   V+GWG L
Sbjct: 110 AS-SGTRCLVSGWGNL 124

>pdb|4B1T|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala ( Ta) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|4B2A|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tga) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1V2N|T Chain T, Potent Factor Xa Inhibitor In Complex With Bovine Trypsin Variant X(99175190)BT Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|4B2C|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tpa) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|3PMJ|A Chain A, Bovine Trypsin Variant X(Tripleile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|3UNS|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|3UWI|A Chain A, Bovine Trypsin Variant X(Tripleglu217phe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|3UNQ|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1V2K|T Chain T, Factor Xa Specific Inhibitor In Complex With Bovine Trypsin Variant X(Triple.Glu)bt.D2 Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|4B2B|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tgpa) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|3PWB|A Chain A, Bovine Trypsin Variant X(Tripleglu217ile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|3UQV|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|4F4O|C Chain C, Structure Of The Haptoglobin-Haemoglobin Complex Length = 347

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 30/198 (15%)
Query: 371 GINMSNYKEVCGRRLFPSS---RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNE 427
           G  +   + VCG+   P     RI+GG     G +PWQ  +     S +    GA L NE
Sbjct: 80  GEKLPECEAVCGKPKNPVDQVQRIMGGSLDAKGSFPWQAKMI----SHHNLTSGATLINE 135
Query: 428 NWAVTAAHCVEDVPPSDLLLRLGEH------DLSTEEEPYGYQERRVQIVASHPQFDPRT 481
            W +T A            LRLG        D++     Y  +++ V+I      F P  
Sbjct: 136 QWLLTTAKN----------LRLGHKNDTKAKDIAPTLRLYVGKKQEVEI--EKVIFHPDN 183
Query: 482 FEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGH---P 538
              D+ L++  + V     ++PIC+P  D   VG   +V+GWGR     F     +   P
Sbjct: 184 STVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLP 243
Query: 539 ATRQEMATCWNHFLGNRI 556
              QE   C  ++ G+ +
Sbjct: 244 VADQE--KCVQYYEGSTV 259

>pdb|1TGS|Z Chain Z, Three-Dimensional Structure Of The Complex Between Pancreatic Secretory Inhibitor (Kazal Type) And Trypsinogen At 1.8 Angstroms Resolution. Structure Solution, Crystallographic Refinement And Preliminary Structural Interpretation Length = 229

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           +IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RL
Sbjct: 6   KIVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRL 56
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GE +++  E    +      IV  HP ++  T   D+ L++          +  I +P  
Sbjct: 57  GEDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTS 114
Query: 510 DTNFVGTSAHVTGWG 524
             +  GT   ++GWG
Sbjct: 115 CAS-AGTQCLISGWG 128

>pdb|3V0X|A Chain A, Bovine Trypsin Variant X(Tripleglu217phe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLXSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1Y59|T Chain T, Dianhydrosugar-Based Benzamidine, Factor Xa Specific Inhibitor In Complex With Bovine Trypsin Mutant Length = 223

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T+  D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1G3B|A Chain A, Bovine Beta-Trypsin Bound To Meta-Amidino Schiff Base Magnesium(Ii) Chelate Length = 228

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           +IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RL
Sbjct: 5   KIVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRL 55
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GE +++  E    +      IV  HP ++  T   D+ L++          +  I +P  
Sbjct: 56  GEDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTS 113
Query: 510 DTNFVGTSAHVTGWG 524
             +  GT   ++GWG
Sbjct: 114 CAS-AGTQCLISGWG 127

>pdb|1V2U|T Chain T, Benzamidine In Complex With Bovine Trypsin Varinat X(Ssai) Bt.D1 Length = 223

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1V2O|T Chain T, Trypsin Inhibitor In Complex With Bovine Trypsin Variant X(Ssyi)bt.B4 Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1V2S|T Chain T, Benzamidine In Complex With Bovine Trypsin Variant X(Ssfi.Glu)bt.D1 Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1V2J|T Chain T, Benzamidine In Complex With Bovine Trypsin Variant X(Ssri) Bt.C1 Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|2D8W|A Chain A, Structure Of Hyper-Vil-Trypsin Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCXK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|5PTP|A Chain A, Structure Of Hydrolase (Serine Proteinase) Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1HJ9|A Chain A, Atomic Resolution Structures Of Trypsin Provide Insight Into Structural Radiation Damage Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1TAB|E Chain E, Structure Of The Trypsin-Binding Domain Of Bowman-Birk Type Protease Inhibitor And Its Interaction With Trypsin Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1V2Q|T Chain T, Trypsin Inhibitor In Complex With Bovine Trypsin Variant X(Sswi)bt.B4 Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1TAW|A Chain A, Bovine Trypsin Complexed To Appi Length = 223

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|2TLD|E Chain E, Crystal Structure Of An Engineered Subtilisin Inhibitor Complexed With Bovine Trypsin Length = 220

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|2FI4|E Chain E, Crystal Structure Of A Bpti Variant (Cys14->ser) In Complex With Trypsin Length = 223

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLXSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1AZZ|A Chain A, Fiddler Crab Collagenase Complexed To Ecotin Length = 226

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP Q +L  +I   Y   CG +L +  W +TAAHC++     D++  LG
Sbjct: 1   IVGGVEAVPNSWPHQAAL--FIDDMYF--CGGSLISPEWILTAAHCMDGAGFVDVV--LG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVAS----HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
            H++  +E        +V I ++    H  ++      D+A++R   PV     I  + +
Sbjct: 55  AHNIREDEAT------QVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGL 108
Query: 507 PEDDTNFVGTSAHVTGWG 524
           P  D   VGT    TGWG
Sbjct: 109 PSTDVG-VGTVVTPTGWG 125

>pdb|3VEQ|B Chain B, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A Engineered Mutant Trypsin Inhibitor Length = 223

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  + +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASVSLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1YBW|A Chain A, Protease Domain Of Hgfa With No Inhibitor Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 378 KEVCGRR----LFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTA 433
           ++ CGRR     F   RI+GG  +  G  PW  ++  +I  ++   C  +L +  W V+A
Sbjct: 19  RQACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAI--YIGDSF---CAGSLVHTCWVVSA 73
Query: 434 AHCVEDVPPSD-LLLRLGEHDLS-TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRF 491
           AHC    PP D + + LG+H  + T +    +   +      +  F+P   ++DL L+R 
Sbjct: 74  AHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPS--DHDLVLIRL 131
Query: 492 YEP----VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYE 528
            +           + PIC+PE  + F  G    + GWG L E
Sbjct: 132 KKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDE 173

>pdb|4D8N|A Chain A, Human Kallikrein 6 Inhibitors With A Para-Amidobenzylanmine P1 Group Carry A High Binding Efficiency Length = 223

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 420 CGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP 479
           CG  L +  W +TAAHC +     +L + LG+H+L  +E           ++  HP +D 
Sbjct: 26  CGGVLIHPLWVLTAAHCKK----PNLQVFLGKHNLGQQESSQEQSSVVRAVI--HPDYDA 79
Query: 480 RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRF----RRSY 535
            + + D+ LLR   P K    I P+ + E D +   TS H+ GWG+  +G F    + +Y
Sbjct: 80  ASHDQDIMLLRLARPAKLSELIQPLPL-ERDCSAQTTSCHILGWGKTADGDFPDTIQCAY 138
Query: 536 GHPATRQE 543
            H  +R+E
Sbjct: 139 IHLVSREE 146

>pdb|1GVL|A Chain A, Human Prokallikrein 6 (Hk6) PROZYME PROPROTEASE M Proneurosin Length = 223

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 420 CGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP 479
           CG  L +  W +TAAHC +     +L + LG+H+L  +E           ++  HP +D 
Sbjct: 27  CGGVLIHPLWVLTAAHCKK----PNLQVFLGKHNLRQQESSQEQSSVVRAVI--HPDYDA 80
Query: 480 RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRF----RRSY 535
            + + D+ LLR   P K    I P+ + E D +   TS H+ GWG+  +G F    + +Y
Sbjct: 81  ASHDQDIMLLRLARPAKLSELIQPLPL-ERDCSAQTTSCHILGWGKTADGDFPDTIQCAY 139
Query: 536 GHPATRQE 543
            H  +R+E
Sbjct: 140 IHLVSREE 147

>pdb|3QK1|A Chain A, Crystal Structure Of Enterokinase-Like Trypsin Variant Length = 229

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++ R    D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNKRRKNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   ++GWG
Sbjct: 110 AS-AGTQCLISGWG 122

>pdb|1NTP|A Chain A, Use Of The Neutron Diffraction HD EXCHANGE TECHNIQUE TO Determine The Conformational Dynamics Of Trypsin Length = 223

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 392 VGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGE 451
           VGG        P+Q+SL     S Y H CG +L +  W V+AAHC +    S + +RLGE
Sbjct: 2   VGGYTCGANTVPYQVSLN----SGY-HFCGGSLIDSQWVVSAAHCYK----SGIQVRLGE 52
Query: 452 HDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT 511
            +++  E    +      IV  HP +D  T   D+ L++          +  I +P    
Sbjct: 53  DNINVVEGNEQFISASKSIV--HPSYDSNTLNNDIMLIKLKSAASLDSRVASISLPTSCA 110
Query: 512 NFVGTSAHVTGWG 524
           +  GT   ++GWG
Sbjct: 111 S-AGTQCLISGWG 122

>pdb|3OTJ|E Chain E, A Crystal Structure Of Trypsin Complexed With Bpti (Bovine Pancreatic Trypsin Inhibitor) By X-RayNEUTRON JOINT REFINEMENT Length = 223

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 392 VGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGE 451
           VGG        P+Q+SL     S Y H CG +L N  W V+AAHC +    S + +RLGE
Sbjct: 2   VGGYTCGANTVPYQVSLN----SGY-HFCGGSLINSQWVVSAAHCYK----SGIQVRLGE 52
Query: 452 HDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT 511
            +++  E    +      IV  HP ++  T   D+ L++          +  I +P    
Sbjct: 53  DNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCA 110
Query: 512 NFVGTSAHVTGWG 524
           +  GT   ++GWG
Sbjct: 111 S-AGTQCLISGWG 122

>pdb|2VNT|A Chain A, Urokinase-Type Plasminogen Activator Inhibitor Complex With A 1-(7-Sulphoamidoisoquinolinyl)guanidine Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 381 CGRR-LFPSSRIVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVE 438
           CG++ L P  +I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  
Sbjct: 13  CGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFI 72
Query: 439 DVPPS-DLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYE 493
           D P   D ++ LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E
Sbjct: 73  DYPKKEDYIVYLGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 130
Query: 494 PVKFQPN--IIPICVPE--DDTNFVGTSAHVTGWGR 525
               QP+  I  IC+P   +D  F GTS  +TG+G+
Sbjct: 131 GRCAQPSRTIQTICLPSMYNDPQF-GTSCEITGFGK 165

>pdb|2ZGC|A Chain A, Crystal Structure Of Active Human Granzyme M Length = 240

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      P+  SL++       H CG  L +  W +TAAHC+     + L L LG
Sbjct: 1   IIGGREVIPHSRPYMASLQR----NGSHLCGGVLVHPKWVLTAAHCLAQR-MAQLRLVLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP-RTFEYDLALLRFYEPVKFQPNIIPICVP-E 508
            H L +    +      ++    HP++ P    E DLALL+    VK    I P+ +P +
Sbjct: 56  LHTLDSPGLTF-----HIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSK 110
Query: 509 DDTNFVGTSAHVTGWGRLYEG 529
                 GT   + GWG  ++G
Sbjct: 111 RQVVAAGTRCSMAGWGLTHQG 131

>pdb|1AO5|A Chain A, Mouse Glandular Kallikrein-13 (Prorenin Converting Enzyme) Length = 237

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG        PWQ++    +     H CG  L + NW +TAAHC  D       + LG
Sbjct: 1   VVGGFNCEKNSQPWQVA----VYYQKEHICGGVLLDRNWVLTAAHCYVD----QYEVWLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRT-----------FEYDLALLRFYEPVKFQP 499
           ++ L  EE     Q R V     HP F+              F  DL LLR  +P     
Sbjct: 53  KNKLFQEEP--SAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITD 110
Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRR 533
            + PI +P  +    G+    +GWG +   R+++
Sbjct: 111 VVKPIALPTKEPK-PGSKCLASGWGSITPTRWQK 143

>pdb|1FQ3|A Chain A, Crystal Structure Of Human Granzyme B Length = 227

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+   L  W + + L +CG  L  +++ +TAAHC      S + + LG
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKS-LKRCGGFLIQDDFVLTAAHCWG----SSINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++  E+EP   Q   V+    HP ++P+ F  D+ LL+     K    + P+ +P + 
Sbjct: 56  AHNIK-EQEPT-QQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNK 113
Query: 511 TNFV-GTSAHVTGWGR 525
                G +  V GWG+
Sbjct: 114 AQVKPGQTCSVAGWGQ 129

>pdb|1OP8|A Chain A, Crystal Structure Of Human Granzyme A Length = 234

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG + T    P+ + L    R T    C  AL  ++W +TAAHC  +     +   LG
Sbjct: 1   IIGGNEVTPHSRPYMV-LLSLDRKTI---CAGALIAKDWVLTAAHCNLNKRSQVI---LG 53
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED- 509
            H + T EEP   Q   V+    +P +DP T E DL LL+  E  K    +  + +P+  
Sbjct: 54  AHSI-TREEPT-KQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKG 111
Query: 510 DTNFVGTSAHVTGWGRLY 527
           D    GT   V GWGR +
Sbjct: 112 DDVKPGTMCQVAGWGRTH 129

>pdb|1IAU|A Chain A, Human Granzyme B In Complex With Ac-Iepd-Cho Length = 227

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+   L  W + + L +CG  L  +++ +TAAHC      S + + LG
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKS-LKRCGGFLIRDDFVLTAAHCWG----SSINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++  E+EP   Q   V+    HP ++P+ F  D+ LL+     K    + P+ +P + 
Sbjct: 56  AHNIK-EQEPT-QQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNK 113
Query: 511 TNFV-GTSAHVTGWGR 525
                G +  V GWG+
Sbjct: 114 AQVKPGQTCSVAGWGQ 129

>pdb|1ORF|A Chain A, The Oligomeric Structure Of Human Granzyme A Reveals The Molecular Determinants Of Substrate Specificity Length = 234

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG + T    P+ + L    R T    C  AL  ++W +TAAHC  +     +   LG
Sbjct: 1   IIGGNEVTPHSRPYMV-LLSLDRKTI---CAGALIAKDWVLTAAHCNLNKRSQVI---LG 53
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED- 509
            H + T EEP   Q   V+    +P +DP T E DL LL+  E  K    +  + +P+  
Sbjct: 54  AHSI-TREEPT-KQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKG 111
Query: 510 DTNFVGTSAHVTGWGRLY 527
           D    GT   V GWGR +
Sbjct: 112 DDVKPGTMCQVAGWGRTH 129

>pdb|1GVZ|A Chain A, Prostate Specific Antigen (Psa) From Stallion Seminal Plasma Length = 237

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 22/147 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      PWQ++    +      +CG  L +  W +TAAHC+ D    D  + LG
Sbjct: 1   IIGGWECEKHSKPWQVA----VYHQGHFQCGGVLVHPQWVLTAAHCMSD----DYQIWLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFE-----------YDLALLRFYEPVKFQP 499
            H+LS +E+   + +     +   PQFD    +           +DL LLR  +P +   
Sbjct: 53  RHNLSKDEDTAQFHQVSDSFL--DPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITD 110
Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRL 526
            +  + +P  +   +G++ + +GWG +
Sbjct: 111 AVKILDLPTQEPK-LGSTCYTSGWGLI 136

>pdb|1SPJ|A Chain A, Structure Of Mature Human Tissue Kallikrein (Human Kallikrein 1 Or Klk1) At 1.70 Angstrom Resolution With Vacant Active Site Length = 238

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      PWQ +L  +  ST+  +CG  L +  W +TAAHC+ D    +  L LG
Sbjct: 1   IVGGWECEQHSQPWQAALYHF--STF--QCGGILVHRQWVLTAAHCISD----NYQLWLG 52
Query: 451 EHDLSTEE---------EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNI 501
            H+L  +E         E + +    + ++ +H +     + +DL LLR  EP     + 
Sbjct: 53  RHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDA 112
Query: 502 IPICVPEDDTNFVGTSAHVTGWGRLYEGRF 531
           + +     +   VG++   +GWG +    F
Sbjct: 113 VKVVELPTEEPEVGSTCLASGWGSIEPENF 142

>pdb|2ZGJ|A Chain A, Crystal Structure Of D86n-gzmm Complexed With Its Optimal Synthesized Substrate Length = 240

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      P+  SL++       H CG  L +  W +TAAHC+     + L L LG
Sbjct: 1   IIGGREVIPHSRPYMASLQR----NGSHLCGGVLVHPKWVLTAAHCLAQR-MAQLRLVLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP-RTFEYDLALLRFYEPVKFQPNIIPICVP-E 508
            H L +    +      ++    HP++ P    E +LALL+    VK    I P+ +P +
Sbjct: 56  LHTLDSPGLTF-----HIKAAIQHPRYKPVPALENNLALLQLDGKVKPSRTIRPLALPSK 110
Query: 509 DDTNFVGTSAHVTGWGRLYEG 529
                 GT   + GWG  ++G
Sbjct: 111 RQVVAAGTRCSMAGWGLTHQG 131

>pdb|1Q3X|A Chain A, Crystal Structure Of The Catalytic Region Of Human Masp-2 Length = 328

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 380 VCGRRLFPSS-RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV- 437
           VCG     +  RI GG+KA  G +PWQ+ +     +        AL  +NW +TAAH V 
Sbjct: 75  VCGLSARTTGGRIYGGQKAKPGDFPWQVLILGGTTAA------GALLYDNWVLTAAHAVY 128
Query: 438 -EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD-PRTFEYDLALLRFYEPV 495
            +    S L +R+G     +      Y +   + V  H  +     F+ D+AL++    V
Sbjct: 129 EQKHDASALDIRMGTLKRLSPH----YTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKV 184
Query: 496 KFQPNIIPICVPEDD------TNFVGTSAHVTGWGRLYEGRFRRS 534
               NI PIC+P  +      T+ +GT+   +GWG    G   R+
Sbjct: 185 VINSNITPICLPRKEAESFMRTDDIGTA---SGWGLTQRGFLARN 226

>pdb|1SGF|A Chain A, Crystal Structure Of 7s Ngf: A Complex Of Nerve Growth Factor With Four Binding Proteins (serine Proteinases) Length = 240

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 22/141 (15%)
Query: 403 PWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYG 462
           PW +++ ++ +    ++CG  L + NW +TAAHC  D       + LG+++   E+EP  
Sbjct: 16  PWHVAVYRFNK----YQCGGVLLDRNWVLTAAHCYND----KYQVWLGKNNF-LEDEPSD 66
Query: 463 YQERRVQIVASHPQFD--------PR---TFEYDLALLRFYEPVKFQPNIIPICVPEDDT 511
            Q R V     HP F+        P+    +  DL LLR  +P      + PI +P ++ 
Sbjct: 67  -QHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEP 125
Query: 512 NFVGTSAHVTGWGRLYEGRFR 532
              G++   +GWG     +F+
Sbjct: 126 KL-GSTCLASGWGSTTPIKFK 145

>pdb|2BDG|A Chain A, Human Kallikrein 4 Complex With Nickel And P-aminobenzamidine Length = 223

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ GE  +    PWQ +L   +    L  C   L +  W ++AAHC ++       + LG
Sbjct: 1   IINGEDCSPHSQPWQAAL---VMENELF-CSGVLVHPQWVLSAAHCFQN----SYTIGLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H L  ++EP G Q     +   HP+++      DL L++  E V     I  I +    
Sbjct: 53  LHSLEADQEP-GSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIASQC 111
Query: 511 TNFVGTSAHVTGWGRLYEGR 530
               G S  V+GWG L  GR
Sbjct: 112 PT-AGNSCLVSGWGLLANGR 130

>pdb|1FI8|A Chain A, Rat Granzyme B [n66q] Complexed To Ecotin [81-84 Iepd] Length = 228

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+   L+     +   KCG  L  E++ +TAAHC      S + + LG
Sbjct: 1   IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC----SGSKIQVTLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++  +E+    Q   V  +  HP ++ +T   D+ LL+     K    + P+ +P  +
Sbjct: 57  AHNIKEQEKM--QQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRN 114
Query: 511 TNFV-GTSAHVTGWGRL 526
                G   +V GWG+L
Sbjct: 115 VKVKPGDVCYVAGWGKL 131

>pdb|1BDA|A Chain A, Catalytic Domain Of Human Single Chain Tissue Plasminogen Activator In Complex With Dansyl-Egr-Cmk (Dansyl-Glu-Gly-Arg Chloromethyl Ketone) Length = 265

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 380 VCGRRLF--PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHK--CGAALFNENWAVTAAH 435
            CG R +  P  RI GG  A     PWQ ++    R +   +  CG  L +  W ++AAH
Sbjct: 1   TCGLRQYSQPQFRIKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAH 60
Query: 436 CVED-VPPSDLLLRLGE--HDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFY 492
           C ++  PP  L + LG     +  EEE    Q+  V+    H +FD  T++ D+ALL+  
Sbjct: 61  CFQERFPPHHLTVILGRTYRVVPGEEE----QKFEVEKYIVHKEFDDDTYDNDIALLQLK 116
Query: 493 EP----VKFQPNIIPICVPEDDTNFVG-TSAHVTGWGR------LYEGRFRRSYG--HPA 539
                  +    +  +C+P  D      T   ++G+G+       Y  R + ++   +P+
Sbjct: 117 SDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPS 176
Query: 540 TRQEMATCWNHFLGNRILFPSSRIVGGEKATF 571
           +R       N  + + +L       GG +A  
Sbjct: 177 SRCTSQHLLNRTVTDNMLCAGDTRSGGPQANL 208

>pdb|2EEK|A Chain A, Crystal Structure Of Atlantic Cod Trypsin Complexed With Benzamidine Length = 220

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG + T      Q+SL     S Y H CG +L +++W V+AAHC + V    L +RLG
Sbjct: 1   IVGGYECTKHSQAHQVSLN----SGY-HFCGGSLVSKDWVVSAAHCYKSV----LRVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH +   E    Y       V  HP +       D+ L++  +P      +  + +P  +
Sbjct: 52  EHHIRVNEGTEQYISSSS--VIRHPNYSSYNINNDIMLIKLTKPATLNQYVHAVALPT-E 108
Query: 511 TNFVGTSAHVTGWG 524
                T   V+GWG
Sbjct: 109 CAADATMCTVSGWG 122

>pdb|1FY1|A Chain A, [r23s,F25e]hbp, A Mutant Of Human Heparin Binding Protein (Cap37) Length = 225

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG KA   ++P+  S    I++   H+CG AL +  + +TAA C +   P    + LG
Sbjct: 1   IVGGRKARPRQFPFLAS----IQNQGSHECGGALIHARFVMTAASCFQSQNPGVSTVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQ--FDPRTFEYDLALLRFYEPVKFQPNIIPICVP- 507
            +DL   E     Q R+   ++S  +  +DP+    DL LL+         ++  + +P 
Sbjct: 57  AYDLRRRER----QSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPL 112
Query: 508 EDDTNFVGTSAHVTGWGRLYEG 529
           ++ T   GT   V GWG    G
Sbjct: 113 QNATVEAGTRCQVAGWGSQRSG 134

>pdb|1FUJ|A Chain A, Pr3 (Myeloblastin) Length = 221

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A     P+  SL Q   +   H CG  L + ++ +TAAHC+ D+P   + + LG
Sbjct: 1   IVGGHEAQPHSRPYMASL-QMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLG 59
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++ T +EP        Q+  ++  +D      D+ L++   P     ++  + +P+ D
Sbjct: 60  AHNVRT-QEPTQQHFSVAQVFLNN--YDAENKLNDILLIQLSSPANLSASVATVQLPQQD 116
Query: 511 TNFV-GTSAHVTGWGRL 526
                GT     GWGR+
Sbjct: 117 QPVPHGTQCLAMGWGRV 133

>pdb|1FON|A Chain A, Crystal Structure Of Bovine Procarboxypeptidase A-S6 Subunit Iii, A Highly Structured Truncated Zymogen E Length = 240

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 394 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHD 453
           GE A    W WQ+SL+      + H CG +L   +W VTA HC+       ++  LGE+D
Sbjct: 2   GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTSRTYQVV--LGEYD 59
Query: 454 LSTEEEPYGYQERRVQIVAS----HPQFDPRTFE--YDLALLRFYEPVKFQPNI-IPICV 506
            S  E      E+ + I A     HP ++        D+AL++     +    + +    
Sbjct: 60  RSVLEG----SEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLP 115
Query: 507 PEDDTNFVGTSAHVTGWGRLYEG 529
           P  D        +++GWGRLY G
Sbjct: 116 PAGDILPNEAPCYISGWGRLYTG 138

>pdb|1FON|A Chain A, Crystal Structure Of Bovine Procarboxypeptidase A-S6 Subunit Iii, A Highly Structured Truncated Zymogen E Length = 240

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 566 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           GE A    W WQ+SL+      + H CG +L   +W VTA HC+ 
Sbjct: 2   GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS 46

>pdb|4GAW|A Chain A, Crystal Structure Of Active Human Granzyme H Length = 226

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+ ++  Q+++     +CG  L  +++ +TAAHC      S + + LG
Sbjct: 1   IIGGHEAKPHSRPY-MAFVQFLQEKSRKRCGGILVRKDFVLTAAHC----QGSSINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++  +E    +   +  I   HP ++P+ F  D+ LL+     K+   + P+ +P   
Sbjct: 56  AHNIKEQERTQQFIPVKRPI--PHPAYNPKNFSNDIMLLQLERKAKWTTAVRPLRLPSSK 113
Query: 511 TNFV-GTSAHVTGWG 524
                G    V GWG
Sbjct: 114 AQVKPGQLCSVAGWG 128

>pdb|1SC8|U Chain U, Urokinase Plasminogen Activator B-Chain-J435 Complex Length = 262

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 381 CGRR-LFPSSRIVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVE 438
           CG++ L P  +I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  
Sbjct: 5   CGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFI 64
Query: 439 DVPPS-DLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYE 493
           D P   D ++ LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E
Sbjct: 65  DYPKKEDYIVYLGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 122
Query: 494 PVKFQPN--IIPICVPE--DDTNFVGTSAHVTGWGR 525
               QP+  I  I +P   +D  F GTS  +TG+G+
Sbjct: 123 GRCAQPSRTIQTISLPSMYNDPQF-GTSCEITGFGK 157

>pdb|1TON|A Chain A, Rat Submaxillary Gland Serine Protease, Tonin. Structure Solution And Refinement At 1.8 Angstroms Resolution Length = 235

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG K      PWQ++    + + YL  CG  L + +W +TAAHC  +    +  + LG
Sbjct: 1   IVGGYKCEKNSQPWQVA----VINEYL--CGGVLIDPSWVITAAHCYSN----NYQVLLG 50
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTF-----------EYDLALLRFYEPVKFQP 499
            ++L  ++EP+  Q R V+    HP + P                DL LL   EP     
Sbjct: 51  RNNL-FKDEPFA-QRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITG 108
Query: 500 NIIPICVPEDDTNFVGTSAHVTGWG 524
            +  I +P  +   VG++   +GWG
Sbjct: 109 GVKVIDLPTKEPK-VGSTCLASGWG 132

>pdb|1ZJK|A Chain A, Crystal Structure Of The Zymogen Catalytic Region Of Human Masp-2 Length = 403

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 380 VCGRRLFPSS-RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV- 437
           VCG     +  +I GG+KA  G +PWQ+ +     +        AL  +NW +TAAH V 
Sbjct: 150 VCGLSARTTGGQIYGGQKAKPGDFPWQVLILGGTTAA------GALLYDNWVLTAAHAVY 203
Query: 438 -EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRT-FEYDLALLRFYEPV 495
            +    S L +R+G     +      Y +   + V  H  +     F+ D+AL++    V
Sbjct: 204 EQKHDASALDIRMGTLKRLSPH----YTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKV 259
Query: 496 KFQPNIIPICVPEDD------TNFVGTSAHVTGWGRLYEGRFRRS 534
               NI PIC+P  +      T+ +GT+   +GWG    G   R+
Sbjct: 260 VINSNITPICLPRKEAESFMRTDDIGTA---SGWGLTQRGFLARN 301

>pdb|4FXG|H Chain H, Complement C4 In Complex With Masp-2 Length = 242

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV--EDVPPSDLLLR 448
           I GG+KA  G +PWQ+ +     +        AL  +NW +TAAH V  +    S L +R
Sbjct: 1   IYGGQKAKPGDFPWQVLILGGTTAA------GALLYDNWVLTAAHAVYEQKHDASALDIR 54
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFD-PRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           +G    + +     Y +   + V  H  +     F+ D+AL++    V    NI PIC+P
Sbjct: 55  MG----TLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLP 110
Query: 508 EDD------TNFVGTSAHVTGWGRLYEGRFRRS 534
             +      T+ +GT+   +GWG    G   R+
Sbjct: 111 RKEAESFMRTDDIGTA---SGWGLTQRGFLARN 140

>pdb|3TVJ|B Chain B, Catalytic Fragment Of Masp-2 In Complex With Its Specific Inhibitor Developed By Directed Evolution On Sgci Scaffold Length = 242

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV--EDVPPSDLLLR 448
           I GG+KA  G +PWQ+ +     +        AL  +NW +TAAH V  +    S L +R
Sbjct: 1   IYGGQKAKPGDFPWQVLILGGTTAA------GALLYDNWVLTAAHAVYEQKHDASALDIR 54
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFD-PRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           +G    + +     Y +   + V  H  +     F+ D+AL++    V    NI PIC+P
Sbjct: 55  MG----TLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLP 110
Query: 508 EDD------TNFVGTSAHVTGWGRLYEGRFRRS 534
             +      T+ +GT+   +GWG    G   R+
Sbjct: 111 RKEAESFMRTDDIGTA---SGWGLTQRGFLARN 140

>pdb|1EUF|A Chain A, Bovine Duodenase(New Serine Protease), Crystal Structure Length = 227

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+ ++   +  S   H CG  L  E++ +TAAHC+     S + + LG
Sbjct: 1   IIGGHEAKPHSRPY-MAFLLFKTSGKSHICGGFLVREDFVLTAAHCLG----SSINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++   E        R  I   HP ++  T   D+ LL+          + PI +P   
Sbjct: 56  AHNIMERERTQQVIPVRRPI--PHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSL 113
Query: 511 TNFV-GTSAHVTGWGRL 526
                G    V GWGRL
Sbjct: 114 AEVKPGMMCSVAGWGRL 130

>pdb|1LMW|B Chain B, Lmw U-Pa Structure Complexed With Egrcmk (Glu-Gly-Arg Chloromethyl Ketone) Length = 253

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            IC+P   +D  F GTS  +TG+G+
Sbjct: 119 TICLPSMYNDPQF-GTSCEITGFGK 142

>pdb|1OWD|A Chain A, Substituted 2-naphthamidine Inhibitors Of Urokinase Length = 245

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            IC+P   +D  F GTS  +TG+G+
Sbjct: 119 TICLPSMYNDPQF-GTSCEITGFGK 142

>pdb|1GJ7|B Chain B, Engineering Inhibitors Highly Selective For The S1 Sites Of Ser190 Trypsin-Like Serine Protease Drug Targets Length = 253

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            IC+P   +D  F GTS  +TG+G+
Sbjct: 119 TICLPSMYNDPQF-GTSCEITGFGK 142

>pdb|3IG6|B Chain B, Low Molecular Weigth Human Urokinase Type Plasminogen Activator 2-[6- (3'-Aminomethyl-Biphenyl-3-Yloxy)-4-(3-Dimethylamino- Pyrrolidin-1- Yl)-3, 5-Difluoro-Pyridin-2-Yloxy]-4-Dimethylamino-Benzoic Acid Complex Length = 253

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            IC+P   +D  F GTS  +TG+G+
Sbjct: 119 TICLPSMYNDPQF-GTSCEITGFGK 142

>pdb|1GI8|B Chain B, A Novel Serine Protease Inhibition Motif Involving A Multi- Centered Short Hydrogen Bonding Network At The Active Site Length = 245

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            IC+P   +D  F GTS  +TG+G+
Sbjct: 119 TICLPSMYNDPQF-GTSCEITGFGK 142

>pdb|1O5A|B Chain B, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (Ala190 Upa) Length = 253

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            IC+P   +D  F GTS  +TG+G+
Sbjct: 119 TICLPSMYNDPQF-GTSCEITGFGK 142

>pdb|1OWE|A Chain A, Substituted 2-Naphthamidine Inhibitors Of Urokinase Length = 245

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            IC+P   +D  F GTS  +TG+G+
Sbjct: 119 TICLPSMYNDPQF-GTSCEITGFGK 142

>pdb|1A7S|A Chain A, Atomic Resolution Structure Of Hbp Length = 225

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG KA   ++P+  S++   R    H CG AL +  + +TAA C +   P    + LG
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGR----HFCGGALIHARFVMTAASCFQSQNPGVSTVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQ--FDPRTFEYDLALLRFYEPVKFQPNIIPICVP- 507
            +DL   E     Q R+   ++S  +  +DP+    DL LL+         ++  + +P 
Sbjct: 57  AYDLRRRER----QSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPL 112
Query: 508 EDDTNFVGTSAHVTGWGRLYEG----RFRR 533
           ++ T   GT   V GWG    G    RF R
Sbjct: 113 QNATVEAGTRCQVAGWGSQRSGGRLSRFPR 142

>pdb|1FY3|A Chain A, [g175q]hbp, A Mutant Of Human Heparin Binding Protein (cap37) Length = 225

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG KA   ++P+  S++   R    H CG AL +  + +TAA C +   P    + LG
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGR----HFCGGALIHARFVMTAASCFQSQNPGVSTVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQ--FDPRTFEYDLALLRFYEPVKFQPNIIPICVP- 507
            +DL   E     Q R+   ++S  +  +DP+    DL LL+         ++  + +P 
Sbjct: 57  AYDLRRRER----QSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPL 112
Query: 508 EDDTNFVGTSAHVTGWGRLYEG----RFRR 533
           ++ T   GT   V GWG    G    RF R
Sbjct: 113 QNATVEAGTRCQVAGWGSQRSGGRLSRFPR 142

>pdb|3TJU|A Chain A, Crystal Structure Of Human Granzyme H With An Inhibitor Length = 226

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+ ++  Q+++     +CG  L  +++ +TAAHC      S + + LG
Sbjct: 1   IIGGHEAKPHSRPY-MAFVQFLQEKSRKRCGGILVRKDFVLTAAHC----QGSSINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++  +E    +   +  I   HP ++P+ F  ++ LL+     K+   + P+ +P   
Sbjct: 56  AHNIKEQERTQQFIPVKRPI--PHPAYNPKNFSNNIMLLQLERKAKWTTAVRPLRLPSSK 113
Query: 511 TNFV-GTSAHVTGWG 524
                G    V GWG
Sbjct: 114 AQVKPGQLCSVAGWG 128

>pdb|2ZCH|P Chain P, Crystal Structure Of Human Prostate Specific Antigen Complexed With An Activating Antibody Length = 237

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      PWQ+ +    R+     CG  L +  W +TAAHC+ +      ++ LG
Sbjct: 1   IVGGWECEKHSQPWQVLVASRGRAV----CGGVLVHPQWVLTAAHCIRN----KSVILLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFE-----------YDLALLRFYEPVKFQP 499
            H L   E+    Q  +V     HP +D    +           +DL LLR  EP +   
Sbjct: 53  RHSLFHPED--TGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTD 110
Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRF 531
            +  + +P  +    GT+ + +GWG +    F
Sbjct: 111 AVKVMDLPTQEPAL-GTTCYASGWGSIEPEEF 141

>pdb|1PJP|A Chain A, The 2.2 A Crystal Structure Of Human Chymase In Complex With Succinyl- Ala-Ala-Pro-Phe-Chloromethylketone Length = 226

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      P+   L     +     CG  L   N+ +TAAHC        + + LG
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+++ EE+   +Q+  V     HP+++  T  +D+ LL+  E       +  +  P   
Sbjct: 57  AHNITEEEDT--WQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQK 114
Query: 511 TNFV--GTSAHVTGWGR 525
            NFV  G    V GWGR
Sbjct: 115 -NFVPPGRMCRVAGWGR 130

>pdb|2QXG|A Chain A, Crystal Structure Of Human Kallikrein 7 In Complex With Ala- Ala-phe-chloromethylketone Length = 224

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 23/139 (16%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G     G  PWQ++L   +    LH CG  L NE W +TAAHC           ++ 
Sbjct: 1   IIDGAPCARGSHPWQVAL---LSGNQLH-CGGVLVNERWVLTAAHC-----------KMN 45
Query: 451 EHDLSTEEEPYGYQERRVQIVAS-----HPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC 505
           E+ +    +  G  +RR Q + +     HP +  +T   DL L++     +    +  + 
Sbjct: 46  EYTVHLGSDTLG--DRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVR 103
Query: 506 VPEDDTNFVGTSAHVTGWG 524
           +P       GT+  V+GWG
Sbjct: 104 LPS-RCEPPGTTCTVSGWG 121

>pdb|3BSQ|A Chain A, Crystal Structure Of Human Kallikrein 7 Produced As A Secretion Protein In E.Coli Length = 227

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 23/139 (16%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G     G  PWQ++L   +    LH CG  L NE W +TAAHC           ++ 
Sbjct: 1   IIDGAPCARGSHPWQVAL---LSGNQLH-CGGVLVNERWVLTAAHC-----------KMN 45
Query: 451 EHDLSTEEEPYGYQERRVQIVAS-----HPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC 505
           E+ +    +  G  +RR Q + +     HP +  +T   DL L++     +    +  + 
Sbjct: 46  EYTVHLGSDTLG--DRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVR 103
Query: 506 VPEDDTNFVGTSAHVTGWG 524
           +P       GT+  V+GWG
Sbjct: 104 LPS-RCEPPGTTCTVSGWG 121

>pdb|1KLT|A Chain A, Crystal Structure Of Pmsf-Treated Human Chymase At 1.9 Angstroms Resolution Length = 226

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG ++     P+   L     +     CG  L   N+ +TAAHC        + + LG
Sbjct: 1   IIGGTESKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+++ EE+   +Q+  V     HP+++  T  +D+ LL+  E       +  +  P   
Sbjct: 57  AHNITEEEDT--WQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFP-SQ 113
Query: 511 TNFV--GTSAHVTGWGR 525
            NFV  G    V GWGR
Sbjct: 114 FNFVPPGRMCRVAGWGR 130

>pdb|2WUB|A Chain A, Crystal Structure Of Hgfa In Complex With The Allosteric Non-Inhibitory Antibody Fab40.Deltatrp Length = 257

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSD-LLLRL 449
           I+GG  +  G  PW  ++  +I  ++   C  +L +  W V+AAHC    PP D + + L
Sbjct: 1   IIGGSSSLPGSHPWLAAI--YIGDSF---CAGSLVHTCWVVSAAHCFSHSPPRDSVSVVL 55
Query: 450 GEHDLS-TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP----VKFQPNIIPI 504
           G+H  + T +    +   +      +  F+P   ++DL L+R  +           + PI
Sbjct: 56  GQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPS--DHDLVLIRLKKKGDRCATRSQFVQPI 113
Query: 505 CVPEDDTNF-VGTSAHVTGWGRLYE 528
           C+PE  + F  G    + GWG L E
Sbjct: 114 CLPEPGSTFPAGHKCQIAGWGHLDE 138

>pdb|2R0L|A Chain A, Short Form Hgfa With Inhibitory Fab75 Length = 248

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSD-LLLRL 449
           I+GG  +  G  PW  ++  +I  ++   C  +L +  W V+AAHC    PP D + + L
Sbjct: 1   IIGGSSSLPGSHPWLAAI--YIGDSF---CAGSLVHTCWVVSAAHCFSHSPPRDSVSVVL 55
Query: 450 GEHDLS-TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP----VKFQPNIIPI 504
           G+H  + T +    +   +      +  F+P   ++DL L+R  +           + PI
Sbjct: 56  GQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPS--DHDLVLIRLKKKGDRCATRSQFVQPI 113
Query: 505 CVPEDDTNF-VGTSAHVTGWGRLYE 528
           C+PE  + F  G    + GWG L E
Sbjct: 114 CLPEPGSTFPAGHKCQIAGWGHLDE 138

>pdb|1NN6|A Chain A, Human Pro-Chymase Length = 228

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      P+   L     +     CG  L   N+ +TAAHC        + + LG
Sbjct: 3   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+++ EE+   +Q+  V     HP+++  T  +D+ LL+  E       +  +  P   
Sbjct: 59  AHNITEEEDT--WQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFP-SQ 115
Query: 511 TNFV--GTSAHVTGWGR 525
            NFV  G    V GWGR
Sbjct: 116 FNFVPPGRMCRVAGWGR 132

>pdb|4AFQ|A Chain A, Human Chymase - Fynomer Complex Length = 226

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      P+   L     +     CG  L   N+ +TAAHC        + + LG
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+++ EE+   +Q+  V     HP+++  T  +D+ LL+  E       +  +  P   
Sbjct: 57  AHNITEEEDT--WQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFP-SQ 113
Query: 511 TNFV--GTSAHVTGWGR 525
            NFV  G    V GWGR
Sbjct: 114 FNFVPPGRMCRVAGWGR 130

>pdb|3N7O|A Chain A, X-Ray Structure Of Human Chymase In Complex With Small Molecule Inhibitor Length = 226

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      P+   L     +     CG  L   N+ +TAAHC        + + LG
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+++ EE+   +Q+  V     HP+++  T  +D+ LL+  E       +  +  P   
Sbjct: 57  AHNITEEEDT--WQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFP-SQ 113
Query: 511 TNFV--GTSAHVTGWGR 525
            NFV  G    V GWGR
Sbjct: 114 FNFVPPGRMCRVAGWGR 130

>pdb|1NPM|A Chain A, Neuropsin, A Serine Protease Expressed In The Limbic System Of Mouse Brain Length = 225

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 403 PWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYG 462
           PWQ +L Q  R      CG  L  + W +TAAHC +        +RLG+H L + ++P  
Sbjct: 13  PWQAALFQGERLI----CGGVLVGDRWVLTAAHCKK----QKYSVRLGDHSLQSRDQP-- 62
Query: 463 YQERRVQIVAS--HPQF---DPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTS 517
             E+ +Q+  S  HP +   +P    +D+ L+R          + P+ +  +    VG  
Sbjct: 63  --EQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLA-NLCPKVGQK 119
Query: 518 AHVTGWG 524
             ++GWG
Sbjct: 120 CIISGWG 126

>pdb|3H7T|A Chain A, Crystal Structure Of Scabies Mite Inactivated Protease Paralogue S-D1 (Smipp-S-D1) Length = 235

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 28/190 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG+K+   K PW + +    +      CG ++   N+ +TAA CV+   PSD+ +  G
Sbjct: 1   IIGGKKSDITKEPWAVGVLVDEKPF----CGGSILTANFVITAAQCVDGTKPSDISIHYG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNI-----IPIC 505
               +T+        +++ IV  H    P T + + A++    P+K          +P  
Sbjct: 57  SSYRTTKGT--SVMAKKIYIVRYH----PLTMQNNYAVIETEMPIKLDDKTTKKIELPSL 110
Query: 506 V--PEDDTNFVGTSAHVTGWGRL------YEGRFRRSYGHPATRQEMATCWNHFLGNRIL 557
           +  PE D     TS  V+GWG        Y G    +      R+     +     ++ +
Sbjct: 111 LYDPEPD-----TSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYI 165
Query: 558 FPSSRIVGGE 567
           +      GGE
Sbjct: 166 YDGVFCAGGE 175

>pdb|1RTF|B Chain B, Complex Of Benzamidine With The Catalytic Domain Of Human Two Chain Tissue Plasminogen Activator [(Tc)-T-Pa] Length = 252

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHK--CGAALFNENWAVTAAHCVED-VPPSDLLL 447
           I GG  A     PWQ ++    R +   +  CG  L +  W ++AAHC ++  PP  L +
Sbjct: 1   IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTV 60
Query: 448 RLGE--HDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP----VKFQPNI 501
            LG     +  EEE    Q+  V+    H +FD  T++ D+ALL+         +    +
Sbjct: 61  ILGRTYRVVPGEEE----QKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVV 116
Query: 502 IPICVPEDDTNFVG-TSAHVTGWGR------LYEGRFRRSYG--HPATRQEMATCWNHFL 552
             +C+P  D      T   ++G+G+       Y  R + ++   +P++R       N  +
Sbjct: 117 RTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTV 176
Query: 553 GNRILFPSSRIVGGEKATF 571
            + +L       GG +A  
Sbjct: 177 TDNMLCAGDTRSGGPQANL 195

>pdb|1A5I|A Chain A, Catalytic Domain Of Vampire Bat (Desmodus Rotundus) Saliva Plasminogen Activator In Complex With Egr-Cmk (Glu-Gly-Arg Chloromethyl Ketone) Length = 265

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 28/200 (14%)
Query: 380 VCGRRLF--PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHK--CGAALFNENWAVTAAH 435
            CG R +  P     GG        PWQ ++    R +   +  CG  L +  W +TAAH
Sbjct: 1   TCGLRKYKEPQLHSTGGLFTDITSHPWQAAIFAQNRRSSGERFLCGGILISSCWVLTAAH 60
Query: 436 CV-EDVPPSDLLLRLGE-HDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFY- 492
           C  E   P  L + LG  + +   EE    Q  +V+    H +FD  T+  D+ALL+   
Sbjct: 61  CFQESYLPDQLKVVLGRTYRVKPGEEE---QTFKVKKYIVHKEFDDDTYNNDIALLQLKS 117
Query: 493 ---EPVKFQPNIIPICVPEDDTNFVG-TSAHVTGWGR-----------LYEGRFRRSYGH 537
              +  +   ++  IC+PE +      T   ++G+G+           L EG  R    +
Sbjct: 118 DSPQCAQESDSVRAICLPEANLQLPDWTECELSGYGKHKSSSPFYSEQLKEGHVRL---Y 174
Query: 538 PATRQEMATCWNHFLGNRIL 557
           P++R      +N  + N +L
Sbjct: 175 PSSRCAPKFLFNKTVTNNML 194

>pdb|1FV9|A Chain A, Crystal Structure Of Human Microurokinase In Complex With 2- Amino-5-Hydroxy-Benzimidazole Length = 245

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            I +P   +D  F GTS  +TG+G+
Sbjct: 119 TIALPSMYNDPQF-GTSCEITGFGK 142

>pdb|3MWI|U Chain U, The Complex Crystal Structure Of Urokianse And 5-Nitro-1h-Indole-2- Amidine Length = 246

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            I +P   +D  F GTS  +TG+G+
Sbjct: 119 TIALPSMYNDPQF-GTSCEITGFGK 142

>pdb|2NWN|A Chain A, New Pharmacophore For Serine Protease Inhibition Revealed By Crystal Structure Of Human Urokinase-Type Plasminogen Activator Complexed With A Cyclic Peptidyl Inhibitor, Upain-1 Length = 253

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            I +P   +D  F GTS  +TG+G+
Sbjct: 119 TIALPSMYNDPQF-GTSCEITGFGK 142

>pdb|2O8U|A Chain A, Crystal Structure And Binding Epitopes Of Urokinase-Type Plasminogen Activator (C122aN145QS195A) IN COMPLEX WITH Inhibitors Length = 253

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            I +P   +D  F GTS  +TG+G+
Sbjct: 119 TIALPSMYNDPQF-GTSCEITGFGK 142

>pdb|1EJN|A Chain A, Urokinase Plasminogen Activator B-Chain Inhibitor Complex Length = 253

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            I +P   +D  F GTS  +TG+G+
Sbjct: 119 TISLPSMYNDPQF-GTSCEITGFGK 142

>pdb|4FU7|A Chain A, Crystal Structure Of The Urokinase Length = 246

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            I +P   +D  F GTS  +TG+G+
Sbjct: 119 TIALPSMYNDPQF-GTSCEITGFGK 142

>pdb|1W0Z|U Chain U, Urokinase Type Plasminogen Activator Length = 247

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 391 IVGGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS-DLLLR 448
           I+GGE  T    PW  ++ R+    +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALL--RFYEPVKFQPN--II 502
           LG   L++  +  G  +  V+ +  H  +   T  +  D+ALL  R  E    QP+  I 
Sbjct: 61  LGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPE--DDTNFVGTSAHVTGWGR 525
            I +P   +D  F GTS  +TG+G+
Sbjct: 119 TISLPSMYNDPQF-GTSCEITGFGK 142

>pdb|1AU8|A Chain A, Human Cathepsin G Length = 224

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG ++     P+   L Q        +CG  L  E++ +TAAHC      S++ + LG
Sbjct: 1   IIGGRESRPHSRPYMAYL-QIQSPAGQSRCGGFLVREDFVLTAAHCWG----SNINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++   E    +   R  I   HPQ++ RT + D+ LL+    V+   N+ P+ +P   
Sbjct: 56  AHNIQRRENTQQHITARRAI--RHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQ 113
Query: 511 TNFV-GTSAHVTGWGRL 526
                GT   V GWGR+
Sbjct: 114 EGLRPGTLCTVAGWGRV 130

>pdb|1PPZ|A Chain A, Trypsin Complexes At Atomic And Ultra-High Resolution Length = 224

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 20/144 (13%)
Query: 391 IVGGEKATFGKWPWQISLRQ----WIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLL 446
           IVGG  A+ G +P+ +S+ +    W        CG +L N N  +TAAHCV     S   
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPW--------CGGSLLNANTVLTAAHCVSGYAQSGFQ 52
Query: 447 LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           +R G    ++     G     +  V  HP +       DLA+L+    +    NI    +
Sbjct: 53  IRAGSLSRTS-----GGITSSLSSVRVHPSYSGNN--NDLAILKLSTSIPSGGNIGYARL 105
Query: 507 PEDDTNFV-GTSAHVTGWGRLYEG 529
               ++ V G+SA V GWG   EG
Sbjct: 106 AASGSDPVAGSSATVAGWGATSEG 129

>pdb|2PSX|A Chain A, Crystal Structure Of Human Kallikrein 5 In Complex With Leupeptin Length = 227

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G        PWQ +L   +R   L+ CGA L +  W +TAAHC + V      +RLG
Sbjct: 1   IINGSDCDMHTQPWQAAL--LLRPNQLY-CGAVLVHPQWLLTAAHCRKKV----FRVRLG 53
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            + LS   E  G Q  +      HP +       DL L++    ++   ++ PI V    
Sbjct: 54  HYSLSPVYES-GQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHC 112
Query: 511 TNFVGTSAHVTGWG 524
            +  GT   V+GWG
Sbjct: 113 PS-AGTKCLVSGWG 125

>pdb|1GDU|A Chain A, Fusarium Oxysporum Trypsin At Atomic Resolution Length = 224

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 20/144 (13%)
Query: 391 IVGGEKATFGKWPWQISLRQ----WIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLL 446
           IVGG  A+ G +P+ +S+ +    W        CG +L N N  +TAAHCV     S   
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPW--------CGGSLLNANTVLTAAHCVSGYAQSGFQ 52
Query: 447 LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           +R G    ++     G     +  V  HP +       DLA+L+    +    NI    +
Sbjct: 53  IRAGSLSRTS-----GGITSSLSSVRVHPSYSGNN--NDLAILKLSTSIPSGGNIGYARL 105
Query: 507 PEDDTNFV-GTSAHVTGWGRLYEG 529
               ++ V G+SA V GWG   EG
Sbjct: 106 AASGSDPVAGSSATVAGWGATSEG 129

>pdb|4GSO|A Chain A, Structure Of Jararacussin-I Length = 232

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++GG++    + P+   L      ++ + CG  L N+ W VTAAHC      ++  ++LG
Sbjct: 1   VLGGDECDINEHPFLAFLY-----SHGYFCGLTLINQEWVVTAAHCDS----TNFQMQLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H      E    +  + + +  +        + D+ L++  +P+    +I P+ +P + 
Sbjct: 52  VHSKKVLNEDEQTRNPKEKFICPNKNMS-EVLDKDIMLIKLDKPISNSKHIAPLSLPSNP 110
Query: 511 TNFVGTSAHVTGWGRL 526
            + VG+   + GWG +
Sbjct: 111 PS-VGSVCRIMGWGSI 125

>pdb|2XRC|A Chain A, Human Complement Factor I Length = 565

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 12/171 (7%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
           RIVGG++A  G  PWQ++++     T    CG       W +TAAHC+         +  
Sbjct: 321 RIVGGKRAQLGDLPWQVAIKDASGIT----CGGIYIGGCWILTAAHCLRASKTHRYQIWT 376
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQ----PNIIPIC 505
              D    +      E   +I+  H  ++  T++ D+AL+   +    +    P  IP C
Sbjct: 377 TVVDWIHPDLKRIVIEYVDRIIF-HENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPAC 435
Query: 506 VPEDDTNFV-GTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNR 555
           VP     F    +  V+GWGR  E    R +       ++ +  + F GNR
Sbjct: 436 VPWSPYLFQPNDTCIVSGWGR--EKDNERVFSLQWGEVKLISNCSKFYGNR 484

>pdb|2XRC|A Chain A, Human Complement Factor I Length = 565

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 552 LGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE- 610
           + NR+     RIVGG++A  G  PWQ++++     T    CG       W +TAAHC+  
Sbjct: 311 VKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASGIT----CGGIYIGGCWILTAAHCLRA 366
Query: 611 ------DLWSQIIPIIQ 621
                  +W+ ++  I 
Sbjct: 367 SKTHRYQIWTTVVDWIH 383

>pdb|1KYN|B Chain B, Cathepsin-G Length = 235

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG ++     P+   L Q        +CG  L  E++ +TAAHC      S++ + LG
Sbjct: 1   IIGGRESRPHSRPYMAYL-QIQSPAGQSRCGGFLVREDFVLTAAHCWG----SNINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++   E    +   R  I   HPQ++ RT + D+ LL+    V+   N+ P+ +P   
Sbjct: 56  AHNIQRRENTQQHITARRAI--RHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQ 113
Query: 511 TNFV-GTSAHVTGWGRL 526
                GT   V GWGR+
Sbjct: 114 EGLRPGTLCTVAGWGRV 130

>pdb|3FZZ|A Chain A, Structure Of Grc Length = 227

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 420 CGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP 479
           CG  L  + + +TAAHC        + + LG H++  +EE    Q   V     HP ++P
Sbjct: 30  CGGFLVRDKFVLTAAHC----KGRSMTVTLGAHNIKAKEET--QQIIPVAKAIPHPDYNP 83
Query: 480 RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFV-GTSAHVTGWGRLY-EGRFRRSYGH 537
                D+ LL+     K    + P+ +P  + +   G   +V GWG++  +G F ++   
Sbjct: 84  DDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHE 143
Query: 538 -PATRQEMATCWNHF-----LGNRILFPSSRIVGG 566
              T Q+   C + F       N I    S+I G 
Sbjct: 144 VKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGA 178

>pdb|3G01|A Chain A, Structure Of Grc Mutant E192rE193G Length = 227

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 420 CGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP 479
           CG  L  + + +TAAHC        + + LG H++  +EE    Q   V     HP ++P
Sbjct: 30  CGGFLVRDKFVLTAAHC----KGRSMTVTLGAHNIKAKEET--QQIIPVAKAIPHPDYNP 83
Query: 480 RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFV-GTSAHVTGWGRLY-EGRFRRSYGH 537
                D+ LL+     K    + P+ +P  + +   G   +V GWG++  +G F ++   
Sbjct: 84  DDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHE 143
Query: 538 -PATRQEMATCWNHF-----LGNRILFPSSRIVG 565
              T Q+   C + F       N I    S+I G
Sbjct: 144 VKLTVQKDQVCESQFQSSYNRANEICVGDSKIKG 177

>pdb|2RDL|A Chain A, Hamster Chymase 2 Length = 226

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 9/137 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      P+   L       +L  C   L   N+ +TAAHC        + + LG
Sbjct: 1   IIGGTECRPHARPYMAYLEIVTPENHLSACSGFLIRRNFVMTAAHCAG----RSITVLLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNI--IPICVPE 508
            H+   +E+   +Q+  V+    HP++D R    D+ LL+  E       +  +PI   +
Sbjct: 57  AHNKKVKED--TWQKLEVEKQFPHPKYDDRLVLNDIMLLKLKEKANLTLGVGTLPISA-K 113
Query: 509 DDTNFVGTSAHVTGWGR 525
            ++   G      GWGR
Sbjct: 114 SNSIPPGRVCRAVGWGR 130

>pdb|3H7O|A Chain A, Crystal Structure Of Scabies Mite Inactivated Protease Paralogue S-I1 (Smipp-S-I1) Length = 228

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 393 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEH 452
           GGEK    + PW +++R +     L  CG A+ ++ + +TAAHCV D  P  ++++    
Sbjct: 2   GGEKTDIKQVPWTVAVRTYPGEESL-TCGGAILSQWFVLTAAHCVFDQKPETIVIQYEST 60
Query: 453 DLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF-----QPNIIPICVP 507
           +L   E+P         +  S   +   T E D+A+L    P+K      +P  +P    
Sbjct: 61  NLW--EDPGKSDPYVSHVYLSF--YRQETMENDIAILELSRPLKLDGLKSKPAKLP---- 112
Query: 508 EDDTNF---VGTSAHVTGWG 524
             D  F    G+   V+G+G
Sbjct: 113 --DIEFRPKTGSDVLVSGYG 130

>pdb|3H7O|A Chain A, Crystal Structure Of Scabies Mite Inactivated Protease Paralogue S-I1 (Smipp-S-I1) Length = 228

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 565 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCR 624
           GGEK    + PW +++R +     L  CG A+ ++ + +TAAHCV D   + I I    +
Sbjct: 2   GGEKTDIKQVPWTVAVRTYPGEESL-TCGGAILSQWFVLTAAHCVFDQKPETIVI----Q 56
Query: 625 RRESNLWK 632
              +NLW+
Sbjct: 57  YESTNLWE 64

>pdb|1PPG|E Chain E, The Refined 2.3 Angstroms Crystal Structure Of Human Leukocyte Elastase In A Complex With A Valine Chloromethyl Ketone Inhibitor Length = 218

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP+ +SL+  +R    H CGA L   N+ ++AAHCV +V    + + LG
Sbjct: 1   IVGGRRARPHAWPFMVSLQ--LRGG--HFCGATLIAPNFVMSAAHCVANVNVRAVRVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+LS  E     Q   VQ +  +  +DP     D+ +L+         N+    +P   
Sbjct: 57  AHNLSRREPT--RQVFAVQRIFEN-GYDPVNLLNDIVILQLNGSATINANVQVAQLPAQG 113
Query: 511 TNF-VGTSAHVTGWGRLYEGR 530
                G      GWG L   R
Sbjct: 114 RRLGNGVQCLAMGWGLLGRNR 134

>pdb|1PPF|E Chain E, X-Ray Crystal Structure Of The Complex Of Human Leukocyte Elastase (Pmn Elastase) And The Third Domain Of The Turkey Ovomucoid Inhibitor Length = 218

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP+ +SL+  +R    H CGA L   N+ ++AAHCV +V    + + LG
Sbjct: 1   IVGGRRARPHAWPFMVSLQ--LRGG--HFCGATLIAPNFVMSAAHCVANVNVRAVRVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+LS  E     Q   VQ +  +  +DP     D+ +L+         N+    +P   
Sbjct: 57  AHNLSRREPT--RQVFAVQRIFEN-GYDPVNLLNDIVILQLNGSATINANVQVAQLPAQG 113
Query: 511 TNF-VGTSAHVTGWGRLYEGR 530
                G      GWG L   R
Sbjct: 114 RRLGNGVQCLAMGWGLLGRNR 134

>pdb|2RG3|A Chain A, Covalent Complex Structure Of Elastase Length = 218

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP+ +SL+  +R    H CGA L   N+ ++AAHCV +V    + + LG
Sbjct: 1   IVGGRRARPHAWPFMVSLQ--LRGG--HFCGATLIAPNFVMSAAHCVANVNVRAVRVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+LS  E     Q   VQ +  +  +DP     D+ +L+         N+    +P   
Sbjct: 57  AHNLSRREPT--RQVFAVQRIFEN-GYDPVNLLNDIVILQLNGSATINANVQVAQLPAQG 113
Query: 511 TNF-VGTSAHVTGWGRLYEGR 530
                G      GWG L   R
Sbjct: 114 RRLGNGVQCLAMGWGLLGRNR 134

>pdb|1HNE|E Chain E, Structure Of Human Neutrophil Elastase In Complex With A Peptide Chloromethyl Ketone Inhibitor At 1.84-Angstroms Resolution Length = 218

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP+ +SL+  +R    H CGA L   N+ ++AAHCV +V    + + LG
Sbjct: 1   IVGGRRARPHAWPFMVSLQ--LRGG--HFCGATLIAPNFVMSAAHCVANVNVRAVRVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVAS--HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            H+LS  E       R+V  V       +DP     D+ +L+         N+    +P 
Sbjct: 57  AHNLSRREP-----TRQVFAVQRIFEDGYDPVNLLNDIVILQLNGSATINANVQVAQLPA 111
Query: 509 DDTNF-VGTSAHVTGWGRLYEGR 530
                  G      GWG L   R
Sbjct: 112 QGRRLGNGVQCLAMGWGLLGRNR 134

>pdb|1XVM|A Chain A, Trypsin From Fusarium Oxysporum- Room Temperature To Atomic Resolution Length = 224

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 392 VGGEKATFGKWPWQISLRQ----WIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLL 447
           VGG  A+ G +P+ +S+ +    W        CG +L N N  +TAAHCV     S   +
Sbjct: 2   VGGTSASAGDFPFIVSISRNGGPW--------CGGSLLNANTVLTAAHCVSGYAQSGFQI 53
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           R G    ++     G     +  V  HP +       DLA+L+    +    NI    + 
Sbjct: 54  RAGSLSRTS-----GGITSSLSSVRVHPSYSGNN--NDLAILKLSTSIPSGGNIGYARLA 106
Query: 508 EDDTNFV-GTSAHVTGWGRLYEG 529
              ++ V G+SA V GWG   EG
Sbjct: 107 ASGSDPVAGSSATVAGWGATSEG 129

>pdb|2XWB|F Chain F, Crystal Structure Of Complement C3b In Complex With Factors B And D Length = 732

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 24/121 (19%)
Query: 399 FGKWPWQISLRQWIRSTYLHK-CGAALFNENWAVTAAHC--VEDVPPSDLLLRLGEHDLS 455
           + K PWQ  +   IR +  H+ C  A+ +E + +TAAHC  V+D   S  +   GE    
Sbjct: 456 YHKQPWQAKI-SVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK--- 511
Query: 456 TEEEPYGYQERRVQIVASHPQFD---------PRTFEYDLALLRFYEPVKFQPNIIPICV 506
                   ++  +++V  HP ++         P  ++YD+AL++    +K+   I PIC+
Sbjct: 512 --------RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICL 563
Query: 507 P 507
           P
Sbjct: 564 P 564

>pdb|2OK5|A Chain A, Human Complement Factor B Length = 752

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 24/121 (19%)
Query: 399 FGKWPWQISLRQWIRSTYLHK-CGAALFNENWAVTAAHC--VEDVPPSDLLLRLGEHDLS 455
           + K PWQ  +   IR +  H+ C  A+ +E + +TAAHC  V+D   S  +   GE    
Sbjct: 475 YHKQPWQAKI-SVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK--- 530
Query: 456 TEEEPYGYQERRVQIVASHPQFD---------PRTFEYDLALLRFYEPVKFQPNIIPICV 506
                   ++  +++V  HP ++         P  ++YD+AL++    +K+   I PIC+
Sbjct: 531 --------RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICL 582
Query: 507 P 507
           P
Sbjct: 583 P 583

>pdb|3HRZ|D Chain D, Cobra Venom Factor (Cvf) In Complex With Human Factor B Length = 741

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 24/121 (19%)
Query: 399 FGKWPWQISLRQWIRSTYLHK-CGAALFNENWAVTAAHC--VEDVPPSDLLLRLGEHDLS 455
           + K PWQ  +   IR +  H+ C  A+ +E + +TAAHC  V+D   S  +   GE    
Sbjct: 465 YHKQPWQAKI-SVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK--- 520
Query: 456 TEEEPYGYQERRVQIVASHPQFD---------PRTFEYDLALLRFYEPVKFQPNIIPICV 506
                   ++  +++V  HP ++         P  ++YD+AL++    +K+   I PIC+
Sbjct: 521 --------RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICL 572
Query: 507 P 507
           P
Sbjct: 573 P 573

>pdb|1RRK|A Chain A, Crystal Structure Analysis Of The Bb Segment Of Factor B Length = 497

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 28/123 (22%)
Query: 399 FGKWPWQISLRQWIRSTYLHK-CGAALFNENWAVTAAHC--VEDVPPSDLLLRLGEHDLS 455
           + K PWQ  +   IR +  H+ C  A+ +E + +TAAHC  V+D           EH + 
Sbjct: 223 YHKQPWQAKI-SVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDD----------KEHSIK 271
Query: 456 TEEEPYGYQER--RVQIVASHPQFD---------PRTFEYDLALLRFYEPVKFQPNIIPI 504
                 G ++R   +++V  HP ++         P  ++YD+AL++    +K+   I PI
Sbjct: 272 VS---VGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPI 328
Query: 505 CVP 507
           C+P
Sbjct: 329 CLP 331

>pdb|2WIN|I Chain I, C3 Convertase (C3bbb) Stabilized By Scin Length = 507

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 28/123 (22%)
Query: 399 FGKWPWQISLRQWIRSTYLHK-CGAALFNENWAVTAAHC--VEDVPPSDLLLRLGEHDLS 455
           + K PWQ  +   IR +  H+ C  A+ +E + +TAAHC  V+D           EH + 
Sbjct: 231 YHKQPWQAKI-SVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDD----------KEHSIK 279
Query: 456 TEEEPYGYQER--RVQIVASHPQFD---------PRTFEYDLALLRFYEPVKFQPNIIPI 504
                 G ++R   +++V  HP ++         P  ++YD+AL++    +K+   I PI
Sbjct: 280 VS---VGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPI 336
Query: 505 CVP 507
           C+P
Sbjct: 337 CLP 339

>pdb|1MZA|A Chain A, Crystal Structure Of Human Pro-Granzyme K Length = 240

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC----VEDVPPSDLL 446
           I+GG++ +    P+  S++        H CG  L +  W +TAAHC     +   P+   
Sbjct: 3   IIGGKEVSPHSRPFMASIQYGGH----HVCGGVLIDPQWVLTAAHCQYRFTKGQSPT--- 55
Query: 447 LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           + LG H LS  E      E +  I  S    DP++   D+ L++     K   ++  + +
Sbjct: 56  VVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQS--NDIMLVKLQTAAKLNKHVKMLHI 113
Query: 507 PEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
               +   GT   VTGWG       R S
Sbjct: 114 RSKTSLRSGTKCKVTGWGATDPDSLRPS 141

>pdb|1DLE|A Chain A, Factor B Serine Protease Domain Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 28/123 (22%)
Query: 399 FGKWPWQISLRQWIRSTYLHK-CGAALFNENWAVTAAHC--VEDVPPSDLLLRLGEHDLS 455
           + K PWQ  +   IR +  H+ C  A+ +E + +TAAHC  V+D           EH + 
Sbjct: 24  YHKQPWQAKI-SVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDD----------KEHSIK 72
Query: 456 TEEEPYGYQER--RVQIVASHPQFD---------PRTFEYDLALLRFYEPVKFQPNIIPI 504
                 G ++R   +++V  HP ++         P  ++YD+AL++    +K+   I PI
Sbjct: 73  VS---VGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPI 129
Query: 505 CVP 507
           C+P
Sbjct: 130 CLP 132

>pdb|2HNT|C Chain C, Crystallographic Structure Of Human Gamma-Thrombin Length = 70

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV------EDVPPSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+      ++   +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEH 452
           LL+R+G+H
Sbjct: 59  LLVRIGKH 66

>pdb|1B0F|A Chain A, Crystal Structure Of Human Neutrophil Elastase With Mdl 101, 146 Length = 218

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 60/143 (41%), Gaps = 12/143 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP+ +SL+        H CGA L   N+ ++AAHCV +V    + + LG
Sbjct: 1   IVGGRRARPHAWPFMVSLQL----AGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVAS--HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            H+LS  E       R+V  V       +DP     D+ +L+         N+    +P 
Sbjct: 57  AHNLSRREP-----TRQVFAVQRIFEDGYDPVNLLNDIVILQLNGSATINANVQVAQLPA 111
Query: 509 DDTNF-VGTSAHVTGWGRLYEGR 530
                  G      GWG L   R
Sbjct: 112 QGRRLGNGVQCLAMGWGLLGRNR 134

>pdb|2AIP|A Chain A, Crystal Structure Of Native Protein C Activator From The Venom Of Copperhead Snake Agkistrodon Contortrix Contortrix Length = 231

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 420 CGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP 479
           CG  L N+ W +TA HC       ++ + LG H+L    +    +  + +    + + D 
Sbjct: 25  CGGTLINQEWVLTARHCDR----GNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRND- 79
Query: 480 RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRL 526
             ++ D+ L+R   PV+   +I P+ +P +  + VG+   + GWG +
Sbjct: 80  TIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPPS-VGSVCRIMGWGTI 125

>pdb|1SI5|H Chain H, Protease-Like Domain From 2-Chain Hepatocyte Growth Factor Length = 240

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 65/174 (37%), Gaps = 18/174 (10%)
Query: 404 WQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGY 463
           W +SLR   +    H CG +L  E+W +TA  C       D    LG HD+    +    
Sbjct: 13  WMVSLRYRNK----HICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCK 68
Query: 464 QERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFV-GTSAHVTG 522
           Q   V  +   P+        DL L++   P      +  I +P   +     TS  V G
Sbjct: 69  QVLNVSQLVYGPEGS------DLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYG 122
Query: 523 WGRL----YEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFG 572
           WG      Y+G  R ++ +    ++   C  H  G   L  S    G EK   G
Sbjct: 123 WGYTGLINYDGLLRVAHLYIMGNEK---CSQHHRGKVTLNESEICAGAEKIGSG 173

>pdb|1SHY|A Chain A, The Crystal Structure Of Hgf Beta-Chain In Complex With The Sema Domain Of The Met Receptor Length = 234

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 65/174 (37%), Gaps = 18/174 (10%)
Query: 404 WQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGY 463
           W +SLR   +    H CG +L  E+W +TA  C       D    LG HD+    +    
Sbjct: 13  WMVSLRYRNK----HICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCK 68
Query: 464 QERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFV-GTSAHVTG 522
           Q   V  +   P+        DL L++   P      +  I +P   +     TS  V G
Sbjct: 69  QVLNVSQLVYGPEGS------DLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYG 122
Query: 523 WGRL----YEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFG 572
           WG      Y+G  R ++ +    ++   C  H  G   L  S    G EK   G
Sbjct: 123 WGYTGLINYDGLLRVAHLYIMGNEK---CSQHHRGKVTLNESEICAGAEKIGSG 173

>pdb|3BEU|A Chain A, Na+-Dependent Allostery Mediates Coagulation Factor Protease Active Site Selectivity Length = 224

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRL 449
           +VGG +A  G++P+ + L           CG AL+ ++  +TAAHCV      + +    
Sbjct: 1   VVGGTRAAQGEFPFMVRLSM--------GCGGALYAQDIVLTAAHCVSGSGNNTSITATG 52
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNI-IPICVPE 508
           G  DL +       + R  +++ + P F   T+  D AL++  +P+  QP + I      
Sbjct: 53  GVVDLQSSS---AVKVRSTKVLQA-PGFTKETYGKDWALIKLAQPIN-QPTLKIATTTAY 107
Query: 509 DDTNFVGTSAHVTGWGRLYEGRFRRSY 535
           +   F      V GWG   EG  ++ Y
Sbjct: 108 NQGTFT-----VAGWGANREGGSQQRY 129

>pdb|3I78|A Chain A, 3599170186220-Loops Of Fxa In Sgt Length = 229

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRL 449
           +VGG +A  G++P+ + L   I       CG AL+ ++  +TAAHCV      + +    
Sbjct: 1   VVGGTRAAQGEFPFMVRL---INEENEGFCGGALYAQDIVLTAAHCVSGSGNNTSITATG 57
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNI-IPICVPE 508
           G  DL +       + R  +++ + P F   T+  D AL++  +P+  QP + I      
Sbjct: 58  GVVDLQSSS---AVKVRSTKVLQA-PGFTKETYGKDWALIKLAQPIN-QPTLKIATTTAY 112
Query: 509 DDTNFVGTSAHVTGWGRLYEGRFRRSY 535
           +   F      V GWG   EG  ++ Y
Sbjct: 113 NQGTFT-----VAGWGANREGGSQQRY 134

>pdb|3I77|A Chain A, 3599170-Loops Of Fxa In Sgt Length = 230

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRL 449
           +VGG +A  G++P+ + L   I       CG AL+ ++  +TAAHCV      + +    
Sbjct: 1   VVGGTRAAQGEFPFMVRL---INEENEGFCGGALYAQDIVLTAAHCVSGSGNNTSITATG 57
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNI-IPICVPE 508
           G  DL +       + R  +++ + P F   T+  D AL++  +P+  QP + I      
Sbjct: 58  GVVDLQSSS---AVKVRSTKVLQA-PGFTKETYGKDWALIKLAQPIN-QPTLKIATTTAY 112
Query: 509 DDTNFVGTSAHVTGWGRLYEGRFRRSY 535
           +   F      V GWG   EG  ++ Y
Sbjct: 113 NQGTFT-----VAGWGANREGGSQQRY 134

>pdb|3RP2|A Chain A, The Structure Of Rat Mast Cell Protease Ii At 1.9-Angstroms Resolution Length = 224

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG ++     P+   L           CG  L +  + +TAAHC       ++ + LG
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHC----KGREITVILG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQP--NIIPICVPE 508
            HD+   E     Q+ +V+    H  ++     +D+ LL+  + V+  P  N++P+  P 
Sbjct: 57  AHDVRKRES--TQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPS 114
Query: 509 DDTNFVGTSAHVTGWGR 525
           D  +  G      GWG+
Sbjct: 115 DFIH-PGAMCWAAGWGK 130

>pdb|2HNT|E Chain E, Crystallographic Structure Of Human Gamma-Thrombin Length = 81

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 474 HPQFDPR-TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF----VGTSAHVTGWGRLYE 528
           HP+++ R   + D+AL++  +PV F   I P+C+P+ +T       G    VTGWG L E
Sbjct: 14  HPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 73

>pdb|4E7N|A Chain A, Crystal Structure Of Ahv_tl-I, A Glycosylated Snake-Venom Thrombin- Like Enzyme From Agkistrodon Halys Length = 238

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG++    +  + ++L      T    CG  L N+ W +TAAHC       +  ++LG
Sbjct: 1   IIGGDECNINEHRFLVALYTSRSRTLF--CGGTLINQEWVLTAAHCDR----KNFRIKLG 54
Query: 451 EHD--LSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            H   +  E+E     + +   ++S    +   ++ D+ L+R   PVK   +I P     
Sbjct: 55  MHSKKVPNEDEQTRVPKEKFFCLSSK---NYTLWDKDIMLIRLDSPVKNSKHIAPF-SLP 110
Query: 509 DDTNFVGTSAHVTGWGRL 526
                VG+   + GWGR+
Sbjct: 111 SSPPSVGSVCRIMGWGRI 128

>pdb|3H5C|B Chain B, X-Ray Structure Of Protein Z-Protein Z Inhibitor Complex Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 403 PWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR---LGEHDLSTEEE 459
           PWQ+ L       +   CG  +  EN+ +T A C        LL R   +  +   T ++
Sbjct: 106 PWQVKLTNSEGKDF---CGGVIIRENFVLTTAKC-------SLLHRNITVKTYFNRTSQD 155
Query: 460 PYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN----FVG 515
           P   +   V +   H ++D    E DL+LL    P++     +P+C PE D         
Sbjct: 156 PLMIKITHVHV---HMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPR 212
Query: 516 TSAHVTGWGR 525
           T   ++GW R
Sbjct: 213 TRGLLSGWAR 222

>pdb|3F1S|B Chain B, Crystal Structure Of Protein Z Complexed With Protein Z-Dependent Inhibitor Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 403 PWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLR---LGEHDLSTEEE 459
           PWQ+ L       +   CG  +  EN+ +T A C        LL R   +  +   T ++
Sbjct: 65  PWQVKLTNSEGKDF---CGGVIIRENFVLTTAKC-------SLLHRNITVKTYFNRTSQD 114
Query: 460 PYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD----TNFVG 515
           P   +   V +   H ++D    E DL+LL    P++     +P+C PE D         
Sbjct: 115 PLMIKITHVHV---HMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPR 171
Query: 516 TSAHVTGWGR 525
           T   ++GW R
Sbjct: 172 TRGLLSGWAR 181

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	697
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	2e-55
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	1e-17
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	1e-09
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	2e-55
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	3e-21
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	1e-08
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	7e-54
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	4e-14
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	2e-10
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	1e-51
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	2e-18
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	9e-12
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	1e-50
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	7e-18
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	2e-11
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	3e-50
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	1e-16
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	1e-11
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	4e-50
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	1e-15
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	1e-08
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	4e-50
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	6e-18
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	2e-11
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	5e-50
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	2e-17
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	5e-11
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	3e-49
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	3e-16
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	2e-10
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	3e-49
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	3e-18
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	3e-09
1md8_A	329	C1R complement serine protease; innate immunity, a	3e-49
1md8_A	329	C1R complement serine protease; innate immunity, a	8e-18
1md8_A	329	C1R complement serine protease; innate immunity, a	3e-12
1gpz_A	399	Complement C1R component; hydrolase, activation, i	1e-48
1gpz_A	399	Complement C1R component; hydrolase, activation, i	3e-17
1gpz_A	399	Complement C1R component; hydrolase, activation, i	9e-12
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	2e-48
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	2e-18
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	4e-10
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	2e-48
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	2e-16
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	1e-10
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	2e-48
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	5e-16
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	2e-13
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	6e-48
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	4e-18
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	7e-08
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	7e-48
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	5e-17
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	6e-10
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	1e-47
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	3e-17
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	2e-10
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	3e-47
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	7e-17
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	2e-11
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	4e-47
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	1e-16
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	2e-09
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	5e-47
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	3e-18
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	6e-08
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	8e-47
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	8e-17
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	1e-10
1aut_C	250	Activated protein C; serine proteinase, plasma cal	8e-47
1aut_C	250	Activated protein C; serine proteinase, plasma cal	2e-15
1aut_C	250	Activated protein C; serine proteinase, plasma cal	4e-08
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	4e-46
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	8e-17
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	7e-13
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	7e-46
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	6e-16
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	7e-11
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	9e-46
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	1e-16
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	3e-08
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	2e-45
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	5e-16
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	3e-12
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	3e-45
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	4e-16
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	9e-11
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	4e-45
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	1e-15
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	9e-10
1elv_A	333	Complement C1S component; trypsin-like serin prote	4e-45
1elv_A	333	Complement C1S component; trypsin-like serin prote	1e-16
1elv_A	333	Complement C1S component; trypsin-like serin prote	9e-08
2xrc_A	565	Human complement factor I; immune system, hydrolas	7e-45
2xrc_A	565	Human complement factor I; immune system, hydrolas	2e-14
2xrc_A	565	Human complement factor I; immune system, hydrolas	5e-06
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	9e-45
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	6e-16
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	1e-06
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	2e-44
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	1e-15
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	9e-09
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	2e-44
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	8e-16
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	1e-07
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	1e-43
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	2e-14
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	1e-07
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	1e-43
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	4e-18
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	9e-07
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	4e-43
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	4e-18
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	1e-05
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	4e-43
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	7e-18
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	9e-07
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	5e-43
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	2e-17
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	2e-06
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	6e-43
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	2e-14
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	3e-06
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	7e-43
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	2e-13
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	2e-06
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	8e-43
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	4e-15
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	1e-08
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	2e-42
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	8e-15
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	9e-09
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	3e-42
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	3e-15
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	9e-11
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	3e-42
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	2e-17
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	6e-08
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	7e-42
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	3e-15
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	2e-05
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	1e-41
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	3e-13
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	1e-05
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	1e-41
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	1e-15
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	4e-06
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	1e-41
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	1e-16
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	2e-41
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	7e-14
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	2e-06
1a7s_A	225	Heparin binding protein; serine protease homolog,	3e-41
1a7s_A	225	Heparin binding protein; serine protease homolog,	1e-12
1a7s_A	225	Heparin binding protein; serine protease homolog,	2e-06
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	3e-40
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	4e-13
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	1e-39
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	3e-14
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	3e-06
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	1e-39
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	4e-14
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	3e-07
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	1e-39
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	7e-14
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	7e-08
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	2e-39
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	8e-14
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	6e-06
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	2e-39
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	2e-15
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	7e-06
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	2e-39
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	8e-14
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	2e-39
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	2e-14
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	7e-08
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	3e-39
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	6e-14
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	2e-07
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	4e-39
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	7e-14
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	8e-07
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	6e-39
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	2e-14
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	6e-07
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	8e-39
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	3e-14
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	2e-06
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	1e-38
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	1e-13
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	6e-09
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	2e-38
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	1e-18
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	2e-38
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	5e-14
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	2e-06
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	2e-38
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	8e-13
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	6e-08
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	3e-38
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	3e-13
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	9e-08
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	3e-38
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	3e-13
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	2e-08
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	4e-38
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	2e-13
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	5e-08
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	1e-37
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	6e-13
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	5e-07
2aiq_A	231	Protein C activator; snake venom serine proteinase	2e-37
2aiq_A	231	Protein C activator; snake venom serine proteinase	5e-12
2aiq_A	231	Protein C activator; snake venom serine proteinase	9e-08
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	2e-37
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	5e-15
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	4e-37
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	8e-12
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	5e-08
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	3e-36
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	2e-13
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	7e-08
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	3e-36
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	1e-13
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	2e-07
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	4e-36
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	1e-14
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	6e-07
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	6e-36
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	1e-12
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	2e-06
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	9e-36
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	3e-12
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	2e-05
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	2e-35
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	1e-12
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	5e-05
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	3e-35
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	1e-14
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	1e-34
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	5e-13
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	5e-07
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	2e-34
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	3e-13
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	3e-04
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	3e-34
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	5e-13
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	9e-07
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	4e-34
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	3e-13
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	3e-07
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	2e-33
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	5e-12
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	5e-07
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	7e-33
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	7e-13
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	3e-07
3hrz_D	741	Complement factor B; serine protease, glycosilated	2e-30
3hrz_D	741	Complement factor B; serine protease, glycosilated	6e-11
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	2e-26
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	1e-07
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	2e-05
2pka_A	80	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	5e-22
2pka_A	80	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	3e-13
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	1e-11
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	2e-07
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	9e-10
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score =  188 bits (480), Expect = 2e-55
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A   ++PWQ+S+R   +S+  H CG ++ N+ W V AAHC++   P+ + L +G
Sbjct: 1   IVGGIEARPYEFPWQVSVR--RKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVG 58

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EHD S        Q   V  +  +  +DP T E D+++++    + F  N+ PIC P+  
Sbjct: 59  EHDSSAASTVR--QTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPA 116

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM-------ATCWNHFLGNRI 556
            ++V   +  +GWG +  G        PA  + +       A C   +  + I
Sbjct: 117 NDYVYRKSQCSGWGTINSG----GVCCPAVLRYVTLNITTNAFCDAVYTSDTI 165

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 2/49 (4%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG +A   ++PWQ+S+R   +S+  H CG ++ N+ W V AAHC++ 
Sbjct: 1   IVGGIEARPYEFPWQVSVR--RKSSDSHFCGGSIINDRWVVCAAHCMQG 47

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 639 PLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSF--DSC 687
             P+VL+ V++ +  N+ C+ +Y +    + I +  ICA    G    DSC
Sbjct: 138 CCPAVLRYVTLNITTNAFCDAVYTS----DTIYDDMICATDNTGMTDRDSC 184

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score =  188 bits (481), Expect = 2e-55
 Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 7/153 (4%)

Query: 381 CGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 437
           CG  +F    S+R+VGGE A    WPWQISL+    +T+ H CG  L   N  +TAAHC+
Sbjct: 1   CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60

Query: 438 EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF 497
            +       + LG+++L  E+E  G     V  +  H +++      D+AL++  E V+ 
Sbjct: 61  SN--TLTYRVALGKNNLEVEDEA-GSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVEL 117

Query: 498 QPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
              I   C+P + +         VTGWGRLY  
Sbjct: 118 GDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTN 150

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score = 92.7 bits (231), Expect = 3e-21
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 553 GNRILFP--SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
           G  I  P  S+R+VGGE A    WPWQISL+    +T+ H CG  L   N  +TAAHC+ 
Sbjct: 2   GAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCIS 61

Query: 611 D 611
           +
Sbjct: 62  N 62

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +GP+ + LQ+   PV++ + C            + E  +CAG   G   +C
Sbjct: 150 NGPIAAELQQGLQPVVDYATCSQRDWWGT---TVKETMVCAGG-DGVISAC 196

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score =  189 bits (481), Expect = 7e-54
 Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 380 VCGRR--LFPSSRIVGG-EKATFGKWPWQISLRQW----IRSTYLHKCGAALFNENWAVT 432
            CG R       +I G   +A +G++PW +++ +             CG +L   +  +T
Sbjct: 117 FCGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLT 176

Query: 433 AAHCVEDVP--PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLR 490
            AHCV         + +R GE D  TE+E   YQER+++ V  H  F+P+T   D+ALL 
Sbjct: 177 GAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLL 236

Query: 491 FYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEG 529
              P+    NI  IC+P+    F  T    +GWG+   G
Sbjct: 237 LDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFG 275

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score = 73.7 bits (181), Expect = 4e-14
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 559 PSSRIVGG-EKATFGKWPWQISLRQW----IRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
              +I G   +A +G++PW +++ +             CG +L   +  +T AHCV    
Sbjct: 126 LDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQ 185

Query: 614 S 614
           S
Sbjct: 186 S 186

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score = 62.2 bits (151), Expect = 2e-10
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 636 ADGPLPSVLQEVSVPVINNSLCETMYRAA--GFIEHIPEIFICAGWRKGSFDSC 687
           +     ++L+++ +P ++   C+   R    G    + + F+CAG  +G  D+C
Sbjct: 276 SRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQGK-DTC 328

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score =  178 bits (453), Expect = 1e-51
 Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 6/142 (4%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED---VPPSDLLL 447
           IVGG  AT G++P+Q+S ++       H CGA+++NEN+A+TA HCV       PS L +
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQI 60

Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
             GE D+S  E     Q   V  +  H  FD    + D++LL+    + F  N+ PI +P
Sbjct: 61  VAGELDMSVNEGS--EQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALP 118

Query: 508 EDDTNFVGTSAHVTGWGRLYEG 529
           E           VTGWG   EG
Sbjct: 119 EQGHTA-TGDVIVTGWGTTSEG 139

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 23/49 (46%), Positives = 34/49 (69%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG  AT G++P+Q+S ++       H CGA+++NEN+A+TA HCV  
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYG 49

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score = 64.5 bits (158), Expect = 9e-12
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G  P VLQ+V+VP++++  C   Y A      I +  ICAG  +G  DSC
Sbjct: 139 GGNTPDVLQKVTVPLVSDEDCRADYGADE----ILDSMICAGVPEGGKDSC 185

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score =  175 bits (446), Expect = 1e-50
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 7/142 (4%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++GG  A+ G++PWQ+S  Q    ++ H CGA+L +   A++A+HCV+ V P+++ +  G
Sbjct: 1   VIGGTNASPGEFPWQLSQ-QRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAG 59

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRT--FEYDLALLRFYEPVKFQPNIIPICVPE 508
               S      G Q   V     H  +   T  +  D+A+L     +    NI    +P 
Sbjct: 60  LWQQSDTS---GTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPA 116

Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
           ++ N   GT+  ++GWGR    
Sbjct: 117 NNNNDYAGTTCVISGWGRTDGT 138

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score = 82.7 bits (205), Expect = 7e-18
 Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           ++GG  A+ G++PWQ+S  Q    ++ H CGA+L +   A++A+HCV+ 
Sbjct: 1   VIGGTNASPGEFPWQLSQ-QRQSGSWSHSCGASLLSSTSALSASHCVDG 48

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
              LP +LQ+ S+PVI  + C       G    I +  IC     G+  +C
Sbjct: 138 TNNLPDILQKSSIPVITTAQCTAAMVGVGGAN-IWDNHICVQDPAGNTGAC 187

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score =  173 bits (442), Expect = 3e-50
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 8/142 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLR 448
           IVGG  A  G WPW + L    R      CGA+L + +W V+AAHCV    + PS     
Sbjct: 1   IVGGSDAKEGAWPWVVGLYYDDR----LLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAI 56

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           LG H  S    P     R +  +  +P ++ R  + D+A++     V +   I PI +PE
Sbjct: 57  LGLHMKSNLTSPQT-VPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPE 115

Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
           ++  F  G +  + GWG +   
Sbjct: 116 ENQVFPPGRNCSIAGWGTVVYQ 137

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score = 78.8 bits (195), Expect = 1e-16
 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG  A  G WPW + L    R      CGA+L + +W V+AAHCV  
Sbjct: 1   IVGGSDAKEGAWPWVVGLYYDDR----LLCGASLVSSDWLVSAAHCVYG 45

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G    +LQE  VP+++N  C+           I E  ICAG+ +G  DSC
Sbjct: 137 QGTTADILQEADVPLLSNERCQQQMPEYN----ITENMICAGYEEGGIDSC 183

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score =  179 bits (455), Expect = 4e-50
 Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 16/167 (9%)

Query: 379 EVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 438
             CG     S R+  G +      PW   LR          CG A+ +E + +TAAHCV 
Sbjct: 109 FDCGNF--LSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVH 166

Query: 439 DVPPSDLLLRLGEHDLSTEEEPY----------GYQERRVQIVASHPQFDPRTFEYDLAL 488
            +      +RLGEH +STEE+                  ++    H ++D R   +D+AL
Sbjct: 167 GLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIAL 226

Query: 489 LRFYEPVKFQPNIIPICVPEDDT----NFVGTSAHVTGWGRLYEGRF 531
           L+    V FQ +I PIC+P  D         ++  VTGWG    G  
Sbjct: 227 LKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSS 273

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score = 78.4 bits (193), Expect = 1e-15
 Identities = 30/133 (22%), Positives = 44/133 (33%), Gaps = 13/133 (9%)

Query: 490 RFYEPVKFQPNIIPICVPEDDTNFV-----GTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
           R  E    +       VP D  +++     G    V  +          S      + E 
Sbjct: 49  RTIEERLTEAQKAGQKVPADYASYLQKALCGEFNGVRHFCCPSANIQHNSKVMSLFKDEN 108

Query: 545 ATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVT 604
             C     GN     S R+  G +      PW   LR          CG A+ +E + +T
Sbjct: 109 FDC-----GNF---LSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILT 160

Query: 605 AAHCVEDLWSQII 617
           AAHCV  L + + 
Sbjct: 161 AAHCVHGLQNDLY 173

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score = 56.4 bits (136), Expect = 1e-08
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +G    VL + +VP+   S C   YR A     +P   +C G      DSC
Sbjct: 270 NGSSSDVLLQANVPLQPRSACSQAYRRA-----VPLSQLCVGGGDLQ-DSC 314

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score =  173 bits (442), Expect = 4e-50
 Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
           IVGG ++++G+WPWQ+SL Q   +   H CG +L    W +TAAHC + +P      +  
Sbjct: 1   IVGGTESSWGEWPWQVSL-QVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYS 59

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           G  +LS   +       +++ +  H  +      +D+AL++   P+++     PI +P  
Sbjct: 60  GILELSDITKDT--PFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSK 117

Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
                + T+  VTGWG   E 
Sbjct: 118 GDTSTIYTNCWVTGWGFSKEK 138

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score = 83.0 bits (206), Expect = 6e-18
 Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG ++++G+WPWQ+SL Q   +   H CG +L    W +TAAHC + 
Sbjct: 1   IVGGTESSWGEWPWQVSL-QVKLTAQRHLCGGSLIGHQWVLTAAHCFDG 48

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G + ++LQ+V++P++ N  C+  Y+       I +  +CAG+++G  D+C
Sbjct: 138 KGEIQNILQKVNIPLVTNEECQKRYQDY----KITQRMVCAGYKEGGKDAC 184

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score =  173 bits (442), Expect = 5e-50
 Identities = 59/146 (40%), Positives = 79/146 (54%), Gaps = 11/146 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP------PSD 444
           +VGG  A  G+WPWQ+SL         H CGA+L + NW V+AAHC  D        P+ 
Sbjct: 1   VVGGTDADEGEWPWQVSLHAL---GQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQ 57

Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
               LG HD S    P G QERR++ + SHP F+  TF+YD+ALL   +P ++   + PI
Sbjct: 58  WTAFLGLHDQSQRSAP-GVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPI 116

Query: 505 CVPEDDTNF-VGTSAHVTGWGRLYEG 529
            +P+    F  G +  VTGWG    G
Sbjct: 117 SLPDASHVFPAGKAIWVTGWGHTQYG 142

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG  A  G+WPWQ+SL         H CGA+L + NW V+AAHC  D
Sbjct: 1   VVGGTDADEGEWPWQVSLHAL---GQGHICGASLISPNWLVSAAHCYID 46

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score = 62.2 bits (152), Expect = 5e-11
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G    +LQ+  + VIN + CE +         I    +C G+  G  DSC
Sbjct: 142 GGTGALILQKGEIRVINQTTCENLLPQQ-----ITPRMMCVGFLSGGVDSC 187

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score =  172 bits (437), Expect = 3e-49
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 11/143 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L           CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGQECKDGECPWQALLINE---ENEGFCGGTILSEFYILTAAHCLYQ--AKRFKVRVG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           + +   EE         V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 56  DRNTEQEEGGE--AVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113

Query: 511 ----TNFVGTSAHVTGWGRLYEG 529
               T     +  V+G+GR +E 
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHEK 136

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score = 78.0 bits (193), Expect = 3e-16
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG++   G+ PWQ  L           CG  + +E + +TAAHC+  
Sbjct: 1   IVGGQECKDGECPWQALLINE---ENEGFCGGTILSEFYILTAAHCLYQ 46

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
            G   + L+ + VP ++ + C+           I +   CAG+     D+C+
Sbjct: 136 KGEQSTRLKMLEVPYVDRNSCKLSSSFI-----ITQNMFCAGYDTKQEDACQ 182

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score =  173 bits (440), Expect = 3e-49
 Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)

Query: 373 NMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVT 432
           ++ +  E      +   RIV G  A  G  PWQ+ L  + +S     CGA+L ++ W +T
Sbjct: 13  SLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLT 70

Query: 433 AAHCVEDVP------PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYD 485
           AAHC+   P       +DLL+R+G+H  +  E     +   ++ +  HP+++ R   + D
Sbjct: 71  AAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNI-EKISMLEKIYIHPRYNWRENLDRD 129

Query: 486 LALLRFYEPVKFQPNIIPICVPEDDTNF----VGTSAHVTGWGRLYEGRFRRSYG-HPAT 540
           +AL++  +PV F   I P+C+P+ +T       G    VTGWG L E          P+ 
Sbjct: 130 IALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV 189

Query: 541 RQE 543
            Q 
Sbjct: 190 LQV 192

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score = 84.7 bits (210), Expect = 3e-18
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +   RIV G  A  G  PWQ+ L  + +S     CGA+L ++ W +TAAHC+  
Sbjct: 26  YIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLTAAHCLLY 77

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)

Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRK---GSFDSCE 688
              PSVLQ V++P++   +C+   R       I +   CAG++       D+CE
Sbjct: 184 KGQPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACE 232

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score =  174 bits (443), Expect = 3e-49
 Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 28/240 (11%)

Query: 302 PPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTSTVSTTAFI 361
           P    N      TT          +     P    +T + S  S +   T +        
Sbjct: 5   PRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIW--- 61

Query: 362 DESNEIESQGINMSNYKEVCGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLH 418
               + E +G  +     VCG+ + P     RI+GG+KA  G +PWQ+            
Sbjct: 62  ----KNEQKGEKIPRCLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIH------G 111

Query: 419 KCGAALFNENWAVTAAHCV-----EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVAS 473
           + G AL  + W +TAAH +     E    + L + LG  ++    +        ++ V+ 
Sbjct: 112 RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKL---GNHPIRRVSV 168

Query: 474 HPQF---DPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
           HP +   +   FE D+ALL     V   PN++PIC+P++DT + +G   +V+G+G + E 
Sbjct: 169 HPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK 228

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score = 84.4 bits (209), Expect = 8e-18
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIP 618
              RI+GG+KA  G +PWQ+            + G AL  + W +TAAH +     +   
Sbjct: 86  QRQRIIGGQKAKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHEAQS 139

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
           +  +   L+ V +PV N   CE   R    ++   +   CAG      D+C+
Sbjct: 226 EEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQ 277

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score =  174 bits (444), Expect = 1e-48
 Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 23/202 (11%)

Query: 340 SMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLFP---SSRIVGGEK 396
            M   +          + TA     NE   +G  +     VCG+ + P     +I+GG+K
Sbjct: 106 KMQTRAGSRESEQGVYTCTAQGIWKNE--QKGEKIPRCLPVCGKPVNPVEQRQQIIGGQK 163

Query: 397 ATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV-----EDVPPSDLLLRLGE 451
           A  G +PWQ+            + G AL  + W +TAAH +     E    + L + LG 
Sbjct: 164 AKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGH 217

Query: 452 HDLSTEEEPYGYQERRVQIVASHPQF---DPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
            ++    +        ++ V+ HP +   +   FE D+ALL     V   PN++PIC+P+
Sbjct: 218 TNVEELMKL---GNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPD 274

Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
           +DT + +G   +V+G+G + E 
Sbjct: 275 NDTFYDLGLMGYVSGFGVMEEK 296

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 83.3 bits (206), Expect = 3e-17
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQ 615
              +I+GG+KA  G +PWQ+            + G AL  + W +TAAH +     +
Sbjct: 154 QRQQIIGGQKAKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHE 204

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 66.4 bits (162), Expect = 9e-12
 Identities = 13/51 (25%), Positives = 21/51 (41%)

Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
             +   L+ V +PV N   CE   R    ++   +   CAG      D+C+
Sbjct: 295 EKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQ 345

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score =  179 bits (456), Expect = 2e-48
 Identities = 54/197 (27%), Positives = 79/197 (40%), Gaps = 8/197 (4%)

Query: 336 YETSSMSPSSPKPS-PTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLFPSSRIVGG 394
              +S +    K     +S  S T  +     I    + +      C  +     RIVGG
Sbjct: 334 PAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNECTTK--IKPRIVGG 391

Query: 395 EKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHD 453
             +  G+WPWQ++L      T  H CG ++    W +TAAHC   V  P  L +  G  +
Sbjct: 392 TASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILN 450

Query: 454 LSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF 513
            S  +E        VQ +  H Q+      YD+ALL+    V +  +  PIC+P      
Sbjct: 451 QSEIKEDT--SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRN 508

Query: 514 -VGTSAHVTGWGRLYEG 529
            + T   VTGWG     
Sbjct: 509 VIYTDCWVTGWGYRKLR 525

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 88.8 bits (220), Expect = 2e-18
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 547 CWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAA 606
             ++    +      RIVGG  +  G+WPWQ++L      T  H CG ++    W +TAA
Sbjct: 375 KMDNECTTK---IKPRIVGGTASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAA 430

Query: 607 HCVEDLWS 614
           HC   + S
Sbjct: 431 HCFYGVES 438

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 62.2 bits (151), Expect = 4e-10
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
              + + LQ+  +P++ N  C+  YR       I    ICAG+R+G  D+C
Sbjct: 525 RDKIQNTLQKAKIPLVTNEECQKRYRG----HKITHKMICAGYREGGKDAC 571

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score =  170 bits (433), Expect = 2e-48
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 18/169 (10%)

Query: 379 EVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYL-HKCGAALFNENWAVTAAHCV 437
             CG ++  + +I+ G+     ++PW   +     S +    CG +L N  + VTAAHCV
Sbjct: 12  NDCGYQV-EADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCV 70

Query: 438 EDVPPSDLLL----RLGEHDLSTEEEPYG---------YQERRVQIVASHPQFDPRTFE- 483
                  +      RLGE + +T+ + YG           +  ++    HP +   + + 
Sbjct: 71  AGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDR 130

Query: 484 -YDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGR 530
            +D+AL+R    V+F   I P+C+P+ +    VG    V GWGR   G+
Sbjct: 131 YHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQ 179

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYL-HKCGAALFNENWAVTAAHCVEDLWSQII 617
            + +I+ G+     ++PW   +     S +    CG +L N  + VTAAHCV     +++
Sbjct: 19  EADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVV 78

Query: 618 PIIQNCRRRESNL 630
             +   R  E N 
Sbjct: 79  GALNKVRLGEWNT 91

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
               G   ++ Q+++VPV++   C   + AAG    +    +CAG  K   DSC
Sbjct: 174 RTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGV--RVRSSQLCAGGEKAK-DSC 224

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score =  169 bits (431), Expect = 2e-48
 Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 11/144 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
           IVGG+    G+ PWQ+ L           CG  L N  W V+AAHC + +    +L+  L
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGA----QLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVL 56

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE- 508
           GEHDLS  +     Q RRV  V     + P T  +D+ALLR ++PV    +++P+C+PE 
Sbjct: 57  GEHDLSEHDGDE--QSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPER 114

Query: 509 ---DDTNFVGTSAHVTGWGRLYEG 529
              + T      + V+GWG+L + 
Sbjct: 115 TFSERTLAFVRFSLVSGWGQLLDR 138

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score = 77.7 bits (192), Expect = 5e-16
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
           IVGG+    G+ PWQ+ L           CG  L N  W V+AAHC + + +
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGA----QLCGGTLINTIWVVSAAHCFDKIKN 48

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 17/51 (33%), Positives = 22/51 (43%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G     L  ++VP +    C    R  G   +I E   CAG+  GS DSC
Sbjct: 138 RGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSC 188

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score =  168 bits (427), Expect = 6e-48
 Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 9/142 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLR 448
           IVGG++A   KWPWQ+SL +     ++H CG +L +  W +TAAHCV       + L ++
Sbjct: 1   IVGGQEAPRSKWPWQVSL-RVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQ 59

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           L E  L  ++     Q   V  +  HPQF       D+ALL   EPV     +  + +P 
Sbjct: 60  LREQHLYYQD-----QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPP 114

Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
               F  G    VTGWG +   
Sbjct: 115 ASETFPPGMPCWVTGWGDVDND 136

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score = 83.5 bits (207), Expect = 4e-18
 Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG++A   KWPWQ+SL +     ++H CG +L +  W +TAAHCV  
Sbjct: 1   IVGGQEAPRSKWPWQVSL-RVRDRYWMHFCGGSLIHPQWVLTAAHCVGP 48

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)

Query: 637 DGPLPS--VLQEVSVPVINNSLCETMYRAAGFIEH----IPEIFICAGWRKGSFDSC 687
           D PLP    L++V VP++ N +C+  Y    +       I +  +CAG      DSC
Sbjct: 136 DEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAG--NSQRDSC 190

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score =  172 bits (437), Expect = 7e-48
 Identities = 51/170 (30%), Positives = 73/170 (42%), Gaps = 17/170 (10%)

Query: 369 SQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNEN 428
            +G  ++   + CGRR  P  RIVGG   + G+WPWQ+SLR        H CG +L + +
Sbjct: 96  PRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGA----HLCGGSLLSGD 151

Query: 429 WAVTAAHCVED--VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP------R 480
           W +TAAHC  +     S   +  G    ++        +  VQ V  H  + P       
Sbjct: 152 WVLTAAHCFPERNRVLSRWRVFAGAVAQASPHG----LQLGVQAVVYHGGYLPFRDPNSE 207

Query: 481 TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFV-GTSAHVTGWGRLYEG 529
               D+AL+    P+     I P+C+P      V G    VTGWG     
Sbjct: 208 ENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYY 257

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score = 82.5 bits (204), Expect = 5e-17
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 4/54 (7%)

Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            P  RIVGG   + G+WPWQ+SLR        H CG +L + +W +TAAHC  +
Sbjct: 113 LPVDRIVGGRDTSLGRWPWQVSLRYDGA----HLCGGSLLSGDWVLTAAHCFPE 162

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score = 60.5 bits (147), Expect = 6e-10
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G    VLQE  VP+I+N +C            I     CAG+ +G  D+C
Sbjct: 257 YGQQAGVLQEARVPIISNDVCNGADFYGN---QIKPKMFCAGYPEGGIDAC 304

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score =  166 bits (424), Expect = 1e-47
 Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 5/141 (3%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V  P  L +  
Sbjct: 1   IVGGTASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           G  + S  +E        VQ +  H Q+      YD+ALL+    V +  +  PI +P  
Sbjct: 60  GILNQSEIKEDT--SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSK 117

Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
                + T   VTGWG     
Sbjct: 118 GERNVIYTDCWVTGWGYRKLR 138

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score = 80.7 bits (200), Expect = 3e-17
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   + S
Sbjct: 1   IVGGTASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAAHCFYGVES 51

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
              + + LQ+  +P++ N  C+  YR       I    ICAG+R+G  D+C
Sbjct: 138 RDKIQNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDAC 184

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score =  166 bits (422), Expect = 3e-47
 Identities = 50/155 (32%), Positives = 67/155 (43%), Gaps = 20/155 (12%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED----------- 439
           I  G  A  G  PW   L           CG +L   +W VTAAHC+             
Sbjct: 1   IFNGRPAQKGTTPWIAMLSHL---NGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRD 57

Query: 440 ---VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK 496
              + PSD  + LG+H     +E    Q   V+    HPQ+DP TFE D+AL+   E   
Sbjct: 58  SDLLSPSDFKIILGKHWRLRSDENE--QHLGVKHTTLHPQYDPNTFENDVALVELLESPV 115

Query: 497 FQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRF 531
               ++PIC+PE      G    V+GWG+ +  RF
Sbjct: 116 LNAFVMPICLPEGPQQ-EGAMVIVSGWGKQFLQRF 149

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score = 79.6 bits (197), Expect = 7e-17
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           I  G  A  G  PW   L           CG +L   +W VTAAHC+        P +++
Sbjct: 1   IFNGRPAQKGTTPWIAMLSHL---NGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRD 57

Query: 623 CRRRESNLWK 632
                 + +K
Sbjct: 58  SDLLSPSDFK 67

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
                  P  L E+ +P++++S C+  Y        +    ICAG ++G  D+C 
Sbjct: 143 KQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKK--VTRDMICAGEKEGGKDACA 195

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score =  166 bits (423), Expect = 4e-47
 Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 15/165 (9%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP------PSD 444
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+   P       +D
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58

Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
           LL+R+G+H  +  E     +   ++ +  HP+++ R   + D+AL++  +PV F   I P
Sbjct: 59  LLVRIGKHSRTRYERNI-EKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117

Query: 504 ICVPEDDTNFV----GTSAHVTGWGRLYEGRFRRSYG-HPATRQE 543
           +C+P+ +T       G    VTGWG L E          P+  Q 
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQV 162

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score = 79.7 bits (197), Expect = 1e-16
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IV G  A  G  PWQ+ L +  +S     CGA+L ++ W +TAAHC+  
Sbjct: 1   IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLY 47

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)

Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRK---GSFDSCE 688
              PSVLQ V++P++   +C+   R       I +   CAG++       D+CE
Sbjct: 154 KGQPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACE 202

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score =  165 bits (421), Expect = 5e-47
 Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 14/155 (9%)

Query: 381 CGRRLFP-----SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 435
           CG           SRIV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAH
Sbjct: 1   CGVPAIQPVLSGLSRIVNGEEAVPGSWPWQVSLQ---DKTGFHFCGGSLINENWVVTAAH 57

Query: 436 CVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 495
           C      +  ++  GE D  +  E    Q+ ++  V  + +++  T   D+ LL+     
Sbjct: 58  CGV---TTSDVVVAGEFDQGSSSEKI--QKLKIAKVFKNSKYNSLTINNDITLLKLSTAA 112

Query: 496 KFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
            F   +  +C+P    +F  GT+   TGWG     
Sbjct: 113 SFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYT 147

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 3/53 (5%)

Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
             SRIV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAHC   
Sbjct: 12  GLSRIVNGEEAVPGSWPWQVSLQ---DKTGFHFCGGSLINENWVVTAAHCGVT 61

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score = 53.4 bits (129), Expect = 6e-08
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 7/51 (13%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +   P  LQ+ S+P+++N+ C+  +        I +  ICAG       SC
Sbjct: 148 NANTPDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSC 191

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score =  169 bits (431), Expect = 8e-47
 Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 17/159 (10%)

Query: 380 VCGRRLFP-SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 438
           VCG        +I GG+KA  G +PWQ+ +              AL  +NW +TAAH V 
Sbjct: 150 VCGLSARTTGGQIYGGQKAKPGDFPWQVLILGG------TTAAGALLYDNWVLTAAHAVY 203

Query: 439 D--VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRT-FEYDLALLRFYEPV 495
           +     S L +R+G     +        +   + V  H  +     F+ D+AL++    V
Sbjct: 204 EQKHDASALDIRMGTLKRLSPHY----TQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKV 259

Query: 496 KFQPNIIPICVPEDDTNFV---GTSAHVTGWGRLYEGRF 531
               NI PIC+P  +             +GWG    G  
Sbjct: 260 VINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFL 298

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 82.1 bits (203), Expect = 8e-17
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)

Query: 553 GNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           G        +I GG+KA  G +PWQ+ +              AL  +NW +TAAH V +
Sbjct: 152 GLSARTTGGQIYGGQKAKPGDFPWQVLILGG------TTAAGALLYDNWVLTAAHAVYE 204

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 62.9 bits (153), Expect = 1e-10
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 635 LADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEH-IPEIFICAGWRKGSFDSCE 688
              G L   L  V +P++++  C   Y    +    +    +CAG   G  DSC 
Sbjct: 293 TQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCR 347

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score =  165 bits (419), Expect = 8e-47
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 20/178 (11%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++ G+    G  PWQ+ L     S     CGA L + +W +TAAHC+++     LL+RLG
Sbjct: 1   LIDGKMTRRGDSPWQVVLL---DSKKKLACGAVLIHPSWVLTAAHCMDE--SKKLLVRLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE-- 508
           E+DL   E+     +  ++ V  HP +   T + D+ALL   +P      I+PIC+P+  
Sbjct: 56  EYDLRRWEKWE--LDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSG 113

Query: 509 ---DDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQE-------MATCWNHFLGNRI 556
               + N  G    VTGWG                             C +  + N +
Sbjct: 114 LAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNEC-SEVMSNMV 170

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           ++ G+    G  PWQ+ L     S     CGA L + +W +TAAHC+++
Sbjct: 1   LIDGKMTRRGDSPWQVVLL---DSKKKLACGAVLIHPSWVLTAAHCMDE 46

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 5/53 (9%)

Query: 636 ADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
           A      VL  + +PV+ ++ C  +         + E  +CAG      D+CE
Sbjct: 141 AKRNRTFVLNFIKIPVVPHNECSEVMSNM-----VSENMLCAGILGDRQDACE 188

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score =  163 bits (414), Expect = 4e-46
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 18/148 (12%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED-----VPPSDL 445
           I+GG+KA  G +PWQ+            + G AL  + W +TAAH +          + L
Sbjct: 1   IIGGQKAKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHEAQSNASL 54

Query: 446 LLRLGEHDLSTEEEPYGYQERRVQIVASHPQF---DPRTFEYDLALLRFYEPVKFQPNII 502
            + LG  ++    +        ++ V+ HP +   +   FE D+ALL     V   PN++
Sbjct: 55  DVFLGHTNVEELMKL---GNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLL 111

Query: 503 PICVPEDDTNF-VGTSAHVTGWGRLYEG 529
           PIC+P++DT + +G   +V+G+G + E 
Sbjct: 112 PICLPDNDTFYDLGLMGYVSGFGVMEEK 139

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score = 79.6 bits (197), Expect = 8e-17
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIP 618
           I+GG+KA  G +PWQ+            + G AL  + W +TAAH +     +   
Sbjct: 1   IIGGQKAKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHEAQS 50

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score = 68.1 bits (167), Expect = 7e-13
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
           +  +   L+ V +PV N   CE   R    ++   +   CAG      D+C+
Sbjct: 137 EEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQ 188

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score =  161 bits (411), Expect = 7e-46
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 12/141 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
           IVGG +   G+WPWQ SL+        H+CGA L N  W V+AAHC      P+      
Sbjct: 1   IVGGTEVEEGEWPWQASLQWDGS----HRCGATLINATWLVSAAHCFTTYKNPARWTASF 56

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           G     ++       +R ++ +  H ++   + +YD++L     PV +   +  +C+P+ 
Sbjct: 57  GVTIKPSK------MKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDA 110

Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
              F  G    VTG+G L   
Sbjct: 111 SYEFQPGDVMFVTGFGALKND 131

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score = 76.8 bits (190), Expect = 6e-16
 Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG +   G+WPWQ SL+        H+CGA L N  W V+AAHC   
Sbjct: 1   IVGGTEVEEGEWPWQASLQWDGS----HRCGATLINATWLVSAAHCFTT 45

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score = 61.8 bits (151), Expect = 7e-11
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           DG   + L++  V +I+ + C            I    +CAG  +G  D+C
Sbjct: 131 DGYSQNHLRQAQVTLIDATTCNEPQAYND---AITPRMLCAGSLEGKTDAC 178

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score =  167 bits (425), Expect = 9e-46
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 14/179 (7%)

Query: 373 NMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVT 432
           ++ +  E      +   RIV G  A  G  PWQ+ L  + +S     CGA+L ++ W +T
Sbjct: 148 SLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLT 205

Query: 433 AAHCVEDVP------PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYD 485
           AAHC+   P       +DLL+R+G+H  +  E     +   ++ +  HP+++ R   + D
Sbjct: 206 AAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNI-EKISMLEKIYIHPRYNWRENLDRD 264

Query: 486 LALLRFYEPVKFQPNIIPICVPEDDTNF----VGTSAHVTGWGRLYEGRFRRSYGHPAT 540
           +AL++  +PV F   I P+C+P+ +T       G    VTGWG L E           +
Sbjct: 265 IALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS 323

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 81.4 bits (201), Expect = 1e-16
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +   RIV G  A  G  PWQ+ L  + +S     CGA+L ++ W +TAAHC+  
Sbjct: 161 YIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLTAAHCLLY 212

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 55.6 bits (134), Expect = 3e-08
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)

Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRK---GSFDSCE 688
              PSVLQ V++P++   +C+   R       I +   CAG++       D+CE
Sbjct: 319 KGQPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACE 367

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score =  161 bits (409), Expect = 2e-45
 Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 16/147 (10%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLR 448
           I GG+KA  G +PWQ+ +              AL  +NW +TAAH V +     S L +R
Sbjct: 1   IYGGQKAKPGDFPWQVLILGG------TTAAGALLYDNWVLTAAHAVYEQKHDASALDIR 54

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRT-FEYDLALLRFYEPVKFQPNIIPICVP 507
           +G     +        +   + V  H  +     F+ D+AL++    V    NI PIC+P
Sbjct: 55  MGTLKRLSPHY----TQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLP 110

Query: 508 EDDTNFV---GTSAHVTGWGRLYEGRF 531
             +             +GWG    G  
Sbjct: 111 RKEAESFMRTDDIGTASGWGLTQRGFL 137

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score = 77.3 bits (191), Expect = 5e-16
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           I GG+KA  G +PWQ+ +              AL  +NW +TAAH V +
Sbjct: 1   IYGGQKAKPGDFPWQVLILGG------TTAAGALLYDNWVLTAAHAVYE 43

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score = 66.1 bits (162), Expect = 3e-12
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEH-IPEIFICAGWRKGSFDSC 687
               G L   L  V +P++++  C   Y    +    +    +CAG   G  DSC
Sbjct: 131 LTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC 185

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score =  160 bits (406), Expect = 3e-45
 Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 18/140 (12%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
           +VGG +A  G++P+ + L           CG AL+ ++  +TAAHCV      + +    
Sbjct: 1   VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSGSGNNTSITATG 52

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           G  DL +        + R   V   P F   T+  D AL++  +P+       P      
Sbjct: 53  GVVDLQSSSA----VKVRSTKVLQAPGFTKETYGKDWALIKLAQPINQ-----PTLKIAT 103

Query: 510 DTNFVGTSAHVTGWGRLYEG 529
            T +   +  V GWG   EG
Sbjct: 104 TTAYNQGTFTVAGWGANREG 123

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score = 76.8 bits (190), Expect = 4e-16
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 8/52 (15%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
           +VGG +A  G++P+ + L           CG AL+ ++  +TAAHCV    +
Sbjct: 1   VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSGSGN 44

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score = 61.4 bits (150), Expect = 9e-11
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G     L + +VP ++++ C +          +    ICAG+     D+C
Sbjct: 123 GGSQQRYLLKANVPFVSDAACRSSSSFIL----VANEMICAGYDTKQEDTC 169

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score =  160 bits (407), Expect = 4e-45
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 13/144 (9%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A  G++PWQ+ L           CG ++ NE W VTAAHCVE      + +  G
Sbjct: 1   VVGGEDAKPGQFPWQVVLN----GKVDAFCGGSIVNEKWIVTAAHCVET--GVKITVVAG 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP--RTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           EH++   E     Q+R V  +  H  F+    T+ +D+ALL   EP+     + PIC+ +
Sbjct: 55  EHNIEETEHT--EQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIAD 112

Query: 509 DDTN---FVGTSAHVTGWGRLYEG 529
            +         S +V+GWGR++  
Sbjct: 113 KEYTNIFLKFGSGYVSGWGRVFHK 136

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 4/49 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGGE A  G++PWQ+ L           CG ++ NE W VTAAHCVE 
Sbjct: 1   VVGGEDAKPGQFPWQVVLN----GKVDAFCGGSIVNEKWIVTAAHCVET 45

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score = 58.7 bits (143), Expect = 9e-10
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
            G    VLQ + VP+++ + C    +       I     CAG+ +G  DSC+
Sbjct: 136 KGRSALVLQYLRVPLVDRATCLRSTKFT-----ITNNMFCAGFHEGGRDSCQ 182

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score =  163 bits (414), Expect = 4e-45
 Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 23/165 (13%)

Query: 380 VCGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 436
           VCG    P     RI+GG  A    +PWQ+              G AL NE W +TAAH 
Sbjct: 69  VCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDN-------PWAGGALINEYWVLTAAHV 121

Query: 437 VEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD-------PRTFEYDLALL 489
           VE     +  + +G   + T       +    + V  HP +           F+ D+AL+
Sbjct: 122 VEG--NREPTMYVGSTSVQTSRLAKS-KMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALV 178

Query: 490 RFYEPVKFQPNIIPICVPEDDTNFV---GTSAHVTGWGRLYEGRF 531
           R  +PVK  P + PIC+P   +++    G    ++GWGR  +   
Sbjct: 179 RLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDR 223

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score = 81.0 bits (200), Expect = 1e-16
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 7/53 (13%)

Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
              RI+GG  A    +PWQ+              G AL NE W +TAAH VE 
Sbjct: 79  EKQRIIGGSDADIKNFPWQVFFDN-------PWAGGALINEYWVLTAAHVVEG 124

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score = 53.6 bits (129), Expect = 9e-08
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 5/58 (8%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIF----ICAGWRKGSFDSC 687
                     L+   +PV     C+ +       +    +F    ICAG  KG  DSC
Sbjct: 217 RTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEKGM-DSC 273

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score =  168 bits (426), Expect = 7e-45
 Identities = 49/233 (21%), Positives = 79/233 (33%), Gaps = 25/233 (10%)

Query: 341 MSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLF---PSSRIVGGEKA 397
                      +     T  +    + E + I     K  CG +        RIVGG++A
Sbjct: 269 GEDEVGCAGFASVAQEETEILTADMDAERRRIKSLLPKLSCGVKNRMHIRRKRIVGGKRA 328

Query: 398 TFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTE 457
             G  PWQ++++          CG       W +TAAHC+         +     D    
Sbjct: 329 QLGDLPWQVAIKDASG----ITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHP 384

Query: 458 EEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF----QPNIIPICVPEDDTNF 513
           +         V  +  H  ++  T++ D+AL+   +         P  IP CVP     F
Sbjct: 385 DLK-RIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLF 443

Query: 514 -VGTSAHVTGWGRLYEGRFRRSYGHPATRQE-----MATCWNHFLGNRILFPS 560
               +  V+GWGR  +           + Q      ++ C + F GNR     
Sbjct: 444 QPNDTCIVSGWGREKDN------ERVFSLQWGEVKLISNC-SKFYGNRFYEKE 489

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score = 75.3 bits (185), Expect = 2e-14
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 552 LGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           + NR+     RIVGG++A  G  PWQ++++          CG       W +TAAHC+  
Sbjct: 311 VKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASG----ITCGGIYIGGCWILTAAHCLRA 366

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score = 48.8 bits (116), Expect = 5e-06
 Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 6/54 (11%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
              D      LQ   V +I+N  C   Y          +   CAG   GS D+C
Sbjct: 456 REKDNERVFSLQWGEVKLISN--CSKFYGNR----FYEKEMECAGTYDGSIDAC 503

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score =  158 bits (403), Expect = 9e-45
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 10/140 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRL 449
           IVGG+ A  GK+P+Q+SLR     +  H+CGA++ + N  +TAAHCV+ +   + L + +
Sbjct: 1   IVGGKDAPVGKYPYQVSLR----LSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHV 56

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           G + LS            V+    +  +D      D+AL+    P+KF   + PI +  +
Sbjct: 57  GTNYLSESG-----DVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTN 111

Query: 510 DTNFVGTSAHVTGWGRLYEG 529
           D +       +TGWG    G
Sbjct: 112 DEDLESNPCTLTGWGSTRLG 131

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score = 76.4 bits (189), Expect = 6e-16
 Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 4/50 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL 612
           IVGG+ A  GK+P+Q+SLR     +  H+CGA++ + N  +TAAHCV+ L
Sbjct: 1   IVGGKDAPVGKYPYQVSLR----LSGSHRCGASILDNNNVLTAAHCVDGL 46

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 7/51 (13%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G  P+ LQE+ + V     CE           + +  IC   ++G   +C
Sbjct: 131 GGNTPNALQEIELIVHPQKQCERDQWR------VIDSHICTLTKRGE-GAC 174

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score =  160 bits (406), Expect = 2e-44
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 8/147 (5%)

Query: 391 IVGGEKATFGKWPWQISLR--QWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLL 447
           I+GG+ A  G WPW +SL+   +  +   H CG +L N  W +TAAHC       +D  L
Sbjct: 1   IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRL 60

Query: 448 RLGEHDLSTEEE---PYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
             G  ++            QER V+ +  H ++   +   D+AL++   PV     I P 
Sbjct: 61  IFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPG 120

Query: 505 CVPEDDTNFV--GTSAHVTGWGRLYEG 529
           C+P+          +  V GWG L E 
Sbjct: 121 CLPQFRAGPPRVPQTCWVAGWGFLQEN 147

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 563 IVGGEKATFGKWPWQISLR--QWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           I+GG+ A  G WPW +SL+   +  +   H CG +L N  W +TAAHC   
Sbjct: 1   IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRI 51

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score = 56.2 bits (136), Expect = 9e-09
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 637 DGPLPS-VLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +    S +LQE  V +I+  LC +     G    I    +CAG+ +G  D+C
Sbjct: 147 NARRTSPMLQEARVDLIDLGLCNSTRWYNG---RIRSTNVCAGYPEGKIDTC 195

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score =  158 bits (402), Expect = 2e-44
 Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 394 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHD 453
           GE A    W WQ+SL+      + H CG +L   +W VTA HC+         + LGE+D
Sbjct: 2   GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST--SRTYQVVLGEYD 59

Query: 454 LSTEEEPYGYQERRVQIVASHPQFDPRTFE--YDLALLRFYEPVKFQPNIIPICVPEDDT 511
            S  E            +  HP ++        D+AL++     +    +    +P    
Sbjct: 60  RSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGD 119

Query: 512 NF-VGTSAHVTGWGRLYEG 529
                   +++GWGRLY G
Sbjct: 120 ILPNEAPCYISGWGRLYTG 138

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score = 76.5 bits (189), Expect = 8e-16
 Identities = 18/46 (39%), Positives = 24/46 (52%)

Query: 566 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           GE A    W WQ+SL+      + H CG +L   +W VTA HC+  
Sbjct: 2   GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST 47

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            GPLP  LQ+  +P ++   C            + +  +CAG    +   C
Sbjct: 138 GGPLPDKLQQALLPTVDYEHCSQWDWWGIT---VKKTMVCAG--GDTRSGC 183

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score =  155 bits (395), Expect = 1e-43
 Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 7/139 (5%)

Query: 393 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEH 452
           GGEK    + PW +++R +        CG A+ ++ + +TAAHCV D  P  ++++    
Sbjct: 2   GGEKTDIKQVPWTVAVRTYPGEES-LTCGGAILSQWFVLTAAHCVFDQKPETIVIQYEST 60

Query: 453 DLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF-QPNIIPICVPEDDT 511
           +L  +      +            +   T E D+A+L    P+K       P  +P+ + 
Sbjct: 61  NLWEDPG----KSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEF 116

Query: 512 NF-VGTSAHVTGWGRLYEG 529
               G+   V+G+G     
Sbjct: 117 RPKTGSDVLVSGYGDGQTM 135

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 565 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL 612
           GGEK    + PW +++R +        CG A+ ++ + +TAAHCV D 
Sbjct: 2   GGEKTDIKQVPWTVAVRTYPGEES-LTCGGAILSQWFVLTAAHCVFDQ 48

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 9/51 (17%), Positives = 14/51 (27%), Gaps = 6/51 (11%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
             P    L+   + V++   C T Y        +     CA   K      
Sbjct: 135 MDPKDHDLKSAQLTVVDLDECRTKYGPIF----LSLQVFCAQ--KVGVSLE 179

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score =  155 bits (395), Expect = 1e-43
 Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 7/142 (4%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG  A    WPWQISL+    S+Y H CG +L  + W +TAAHCV+        + LG
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS--ARTWRVVLG 58

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFE--YDLALLRFYEPVKFQPNIIPICVPE 508
           EH+L+T E     Q   V  V  H  ++       YD+ALLR          +    +P 
Sbjct: 59  EHNLNTNEGK--EQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPP 116

Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
            +         ++TGWG+   G
Sbjct: 117 SNQILPNNNPCYITGWGKTSTG 138

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score = 83.4 bits (207), Expect = 4e-18
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG  A    WPWQISL+    S+Y H CG +L  + W +TAAHCV+ 
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS 49

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score = 49.5 bits (119), Expect = 9e-07
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            GPL   L++  +P ++++ C +          +    +CAG   G+   C
Sbjct: 138 GGPLSDSLKQAWLPSVDHATCSSSGWWGST---VKTTMVCAG--GGANSGC 183

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score =  155 bits (393), Expect = 4e-43
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 7/142 (4%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+        + +G
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR--ELTFRVVVG 58

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFE--YDLALLRFYEPVKFQPNIIPICVPE 508
           EH+L+        Q   VQ +  HP ++       YD+ALLR  + V     +    +P 
Sbjct: 59  EHNLNQNNGT--EQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPR 116

Query: 509 DDTNFV-GTSAHVTGWGRLYEG 529
             T     +  ++TGWG     
Sbjct: 117 AGTILANNSPCYITGWGLTRTN 138

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score = 82.6 bits (205), Expect = 7e-18
 Identities = 23/49 (46%), Positives = 31/49 (63%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+ 
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR 49

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score = 49.9 bits (120), Expect = 9e-07
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +G L   LQ+  +P ++ ++C +          +    +CAG   G    C
Sbjct: 138 NGQLAQTLQQAYLPTVDYAICSSSSYWGST---VKNSMVCAGG-DGVRSGC 184

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score =  154 bits (392), Expect = 5e-43
 Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 7/142 (4%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A    WPWQ+SL+      + H CG  L +++W +TAAHC+         + LG
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS--SRTYRVVLG 58

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTF--EYDLALLRFYEPVKFQPNIIPICVPE 508
            H LST E        +V  +  H  ++        D+ALL+   PV     I   C+P 
Sbjct: 59  RHSLSTNEPG--SLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPA 116

Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
             T        +VTGWGRL   
Sbjct: 117 AGTILPNNYVCYVTGWGRLQTN 138

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 21/49 (42%), Positives = 30/49 (61%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGGE A    WPWQ+SL+      + H CG  L +++W +TAAHC+  
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS 49

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +G  P +LQ+  + V++ + C            +    ICAG   G   SC
Sbjct: 138 NGASPDILQQGQLLVVDYATCSKPGWWGST---VKTNMICAGG-DGIISSC 184

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score =  154 bits (391), Expect = 6e-43
 Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 7/146 (4%)

Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLR 448
            I+GG++ +    P+  S++        H CG  L +  W +TAAHC           + 
Sbjct: 2   EIIGGKEVSPHSRPFMASIQYGGH----HVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVV 57

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           LG H LS  E     Q   ++      +        D+ L++     K   ++  + +  
Sbjct: 58  LGAHSLSKNEASK--QTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRS 115

Query: 509 DDTNFVGTSAHVTGWGRLYEGRFRRS 534
             +   GT   VTGWG       R S
Sbjct: 116 KTSLRSGTKCKVTGWGATDPDSLRPS 141

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score = 72.6 bits (179), Expect = 2e-14
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            I+GG++ +    P+  S++        H CG  L +  W +TAAHC   
Sbjct: 2   EIIGGKEVSPHSRPFMASIQYGGH----HVCGGVLIDPQWVLTAAHCQYR 47

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score = 48.3 bits (116), Expect = 3e-06
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
                  L+EV+V V++  LC +          I +  +CAG  KG  DSC
Sbjct: 137 SLRPSDTLREVTVTVLSRKLCNSQS-YYNGDPFITKDMVCAGDAKGQKDSC 186

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score =  153 bits (389), Expect = 7e-43
 Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 7/140 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+  S++        H CG  L  E W ++AAHC+ED     + + LG
Sbjct: 1   ILGGREAEAHARPYMASVQLNGA----HLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H LS  E     +   V     HP   P T ++DL LL+  E     P + P+     D
Sbjct: 57  AHSLSQPEP--SKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVD 114

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
            +   GT   V GWG +   
Sbjct: 115 RDVAPGTLCDVAGWGIVNHA 134

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score = 69.1 bits (170), Expect = 2e-13
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           I+GG +A     P+  S++        H CG  L  E W ++AAHC+ED
Sbjct: 1   ILGGREAEAHARPYMASVQLNGA----HLCGGVLVAEQWVLSAAHCLED 45

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G  P  LQ V +PV++ + C       G    I E  +CA       DSC
Sbjct: 134 AGRRPDSLQHVLLPVLDRATCNRRTHHDG---AITERLMCAE--SNRRDSC 179

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score =  153 bits (389), Expect = 8e-43
 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 12/140 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG  A+ G +P+ +S+    R+     CG +L N N  +TAAHCV     S   +R G
Sbjct: 1   IVGGTSASAGDFPFIVSIS---RNGG-PWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
               ++           +  V  HP +       DLA+L+    +    NI    +    
Sbjct: 57  SLSRTSGG-----ITSSLSSVRVHPSYS--GNNNDLAILKLSTSIPSGGNIGYARLAASG 109

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
           ++   G+SA V GWG   EG
Sbjct: 110 SDPVAGSSATVAGWGATSEG 129

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score = 74.1 bits (183), Expect = 4e-15
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL 612
           IVGG  A+ G +P+ +S+    R+     CG +L N N  +TAAHCV   
Sbjct: 1   IVGGTSASAGDFPFIVSIS---RNGG-PWCGGSLLNANTVLTAAHCVSGY 46

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score = 55.2 bits (134), Expect = 1e-08
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
              P  L +V+VP+++ + C   Y  +     I     CAG   G  DSC
Sbjct: 131 SSTPVNLLKVTVPIVSRATCRAQYGTSA----ITNQMFCAGVSSGGKDSC 176

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score =  153 bits (389), Expect = 2e-42
 Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 8/141 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
           I GG  A  G+WPWQ+S+         H CG +L +E W ++AAHC           ++L
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGV----HVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKL 56

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           G H L +  E    +   ++ +  HP +     + D+ALL+   P+ F   I PI +P  
Sbjct: 57  GAHQLDSYSEDA--KVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAA 114

Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
             +F  G    VTGWG +   
Sbjct: 115 QASFPNGLHCTVTGWGHVAPS 135

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score = 73.9 bits (182), Expect = 8e-15
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           I GG  A  G+WPWQ+S+         H CG +L +E W ++AAHC   
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGV----HVCGGSLVSEQWVLSAAHCFPS 45

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score = 56.1 bits (136), Expect = 9e-09
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 639 PLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEI---FICAGWRKGSFDSC 687
             P  LQ++ VP+I+   C ++Y      E    +    +CAG+ +G  D+C
Sbjct: 139 LTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDAC 190

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score =  152 bits (386), Expect = 3e-42
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 12/141 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG+K+   K PW + +           CG ++   N+ +TAA CV+   PSD+ +  G
Sbjct: 1   IIGGKKSDITKEPWAVGVL---VDEK-PFCGGSILTANFVITAAQCVDGTKPSDISIHYG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF-QPNIIPICVPED 509
               +T+           + +    ++ P T + + A++    P+K        I +P  
Sbjct: 57  SSYRTTKG-----TSVMAKKI-YIVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSL 110

Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
             +    TS  V+GWG     
Sbjct: 111 LYDPEPDTSVLVSGWGSTNFK 131

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score = 74.9 bits (185), Expect = 3e-15
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL 612
           I+GG+K+   K PW + +           CG ++   N+ +TAA CV+  
Sbjct: 1   IIGGKKSDITKEPWAVGVL---VDEK-PFCGGSILTANFVITAAQCVDGT 46

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score = 61.4 bits (150), Expect = 9e-11
 Identities = 10/51 (19%), Positives = 17/51 (33%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
                  L E +  V++   CE  Y+     ++I +   CAG         
Sbjct: 132 SLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIG 182

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score =  152 bits (387), Expect = 3e-42
 Identities = 50/155 (32%), Positives = 65/155 (41%), Gaps = 17/155 (10%)

Query: 381 CGRRLFP----SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 436
           CG+          R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC
Sbjct: 4   CGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRT---RFGMHFCGGTLISPEWVLTAAHC 60

Query: 437 VEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 495
           +E  P PS   + LG H     E     QE  V  +   P         D+ALL+   P 
Sbjct: 61  LEKSPRPSSYKVILGAHQEVNLEPH--VQEIEVSRLFLEPTR------KDIALLKLSSPA 112

Query: 496 KFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
                +IP C+P  +      T   +TGWG     
Sbjct: 113 VITDKVIPACLPSPNYVVADRTECFITGWGETQGT 147

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 3/53 (5%)

Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
              R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E 
Sbjct: 14  CPGRVVGGCVAHPHSWPWQVSLRT---RFGMHFCGGTLISPEWVLTAAHCLEK 63

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score = 53.4 bits (129), Expect = 6e-08
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 3/54 (5%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
                    +L+E  +PVI N +C       G    +    +CAG   G  DSC
Sbjct: 143 ETQGTFGAGLLKEAQLPVIENKVCNRYEFLNG---RVQSTELCAGHLAGGTDSC 193

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score =  151 bits (384), Expect = 7e-42
 Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 10/147 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIR--STYLHKCGAALFNENWAVTAAHCVED-VPPSDLLL 447
           I GG  A     PWQ ++    R        CG  L +  W ++AAHC ++  PP  L +
Sbjct: 1   IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTV 60

Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLR----FYEPVKFQPNIIP 503
            LG        E    Q+  V+    H +FD  T++ D+ALL+         +    +  
Sbjct: 61  ILGRTYRVVPGEE--EQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRT 118

Query: 504 ICVPEDDTNF-VGTSAHVTGWGRLYEG 529
           +C+P  D      T   ++G+G+    
Sbjct: 119 VCLPPADLQLPDWTECELSGYGKHEAL 145

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score = 75.0 bits (185), Expect = 3e-15
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 563 IVGGEKATFGKWPWQISLRQWIR--STYLHKCGAALFNENWAVTAAHCVED 611
           I GG  A     PWQ ++    R        CG  L +  W ++AAHC ++
Sbjct: 1   IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQE 51

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 9/57 (15%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSF------DSC 687
                  L+E  V +  +S C + +        + +  +CAG  +         D+C
Sbjct: 146 SPFYSERLKEAHVRLYPSSRCTSQHLLNRT---VTDNMLCAGDTRSGGPQANLHDAC 199

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score =  149 bits (380), Expect = 1e-41
 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 8/140 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP+ +SL+        H CGA L   N+ ++AAHCV +V    + + LG
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGG----HFCGATLIAPNFVMSAAHCVANVNVRAVRVVLG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+LS  E     Q   VQ +     +DP     D+ +L+         N+    +P   
Sbjct: 57  AHNLSRREP--TRQVFAVQRI-FENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQG 113

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
                G      GWG L   
Sbjct: 114 RRLGNGVQCLAMGWGLLGRN 133

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score = 68.7 bits (169), Expect = 3e-13
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG +A    WP+ +SL+        H CGA L   N+ ++AAHCV +
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGG----HFCGATLIAPNFVMSAAHCVAN 45

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 14/51 (27%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +  + SVLQE++V V+ +    +               +C   R      C
Sbjct: 133 NRGIASVLQELNVTVVTSLCRRSN--------------VCTLVRGRQAGVC 169

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score =  152 bits (385), Expect = 1e-41
 Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 18/160 (11%)

Query: 381 CGRRL----FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 436
           CGRR     F   RI+GG  +  G  PW  ++           C  +L +  W V+AAHC
Sbjct: 22  CGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIY-----IGDSFCAGSLVHTCWVVSAAHC 76

Query: 437 VEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP-RTFEYDLALLRFYEP 494
               P    + + LG+H  +   +    Q   ++    +  +      ++DL L+R  + 
Sbjct: 77  FSHSPPRDSVSVVLGQHFFNRTTDV--TQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKK 134

Query: 495 ----VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
                     + PIC+PE  + F  G    + GWG L E 
Sbjct: 135 GDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDEN 174

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 5/54 (9%)

Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           F   RI+GG  +  G  PW  ++           C  +L +  W V+AAHC   
Sbjct: 31  FLRPRIIGGSSSLPGSHPWLAAIY-----IGDSFCAGSLVHTCWVVSAAHCFSH 79

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
                S L+E  VP++ +  C +          I    +CAG+     D+C
Sbjct: 175 VSGYSSSLREALVPLVADHKCSSPEVYGA---DISPNMLCAGYFDCKSDAC 222

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ... Length = 131

 Score =  146 bits (371), Expect = 1e-41
 Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 9/137 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAHC      +  ++  G
Sbjct: 1   IVNGEEAVPGSWPWQVSLQ---DKTGFHFCGGSLINENWVVTAAHCG---VTTSDVVVAG 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E D  +  E    Q+ ++  V  + +++  T   D+ LL+      F   +  +C+P   
Sbjct: 55  EFDQGSSSE--KIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSAS 112

Query: 511 TNFV-GTSAHVTGWGRL 526
            +F  GT+   TGWG  
Sbjct: 113 DDFAAGTTCVTTGWGLT 129

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ... Length = 131

 Score = 75.7 bits (187), Expect = 1e-16
 Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IV GE+A  G WPWQ+SL+     T  H CG +L NENW VTAAHC   
Sbjct: 1   IVNGEEAVPGSWPWQVSLQ---DKTGFHFCGGSLINENWVVTAAHCGVT 46

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score =  149 bits (379), Expect = 2e-41
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 8/139 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG     G+ PWQ  L           CG  + +E + +TAAHC+         +R+G
Sbjct: 1   IVGGYNCKDGEVPWQALLIN---EENEGFCGGTILSEFYILTAAHCLYQ--AKRFKVRVG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           + +   EE   G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P  +P   
Sbjct: 56  DRNTEQEEG--GEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAP 113

Query: 511 TNFVGTSAHVTGWGRLYEG 529
               GT   ++GWG     
Sbjct: 114 P-ATGTKCLISGWGNTASS 131

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score = 70.6 bits (174), Expect = 7e-14
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG     G+ PWQ  L           CG  + +E + +TAAHC+  
Sbjct: 1   IVGGYNCKDGEVPWQALLIN---EENEGFCGGTILSEFYILTAAHCLYQ 46

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
               P  LQ +  PV++ + CE  Y        I     C G+ +G  DSC
Sbjct: 132 GADYPDELQCLDAPVLSQAKCEASYP-----GKITSNMFCVGFLEGGKDSC 177

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score =  149 bits (378), Expect = 3e-41
 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG KA   ++P+  S++   R    H CG AL +  + +TAA C +   P    + LG
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGR----HFCGGALIHARFVMTAASCFQSQNPGVSTVVLG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            +DL   E     ++       S   +DP+    DL LL+         ++  + +P  +
Sbjct: 57  AYDLRRRER--QSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQN 114

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
                GT   V GWG    G
Sbjct: 115 ATVEAGTRCQVAGWGSQRSG 134

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQII 617
           IVGG KA   ++P+  S++   R    H CG AL +  + +TAA C +     + 
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGR----HFCGGALIHARFVMTAASCFQSQNPGVS 51

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 9/52 (17%), Positives = 12/52 (23%), Gaps = 15/52 (28%)

Query: 637 DGPLPSVLQEVSVPVINNSLCE-TMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G L    + V+V V     C                  +C G        C
Sbjct: 134 GGRLSRFPRFVNVTVTPEDQCRPNN--------------VCTGVLTRRGGIC 171

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score =  146 bits (371), Expect = 3e-40
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 9/139 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP Q +L         + CG +L +  W +TAAHC++      + + LG
Sbjct: 1   IVGGVEAVPNSWPHQAALF---IDDM-YFCGGSLISPEWILTAAHCMDG--AGFVDVVLG 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++  +E        +      H  ++      D+A++R   PV     I  + +P  D
Sbjct: 55  AHNIREDEA--TQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTD 112

Query: 511 TNFVGTSAHVTGWGRLYEG 529
              VGT    TGWG   + 
Sbjct: 113 V-GVGTVVTPTGWGLPSDS 130

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score = 68.3 bits (168), Expect = 4e-13
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           IVGG +A    WP Q +L         + CG +L +  W +TAAHC++ 
Sbjct: 1   IVGGVEAVPNSWPHQAALF---IDDM-YFCGGSLISPEWILTAAHCMDG 45

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score =  144 bits (366), Expect = 1e-39
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 5/140 (3%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A     P+  SL+        H CG  L + ++ +TAAHC+ D+P   + + LG
Sbjct: 1   IVGGHEAQPHSRPYMASLQMRGNPGS-HFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLG 59

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++ T+E     Q   V  V  +  +D      D+ L++   P     ++  + +P+ D
Sbjct: 60  AHNVRTQEP--TQQHFSVAQVFLNN-YDAENKLNDILLIQLSSPANLSASVATVQLPQQD 116

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
                GT     GWGR+   
Sbjct: 117 QPVPHGTQCLAMGWGRVGAH 136

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQII 617
           IVGG +A     P+  SL+        H CG  L + ++ +TAAHC+ D+  +++
Sbjct: 1   IVGGHEAQPHSRPYMASLQMRGNPGS-HFCGGTLIHPSFVLTAAHCLRDIPQRLV 54

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score = 47.5 bits (114), Expect = 3e-06
 Identities = 10/51 (19%), Positives = 14/51 (27%), Gaps = 14/51 (27%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
             P   VLQE++V V+                      IC    +     C
Sbjct: 136 HDPPAQVLQELNVTVVTFFCRPHN--------------ICTFVPRRKAGIC 172

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score =  144 bits (366), Expect = 1e-39
 Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 12/139 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      P Q+SL         H CG +L NENW V+AAHC      S + +RLG
Sbjct: 1   IVGGYECKAYSQPHQVSLNSGY-----HFCGGSLVNENWVVSAAHCY----KSRVEVRLG 51

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E     Q      V  HP +     + D+ L++  +P      + P+ +P   
Sbjct: 52  EHNIKVTEG--SEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSC 109

Query: 511 TNFVGTSAHVTGWGRLYEG 529
               GT   V+GWG     
Sbjct: 110 AP-AGTMCTVSGWGNTMSS 127

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score = 71.4 bits (176), Expect = 4e-14
 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           IVGG +      P Q+SL         H CG +L NENW V+AAHC +   
Sbjct: 1   IVGGYECKAYSQPHQVSLNSGY-----HFCGGSLVNENWVVSAAHCYKSRV 46

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score = 51.0 bits (123), Expect = 3e-07
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
                + LQ +++P+++ S C   Y        I     CAG+ +G  DSC
Sbjct: 127 STADSNKLQCLNIPILSYSDCNNSYP-----GMITNAMFCAGYLEGGKDSC 172

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score =  144 bits (366), Expect = 1e-39
 Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 21/173 (12%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG++    + P+ ++L     ++    C  AL N  W +TAAHC       ++ ++LG
Sbjct: 1   VVGGDECNINEHPFLVALYT--SASSTIHCAGALINREWVLTAAHCD----RRNIRIKLG 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H  +   E    +  R +         P   + D+ L+R   PV +  +I P+ +P   
Sbjct: 55  MHSKNIRNEDEQIRVPRGKYF-CLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRS 113

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM-------ATCWNHFLGNRI 556
              VG+   + GWG++    +      P               C   +     
Sbjct: 114 RG-VGSRCRIMGWGKISTTTY------PDVPHCTNIFIVKHKWCEPLYPWVPA 159

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score = 70.7 bits (174), Expect = 7e-14
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           +VGG++    + P+ ++L     ++    C  AL N  W +TAAHC     
Sbjct: 1   VVGGDECNINEHPFLVALYT--SASSTIHCAGALINREWVLTAAHCDRRNI 49

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            ++    P V    ++ ++ +  CE +Y             +CAG  KG  D+C
Sbjct: 127 KISTTTYPDVPHCTNIFIVKHKWCEPLYPWVP----ADSRTLCAGILKGGRDTC 176

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score =  143 bits (364), Expect = 2e-39
 Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 9/139 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G        PWQ +L           CGA L +  W +TAAHC          +RLG
Sbjct: 1   IINGSDCDMHTQPWQAALLLRPNQ---LYCGAVLVHPQWLLTAAHCR----KKVFRVRLG 53

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            + LS   E    Q  +      HP +       DL L++    ++   ++ PI V    
Sbjct: 54  HYSLSPVYESGQ-QMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHC 112

Query: 511 TNFVGTSAHVTGWGRLYEG 529
            +  GT   V+GWG     
Sbjct: 113 PS-AGTKCLVSGWGTTKSP 130

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score = 70.3 bits (173), Expect = 8e-14
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+ G        PWQ +L           CGA L +  W +TAAHC + ++
Sbjct: 1   IINGSDCDMHTQPWQAALLLRPNQ---LYCGAVLVHPQWLLTAAHCRKKVF 48

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score = 47.2 bits (113), Expect = 6e-06
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 6/51 (11%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
               P VLQ +++ V++   CE  Y        I +   CAG + G  DSC
Sbjct: 131 QVHFPKVLQCLNISVLSQKRCEDAYP-----RQIDDTMFCAGDKAGR-DSC 175

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score =  144 bits (366), Expect = 2e-39
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIR-STYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLR 448
           I+GGE  T    PW  ++ +  R  +  + CG +L +  W ++A HC  D P   D ++ 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALLR----FYEPVKFQPNII 502
           LG   L++  +     +  V+ +  H  +   T  +  D+ALL+         +    I 
Sbjct: 61  LGRSRLNSNTQG--EMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118

Query: 503 PICVPEDDTNF-VGTSAHVTGWGRLYEG 529
            I +P    +   GTS  +TG+G+    
Sbjct: 119 TISLPSMYNDPQFGTSCEITGFGKENST 146

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 563 IVGGEKATFGKWPWQISLRQWIR-STYLHKCGAALFNENWAVTAAHCVED 611
           I+GGE  T    PW  ++ +  R  +  + CG +L +  W ++A HC  D
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFID 50

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           D   P  L+   V +I++  C+  +        +    +CA   +   DSC
Sbjct: 147 DYLYPEQLKMTVVKLISHRECQQPHYYGS---EVTTKMLCAADPQWKTDSC 194

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score =  143 bits (364), Expect = 2e-39
 Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 13/139 (9%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G     G  PWQ++L     S     CG  L NE W +TAAHC      ++  + LG
Sbjct: 1   IIDGAPCARGSHPWQVALL----SGNQLHCGGVLVNERWVLTAAHCK----MNEYTVHLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
              L         Q  +      HP +  +T   DL L++     +    +  + +P   
Sbjct: 53  SDTLGDRRA----QRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRC 108

Query: 511 TNFVGTSAHVTGWGRLYEG 529
               GT+  V+GWG     
Sbjct: 109 EP-PGTTCTVSGWGTTTSP 126

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score = 70.3 bits (173), Expect = 8e-14
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+ G     G  PWQ++L     S     CG  L NE W +TAAHC  + +
Sbjct: 1   IIDGAPCARGSHPWQVALL----SGNQLHCGGVLVNERWVLTAAHCKMNEY 47

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score =  143 bits (364), Expect = 2e-39
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 7/140 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG + +    P+               CG  L  + + +TAAHC        + + LG
Sbjct: 1   IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCK----GRSMTVTLG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++  +EE    Q   V     HP ++P     D+ LL+     K    + P+ +P  +
Sbjct: 57  AHNIKAKEET--QQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRN 114

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
            +   G   +V GWG++   
Sbjct: 115 AHVKPGDECYVAGWGKVTPD 134

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 12/51 (23%), Positives = 19/51 (37%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG + +    P+               CG  L  + + +TAAHC     
Sbjct: 1   IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKGRSM 51

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score = 52.9 bits (128), Expect = 7e-08
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           DG  P  L EV + V  + +CE+ ++            IC G  K    S 
Sbjct: 134 DGEFPKTLHEVKLTVQKDQVCESQFQ--SSY--NRANEICVGDSKIKGASF 180

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score =  143 bits (364), Expect = 3e-39
 Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 12/141 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      P+  SL++       H CG  L +  W +TAAHC+     + L L LG
Sbjct: 1   IIGGREVIPHSRPYMASLQR----NGSHLCGGVLVHPKWVLTAAHCLAQ-RMAQLRLVLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP-RTFEYDLALLRFYEPVKFQPNIIPICVPED 509
            H L +           ++    HP++ P    E DLALL+    VK    I P+ +P  
Sbjct: 56  LHTLDSPG-----LTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSK 110

Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
                 GT   + GWG  ++G
Sbjct: 111 RQVVAAGTRCSMAGWGLTHQG 131

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score = 71.1 bits (175), Expect = 6e-14
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQI 616
           I+GG +      P+  SL++       H CG  L +  W +TAAHC+    +Q+
Sbjct: 1   IIGGREVIPHSRPYMASLQR----NGSHLCGGVLVHPKWVLTAAHCLAQRMAQL 50

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 3/51 (5%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G L  VL+E+ + V++  +C       G    +    +C          C
Sbjct: 131 GGRLSRVLRELDLQVLDTRMCNNSRFWNG---SLSPSMVCLAADSKDQAPC 178

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score =  143 bits (362), Expect = 4e-39
 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 12/139 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL         H CG +L N  W V+AAHC      S + +RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLNSGY-----HFCGGSLINSQWVVSAAHCY----KSGIQVRLG 51

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E     Q         HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEG--NEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109

Query: 511 TNFVGTSAHVTGWGRLYEG 529
            +  GT   ++GWG     
Sbjct: 110 AS-AGTQCLISGWGNTKSS 127

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score = 70.6 bits (174), Expect = 7e-14
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           IVGG        P+Q+SL         H CG +L N  W V+AAHC +   
Sbjct: 1   IVGGYTCGANTVPYQVSLNSGY-----HFCGGSLINSQWVVSAAHCYKSGI 46

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score = 49.4 bits (119), Expect = 8e-07
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
               P VL+ +  P++++S C++ Y        I     CAG+ +G  DSC
Sbjct: 128 GTSYPDVLKCLKAPILSDSSCKSAYP-----GQITSNMFCAGYLEGGKDSC 173

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score =  142 bits (361), Expect = 6e-39
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 7/140 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG ++     P+   L           CG  L +  + +TAAHC       ++ + LG
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK----GREITVILG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            HD+   E     Q+ +V+    H  ++     +D+ LL+  + V+  P +  + +P   
Sbjct: 57  AHDVRKRES--TQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPS 114

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
                G      GWG+    
Sbjct: 115 DFIHPGAMCWAAGWGKTGVR 134

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 13/51 (25%), Positives = 20/51 (39%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG ++     P+   L           CG  L +  + +TAAHC     
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGREI 51

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score = 49.8 bits (120), Expect = 6e-07
 Identities = 7/51 (13%), Positives = 16/51 (31%), Gaps = 6/51 (11%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
             P    L+EV + +++   C           +  +  +C G       + 
Sbjct: 134 RDPTSYTLREVELRIMDEKACVDYR------YYEYKFQVCVGSPTTLRAAF 178

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score =  143 bits (362), Expect = 8e-39
 Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 14/146 (9%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
           I+GG  +  G  PW  ++           C  +L +  W V+AAHC    P    + + L
Sbjct: 1   IIGGSSSLPGSHPWLAAIY-----IGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVL 55

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDP-RTFEYDLALLRFYEP----VKFQPNIIPI 504
           G+H  +   +    Q   ++    +  +      ++DL L+R  +           + PI
Sbjct: 56  GQHFFNRTTDV--TQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPI 113

Query: 505 CVPEDDTNFV-GTSAHVTGWGRLYEG 529
           C+PE  + F  G    + GWG L E 
Sbjct: 114 CLPEPGSTFPAGHKCQIAGWGHLDEN 139

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           I+GG  +  G  PW  ++           C  +L +  W V+AAHC   
Sbjct: 1   IIGGSSSLPGSHPWLAAIY-----IGDSFCAGSLVHTCWVVSAAHCFSH 44

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
                S L+E  VP++ +  C +          I    +CAG+     D+C
Sbjct: 140 VSGYSSSLREALVPLVADHKCSSPEVYGA---DISPNMLCAGYFDCKSDAC 187

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score =  141 bits (359), Expect = 1e-38
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+   L  W + +   +CG  L  +++ +TAAHC      S + + LG
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSL-KRCGGFLIRDDFVLTAAHCW----GSSINVTLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++  +E     Q   V+    HP ++P+ F  D+ LL+     K    + P+ +P + 
Sbjct: 56  AHNIKEQEPTQ--QFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNK 113

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
                G +  V GWG+    
Sbjct: 114 AQVKPGQTCSVAGWGQTAPL 133

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score = 69.8 bits (172), Expect = 1e-13
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG +A     P+   L  W + +   +CG  L  +++ +TAAHC     
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSL-KRCGGFLIRDDFVLTAAHCWGSSI 50

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score = 56.0 bits (136), Expect = 6e-09
 Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            G     LQEV + V  +  CE+  R      +   I +C G  +    S 
Sbjct: 133 LGKHSHTLQEVKMTVQEDRKCESDLRHY----YDSTIELCVGDPEIKKTSF 179

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score =  141 bits (358), Expect = 2e-38
 Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 11/141 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +V G        P+Q +L           CG  L +  W +TAAHC       +L + LG
Sbjct: 1   LVHGGPCDKTSHPYQAALYTSGH----LLCGGVLIHPLWVLTAAHCK----KPNLQVFLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           +H+L   E     ++  V     HP +D  + + D+ LLR   P K    I P+ +  D 
Sbjct: 53  KHNLRQRESSQ--EQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDC 110

Query: 511 TNFVGTSAHVTGWGRLYEGRF 531
           +    TS H+ GWG+  +G F
Sbjct: 111 S-ANTTSCHILGWGKTADGDF 130

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score = 84.1 bits (209), Expect = 1e-18
 Identities = 29/181 (16%), Positives = 49/181 (27%), Gaps = 65/181 (35%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS-------- 614
           +V G        P+Q +L           CG  L +  W +TAAHC +            
Sbjct: 1   LVHGGPCDKTSHPYQAALYTSGH----LLCGGVLIHPLWVLTAAHCKKPNLQVFLGKHNL 56

Query: 615 -------QIIP---IIQNCRRRESN------LWKMA-------------LADGPLP---- 641
                  +       + +     ++      L ++A             L          
Sbjct: 57  RQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSANTTS 116

Query: 642 ---------------SVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDS 686
                            +Q   + +++   CE  Y        I +  +CAG  K   DS
Sbjct: 117 CHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYP-----GQITQNMLCAGDEKYGKDS 171

Query: 687 C 687
           C
Sbjct: 172 C 172

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score =  141 bits (358), Expect = 2e-38
 Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 7/140 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      P+   L     +     CG  L   N+ +TAAHC        + + LG
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA----GRSITVTLG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+++ EE+   +Q+  V     HP+++  T  +D+ LL+  E       +  +  P   
Sbjct: 57  AHNITEEEDT--WQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQF 114

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
                G    V GWGR    
Sbjct: 115 NFVPPGRMCRVAGWGRTGVL 134

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score = 71.0 bits (175), Expect = 5e-14
 Identities = 14/51 (27%), Positives = 20/51 (39%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG +      P+   L     +     CG  L   N+ +TAAHC     
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSI 51

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 8/51 (15%), Positives = 18/51 (35%), Gaps = 6/51 (11%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
             P    LQEV + +++   C          +    + +C G  + +  + 
Sbjct: 134 LKPGSDTLQEVKLRLMDPQACSHFR------DFDHNLQLCVGNPRKTKSAF 178

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score =  141 bits (357), Expect = 2e-38
 Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ GE  +    PWQ +L           C   L +  W ++AAHC      +   + LG
Sbjct: 1   IINGEDCSPHSQPWQAALVMENE----LFCSGVLVHPQWVLSAAHCF----QNSYTIGLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H L  ++EP   Q     +   HP+++      DL L++  E V     I  I +    
Sbjct: 53  LHSLEADQEPGS-QMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIASQC 111

Query: 511 TNFVGTSAHVTGWGRLYEGRF 531
               G S  V+GWG L  GR 
Sbjct: 112 PT-AGNSCLVSGWGLLANGRM 131

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score = 67.6 bits (166), Expect = 8e-13
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+ GE  +    PWQ +L           C   L +  W ++AAHC ++ +
Sbjct: 1   IINGEDCSPHSQPWQAALVMENE----LFCSGVLVHPQWVLSAAHCFQNSY 47

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score = 52.9 bits (128), Expect = 6e-08
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
            LA+G +P+VLQ V+V V++  +C  +Y              CAG  +   DSC
Sbjct: 125 LLANGRMPTVLQCVNVSVVSEEVCSKLYD-----PLYHPSMFCAGGGQDQKDSC 173

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score =  141 bits (357), Expect = 3e-38
 Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 8/139 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG++    +  + ++L      +    CG  L N+ W +TAAHC       +  ++LG
Sbjct: 1   IIGGDECNINEHRFLVALY--TSRSRTLFCGGTLINQEWVLTAAHCD----RKNFRIKLG 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H      E         +        +   ++ D+ L+R   PVK   +I P  +P   
Sbjct: 55  MHSKKVPNEDEQ-TRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSP 113

Query: 511 TNFVGTSAHVTGWGRLYEG 529
            +  G+   + GWGR+   
Sbjct: 114 PSV-GSVCRIMGWGRISPT 131

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score = 68.7 bits (169), Expect = 3e-13
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG++    +  + ++L      +    CG  L N+ W +TAAHC    +
Sbjct: 1   IIGGDECNINEHRFLVALY--TSRSRTLFCGGTLINQEWVLTAAHCDRKNF 49

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score = 52.6 bits (127), Expect = 9e-08
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +G  P V   V++ ++   +C   Y    F        +CAG  +G  D+C
Sbjct: 132 EGTYPDVPHCVNINLLEYEMCRAPYP--EFELPATSRTLCAGILEGGKDTC 180

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score =  140 bits (356), Expect = 3e-38
 Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 8/140 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+   L         H CG  L  E++ +TAAHC+     S + + LG
Sbjct: 1   IIGGHEAKPHSRPYMAFLLFKTSGKS-HICGGFLVREDFVLTAAHCL----GSSINVTLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++   E     Q   V+    HP ++  T   D+ LL+          + PI +P   
Sbjct: 56  AHNIMERERTQ--QVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSL 113

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
                G    V GWGRL   
Sbjct: 114 AEVKPGMMCSVAGWGRLGVN 133

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score = 69.1 bits (170), Expect = 3e-13
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG +A     P+   L         H CG  L  E++ +TAAHC+    
Sbjct: 1   IIGGHEAKPHSRPYMAFLLFKTSGKS-HICGGFLVREDFVLTAAHCLGSSI 50

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score = 54.4 bits (132), Expect = 2e-08
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           + P    LQEV + V +   C   ++      +IP   ICAG      +S 
Sbjct: 133 NMPSTDKLQEVDLEVQSEEKCIARFK-----NYIPFTQICAGDPSKRKNSF 178

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score =  140 bits (355), Expect = 4e-38
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 8/142 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG ++     P+   L+    +    +CG  L  E++ +TAAHC      S++ + LG
Sbjct: 1   IIGGRESRPHSRPYMAYLQIQSPAGQ-SRCGGFLVREDFVLTAAHCW----GSNINVTLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++   E     Q    +    HPQ++ RT + D+ LL+    V+   N+ P+ +P   
Sbjct: 56  AHNIQRREN--TQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQ 113

Query: 511 TNF-VGTSAHVTGWGRLYEGRF 531
                GT   V GWGR+   R 
Sbjct: 114 EGLRPGTLCTVAGWGRVSMRRG 135

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score = 69.1 bits (170), Expect = 2e-13
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG ++     P+   L+    +    +CG  L  E++ +TAAHC     
Sbjct: 1   IIGGRESRPHSRPYMAYLQIQSPAGQ-SRCGGFLVREDFVLTAAHCWGSNI 50

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score = 53.3 bits (129), Expect = 5e-08
 Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 635 LADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           ++       L+EV + V  +  C  ++       + P   IC G R+    + 
Sbjct: 130 VSMRRGTDTLREVQLRVQRDRQCLRIFG-----SYDPRRQICVGDRRERKAAF 177

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score =  139 bits (352), Expect = 1e-37
 Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 12/145 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++GG++    +    ++      ST    C   L NE W +TAAHC      ++  ++LG
Sbjct: 1   VIGGDECNINEHRSLVAFF---NSTG-FFCSGTLINEEWVLTAAHCD----NTNFQMKLG 52

Query: 451 EHDLSTEEEPYGYQERRV-QIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
            H      E    Q R   +      + +    + D+ L++    V    +I+P+ +P  
Sbjct: 53  VHSKKVLNEDE--QTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPSS 110

Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRS 534
             +  G+  H+ GWG +   +    
Sbjct: 111 PPSV-GSVCHIMGWGSITPIKVTYP 134

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score = 68.0 bits (167), Expect = 6e-13
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           ++GG++    +    ++      ST    C   L NE W +TAAHC    +
Sbjct: 1   VIGGDECNINEHRSLVAFF---NSTG-FFCSGTLINEEWVLTAAHCDNTNF 47

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score = 50.2 bits (121), Expect = 5e-07
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
               P V     + ++++++C+  Y     +       +CAG  +G  D+C
Sbjct: 130 KVTYPDVPYCAYINLLDDAVCQAGYP--ELL--TEYRTLCAGILEGGKDTC 176

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score =  138 bits (351), Expect = 2e-37
 Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++GG++    +  +   +           CG  L N+ W +TA HC       ++ + LG
Sbjct: 1   VIGGDECNINEHRFLALVY-----ANGSLCGGTLINQEWVLTARHCD----RGNMRIYLG 51

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H+L    +    +    +        +   ++ D+ L+R   PV+   +I P+ +P + 
Sbjct: 52  MHNLKVLNKDAL-RRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNP 110

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRS 534
            + VG+   + GWG +        
Sbjct: 111 PS-VGSVCRIMGWGTITSPNATLP 133

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score = 65.2 bits (160), Expect = 5e-12
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 5/51 (9%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           ++GG++    +  +   +           CG  L N+ W +TA HC     
Sbjct: 1   VIGGDECNINEHRFLALVY-----ANGSLCGGTLINQEWVLTARHCDRGNM 46

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score = 52.5 bits (127), Expect = 9e-08
 Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +  LP V    ++ +++ ++C+  Y+       +    +CAG  +G  D+C
Sbjct: 129 NATLPDVPHCANINILDYAVCQAAYK------GLAATTLCAGILEGGKDTC 173

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score =  138 bits (350), Expect = 2e-37
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 11/142 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G +A  G +P+Q  L   ++      CG +L +  W +TAAHCV D     +++ LG
Sbjct: 1   IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD--AVSVVVYLG 58

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP--- 507
                  E          + + SH  F+P T+  D+AL++    V++  NI PI +P   
Sbjct: 59  SAVQYEGE-----AVVNSERIISHSMFNPDTYLNDVALIKI-PHVEYTDNIQPIRLPSGE 112

Query: 508 EDDTNFVGTSAHVTGWGRLYEG 529
           E +  F    A V+GWG+    
Sbjct: 113 ELNNKFENIWATVSGWGQSNTD 134

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score = 74.2 bits (183), Expect = 5e-15
 Identities = 19/52 (36%), Positives = 28/52 (53%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
           I+ G +A  G +P+Q  L   ++      CG +L +  W +TAAHCV D  S
Sbjct: 1   IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDAVS 52

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score =  137 bits (348), Expect = 4e-37
 Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 10/140 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG + T    P+ + L           C  AL  ++W +TAAHC  +       + LG
Sbjct: 1   IIGGNEVTPHSRPYMVLLSL----DRKTICAGALIAKDWVLTAAHCNLN---KRSQVILG 53

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H ++ EE     Q   V+    +P +DP T E DL LL+  E  K    +  + +P+  
Sbjct: 54  AHSITREEPTK--QIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKG 111

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
            +   GT   V GWGR +  
Sbjct: 112 DDVKPGTMCQVAGWGRTHNS 131

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score = 64.5 bits (158), Expect = 8e-12
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           I+GG + T    P+ + L           C  AL  ++W +TAAHC  +
Sbjct: 1   IIGGNEVTPHSRPYMVLLSL----DRKTICAGALIAKDWVLTAAHCNLN 45

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score = 53.3 bits (129), Expect = 5e-08
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
                  L+EV + +I+  +C        F   I    +CAG  +G  DSC
Sbjct: 131 SASWSDTLREVEITIIDRKVCNDRNH-YNFNPVIGMNMVCAGSLRGGRDSC 180

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score =  135 bits (343), Expect = 3e-36
 Identities = 35/140 (25%), Positives = 50/140 (35%), Gaps = 12/140 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +V G         W +SLR   +    H CG +L  E+W +TA  C       D    LG
Sbjct: 1   VVNGIPTR-TNIGWMVSLRYRNK----HICGGSLIKESWVLTARQCFPSRDLKDYEAWLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            HD+    +    Q   V  +   P+        DL L++   P      +  I +P   
Sbjct: 56  IHDVHGRGDEKCKQVLNVSQLVYGPEG------SDLVLMKLARPAVLDDFVSTIDLPNYG 109

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
           +     TS  V GWG     
Sbjct: 110 STIPEKTSCSVYGWGYTGLI 129

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +V G         W +SLR   +    H CG +L  E+W +TA  C   
Sbjct: 1   VVNGIPTR-TNIGWMVSLRYRNK----HICGGSLIKESWVLTARQCFPS 44

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 3/55 (5%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
                    +L+   + ++ N  C   +R       + E  ICAG  K     CE
Sbjct: 125 YTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVT---LNESEICAGAEKIGSGPCE 176

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score =  135 bits (342), Expect = 3e-36
 Identities = 40/176 (22%), Positives = 57/176 (32%), Gaps = 29/176 (16%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLR 448
           +VGG     G  PW +SLR        H CG +L  E W +TA  C     +P +   + 
Sbjct: 1   VVGGHP---GNSPWTVSLRN---RQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVW 54

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           LG    + +      Q   V  +   P          L LL+    V     +  IC+P 
Sbjct: 55  LGTLFQNPQHGEPSLQRVPVAKMVCGPSG------SQLVLLKLERSVTLNQRVALICLPP 108

Query: 509 DDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQE-------MATCWNHFLGNRI 556
           +      GT   + GWG           G+                C N     R+
Sbjct: 109 EWYVVPPGTKCEIAGWGETKGT------GNDTVLNVALLNVISNQEC-NIKHRGRV 157

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG     G  PW +SLR        H CG +L  E W +TA  C   
Sbjct: 1   VVGGHP---GNSPWTVSLRN---RQGQHFCGGSLVKEQWILTARQCFSS 43

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 5/55 (9%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
                   +VL    + VI+N  C   +R       + E  +C         +CE
Sbjct: 126 ETKGTGNDTVLNVALLNVISNQECNIKHRGR-----VRESEMCTEGLLAPVGACE 175

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score =  135 bits (341), Expect = 4e-36
 Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 22/158 (13%)

Query: 388 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLL 447
           ++  V  +       PW +++ ++ +    ++CG  L + NW +TAAHC          +
Sbjct: 1   AAPPVQSQVDCENSQPWHVAVYRFNK----YQCGGVLLDRNWVLTAAHCY----NDKYQV 52

Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRT-----------FEYDLALLRFYEPVK 496
            LG+++   +E     Q R V     HP F+              +  DL LLR  +P  
Sbjct: 53  WLGKNNFLEDEPS--DQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPAD 110

Query: 497 FQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
               + PI +P ++    G++   +GWG     +F+  
Sbjct: 111 ITDVVKPITLPTEEPKL-GSTCLASGWGSTTPIKFKYP 147

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           ++  V  +       PW +++ ++ +    ++CG  L + NW +TAAHC  D +
Sbjct: 1   AAPPVQSQVDCENSQPWHVAVYRFNK----YQCGGVLLDRNWVLTAAHCYNDKY 50

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score = 50.3 bits (121), Expect = 6e-07
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
               P  LQ V++ ++ N  C+  +        + +  +CAG   G   +C
Sbjct: 143 KFKYPDDLQCVNLKLLPNEDCDKAHE-----MKVTDAMLCAGEMDGGSYTC 188

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score =  134 bits (339), Expect = 6e-36
 Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 14/147 (9%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G +      PWQ +L           CG  L  + W +TAAHC          +RLG
Sbjct: 1   ILEGRECIPHSQPWQAALF----QGERLICGGVLVGDRWVLTAAHCK----KQKYSVRLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFD---PRTFEYDLALLRFYEPVKFQPNIIPICVP 507
           +H L + ++P   QE +V     HP ++   P    +D+ L+R          + P+ + 
Sbjct: 53  DHSLQSRDQP--EQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLA 110

Query: 508 EDDTNFVGTSAHVTGWGRLYEGRFRRS 534
                 VG    ++GWG +   +    
Sbjct: 111 NLCPK-VGQKCIISGWGTVTSPQENFP 136

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score = 67.2 bits (165), Expect = 1e-12
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+ G +      PWQ +L           CG  L  + W +TAAHC +  +
Sbjct: 1   ILEGRECIPHSQPWQAALF----QGERLICGGVLVGDRWVLTAAHCKKQKY 47

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
               P+ L    V + + + CE  Y        I E  +CAG   G+ D+C
Sbjct: 132 QENFPNTLNCAEVKIYSQNKCERAYP-----GKITEGMVCAGSSNGA-DTC 176

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score =  135 bits (342), Expect = 9e-36
 Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 16/163 (9%)

Query: 369 SQGINMSNYKEVCGRRLFP--SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFN 426
           +QG  +    + C                       PWQ+ L     S     CG  +  
Sbjct: 29  AQGYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKLT---NSEGKDFCGGVIIR 85

Query: 427 ENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDL 486
           EN+ +T A C       ++ ++   +  S +         ++  V  H ++D    E DL
Sbjct: 86  ENFVLTTAKCSLL--HRNITVKTYFNRTSQDP-----LMIKITHVHVHMRYDADAGENDL 138

Query: 487 ALLRFYEPVKFQPNIIPICVPEDDTN----FVGTSAHVTGWGR 525
           +LL    P++     +P+C PE D         T   ++GW R
Sbjct: 139 SLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR 181

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 66.7 bits (163), Expect = 3e-12
 Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 3/51 (5%)

Query: 560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
                          PWQ+ L     S     CG  +  EN+ +T A C  
Sbjct: 50  GVLTSEKRAPDLQDLPWQVKLT---NSEGKDFCGGVIIRENFVLTTAKCSL 97

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 6/52 (11%), Positives = 12/52 (23%), Gaps = 8/52 (15%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
              L + L    V ++    C  +         +     C      S  +  
Sbjct: 183 GTDLGNSLTTRPVTLVEGEECGQVLNVT-----VTTRTYCER---SSVAAMH 226

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score =  135 bits (342), Expect = 2e-35
 Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 14/143 (9%)

Query: 387 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLL 446
                           PWQ+ L     S     CG  +  EN+ +T A C       ++ 
Sbjct: 90  CGVLTSEKRAPDLQDLPWQVKLT---NSEGKDFCGGVIIRENFVLTTAKCSLL--HRNIT 144

Query: 447 LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
           ++   +  S +         ++  V  H ++D    E DL+LL    P++     +P+C 
Sbjct: 145 VKTYFNRTSQDP-----LMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCT 199

Query: 507 PEDDTN----FVGTSAHVTGWGR 525
           PE D         T   ++GW R
Sbjct: 200 PEKDFAEHLLIPRTRGLLSGWAR 222

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 3/53 (5%)

Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
                           PWQ+ L     S     CG  +  EN+ +T A C   
Sbjct: 90  CGVLTSEKRAPDLQDLPWQVKLT---NSEGKDFCGGVIIRENFVLTTAKCSLL 139

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 45.1 bits (107), Expect = 5e-05
 Identities = 6/51 (11%), Positives = 12/51 (23%), Gaps = 8/51 (15%)

Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
             L + L    V ++    C  +         +     C      S  +  
Sbjct: 225 TDLGNSLTTRPVTLVEGEECGQVLNVT-----VTTRTYCER---SSVAAMH 267

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score =  139 bits (351), Expect = 3e-35
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 32/166 (19%)

Query: 380 VCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
           +CG         +    +   + PW ++++   +      C  AL ++ W +TAAHC  D
Sbjct: 219 ICGVG------NMSANASDQERTPWHVTIKPKSQ----ETCRGALISDQWVLTAAHCFRD 268

Query: 440 V-PPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD---------PRTFEYDLALL 489
               S   + +G+            +E  ++     P FD            +  D+ALL
Sbjct: 269 GNDHSLWRVNVGDPKSQWG------KEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALL 322

Query: 490 RFYEPVKFQPNIIPICVPEDDTNFV------GTSAHVTGWGRLYEG 529
           +  + VK   +  PIC+P      +      G++        L + 
Sbjct: 323 KLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQ 368

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score = 76.2 bits (187), Expect = 1e-14
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
             +    +   + PW ++++   +      C  AL ++ W +TAAHC  D
Sbjct: 223 GNMSANASDQERTPWHVTIKPKSQ----ETCRGALISDQWVLTAAHCFRD 268

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score =  130 bits (330), Expect = 1e-34
 Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 24/155 (15%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG K      PWQ+++         + CG  L + +W +TAAHC      ++  + LG
Sbjct: 1   IVGGYKCEKNSQPWQVAVINE------YLCGGVLIDPSWVITAAHCY----SNNYQVLLG 50

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRT-----------FEYDLALLRFYEPVKFQP 499
            ++L  +E     Q R V+    HP + P                DL LL   EP     
Sbjct: 51  RNNLFKDEPF--AQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITG 108

Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
            +  I +P  +   VG++   +GWG         S
Sbjct: 109 GVKVIDLPTKEPK-VGSTCLASGWGSTNPSEMVVS 142

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score = 68.4 bits (168), Expect = 5e-13
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           IVGG K      PWQ+++         + CG  L + +W +TAAHC  + +
Sbjct: 1   IVGGYKCEKNSQPWQVAVINE------YLCGGVLIDPSWVITAAHCYSNNY 45

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +  +   LQ V++ +++N  C   Y+     +++ ++ +CAG  +G  D+C
Sbjct: 138 EMVVSHDLQCVNIHLLSNEKCIETYK-----DNVTDVMLCAGEMEGGKDTC 183

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score =  136 bits (345), Expect = 2e-34
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 27/179 (15%)

Query: 362 DESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCG 421
           +   ++  Q I+ S    +CG            +   + K PWQ  +     S     C 
Sbjct: 192 ECLEDVFYQMIDESQSLSLCGMV------WEHRKGTDYHKQPWQAKISVIRPSKGHESCM 245

Query: 422 AALFNENWAVTAAHCVE-DVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD-- 478
            A+ +E + +TAAHC   D     + + +G             ++  +++V  HP ++  
Sbjct: 246 GAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK----------RDLEIEVVLFHPNYNIN 295

Query: 479 -------PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
                  P  ++YD+AL++    +K+   I PIC+P  +           T   +  E 
Sbjct: 296 GKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEE 354

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score = 71.5 bits (175), Expect = 3e-13
 Identities = 13/50 (26%), Positives = 20/50 (40%)

Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
                +   + K PWQ  +     S     C  A+ +E + +TAAHC   
Sbjct: 214 VWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV 263

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 11/63 (17%), Positives = 19/63 (30%), Gaps = 12/63 (19%)

Query: 638 GPLPSVLQEVSVPVINN---SLCETMYRAAGFIEHIPEI-------FICAGWRKGSF--D 685
                 L    V + N      CE   + A   + + +I       F+C G        +
Sbjct: 367 SEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPN 426

Query: 686 SCE 688
           +C 
Sbjct: 427 TCR 429

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score =  129 bits (327), Expect = 3e-34
 Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 22/155 (14%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      PWQ+ +    R      CG  L +  W +TAAHC+     +  ++ LG
Sbjct: 1   IVGGWECEKHSQPWQVLVASRGR----AVCGGVLVHPQWVLTAAHCI----RNKSVILLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTF-----------EYDLALLRFYEPVKFQP 499
            H L   E+    Q  +V     HP +D                +DL LLR  EP +   
Sbjct: 53  RHSLFHPEDT--GQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTD 110

Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
            +  + +P  +   +GT+ + +GWG +    F   
Sbjct: 111 AVKVMDLPTQEPA-LGTTCYASGWGSIEPEEFLTP 144

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score = 68.4 bits (168), Expect = 5e-13
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           IVGG +      PWQ+ +    R      CG  L +  W +TAAHC+ +  
Sbjct: 1   IVGGWECEKHSQPWQVLVASRGR----AVCGGVLVHPQWVLTAAHCIRNKS 47

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score = 49.5 bits (119), Expect = 9e-07
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +   P  LQ V + VI+N +C  ++      + + +  +CAG   G   +C
Sbjct: 140 EFLTPKKLQCVDLHVISNDVCAQVHP-----QKVTKFMLCAGRWTGGKSTC 185

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score =  129 bits (326), Expect = 4e-34
 Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 22/155 (14%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG        PWQ+++         H CG  L + NW +TAAHC          + LG
Sbjct: 1   VVGGFNCEKNSQPWQVAVYYQKE----HICGGVLLDRNWVLTAAHCY----VDQYEVWLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRT-----------FEYDLALLRFYEPVKFQP 499
           ++ L  EE     Q R V     HP F+              F  DL LLR  +P     
Sbjct: 53  KNKLFQEEPS--AQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITD 110

Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
            + PI +P  +    G+    +GWG +   R+++ 
Sbjct: 111 VVKPIALPTKEPK-PGSKCLASGWGSITPTRWQKP 144

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           +VGG        PWQ+++         H CG  L + NW +TAAHC  D +
Sbjct: 1   VVGGFNCEKNSQPWQVAVYYQKE----HICGGVLLDRNWVLTAAHCYVDQY 47

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
               P  LQ V + ++ N  C  +Y      + + ++ +CAG   G  D+C
Sbjct: 140 RWQKPDDLQCVFITLLPNENCAKVYL-----QKVTDVMLCAGEMGGGKDTC 185

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score =  127 bits (321), Expect = 2e-33
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 22/155 (14%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      PWQ+++          +CG  L +  W +TAAHC+      D  + LG
Sbjct: 1   IIGGWECEKHSKPWQVAVYHQGH----FQCGGVLVHPQWVLTAAHCM----SDDYQIWLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPR-----------TFEYDLALLRFYEPVKFQP 499
            H+LS +E+    Q  +V      PQFD                +DL LLR  +P +   
Sbjct: 53  RHNLSKDEDT--AQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITD 110

Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
            +  + +P  +   +G++ + +GWG +     R S
Sbjct: 111 AVKILDLPTQEPK-LGSTCYTSGWGLISTFTNRGS 144

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score = 65.3 bits (160), Expect = 5e-12
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG +      PWQ+++          +CG  L +  W +TAAHC+ D +
Sbjct: 1   IIGGWECEKHSKPWQVAVYHQGH----FQCGGVLVHPQWVLTAAHCMSDDY 47

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
                  LQ V + + +N  C   Y      E + E  +CA  R  S   C
Sbjct: 140 TNRGSGTLQCVELRLQSNEKCARAYP-----EKMTEFVLCATHRDDSGSIC 185

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score =  125 bits (317), Expect = 7e-33
 Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 23/156 (14%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      PWQ +L  +       +CG  L +  W +TAAHC+      +  L LG
Sbjct: 1   IVGGWECEQHSQPWQAALYHFST----FQCGGILVHRQWVLTAAHCI----SDNYQLWLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRT-----------FEYDLALLRFYEPV-KFQ 498
            H+L  +E     Q   V     HP F+              + +DL LLR  EP     
Sbjct: 53  RHNLFDDENT--AQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTIT 110

Query: 499 PNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
             +  + +P ++   VG++   +GWG +    F   
Sbjct: 111 DAVKVVELPTEEPE-VGSTCLASGWGSIEPENFSFP 145

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score = 67.6 bits (166), Expect = 7e-13
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           IVGG +      PWQ +L  +       +CG  L +  W +TAAHC+ D +
Sbjct: 1   IVGGWECEQHSQPWQAALYHFST----FQCGGILVHRQWVLTAAHCISDNY 47

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           +   P  LQ V + ++ N  C+  +      + + +  +C G  +G  D+C
Sbjct: 141 NFSFPDDLQCVDLKILPNDECKKAHV-----QKVTDFMLCVGHLEGGKDTC 186

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score =  127 bits (319), Expect = 2e-30
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 32/198 (16%)

Query: 361 IDESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKC 420
           ++   ++  Q I+ S    +CG            +   + K PWQ  +     S     C
Sbjct: 433 MENLEDVFYQMIDESQSLSLCGMV------WEHRKGTDYHKQPWQAKISVIRPSKGHESC 486

Query: 421 GAALFNENWAVTAAHCVE-DVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD- 478
             A+ +E + +TAAHC   D     + + +G             ++  +++V  HP ++ 
Sbjct: 487 MGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK----------RDLEIEVVLFHPNYNI 536

Query: 479 --------PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF------VGTSAHVTGWG 524
                   P  ++YD+AL++    +K+   I PIC+P  +           T+       
Sbjct: 537 NGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEE 596

Query: 525 RLYEGRFRRSYGHPATRQ 542
            L     +  +     ++
Sbjct: 597 LLPAQDIKALFVSEEEKK 614

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 64.7 bits (157), Expect = 6e-11
 Identities = 13/50 (26%), Positives = 20/50 (40%)

Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
                +   + K PWQ  +     S     C  A+ +E + +TAAHC   
Sbjct: 456 VWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV 505

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score =  113 bits (285), Expect = 2e-26
 Identities = 48/151 (31%), Positives = 62/151 (41%), Gaps = 13/151 (8%)

Query: 381 CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV 440
                    R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E  
Sbjct: 552 QVEPKKCPGRVVGGCVAHPHSWPWQVSLRTR---FGMHFCGGTLISPEWVLTAAHCLEKS 608

Query: 441 P-PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQP 499
           P PS   + LG H     E     QE  V  +   P         D+ALL+   P     
Sbjct: 609 PRPSSYKVILGAHQEVNLEP--HVQEIEVSRLFLEPTR------KDIALLKLSSPAVITD 660

Query: 500 NIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
            +IP C+P  +      T   +TGWG     
Sbjct: 661 KVIPACLPSPNYVVADRTECFITGWGETQGT 691

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score = 54.3 bits (130), Expect = 1e-07
 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
               R+VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E 
Sbjct: 557 KCPGRVVGGCVAHPHSWPWQVSLRTR---FGMHFCGGTLISPEWVLTAAHCLEK 607

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score = 47.4 bits (112), Expect = 2e-05
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
                    +L+E  +PVI N +C       G    +    +CAG   G  DSC+
Sbjct: 687 ETQGTFGAGLLKEAQLPVIENKVCNRYEFLNG---RVQSTELCAGHLAGGTDSCQ 738

>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A Length = 80

 Score = 89.5 bits (223), Expect = 5e-22
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 10/89 (11%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      PWQ+++  +       +CG  L N  W +TAAHC       +  + LG
Sbjct: 1   IIGGRECEKNSHPWQVAIYHYSS----FQCGGVLVNPKWVLTAAHCK----NDNYEVWLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP 479
            H+L   E     Q   V     HP F+ 
Sbjct: 53  RHNLFENENT--AQFFGVTADFPHPGFNL 79

>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A Length = 80

 Score = 64.5 bits (158), Expect = 3e-13
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG +      PWQ+++  +       +CG  L N  W +TAAHC  D +
Sbjct: 1   IIGGRECEKNSHPWQVAIYHYSS----FQCGGVLVNPKWVLTAAHCKNDNY 47

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B Length = 152

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 478 DPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSY 535
           D + + +DL LLR   P K    +  + +P  +    G++   +GWG +  G     +
Sbjct: 2   DGKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPEL-GSTCEASGWGSIEPGPDDFEF 58

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B Length = 152

 Score = 50.2 bits (121), Expect = 2e-07
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
           D   P  +Q V + ++ N+ C   +      + + E  +CAG+  G  D+C
Sbjct: 55  DFEFPDEIQCVQLTLLQNTFCADAHP-----DKVTESMLCAGYLPGGKDTC 100

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A Length = 215

 Score = 58.5 bits (141), Expect = 9e-10
 Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 14/130 (10%)

Query: 400 GKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV----PPSDLLLRLGEHDLS 455
              P+               C   L   N  +T  HCV +       +   +  G +D  
Sbjct: 15  RVAPYNSIAYITFGG---SSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMND-- 69

Query: 456 TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVG 515
                 G      +        +    +YD A+++    +        I      TN  G
Sbjct: 70  -STAVNG-SANMTEFYVPSGYINTGASQYDFAVIKTDTNIGNTVGYRSI---RQVTNLTG 124

Query: 516 TSAHVTGWGR 525
           T+  ++G+  
Sbjct: 125 TTIKISGYPG 134

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ... Length = 97

 Score = 51.0 bits (123), Expect = 3e-08
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
              P  LQ+ S+P+++N+ C+  +        I +  ICAG       SC
Sbjct: 1   ANTPDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSC 43

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 4e-06
 Identities = 76/522 (14%), Positives = 140/522 (26%), Gaps = 162/522 (31%)

Query: 213 HNTNHID------EHSSSTIEE--ETNMIGGGTAYGTSTTP-SLVTWTTVDEIPVIPPDR 263
           H+ +H+D      ++    I    E   +           P S+++   +D I +     
Sbjct: 2   HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 264 TRPPPLVTTIKAPPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYP--ET 321
           +    L  T+ +    +        + +V+  L        + N          Y    +
Sbjct: 62  SGTLRLFWTLLSKQEEMV-------QKFVEEVL--------RIN----------YKFLMS 96

Query: 322 TTTTEKTEPSPST---VYETSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYK 378
              TE+ +PS  T   + +   +   +   +     VS    +    ++           
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK--YNVSR---LQPYLKLRQ--------- 142

Query: 379 EVCGRRLFPSSRIV----GGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNEN--WAV 431
                 L P+  ++     G     GK      +      S  +        +    W +
Sbjct: 143 --ALLELRPAKNVLIDGVLG----SGKT----WVALDVCLSYKVQCK----MDFKIFW-L 187

Query: 432 TAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRF 491
              +C     P  +L  L    L  + +P  +  R     + H            A LR 
Sbjct: 188 NLKNCNS---PETVLEML--QKLLYQIDP-NWTSR-----SDHSSNIKLRIHSIQAELRR 236

Query: 492 YEPVKFQPN---IIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW 548
               K   N   ++       +         V                        A  W
Sbjct: 237 LLKSKPYENCLLVL------LN---------V--QN--------------------AKAW 259

Query: 549 NHF-LGNRILFPSSR------IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENW 601
           N F L  +IL  ++R       +     T       ISL      T       +L    +
Sbjct: 260 NAFNLSCKILL-TTRFKQVTDFLSAATTT------HISLDH-HSMTLTPDEVKSLL-LKY 310

Query: 602 AVTAAHCVEDLWSQ---IIPI--------IQNCRRRESNLWKMALADGPLPSVLQEVSVP 650
                   +DL  +     P         I++      N WK    D  L +++ E S+ 
Sbjct: 311 LDCR---PQDLPREVLTTNPRRLSIIAESIRDGLATWDN-WKHVNCD-KLTTII-ESSLN 364

Query: 651 VINNSLCETMYRAAG-FIE--HIPEIFICAGWRKGSFDSCEE 689
           V+  +    M+     F    HIP I +   W          
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV 406

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	697
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	100.0
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	100.0
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	100.0
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	100.0
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	100.0
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	100.0
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	100.0
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	100.0
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	100.0
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	100.0
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	100.0
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	100.0
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	100.0
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	100.0
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	100.0
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	100.0
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	100.0
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	100.0
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	100.0
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	100.0
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	100.0
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	100.0
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	100.0
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	100.0
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	100.0
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	100.0
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	100.0
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	100.0
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	100.0
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	100.0
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	100.0
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	100.0
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	100.0
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	100.0
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	100.0
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	100.0
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	100.0
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	100.0
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	100.0
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	100.0
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	100.0
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	100.0
1aut_C	250	Activated protein C; serine proteinase, plasma cal	100.0
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	100.0
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	100.0
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	100.0
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	100.0
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	100.0
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	100.0
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	100.0
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	100.0
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	100.0
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	100.0
1md8_A	329	C1R complement serine protease; innate immunity, a	100.0
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	100.0
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	100.0
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	100.0
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	100.0
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	100.0
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	100.0
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	100.0
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	100.0
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	100.0
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	100.0
2aiq_A	231	Protein C activator; snake venom serine proteinase	100.0
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	100.0
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	100.0
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	100.0
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	100.0
1a7s_A	225	Heparin binding protein; serine protease homolog,	100.0
1elv_A	333	Complement C1S component; trypsin-like serin prote	100.0
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	100.0
1gpz_A	399	Complement C1R component; hydrolase, activation, i	100.0
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	100.0
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	100.0
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	100.0
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	100.0
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	100.0
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	100.0
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	100.0
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	100.0
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	100.0
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	100.0
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	100.0
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	100.0
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	100.0
2xrc_A	565	Human complement factor I; immune system, hydrolas	100.0
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	100.0
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	100.0
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	99.97
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	99.97
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	99.97
3hrz_D	741	Complement factor B; serine protease, glycosilated	99.96
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	99.94
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	99.9
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	99.84
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	99.83
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	99.82
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	99.81
2pka_A	80	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	99.81
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	99.79
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	99.77
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	99.77
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	99.77
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	99.73
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	99.38
3k6y_A	237	Serine protease, possible membrane-associated seri	99.38
2pka_A	80	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	99.3
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	99.27
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	99.18
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	99.16
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	99.13
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	99.11
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	99.1
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	99.09
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	99.07
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	99.06
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	99.05
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	99.05
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	99.04
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	99.04
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	99.03
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	99.02
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	99.02
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	99.01
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	99.01
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	99.01
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	99.0
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	99.0
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	99.0
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	99.0
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	98.99
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	98.99
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	98.99
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	98.99
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	98.99
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	98.99
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	98.98
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	98.98
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	98.98
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	98.98
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	98.98
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	98.98
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	98.97
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	98.97
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	98.97
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	98.97
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	98.97
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	98.97
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	98.97
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	98.97
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	98.97
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	98.96
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	98.96
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	98.96
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	98.96
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	98.96
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	98.96
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	98.96
1a7s_A	225	Heparin binding protein; serine protease homolog,	98.96
1aut_C	250	Activated protein C; serine proteinase, plasma cal	98.96
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	98.95
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	98.95
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	98.95
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	98.95
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	98.95
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	98.95
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	98.95
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	98.95
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	98.94
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	98.94
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	98.94
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	98.94
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	98.94
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	98.93
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	98.93
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	98.93
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	98.93
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	98.93
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	98.92
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	98.92
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	98.92
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	98.92
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	98.92
2aiq_A	231	Protein C activator; snake venom serine proteinase	98.92
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	98.91
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	98.91
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	98.91
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	98.9
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	98.88
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	98.87
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	98.87
1elv_A	333	Complement C1S component; trypsin-like serin prote	98.87
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	98.87
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	98.86
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	98.86
1md8_A	329	C1R complement serine protease; innate immunity, a	98.85
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	98.85
1gpz_A	399	Complement C1R component; hydrolase, activation, i	98.84
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	98.83
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	98.81
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	98.79
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	98.77
2xrc_A	565	Human complement factor I; immune system, hydrolas	98.72
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	98.71
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	98.64
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	98.64
3sti_A	245	Protease DEGQ; serine protease, PDZ domain, chaper	98.6
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	98.6
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	98.59
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.58
3hrz_D	741	Complement factor B; serine protease, glycosilated	98.46
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	98.4
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	98.27
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	98.06
1hpg_A	187	Glutamic acid specific protease; serine protease,	98.03
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	98.03
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	98.01
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	98.01
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	98.01
3stj_A	345	Protease DEGQ; serine protease, PDZ domain, protea	97.97
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	97.88
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	97.72
4a8c_A	436	Periplasmic PH-dependent serine endoprotease DEGQ;	97.68
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	97.67
3pv2_A	451	DEGQ; trypsin fold, PDZ domain, chaperone protease	97.41
1ky9_A	448	Protease DO, DEGP, HTRA; protein quality control,	97.05
2ea3_A	189	Chymotrypsin; celloulomonas, protease, hydrolase;	96.9
2w5e_A	163	Putative serine protease; coiled coil, transmembra	96.12
2pfe_A	186	Protease A, alkaline serine protease, TFPA; beta-b	95.41
2oua_A	188	Serine protease, protein NAPA; kinetic stability,	94.74
3k6y_A	237	Serine protease, possible membrane-associated seri	94.18
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	94.03
1zyo_A	191	Serine protease; beta-barrel, glutamyl endopeptida	93.17
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	92.66
4fln_A	539	Protease DO-like 2, chloroplastic; protease, DEG,	92.39
2h5c_A	198	Alpha-lytic protease; serine protease, acylation t	92.16
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	91.34
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	90.99
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	90.36
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	88.64
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	88.0
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	84.53
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	82.9
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	82.06

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=100.00  E-value=2.3e-39  Score=331.46  Aligned_cols=205  Identities=28%  Similarity=0.532  Sum_probs=167.6

Q ss_pred             cccCCCcCCCCCCeeCCeeCCCCCcceEEEEEEEecCC-ceeeeeEEEeeCcceeeecccccCC----CCCceEEEEccc
Q psy12777        378 KEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRST-YLHKCGAALFNENWAVTAAHCVEDV----PPSDLLLRLGEH  452 (697)
Q Consensus       378 ~~~CG~~~~~~~RIVGG~~A~~GewPW~VsL~~~~~~~-~~~~CGGTLIS~rwVLTAAHC~~~~----~~~~l~V~LG~~  452 (697)
                      ...||.+.. ..||+||.+|..++|||||+|++....+ ..++|||+||+++||||||||+.+.    ....+.|++|.+
T Consensus        11 ~~~CG~~~~-~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~   89 (278)
T 2olg_A           11 PNDCGYQVE-ADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGEW   89 (278)
T ss_dssp             CSSCSCCCC-CCCSCCSSBCCTTSSTTEEEEEEECTTCCEEEEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESCS
T ss_pred             hhHhCCCCC-CCceECCEECCCCCCCceEEEEEecCCCCcceeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCcc
Confidence            457998642 6799999999999999999998753322 3689999999999999999999642    124578999998


Q ss_pred             cCCCCCC---------CCCcEEEEEEEEEECCCCCCCCC--CCceEEEecCcccccCCCeeeeecCCCCCC-CCCCEEEE
Q psy12777        453 DLSTEEE---------PYGYQERRVQIVASHPQFDPRTF--EYDLALLRFYEPVKFQPNIIPICVPEDDTN-FVGTSAHV  520 (697)
Q Consensus       453 dl~~~~~---------~~~~q~~~V~~IiiHP~Yn~~t~--~nDIALLrL~~PV~fs~~V~PICLP~~~~~-~~G~~c~V  520 (697)
                      ++....+         ....+.+.|.++++||+|+....  .||||||||++|+.|+++|+|||||..... ..+..|++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v  169 (278)
T 2olg_A           90 NTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTV  169 (278)
T ss_dssp             BTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEE
T ss_pred             cCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEE
Confidence            8765432         11357889999999999987664  799999999999999999999999987643 36899999


Q ss_pred             EeccccCCCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCc
Q psy12777        521 TGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNEN  600 (697)
Q Consensus       521 tGWG~t~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~  600 (697)
                      +|||.+..+                                                                       
T Consensus       170 ~GWG~t~~~-----------------------------------------------------------------------  178 (278)
T 2olg_A          170 VGWGRTETG-----------------------------------------------------------------------  178 (278)
T ss_dssp             EESCCSSSC-----------------------------------------------------------------------
T ss_pred             EcCCcCCCC-----------------------------------------------------------------------
Confidence            999998652                                                                       


Q ss_pred             EEEeecccccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeC
Q psy12777        601 WAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWR  680 (697)
Q Consensus       601 ~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~  680 (697)
                                                            ..+..||++.|+++++++|+..|...+  ..+.++||||+..
T Consensus       179 --------------------------------------~~~~~l~~~~~~i~~~~~C~~~~~~~~--~~~~~~~~Ca~~~  218 (278)
T 2olg_A          179 --------------------------------------QYSTIKQKLAVPVVHAEQCAKTFGAAG--VRVRSSQLCAGGE  218 (278)
T ss_dssp             --------------------------------------CCCSBCEEEEEEBCCGGGGGGGGSSTT--CCCCTTEEEECCT
T ss_pred             --------------------------------------CccchhhcccccccCHHHHHHHhcccc--ccCCCceEeeecC
Confidence                                                  246789999999999999998875322  2578999999964


Q ss_pred             CCCCCCCcccCCCCC
Q psy12777        681 KGSFDSCEEHARDGT  695 (697)
Q Consensus       681 ~g~~dtCqGDSGgg~  695 (697)
                       .+.|+|+|||||++
T Consensus       219 -~~~~~C~GDSGGPL  232 (278)
T 2olg_A          219 -KAKDSCGGDSGGPL  232 (278)
T ss_dssp             -TCTTCCCCCTTCEE
T ss_pred             -CCCeeCCCccCcce
Confidence             46899999999987

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=100.00  E-value=1.5e-39  Score=328.61  Aligned_cols=200  Identities=33%  Similarity=0.634  Sum_probs=166.7

Q ss_pred             CCCcCC---CCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCC
Q psy12777        381 CGRRLF---PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTE  457 (697)
Q Consensus       381 CG~~~~---~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~  457 (697)
                      ||.+..   ...||+||.+|..++|||||+|++.......++|||+||+++||||||||+.+  ...+.|++|.+++...
T Consensus         1 cg~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~   78 (251)
T 1pyt_D            1 CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISN--TLTYRVALGKNNLEVE   78 (251)
T ss_dssp             CCCCSSCCCSSSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT--TCCEEEEESCSBTTCS
T ss_pred             CCCCccCCccCCccCCCEECCCCCCCceEEEEEEcCCCcceEEEeEEecCCEEEECHHHhCC--CceEEEEEcccccccC
Confidence            665543   24699999999999999999998754334578999999999999999999974  5678999999987643


Q ss_pred             CCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCC
Q psy12777        458 EEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYG  536 (697)
Q Consensus       458 ~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~  536 (697)
                      .+. ..+.+.|.++++||+|+...+.||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..        
T Consensus        79 ~~~-~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~--------  149 (251)
T 1pyt_D           79 DEA-GSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYT--------  149 (251)
T ss_dssp             CCS-SCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSC--------
T ss_pred             CCC-CcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCC--------
Confidence            322 4578899999999999988899999999999999999999999999876433 588999999999865        


Q ss_pred             CCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccce
Q psy12777        537 HPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQI  616 (697)
Q Consensus       537 ~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~  616 (697)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (251)
T 1pyt_D          150 --------------------------------------------------------------------------------  149 (251)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        617 IPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       617 i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                          ++..+..||++.+++++.++|+..+.+   ...+.+.||||+. .++.++|+||||||+
T Consensus       150 --------------------~~~~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL  204 (251)
T 1pyt_D          150 --------------------NGPIAAELQQGLQPVVDYATCSQRDWW---GTTVKETMVCAGG-DGVISACNGDSGGPL  204 (251)
T ss_dssp             --------------------CSCCCSBCBCCEEECBCHHHHTSTTTT---TTTCCTTEEEECC-SCSSCCCCSCTTCEE
T ss_pred             --------------------CCCcccchheeEeEeeCHHHcchhhcc---CCCcCCCeEEecC-CCCCccCCCCCCCce
Confidence                                234467899999999999999976532   2357899999995 567899999999987

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=100.00  E-value=5.8e-39  Score=321.45  Aligned_cols=192  Identities=26%  Similarity=0.441  Sum_probs=162.1

Q ss_pred             CCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccC-CCCCceEEEEccccCCCCCCCCCcEEEE
Q psy12777        389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED-VPPSDLLLRLGEHDLSTEEEPYGYQERR  467 (697)
Q Consensus       389 ~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~-~~~~~l~V~LG~~dl~~~~~~~~~q~~~  467 (697)
                      .||+||.++..++|||||+|++    ++.++|||+||+++||||||||+.. .....+.|++|.+++.....  ..+.+.
T Consensus         1 ~rIvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~--~~~~~~   74 (240)
T 1mza_A            1 MEIIGGKEVSPHSRPFMASIQY----GGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEA--SKQTLE   74 (240)
T ss_dssp             CCCCCCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCT--TCEEEE
T ss_pred             CceECCEECCCCCCCeEEEEee----CCceEEEEEEecCCEEEECHHhCCCCCCCCCeEEEeCceecCCCCC--ceEEEE
Confidence            3899999999999999999986    3478999999999999999999864 23567899999998765433  358899


Q ss_pred             EEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        468 VQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       468 V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      |.++++||+|+...+.||||||||++++.|+++|+|||||.......+..|+++|||.+..+                  
T Consensus        75 v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~------------------  136 (240)
T 1mza_A           75 IKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPD------------------  136 (240)
T ss_dssp             EEEEEECCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTT------------------
T ss_pred             EEEEEeCCCccCCCCCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCC------------------
Confidence            99999999999888999999999999999999999999998543346999999999998762                  


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       137 --------------------------------------------------------------------------------  136 (240)
T 1mza_A          137 --------------------------------------------------------------------------------  136 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHH--HHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCE--TMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~--~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                               ....+..||++.|+++++++|+  ..|..   ...+.++||||+...++.++|+||||||+.
T Consensus       137 ---------~~~~~~~L~~~~~~i~~~~~C~~~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~  195 (240)
T 1mza_A          137 ---------SLRPSDTLREVTVTVLSRKLCNSQSYYNG---DPFITKDMVCAGDAKGQKDSCKGDAGGPLI  195 (240)
T ss_dssp             ---------CSSCCSBCEEEEEEECCHHHHTSTTTTTT---TTCCCTTEEEEECTTSCCCCCTTCTTCEEE
T ss_pred             ---------CCCccccceEeEEEEeCHHHcCCcceeCC---CCcCCCCeEeecCCCCCCccCCCCCCCeeE
Confidence                     1124678999999999999998  44421   125789999999766788999999999873

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=100.00  E-value=8.6e-39  Score=320.08  Aligned_cols=190  Identities=37%  Similarity=0.663  Sum_probs=161.1

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC---CCCceEEEEccccCCCCCCCCCcEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV---PPSDLLLRLGEHDLSTEEEPYGYQERR  467 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~---~~~~l~V~LG~~dl~~~~~~~~~q~~~  467 (697)
                      |+||.+|..++|||||+|++....+..++|||+||+++||||||||+.+.   ....+.|++|.+++.....  ..+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~--~~~~~~   78 (237)
T 2f91_A            1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEG--SEQIIT   78 (237)
T ss_dssp             CBSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCS--CCEEEE
T ss_pred             CCCccCCCCCCCCcEEEEEEecCCCCcceEEEEEeeCCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCC--ccEEEE
Confidence            78999999999999999986432222234999999999999999999764   3567899999988764332  358899


Q ss_pred             EEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        468 VQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       468 V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      |.++++||+|+...+.||||||||++|+.|+++|+|||||.... ..+..|+++|||.+..                   
T Consensus        79 v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~-~~~~~~~v~GwG~~~~-------------------  138 (237)
T 2f91_A           79 VSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGH-TATGDVIVTGWGTTSE-------------------  138 (237)
T ss_dssp             EEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTC-CCCSEEEEEESCCSST-------------------
T ss_pred             EEEEEECCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCCCC-CCCCcEEEEECCcCCC-------------------
Confidence            99999999999888999999999999999999999999997655 3688999999999876                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       139 --------------------------------------------------------------------------------  138 (237)
T 2f91_A          139 --------------------------------------------------------------------------------  138 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               .+..+..||++.++++++++|+..|..    ..+.+.||||+...++.++|+||||||+
T Consensus       139 ---------~~~~~~~L~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  193 (237)
T 2f91_A          139 ---------GGNTPDVLQKVTVPLVSDEDCRADYGA----DEILDSMICAGVPEGGKDSCQGDSGGPL  193 (237)
T ss_dssp             ---------TCCCCSBCEEEEEEEECHHHHHHHHCT----TTSCTTEEEECCTTCCCBCCTTCTTCEE
T ss_pred             ---------CCCccceeeEEEEeEcCHHHhhhhhCC----CCcCCCeEEEecCCCCCCCCCCcCCCCe
Confidence                     234568899999999999999988741    2478999999977778899999999987

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=100.00  E-value=4.1e-39  Score=349.49  Aligned_cols=210  Identities=29%  Similarity=0.550  Sum_probs=172.6

Q ss_pred             ccCCCcCCC--CCCeeCC-eeCCCCCcceEEEEEEEecC----CceeeeeEEEeeCcceeeecccccCCCC--CceEEEE
Q psy12777        379 EVCGRRLFP--SSRIVGG-EKATFGKWPWQISLRQWIRS----TYLHKCGAALFNENWAVTAAHCVEDVPP--SDLLLRL  449 (697)
Q Consensus       379 ~~CG~~~~~--~~RIVGG-~~A~~GewPW~VsL~~~~~~----~~~~~CGGTLIS~rwVLTAAHC~~~~~~--~~l~V~L  449 (697)
                      ..||.+...  ..||+|| .+|..++|||||+|++....    ...++|||+||+++||||||||+.....  ..+.|++
T Consensus       116 ~~CG~~~~~~~~~rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~  195 (394)
T 2b9l_A          116 SFCGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRA  195 (394)
T ss_dssp             CCTTBCCTTCSSCEEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEE
T ss_pred             CCCCCCCCCCCCceeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecCCCCCcccEEEEe
Confidence            469976532  4599999 89999999999999864321    2468999999999999999999976433  6789999


Q ss_pred             ccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCC
Q psy12777        450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEG  529 (697)
Q Consensus       450 G~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g  529 (697)
                      |.+++....+....+.+.|+++++||+|+...+.||||||||++|+.|+++|+|||||.....+.+..|+++|||.+..+
T Consensus       196 G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~  275 (394)
T 2b9l_A          196 GEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFG  275 (394)
T ss_dssp             SCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTT
T ss_pred             ceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCC
Confidence            99988665443346889999999999999988999999999999999999999999998766556889999999998762


Q ss_pred             CccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccc
Q psy12777        530 RFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV  609 (697)
Q Consensus       530 ~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~  609 (697)
                      .                                                                               
T Consensus       276 ~-------------------------------------------------------------------------------  276 (394)
T 2b9l_A          276 S-------------------------------------------------------------------------------  276 (394)
T ss_dssp             C-------------------------------------------------------------------------------
T ss_pred             C-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             cccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhC--CcccCcCCCeEEEeeCCCCCCCC
Q psy12777        610 EDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAA--GFIEHIPEIFICAGWRKGSFDSC  687 (697)
Q Consensus       610 ~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~--~~~~~i~~~~ICAG~~~g~~dtC  687 (697)
                                                 .+..+..||++.|+++++++|+..|...  +....+.+.|||||.. ++.|+|
T Consensus       277 ---------------------------~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~-~g~d~C  328 (394)
T 2b9l_A          277 ---------------------------RHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGE-QGKDTC  328 (394)
T ss_dssp             ---------------------------TTSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCB-SSCSCC
T ss_pred             ---------------------------CCcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEeeCC-CCCcCC
Confidence                                       2345789999999999999999987532  1123578999999953 468999


Q ss_pred             cccCCCCC
Q psy12777        688 EEHARDGT  695 (697)
Q Consensus       688 qGDSGgg~  695 (697)
                      +|||||+|
T Consensus       329 ~GDSGGPL  336 (394)
T 2b9l_A          329 TGDGGSPL  336 (394)
T ss_dssp             SSCTTCEE
T ss_pred             CCCcchhh
Confidence            99999987

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=100.00  E-value=1.2e-38  Score=317.28  Aligned_cols=188  Identities=39%  Similarity=0.756  Sum_probs=162.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC------CCCceEEEEccccCCCCCCCCCcE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV------PPSDLLLRLGEHDLSTEEEPYGYQ  464 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~------~~~~l~V~LG~~dl~~~~~~~~~q  464 (697)
                      |+||.++..++|||+|+|+..   +..++|||+||+++||||||||+.+.      ....+.|++|.++....... ..+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~---~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~-~~~   76 (241)
T 3ncl_A            1 VVGGTDADEGEWPWQVSLHAL---GQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAP-GVQ   76 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEET---TTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTST-TCE
T ss_pred             CCCCeECCCCCCCcEEEEEcC---CCceEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCC-Cce
Confidence            789999999999999999752   34589999999999999999999653      34568999999887654332 468


Q ss_pred             EEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccc
Q psy12777        465 ERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQE  543 (697)
Q Consensus       465 ~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~  543 (697)
                      .+.|.++++||+|+...+.||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..+              
T Consensus        77 ~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~--------------  142 (241)
T 3ncl_A           77 ERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYG--------------  142 (241)
T ss_dssp             EEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTT--------------
T ss_pred             EEEEEEEEECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCC--------------
Confidence            8999999999999999999999999999999999999999999876544 6899999999998762              


Q ss_pred             ccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecc
Q psy12777        544 MATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNC  623 (697)
Q Consensus       544 s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~  623 (697)
                                                                                                      
T Consensus       143 --------------------------------------------------------------------------------  142 (241)
T 3ncl_A          143 --------------------------------------------------------------------------------  142 (241)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        624 RRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       624 ~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                    +..+..||++.++++++++|+..+.     ..+.+.||||+...++.++|+|||||++
T Consensus       143 --------------~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl  195 (241)
T 3ncl_A          143 --------------GTGALILQKGEIRVINQTTCENLLP-----QQITPRMMCVGFLSGGVDSCQGDSGGPL  195 (241)
T ss_dssp             --------------SCBCSBCEEEEEEECCHHHHHHHST-----TTCCTTEEEEECTTCSSBCCTTCTTCEE
T ss_pred             --------------CCcCceeeEEeEEEECHHHhhhhcc-----cCCCCCeEEeCCCCCCCccCCCcCCCCE
Confidence                          3346789999999999999998774     3588999999987888999999999986

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=100.00  E-value=1.6e-38  Score=320.50  Aligned_cols=185  Identities=34%  Similarity=0.671  Sum_probs=158.1

Q ss_pred             CCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       389 ~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      .||+||.+|..++|||+|+|+..   .+.++|||+||+++||||||||+..   ..+.|++|.+++....+  ..+.+.|
T Consensus        14 ~rIvgG~~a~~~~~Pw~v~l~~~---~~~~~CgGtLI~~~~VLTAAHC~~~---~~~~v~~G~~~~~~~~~--~~~~~~v   85 (245)
T 1t8o_A           14 SRIVNGEEAVPGSWPWQVSLQDK---TGFHFCGGSLINENWVVTAAHCGVT---TSDVVVAGEFDQGSSSE--KIQKLKI   85 (245)
T ss_dssp             --CBTCEECCTTSSTTEEEEECT---TCCEEEEEEEEETTEEEECGGGCCC---TTSEEEESCSBTTCSSS--CCEEEEE
T ss_pred             CceECCEECCCCCCCceEEEEcC---CCCeEEEEEEeeCCEEEEcHHhCcC---CCcEEEEeeeecCCCCC--CcEEEEE
Confidence            59999999999999999999752   2468999999999999999999975   45789999988765433  4688999


Q ss_pred             EEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        469 QIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       469 ~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      .++++||+|+...+.||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..+                  
T Consensus        86 ~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~------------------  147 (245)
T 1t8o_A           86 AKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYT------------------  147 (245)
T ss_dssp             EEEEECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC-------------------
T ss_pred             EEEEeCCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCC------------------
Confidence            999999999998999999999999999999999999999876443 6899999999998762                  


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       148 --------------------------------------------------------------------------------  147 (245)
T 1t8o_A          148 --------------------------------------------------------------------------------  147 (245)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               ....+..||++.++++++++|++.|.     ..+.+.||||+  .++.++|+|||||++
T Consensus       148 ---------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~--~~~~~~C~GDSGgPL  199 (245)
T 1t8o_A          148 ---------NANTPDRLQQASLPLLSNTNCKKYWG-----TKIKDAMICAG--ASGVSSCMGDSGGPL  199 (245)
T ss_dssp             ----------CCCCSBCEEEEEEEECHHHHHHHHG-----GGCCTTEEEEE--CSSCBCCTTCTTCEE
T ss_pred             ---------CCCCcchheEEEEeeEcchhhhHhhc-----CcCCCceEEcc--CCCCccCcccCcCCE
Confidence                     12356789999999999999999774     24789999999  456899999999987

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=100.00  E-value=1.2e-38  Score=320.26  Aligned_cols=189  Identities=32%  Similarity=0.612  Sum_probs=160.1

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|++...+...++|||+||+++||||||||+..  ...+.|++|.+++...+.  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~~~--~~~~~~v~~   76 (241)
T 1bru_P            1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS--SRTYRVVLGRHSLSTNEP--GSLAVKVSK   76 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT--TSCEEEEESCSBSSSCCT--TCEEEEEEE
T ss_pred             CCCCeECCCCCcCcEEEEEEecCCceeeEEEeEEeeCCEEEEcHHhccc--CCceEEEEEcccccCCCC--ccEEEEEEE
Confidence            7899999999999999998753333368999999999999999999973  467899999988765433  468899999


Q ss_pred             EEECCCCCCCCCC--CceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQFDPRTFE--YDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Yn~~t~~--nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +++||+|+...+.  ||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..                   
T Consensus        77 i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~-------------------  137 (241)
T 1bru_P           77 LVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQT-------------------  137 (241)
T ss_dssp             EEECTTCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSST-------------------
T ss_pred             EEECCCCCCCCCCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCC-------------------
Confidence            9999999987776  999999999999999999999999876433 589999999999865                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (241)
T 1bru_P          138 --------------------------------------------------------------------------------  137 (241)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               .+..+..||++.+++++.++|++.+.+   ...+.++||||+ ..++.++|+||||||+
T Consensus       138 ---------~~~~~~~L~~~~~~i~~~~~C~~~~~~---~~~~~~~~~Ca~-~~~~~~~C~GDSGgPL  192 (241)
T 1bru_P          138 ---------NGASPDILQQGQLLVVDYATCSKPGWW---GSTVKTNMICAG-GDGIISSCNGDSGGPL  192 (241)
T ss_dssp             ---------TSCCCSBCEEEEEEEECHHHHTSTTTT---GGGCCTTEEEEC-CSSSSBCCTTCTTCEE
T ss_pred             ---------CCCCCccceeCEEEEecHHHhCccccc---CCcCCCceEeec-CCCCCccCCCCCCCcE
Confidence                     234467899999999999999986432   235789999999 4567899999999987

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=100.00  E-value=7.9e-40  Score=349.44  Aligned_cols=203  Identities=28%  Similarity=0.460  Sum_probs=162.8

Q ss_pred             CCCccccCCCcCCC---CCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEc
Q psy12777        374 MSNYKEVCGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG  450 (697)
Q Consensus       374 ~s~~~~~CG~~~~~---~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG  450 (697)
                      .+.+...||++..+   ..||+||.+|..++|||||+|+.    ...|+|||+||+++||||||||+.........+..+
T Consensus        83 lp~C~p~CG~p~~~~~~~~RIvGG~~a~~g~~Pw~v~l~~----~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~  158 (347)
T 4f4o_C           83 LPECEAVCGKPKNPVDQVQRIMGGSLDAKGSFPWQAKMIS----HHNLTSGATLINEQWLLTTAKNLRLGHKNDTKAKDI  158 (347)
T ss_dssp             CCEEEECCSCCSSCC-----CCSCCBCCSCCCTTCEEEEC----TTCCEEECCBCSSSEEEECHHHHTTTSCTTCCHHHH
T ss_pred             CCCccCCCCCCCCCCCCCCeEECCEECCCCCCCcEEEEEe----CCCEEEEEEEEcCCEEEeCcccccCCCCCcceEEee
Confidence            34556789986543   57999999999999999999975    356899999999999999999997544444444444


Q ss_pred             cccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCC
Q psy12777        451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGR  530 (697)
Q Consensus       451 ~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~  530 (697)
                      ...+.....  ..+.+.|+++++||+|+    .||||||||++|+.|+++|+|||||..+....+..|+++|||.+..  
T Consensus       159 ~~~~~~~~~--~~~~~~V~~i~~HP~y~----~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~--  230 (347)
T 4f4o_C          159 APTLRLYVG--KKQEVEIEKVIFHPDNS----TVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNAN--  230 (347)
T ss_dssp             GGGCEEEET--TTEEECEEEEEECSCTT----TCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTT--
T ss_pred             eeeeeecCC--CeEEEEEEEEEECcCCC----CCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCC--
Confidence            443332221  35789999999999995    5899999999999999999999999877655799999999998765  


Q ss_pred             ccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        531 FRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       531 ~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                                                                                                      
T Consensus       231 --------------------------------------------------------------------------------  230 (347)
T 4f4o_C          231 --------------------------------------------------------------------------------  230 (347)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhC------------CcccCcCCCeEEEe
Q psy12777        611 DLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAA------------GFIEHIPEIFICAG  678 (697)
Q Consensus       611 ~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~------------~~~~~i~~~~ICAG  678 (697)
                                                 +..+..||++.|+++++++|++.|...            ++...++++|||||
T Consensus       231 ---------------------------~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG  283 (347)
T 4f4o_C          231 ---------------------------LNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAG  283 (347)
T ss_dssp             ---------------------------SSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEEC
T ss_pred             ---------------------------CCCCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEec
Confidence                                       234678999999999999999987532            12235789999999


Q ss_pred             eCCCCCCCCcccCCCCC
Q psy12777        679 WRKGSFDSCEEHARDGT  695 (697)
Q Consensus       679 ~~~g~~dtCqGDSGgg~  695 (697)
                      ...++.|+|+||||||+
T Consensus       284 ~~~~~~d~C~GDSGGPL  300 (347)
T 4f4o_C          284 LSKYQEDTCYGDAGSAF  300 (347)
T ss_dssp             CCTTCCCCCTTCTTCEE
T ss_pred             CCCCCCCCCCCCCCcce
Confidence            88889999999999986

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=100.00  E-value=1.8e-38  Score=316.57  Aligned_cols=190  Identities=32%  Similarity=0.628  Sum_probs=163.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|++..  ...++|||+||+++||||||||+.......+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~--~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~--~~~~~~v~~   76 (238)
T 1ym0_A            1 IVGGIEARPYEFPWQVSVRRKS--SDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAAST--VRQTHDVDS   76 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEEGG--GTEEEEEEEEEETTEEEECHHHHTTCCGGGEEEEESCSBTTSCCS--SCEEEEEEE
T ss_pred             CCCCEECCCCccCCEEEEEeCC--CCceEEEEEEeeCCEEEECHHhCCCCCCceEEEEEcccccCCCCC--CceEEEEEE
Confidence            7899999999999999998631  236899999999999999999998765678999999988765443  458899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++|+.|+++|+|||||.....+.+..|+++|||.+..+                     
T Consensus        77 i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~---------------------  135 (238)
T 1ym0_A           77 IFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSG---------------------  135 (238)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTT---------------------
T ss_pred             EEECCCCCCCCCcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCC---------------------
Confidence            99999999988999999999999999999999999998765457899999999998762                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       136 --------------------------------------------------------------------------------  135 (238)
T 1ym0_A          136 --------------------------------------------------------------------------------  135 (238)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCC--CCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGS--FDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~--~dtCqGDSGgg~  695 (697)
                            ....+..||++.++++++++|+..|..    ..+.++||||+...++  .++|+||||||+
T Consensus       136 ------~~~~~~~l~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL  192 (238)
T 1ym0_A          136 ------GVCCPAVLRYVTLNITTNAFCDAVYTS----DTIYDDMICATDNTGMTDRDSCQGDSGGPL  192 (238)
T ss_dssp             ------CCSCCSBCEEEEEEECCHHHHHHHCTT----SCCCTTEEEEECSSCSSSCBCCTTTTTCEE
T ss_pred             ------CCcCCccceEEEEEeeCHHHHhHhhcc----cccCCCeEEecCCCCCCcCccCCCccCCee
Confidence                  112367899999999999999988742    2578999999976555  899999999987

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=100.00  E-value=2.3e-38  Score=315.03  Aligned_cols=187  Identities=27%  Similarity=0.467  Sum_probs=159.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|++... +..++|||+||+++||||||||+.+    .+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~-~~~~~CgGtLI~~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~--~~~~~~v~~   73 (227)
T 1iau_A            1 IIGGHEAKPHSRPYMAYLMIWDQ-KSLKRCGGFLIRDDFVLTAAHCWGS----SINVTLGAHNIKEQEP--TQQFIPVKR   73 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEECS-SCEEEEEEEEEETTEEEECGGGCCS----EEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCeECCCCCcCcEEEEEEECC-CCceEEEEEEEcCCEEEECHHhCCC----ceEEEEccccccCCCC--ccEEEEEEE
Confidence            78999999999999999986432 2358999999999999999999963    5899999998765433  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+...+.||||||||++++.|+++++|||||.....+ .+..|+++|||.+..                     
T Consensus        74 i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~---------------------  132 (227)
T 1iau_A           74 PIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAP---------------------  132 (227)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSS---------------------
T ss_pred             EECCCCCCCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCC---------------------
Confidence            9999999998999999999999999999999999999876533 689999999999865                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       133 --------------------------------------------------------------------------------  132 (227)
T 1iau_A          133 --------------------------------------------------------------------------------  132 (227)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                             .+..+..||++.+++++.++|+..|..    ....+.||||+...++.++|+||||||+.
T Consensus       133 -------~~~~~~~L~~~~~~i~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~  188 (227)
T 1iau_A          133 -------LGKHSHTLQEVKMTVQEDRKCESDLRH----YYDSTIELCVGDPEIKKTSFKGDSGGPLV  188 (227)
T ss_dssp             -------SSCCCSBCEEEEEEBCCHHHHHHHTTT----TCCTTTEEEESCTTSCCBCCTTCTTSEEE
T ss_pred             -------CCCcCceeeEeeeeeechHHhhhHhcc----ccCCCcEEEeECCCCCCeeeecCCCchhe
Confidence                   234567899999999999999987742    12345699999777778999999999873

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=100.00  E-value=1.9e-38  Score=317.45  Aligned_cols=193  Identities=27%  Similarity=0.578  Sum_probs=163.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||+|+|+... +...++|||+||+++||||||||+.......+.|++|.+++....   ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~-~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~---~~~~~~v~~   76 (241)
T 1m9u_A            1 VIGGTNASPGEFPWQLSQQRQS-GSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTS---GTQTANVDS   76 (241)
T ss_dssp             CBTCEECCTTSSTTEEEEEEES-SSEEEEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCT---TCEEEEEEE
T ss_pred             CCCCeECCCCCcCeEEEEEecC-CceeeeeEEEEEeCCEEEecHHhCCCCCcceEEEEEEeecCCCCC---CceEEEEEE
Confidence            7899999999999999998742 234689999999999999999999876567899999998876532   358899999


Q ss_pred             EEECCCC--CCCCCCCceEEEecCcccccCCCeeeeecCCC-CCCCCCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQF--DPRTFEYDLALLRFYEPVKFQPNIIPICVPED-DTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Y--n~~t~~nDIALLrL~~PV~fs~~V~PICLP~~-~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +++||+|  +...+.||||||||++|+.|+++|+|||||.. ...+.+..|+++|||.+..                   
T Consensus        77 i~~hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~-------------------  137 (241)
T 1m9u_A           77 YTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDG-------------------  137 (241)
T ss_dssp             EEECTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSS-------------------
T ss_pred             EEeCCCcCCCCCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCC-------------------
Confidence            9999999  77778999999999999999999999999987 4334799999999999876                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (241)
T 1m9u_A          138 --------------------------------------------------------------------------------  137 (241)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                               .+..+..||++.++++++++|+..+.... ...+.++||||+...++.++|+||||||+.
T Consensus       138 ---------~~~~~~~L~~~~~~~~~~~~C~~~~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~  196 (241)
T 1m9u_A          138 ---------TNNLPDILQKSSIPVITTAQCTAAMVGVG-GANIWDNHICVQDPAGNTGACNGDSGGPLN  196 (241)
T ss_dssp             ---------SSCCCSBCEEEEEEBCCHHHHHHHHTTST-TCCCCTTEEEECCTTSCCBCCTTCTTCEEE
T ss_pred             ---------CCCcccceeEeeEEEEcHHHhhhhhcccC-CCcccCCcEEECcCCCCCeeecCcCCccEE
Confidence                     23456889999999999999998764211 113789999999767788999999999873

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=100.00  E-value=9.5e-39  Score=322.46  Aligned_cols=191  Identities=35%  Similarity=0.616  Sum_probs=162.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||.+|..++|||||+|+.    ++.++|||+||+++||||||||+.... ...+.|++|.+++.....  ..+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~--~~~~~~v~   74 (254)
T 2bz6_H            1 IVGGKVCPKGECPWQVLLLV----NGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDG--DEQSRRVA   74 (254)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCS--CCEEEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEe----CCCcEEEEEEecCCEEEECHHHcCCCCCcceEEEEECCcccCCCCC--CcEEEEEE
Confidence            78999999999999999984    347899999999999999999997643 356899999998865443  45889999


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC----CCCCCEEEEEeccccCCCCccccCCCCccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT----NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMA  545 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~----~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~  545 (697)
                      ++++||+|+.....||||||||++++.|+++|+|||||....    ...+..|+++|||.+..                 
T Consensus        75 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~-----------------  137 (254)
T 2bz6_H           75 QVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLD-----------------  137 (254)
T ss_dssp             EEEEETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSST-----------------
T ss_pred             EEEECCCCCCCCCcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCC-----------------
Confidence            999999999988999999999999999999999999997542    12488999999999865                 


Q ss_pred             ccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccc
Q psy12777        546 TCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRR  625 (697)
Q Consensus       546 ~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~  625 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (254)
T 2bz6_H          138 --------------------------------------------------------------------------------  137 (254)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        626 RESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       626 ~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                 .+..+..||++.++++++++|+..+........+.+.||||+...++.++|+|||||++
T Consensus       138 -----------~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl  196 (254)
T 2bz6_H          138 -----------RGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPH  196 (254)
T ss_dssp             -----------TSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEE
T ss_pred             -----------CCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCCCCCCccccccCCCce
Confidence                       23346789999999999999998875322223578999999976777899999999986

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=100.00  E-value=2.2e-38  Score=314.84  Aligned_cols=189  Identities=33%  Similarity=0.636  Sum_probs=162.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC--CCCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV--PPSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~--~~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      |+||.++..++|||+|+|++    ...++|||+||+++||||||||+.+.  ....+.|++|.++....... ..+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~-~~~~~~v   75 (235)
T 4dgj_A            1 IVGGSDAKEGAWPWVVGLYY----DDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSP-QTVPRLI   75 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEECSSSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCT-TCEEEEE
T ss_pred             CCCCccCCCCCCCcEEEEee----CCCeEEEEEEeeCCEEEECHHhcCCCCCCCccEEEEEeeecccccCCC-ceeEEeE
Confidence            78999999999999999986    34789999999999999999999653  35678999998876543332 4577889


Q ss_pred             EEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        469 QIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       469 ~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      .++++||+|+.....||||||||++++.|+++|+|||||.....+ .+..|+++|||.+..                   
T Consensus        76 ~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~-------------------  136 (235)
T 4dgj_A           76 DEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVY-------------------  136 (235)
T ss_dssp             EEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSST-------------------
T ss_pred             EEEEECCCCCCCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCC-------------------
Confidence            999999999999999999999999999999999999999876544 689999999998765                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       137 --------------------------------------------------------------------------------  136 (235)
T 4dgj_A          137 --------------------------------------------------------------------------------  136 (235)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                               .+..+..||++.++++++++|+..+..    ..+.++||||+...++.++|+||||||+.
T Consensus       137 ---------~~~~~~~L~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~  192 (235)
T 4dgj_A          137 ---------QGTTADILQEADVPLLSNERCQQQMPE----YNITENMICAGYEEGGIDSCQGDSGGPLM  192 (235)
T ss_dssp             ---------TCCBCSBCEEEEEEEECHHHHHHHCTT----SCCCTTEEEECCTTCCCBCCTTCTTCEEE
T ss_pred             ---------CCccchhheEeEeeecCHHHhhhhccC----ccCCCCeEeecCCCCCCccCCCCCCCeEE
Confidence                     234467899999999999999998742    24789999999878889999999999873

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=100.00  E-value=2.4e-38  Score=315.98  Aligned_cols=188  Identities=33%  Similarity=0.654  Sum_probs=162.9

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccC--------------CCCCceEEEEccccCCC
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--------------VPPSDLLLRLGEHDLST  456 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~--------------~~~~~l~V~LG~~dl~~  456 (697)
                      |+||.++..++|||+|+|.+.   .+.++|||+||+++||||||||+..              .....+.|++|.+++..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~---~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~   77 (251)
T 3gov_B            1 IFNGRPAQKGTTPWIAMLSHL---NGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLR   77 (251)
T ss_dssp             CBTCEECCTTSCTTEEEEEET---TCCEEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSS
T ss_pred             CCCCEECCCCCcCeEEEEecc---CCCeeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccC
Confidence            789999999999999999752   3468899999999999999999965              34567899999988754


Q ss_pred             CCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCC
Q psy12777        457 EEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYG  536 (697)
Q Consensus       457 ~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~  536 (697)
                      ...  ..+.+.|.++++||+|+...+.||||||||++++.|+++++|||||.... ..+..|+++|||.+..+       
T Consensus        78 ~~~--~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~~~-~~~~~~~v~GwG~~~~~-------  147 (251)
T 3gov_B           78 SDE--NEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQ-QEGAMVIVSGWGKQFLQ-------  147 (251)
T ss_dssp             CCS--SCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSSCC-CTTCEEEEEECSCCTTS-------
T ss_pred             CCC--cceEeeeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCCCC-CCCCEEEEEcCCCCCCC-------
Confidence            433  46889999999999999999999999999999999999999999998765 36999999999987652       


Q ss_pred             CCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccce
Q psy12777        537 HPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQI  616 (697)
Q Consensus       537 ~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~  616 (697)
                                                                                                      
T Consensus       148 --------------------------------------------------------------------------------  147 (251)
T 3gov_B          148 --------------------------------------------------------------------------------  147 (251)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        617 IPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       617 i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                            ..+..||++.+++++.++|+..|...  ...+.++||||+...++.++|+||||||+
T Consensus       148 ----------------------~~~~~L~~~~~~~~~~~~C~~~~~~~--~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl  202 (251)
T 3gov_B          148 ----------------------RFPETLMEIEIPIVDHSTCQKAYAPL--KKKVTRDMICAGEKEGGKDACAGDSGGPM  202 (251)
T ss_dssp             ----------------------CCCSBCEEEEEEEECHHHHHHHTTTT--TCCCCTTEEEESCTTCCCBCCTTCTTCEE
T ss_pred             ----------------------CCCccceEEeeEEECHHHhhhhhhhc--cCCCCCCcEEecCCCCCCccCCCCCCCeE
Confidence                                  24678999999999999999987532  24688999999987788999999999987

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=100.00  E-value=2e-38  Score=316.79  Aligned_cols=188  Identities=29%  Similarity=0.490  Sum_probs=159.0

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|++    ...++|||+||+++||||||||+.+   ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~---~~~~v~~G~~~~~~~~~--~~~~~~v~~   71 (234)
T 1orf_A            1 IIGGNEVTPHSRPYMVLLSL----DRKTICAGALIAKDWVLTAAHCNLN---KRSQVILGAHSITREEP--TKQIMLVKK   71 (234)
T ss_dssp             CBSCEECCTTSSTTEEEEEC----SSSCEEEEEEEETTEEEECTTCCCC---TTCEEEESCSBSSSCCT--TCEEECEEE
T ss_pred             CCCCEECCCCCCCeEEEEcc----CCceEEEEEEeeCCEEEEchhcCCC---CCceEEEeccccCcCCC--ceEEEEEEE
Confidence            78999999999999999976    2368999999999999999999964   46789999988765433  458899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+.....||||||||++++.|+++++|||||.....+ .+..|+++|||.+..                     
T Consensus        72 ~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~---------------------  130 (234)
T 1orf_A           72 EFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHN---------------------  130 (234)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSS---------------------
T ss_pred             EEcCCCCCCCCCCCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCC---------------------
Confidence            9999999998999999999999999999999999999876543 689999999999865                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (234)
T 1orf_A          131 --------------------------------------------------------------------------------  130 (234)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                             .+..+..||++.++++++++|+....+ ++...+.++||||+...++.++|+|||||++.
T Consensus       131 -------~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~  189 (234)
T 1orf_A          131 -------SASWSDTLREVEITIIDRKVCNDRNHY-NFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLL  189 (234)
T ss_dssp             -------SSCCCSBCEEEEEEEECHHHHTSTTTT-TTTTCCCTTEEEEECSSCCCBCCTTCTTCEEE
T ss_pred             -------CCCccccceEeEEEeeCHHHcCCcccc-ccCCccCCCEEEecCCCCCCcCCCCCCCCeEE
Confidence                   234567899999999999999842211 22334556999999766788999999999873

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=100.00  E-value=3.3e-38  Score=311.99  Aligned_cols=188  Identities=26%  Similarity=0.454  Sum_probs=163.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|++....+..++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~--~~~~~~v~~   74 (227)
T 3fzz_A            1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKG----RSMTVTLGAHNIKAKEE--TQQIIPVAK   74 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEECSSSCEEEEEEEEEETTEEEECTTCCC----EEEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEEEeCCCceeEEEEEEEeCCEEEECcccCC----CCcEEEEcccccCCCCC--CceEEEEEE
Confidence            789999999999999999875444457899999999999999999984    46899999998866544  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+.....||||||||++++.|+++++|||||.....+ .+..|+++|||.+..                     
T Consensus        75 ~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~---------------------  133 (227)
T 3fzz_A           75 AIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTP---------------------  133 (227)
T ss_dssp             EEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSST---------------------
T ss_pred             EEECcCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccC---------------------
Confidence            9999999999999999999999999999999999999876543 699999999999866                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (227)
T 3fzz_A          134 --------------------------------------------------------------------------------  133 (227)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                             .+..+..||++.++++++++|+..+..    ....++||||+...++.++|+|||||++.
T Consensus       134 -------~~~~~~~l~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~  189 (227)
T 3fzz_A          134 -------DGEFPKTLHEVKLTVQKDQVCESQFQS----SYNRANEICVGDSKIKGASFEEDSGGPLV  189 (227)
T ss_dssp             -------TSCCCSBCEEEEEEBCCHHHHHHHHTT----TCCTTTEEEECCCSSCBCCTTTTTTCEEE
T ss_pred             -------CCCCCCeeeEEEeeeecHHHhhhhhcc----ccCCCceEEEeCCCCCCcccccCCccceE
Confidence                   234578899999999999999987742    23578999999877888999999999873

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=100.00  E-value=3e-38  Score=327.43  Aligned_cols=195  Identities=30%  Similarity=0.565  Sum_probs=161.0

Q ss_pred             eeCCeeCCCCCcceEEEEEEEec--CCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCCCCC---CCCcE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIR--STYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLSTEEE---PYGYQ  464 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~--~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~~~~---~~~~q  464 (697)
                      |+||.+|..++|||||+|++...  ....|+|||+||+++||||||||+... ....+.|++|.+++.....   ....+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~   80 (290)
T 1fiw_A            1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQ   80 (290)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCE
T ss_pred             CCCCEECCCCCCCcEEEEEEeccCCCccceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCce
Confidence            79999999999999999986432  224689999999999999999999753 2456899999988753221   12458


Q ss_pred             EEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCC--CCCCEEEEEeccccCCCCccccCCCCcccc
Q psy12777        465 ERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN--FVGTSAHVTGWGRLYEGRFRRSYGHPATRQ  542 (697)
Q Consensus       465 ~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~--~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~  542 (697)
                      .+.|.++++||+|+...+.||||||||++++.|+++|+|||||.....  ..+..|+++|||.+..+             
T Consensus        81 ~~~V~~i~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~-------------  147 (290)
T 1fiw_A           81 ERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQEN-------------  147 (290)
T ss_dssp             EEEEEEEEECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTT-------------
T ss_pred             EEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCC-------------
Confidence            899999999999999899999999999999999999999999975432  24899999999998762             


Q ss_pred             cccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeec
Q psy12777        543 EMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN  622 (697)
Q Consensus       543 ~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~  622 (697)
                                                                                                      
T Consensus       148 --------------------------------------------------------------------------------  147 (290)
T 1fiw_A          148 --------------------------------------------------------------------------------  147 (290)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        623 CRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       623 ~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                    ....+..||++.|+++++++|+..+.+   ...+.+.||||+...++.|+|+|||||++
T Consensus       148 --------------~~~~~~~L~~~~v~i~~~~~C~~~~~~---~~~i~~~~iCag~~~~~~~~C~GDSGGPL  203 (290)
T 1fiw_A          148 --------------ARRTSPMLQEARVDLIDLGLCNSTRWY---NGRIRSTNVCAGYPEGKIDTCQGDSGGPL  203 (290)
T ss_dssp             --------------CSSCCSBCEEEEEEEECHHHHTSTTTT---TTCCCTTEEEEECTTCSSBCCTTCTTCEE
T ss_pred             --------------CCCCCceeeEEEEEEecHHHhcccccc---CCcCCCCEEEEecCCCCCeeCCCCCchhe
Confidence                          123467899999999999999875422   23588999999987778899999999987

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=100.00  E-value=9.4e-39  Score=320.00  Aligned_cols=190  Identities=32%  Similarity=0.599  Sum_probs=161.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||.+|..++|||||+|++.. ....++|||+||+++||||||||+.... ...+.|++|.++......  ..+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~-~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~--~~~~~~v~   77 (238)
T 3bg8_A            1 IVGGTASVRGEWPWQVTLHTTS-PTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKE--DTSFFGVQ   77 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEECS-SSCEEEEEEEEEETTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCT--TSCCEEEE
T ss_pred             CCCCeECCCCCcCcEEEEEeec-CCCcEEEEEEEeeCCEEEECHHHCCCCCCCceEEEEEeeccCCcCCC--CceEEeeE
Confidence            7899999999999999998642 2357899999999999999999997642 356899999887754333  35778999


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCC-CCCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN-FVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~-~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                      ++++||+|+.....||||||||++|+.|+++++|||||..... ..+..|+++|||.+..                    
T Consensus        78 ~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~--------------------  137 (238)
T 3bg8_A           78 EIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKL--------------------  137 (238)
T ss_dssp             EEEECTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSS--------------------
T ss_pred             EEEECCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCC--------------------
Confidence            9999999998888999999999999999999999999976532 3588999999999866                    


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (238)
T 3bg8_A          138 --------------------------------------------------------------------------------  137 (238)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              .+..+..||++.++++++++|+..|..    ..+.+.||||+...++.++|+|||||++
T Consensus       138 --------~~~~~~~L~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  192 (238)
T 3bg8_A          138 --------RDKIQNTLQKAKIPLVTNEECQKRYRG----HKITHKMICAGYREGGKDACKGDSGGPL  192 (238)
T ss_dssp             --------SCCCCSBCEEEECCEECHHHHHHHCTT----SCCCTTEEEECCTTCCCBCCTTCTTCEE
T ss_pred             --------CCChhhhhcEeeEEEECHHHhhhhhcC----CCCCCCeEeecCCCCCCCcCCCCCCcce
Confidence                    233567899999999999999988742    2478999999977778899999999987

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=100.00  E-value=2.2e-38  Score=315.82  Aligned_cols=185  Identities=30%  Similarity=0.620  Sum_probs=159.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|+..   ...++|||+||+++||||||||+..  ...+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~---~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~~~--~~~~~~v~~   73 (228)
T 1fxy_A            1 IVGGYNCKDGEVPWQALLINE---ENEGFCGGTILSEFYILTAAHCLYQ--AKRFKVRVGDRNTEQEEG--GEAVHEVEV   73 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEECT---TSCEEEEEEECSSSEEEECGGGTTS--CSSCEEEEECSCTTTCCC--CEEEEEEEE
T ss_pred             CCCCEECCCCCcCcEEEEEcC---CCCeeEEEEEeeCCEEEECHHHCCC--CCcEEEEECccCccccCC--CcEEEEEEE
Confidence            789999999999999999752   2368999999999999999999964  467899999988765433  467899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++|+.|+++|+|||||..... .+..|+++|||.+..+                     
T Consensus        74 i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~v~GwG~~~~~---------------------  131 (228)
T 1fxy_A           74 VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTASS---------------------  131 (228)
T ss_dssp             EEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCCCSS---------------------
T ss_pred             EEECCCCCCCCCcCcEEEEEECCcccCCCceeccCCCCCCCC-CCCEEEEEecCccCCC---------------------
Confidence            999999999899999999999999999999999999976543 6899999999998652                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       132 --------------------------------------------------------------------------------  131 (228)
T 1fxy_A          132 --------------------------------------------------------------------------------  131 (228)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            ....+..||++.++++++++|+..|.     ..+.++||||+...++.|+|+|||||++
T Consensus       132 ------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  185 (228)
T 1fxy_A          132 ------GADYPDELQCLDAPVLSQAKCEASYP-----GKITSNMFCVGFLEGGKDSCQGDSGGPV  185 (228)
T ss_dssp             ------SCCCCSSCEEEEEEBCCHHHHHHHST-----TTCCTTEEEESCTTCSCBCCTTCTTCEE
T ss_pred             ------CCCCCccceEEEEEEeCHHHhHhhcC-----CCCCCCEEEeccCCCCCccccCccccce
Confidence                  12257889999999999999998774     2578999999976778899999999987

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=100.00  E-value=4.6e-38  Score=312.98  Aligned_cols=181  Identities=29%  Similarity=0.536  Sum_probs=158.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|+.    .+.++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~--~~~~~~v~~   70 (223)
T 1lo6_A            1 LVHGGPCDKTSHPYQAALYT----SGHLLCGGVLIHPLWVLTAAHCKK----PNLQVFLGKHNLRQRES--SQEQSSVVR   70 (223)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCC----TTCEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEec----CCCEEEEeEEecCCEEEECccCCC----CCeEEEEcceecCCCCC--CcEEEEEEE
Confidence            78999999999999999975    346899999999999999999985    45889999988765433  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++|+.|+++++|||||.... ..+..|+++|||.+..                      
T Consensus        71 i~~Hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~----------------------  127 (223)
T 1lo6_A           71 AVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCS-ANTTSCHILGWGKTAD----------------------  127 (223)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCCTT-CCCCEEEEEESSCCTT----------------------
T ss_pred             EEECCCCCCCCCcCeEEEEEECCcccCCCceeecccCCCCC-CCCCEEEEEEECCCCC----------------------
Confidence            99999999989999999999999999999999999998765 3689999999998853                      


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       128 --------------------------------------------------------------------------------  127 (223)
T 1lo6_A          128 --------------------------------------------------------------------------------  127 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                             +..+..||++.++++++++|+..|.     ..+.++||||+...++.++|+||||||+.
T Consensus       128 -------~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~  181 (223)
T 1lo6_A          128 -------GDFPDTIQCAYIHLVSREECEHAYP-----GQITQNMLCAGDEKYGKDSCQGDSGGPLV  181 (223)
T ss_dssp             -------SSCCSBCEEEEEEEECHHHHHHHST-----TTCCTTEEEEECTTTCCBCCTTTTTCEEE
T ss_pred             -------CCcCceeeEEEEEEeCHHHhhhhhC-----CCCCCCeEEeecCCCCCeeccccCCCcEE
Confidence                   2346789999999999999998764     25789999999766788999999999873

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=100.00  E-value=2.3e-38  Score=317.56  Aligned_cols=189  Identities=30%  Similarity=0.568  Sum_probs=159.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|++.......++|||+||+++||||||||+..  ...+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~~~v~~G~~~~~~~~~--~~~~~~v~~   76 (240)
T 1gvk_B            1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR--ELTFRVVVGEHNLNQNNG--TEQYVGVQK   76 (240)
T ss_dssp             CBTCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCS--CCCEEEEESCSBTTSCCS--CCEEEEEEE
T ss_pred             CCCCeECCCCCcCEEEEEEecCCCccCceEEEEEeeCCEEEECHHHCCC--CcceEEEECCeecccCCC--cceEEEEEE
Confidence            7899999999999999998533221268999999999999999999975  357899999998865443  358899999


Q ss_pred             EEECCCCCCCCC--CCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQFDPRTF--EYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Yn~~t~--~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +++||+|+....  .||||||||++|+.|+++++|||||.....+ .+..|+++|||.+..                   
T Consensus        77 i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~-------------------  137 (240)
T 1gvk_B           77 IVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRT-------------------  137 (240)
T ss_dssp             EEECTTCCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSST-------------------
T ss_pred             EEECCCCCCCCCCCCCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCC-------------------
Confidence            999999998777  8999999999999999999999999876433 589999999999865                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (240)
T 1gvk_B          138 --------------------------------------------------------------------------------  137 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               ++..+..||++.+++++.++|+..+.+   ...+.+.||||+ ..++.++|+||||||+
T Consensus       138 ---------~~~~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~-~~~~~~~C~GDSGgPL  192 (240)
T 1gvk_B          138 ---------NGQLAQTLQQAYLPTVDYAICSSSSYW---GSTVKNSMVCAG-GDGVRSGCQGDSGGPL  192 (240)
T ss_dssp             ---------TCCBCSBCEEEECCEECHHHHTSTTTT---GGGCCTTEEEEC-CSSSCBCCTTCTTCEE
T ss_pred             ---------CCCcchhccEEEEEEEcHHHhcccccc---CccCCcceEeec-CCCCCcccCCCCcCce
Confidence                     234467899999999999999976422   135789999999 4667899999999987

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=100.00  E-value=2.4e-38  Score=325.62  Aligned_cols=202  Identities=26%  Similarity=0.500  Sum_probs=165.8

Q ss_pred             cccCCCcCCC----CCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccc
Q psy12777        378 KEVCGRRLFP----SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEH  452 (697)
Q Consensus       378 ~~~CG~~~~~----~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~  452 (697)
                      ...||++...    ..||+||.++..++|||||+|++.     .++|||+||+++||||||||+.+.. ...+.|++|.+
T Consensus        19 ~~~CG~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~-----~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~   93 (283)
T 1yc0_A           19 RQACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYIG-----DSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQH   93 (283)
T ss_dssp             --CCSCCSCC-------CBSCEECCTTSSTTEEEEEET-----TEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCC
T ss_pred             CCCcCCcccccccCcCceECCeECCCCCCCeEEEEEcC-----CcEEEEEEeeCCEEEECHHHcCCCCCCceEEEEEeee
Confidence            4569987532    359999999999999999999752     5889999999999999999997643 46789999999


Q ss_pred             cCCCCCCCCCcEEEEEEEEEECCCCCC-CCCCCceEEEecCcc----cccCCCeeeeecCCCCCCC-CCCEEEEEecccc
Q psy12777        453 DLSTEEEPYGYQERRVQIVASHPQFDP-RTFEYDLALLRFYEP----VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRL  526 (697)
Q Consensus       453 dl~~~~~~~~~q~~~V~~IiiHP~Yn~-~t~~nDIALLrL~~P----V~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t  526 (697)
                      ++.....  ..+.+.|.++++||+|+. ....||||||||+++    +.|+++|+|||||.....+ .+..|+++|||.+
T Consensus        94 ~~~~~~~--~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~  171 (283)
T 1yc0_A           94 FFNRTTD--VTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHL  171 (283)
T ss_dssp             BTTCCCS--SCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCS
T ss_pred             ecccCCC--ceEEEeeEEEEecCccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCcc
Confidence            8865443  468899999999999997 778999999999999    8999999999999865443 6899999999998


Q ss_pred             CCCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeec
Q psy12777        527 YEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAA  606 (697)
Q Consensus       527 ~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAA  606 (697)
                      ..+                                                                             
T Consensus       172 ~~~-----------------------------------------------------------------------------  174 (283)
T 1yc0_A          172 DEN-----------------------------------------------------------------------------  174 (283)
T ss_dssp             BTT-----------------------------------------------------------------------------
T ss_pred             CCC-----------------------------------------------------------------------------
Confidence            762                                                                             


Q ss_pred             ccccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCC
Q psy12777        607 HCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDS  686 (697)
Q Consensus       607 HC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dt  686 (697)
                                                    ....+..||++.|+++++++|+..+.+   ...+.+.||||+...++.++
T Consensus       175 ------------------------------~~~~~~~L~~~~v~i~~~~~C~~~~~~---~~~~~~~~iCa~~~~~~~~~  221 (283)
T 1yc0_A          175 ------------------------------VSGYSSSLREALVPLVADHKCSSPEVY---GADISPNMLCAGYFDCKSDA  221 (283)
T ss_dssp             ------------------------------BCSCCSBCEEEEEEBCCHHHHTSTTTT---GGGCCTTEEEESCSSSCCBC
T ss_pred             ------------------------------CCccCchheEeEEEEECHHHhcCcccc---CCcCCCCEEeeCCCCCCCcc
Confidence                                          123467899999999999999875321   23578999999977777899


Q ss_pred             CcccCCCCCC
Q psy12777        687 CEEHARDGTD  696 (697)
Q Consensus       687 CqGDSGgg~~  696 (697)
                      |+|||||++.
T Consensus       222 C~GDSGgPL~  231 (283)
T 1yc0_A          222 CQGDSGGPLA  231 (283)
T ss_dssp             CTTCTTCEEE
T ss_pred             CCCCCCCceE
Confidence            9999999873

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=100.00  E-value=2e-38  Score=340.32  Aligned_cols=198  Identities=33%  Similarity=0.637  Sum_probs=165.1

Q ss_pred             ccCCCcCCCCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccC--CCCCceEEEEccccCCC
Q psy12777        379 EVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLRLGEHDLST  456 (697)
Q Consensus       379 ~~CG~~~~~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~--~~~~~l~V~LG~~dl~~  456 (697)
                      ..||.+.....||+||.++..++|||||+|++    ...++|||+||+++||||||||+..  .....+.|++|.+++..
T Consensus       106 ~~Cg~~~~~~~rIvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~  181 (372)
T 1z8g_A          106 QDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQAS  181 (372)
T ss_dssp             CCCSCCCCC---CBSCEECCTTSSTTEEEEEE----TTEEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTC
T ss_pred             cccCCcCCCCCceECCEECCCCCCCcEEEEEe----CCceEEEEEEecCCEEEEChhhcCCCCCccceEEEEEeeEeccC
Confidence            46898755568999999999999999999986    3578999999999999999999943  23467899999987654


Q ss_pred             CCCCCCcEEEEEEEEEECCCC------CCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCC
Q psy12777        457 EEEPYGYQERRVQIVASHPQF------DPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG  529 (697)
Q Consensus       457 ~~~~~~~q~~~V~~IiiHP~Y------n~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g  529 (697)
                      .    ..+.+.|+++++||+|      +...+.||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+.. 
T Consensus       182 ~----~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~-  256 (372)
T 1z8g_A          182 P----HGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQY-  256 (372)
T ss_dssp             T----TSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSST-
T ss_pred             C----CCcEEEEEEEEECCCccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCC-
Confidence            2    2467899999999999      677889999999999999999999999999865443 589999999999876 


Q ss_pred             CccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccc
Q psy12777        530 RFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV  609 (697)
Q Consensus       530 ~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~  609 (697)
                                                                                                      
T Consensus       257 --------------------------------------------------------------------------------  256 (372)
T 1z8g_A          257 --------------------------------------------------------------------------------  256 (372)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcc
Q psy12777        610 EDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEE  689 (697)
Q Consensus       610 ~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqG  689 (697)
                                                 .+..+..||++.|+++++++|+....+   ...+.++||||+...++.|+|+|
T Consensus       257 ---------------------------~~~~~~~L~~~~v~ii~~~~C~~~~~~---~~~i~~~~iCag~~~~~~d~C~G  306 (372)
T 1z8g_A          257 ---------------------------YGQQAGVLQEARVPIISNDVCNGADFY---GNQIKPKMFCAGYPEGGIDACQG  306 (372)
T ss_dssp             ---------------------------TSCBCSBCEEEEEEEECHHHHTSTTTT---TTCCCTTEEEESCTTCSCBCCTT
T ss_pred             ---------------------------CCCCCceeeEEEEEecChHHhCcchhc---CCcCCCCeEeeecCCCCCcCCCC
Confidence                                       234467899999999999999875321   23588999999987788999999


Q ss_pred             cCCCCC
Q psy12777        690 HARDGT  695 (697)
Q Consensus       690 DSGgg~  695 (697)
                      |||||+
T Consensus       307 DSGGPL  312 (372)
T 1z8g_A          307 DSGGPF  312 (372)
T ss_dssp             CTTCEE
T ss_pred             CCccce
Confidence            999997

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=100.00  E-value=2.6e-38  Score=313.98  Aligned_cols=186  Identities=32%  Similarity=0.545  Sum_probs=158.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|++    .+.++|||+||+++||||||||+.+.....+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~--~~~~~~v~~   74 (228)
T 2xw9_A            1 ILGGREAEAHARPYMASVQL----NGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEP--SKRLYDVLR   74 (228)
T ss_dssp             CBCC-CCCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGGSSCTTCCEEEEESCSBSSSCCT--TCEEEEEEE
T ss_pred             CCCCeECCCCCCCcEEEEEE----CCCeEEEEEEEeCCEEEEcHHhCCCCCCCceEEEEcccccCCCCC--cceEEEEEE
Confidence            78999999999999999986    247899999999999999999998655668999999998765443  357899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+...+.||||||||++++.|+++++|||||.....+ .+..|+++|||.+..                     
T Consensus        75 i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~---------------------  133 (228)
T 2xw9_A           75 AVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNH---------------------  133 (228)
T ss_dssp             EEECTTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCST---------------------
T ss_pred             EEeCCCCCCCCCCCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCC---------------------
Confidence            9999999998999999999999999999999999999864433 689999999999875                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (228)
T 2xw9_A          134 --------------------------------------------------------------------------------  133 (228)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..||++.++++++++|++.+...   ..+.+.||||+.  ++.++|+|||||++
T Consensus       134 -------~~~~~~~l~~~~~~~~~~~~C~~~~~~~---~~~~~~~~Ca~~--~~~~~C~GDsGgPL  187 (228)
T 2xw9_A          134 -------AGRRPDSLQHVLLPVLDRATCNRRTHHD---GAITERLMCAES--NRRDSCKGDAGGPL  187 (228)
T ss_dssp             -------TCCCCSBCEEEECCEECHHHHTSTTTTT---TCCCTTEEEECC--SSCBCCTTCTTCEE
T ss_pred             -------CCCCCchheEEEEEEcChhHhcCccccC---CcccCCEEecCC--CCCccCCCCCcccE
Confidence                   2344688999999999999999876421   357899999984  56899999999987

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=100.00  E-value=3.5e-38  Score=313.56  Aligned_cols=184  Identities=26%  Similarity=0.469  Sum_probs=157.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|++... +..++|||+||+++||||||||+.+    .+.|++|.+++...+.  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~-~~~~~CgGsLI~~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~--~~~~~~v~~   73 (224)
T 1cgh_A            1 IIGGRESRPHSRPYMAYLQIQSP-AGQSRCGGFLVREDFVLTAAHCWGS----NINVTLGAHNIQRREN--TQQHITARR   73 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEESTT-TTSCEEEEEEEETTEEEECGGGCCS----SEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEECC-CCCeEEEEEEeeCCEEEEhHHhCCC----CCEEEEeecccCCCCC--ccEEEEEEE
Confidence            78999999999999999986322 2358999999999999999999964    5899999998765433  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+...+.||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..                     
T Consensus        74 i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~---------------------  132 (224)
T 1cgh_A           74 AIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSM---------------------  132 (224)
T ss_dssp             EEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSS---------------------
T ss_pred             EEcCCCCCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCC---------------------
Confidence            9999999998899999999999999999999999999876533 689999999999864                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       133 --------------------------------------------------------------------------------  132 (224)
T 1cgh_A          133 --------------------------------------------------------------------------------  132 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              +..+..||++.++++++++|+..|.     ....+.||||+...++.++|+||||||+
T Consensus       133 --------~~~~~~l~~~~~~i~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  185 (224)
T 1cgh_A          133 --------RRGTDTLREVQLRVQRDRQCLRIFG-----SYDPRRQICVGDRRERKAAFKGDSGGPL  185 (224)
T ss_dssp             --------SCCCSBCEEEEEEBCCHHHHHHHCT-----TCCTTTEEEECCTTSCCBCCTTCTTCEE
T ss_pred             --------CCCCCcceEEEEEeeCHHHHHHHhC-----cCCCcceEeeccCCCCCeEeeCCCccce
Confidence                    2235789999999999999998773     2345669999976677899999999987

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=100.00  E-value=4.5e-38  Score=313.04  Aligned_cols=182  Identities=29%  Similarity=0.593  Sum_probs=157.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|+     .+.++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~-----~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~--~~~~~~v~~   69 (223)
T 3mfj_A            1 IVGGYTCGANTVPYQVSLN-----SGYHFCGGSLINSQWVVSAAHCYK----SGIQVRLGEDNINVVEG--NEQFISASK   69 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-----SSSEEEEEEEEETTEEEECGGGCC----SSCEEEESCSSTTSCCS--CCEEEEEEE
T ss_pred             CCCCEECCCCcCCEEEEEE-----cCCeEEEEEEecCCEEEEhHHhcC----CCcEEEECCceecccCC--CcEEEEeeE
Confidence            7899999999999999993     235899999999999999999994    46889999988765333  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++++.|+++++|||||.... ..+..|+++|||.+...                     
T Consensus        70 i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~---------------------  127 (223)
T 3mfj_A           70 SIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCA-SAGTQCLISGWGNTKSS---------------------  127 (223)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCC-CTTCEEEEEESSCCCSS---------------------
T ss_pred             EEECCCCCCCCCCCCEEEEEeCCCcccCCcEeeeECCCCCC-CCCCEEEEEeeeccCCC---------------------
Confidence            99999999988999999999999999999999999998754 36899999999998641                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       128 --------------------------------------------------------------------------------  127 (223)
T 3mfj_A          128 --------------------------------------------------------------------------------  127 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                            ....+..||++.++++++++|+..|.     ..+.++||||+...++.++|+|||||++.
T Consensus       128 ------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~  182 (223)
T 3mfj_A          128 ------GTSYPDVLKCLKAPILSDSSCKSAYP-----GQITSNMFCAGYLEGGKDSCQGDSGGPVV  182 (223)
T ss_dssp             ------SCCCCSSCEEEEEEBCCHHHHHHHST-----TTCCTTEEEESCTTSSCBCCTTCTTCEEE
T ss_pred             ------CCcccchheEEEEEEeCHHHhhhhhc-----CcCCCCEEEccCCCCCCCcCCCCcccceE
Confidence                  23456889999999999999998764     24789999999767788999999999873

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=100.00  E-value=1.5e-38  Score=328.43  Aligned_cols=197  Identities=34%  Similarity=0.627  Sum_probs=156.3

Q ss_pred             CCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccC------CCCCceEEEEccccCCCCCCCC
Q psy12777        388 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED------VPPSDLLLRLGEHDLSTEEEPY  461 (697)
Q Consensus       388 ~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~------~~~~~l~V~LG~~dl~~~~~~~  461 (697)
                      ..||+||.+|..++|||||+|+..  ....++|||+||+++||||||||+..      .....+.|++|.+++...... 
T Consensus        28 ~~rIvgG~~a~~~~~Pw~v~l~~~--~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~-  104 (289)
T 2bdy_A           28 DGRIVEGSDAEIGMSPWQVMLFRK--SPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERN-  104 (289)
T ss_dssp             ---CBSCEECCTTSCTTEEEEEET--TTTEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTT-
T ss_pred             CCeEECCEECCCCCCCCeEEEEEC--CCCCEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCC-
Confidence            469999999999999999999752  23468999999999999999999953      234678999999887543321 


Q ss_pred             CcEEEEEEEEEECCCCCC-CCCCCceEEEecCcccccCCCeeeeecCCCCC----CCCCCEEEEEeccccCCCCccccCC
Q psy12777        462 GYQERRVQIVASHPQFDP-RTFEYDLALLRFYEPVKFQPNIIPICVPEDDT----NFVGTSAHVTGWGRLYEGRFRRSYG  536 (697)
Q Consensus       462 ~~q~~~V~~IiiHP~Yn~-~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~----~~~G~~c~VtGWG~t~~g~~~~s~~  536 (697)
                      ..+.+.|.++++||+|+. ..+.||||||||++|+.|+++|+|||||....    ...+..|+|+|||.+..+.      
T Consensus       105 ~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~------  178 (289)
T 2bdy_A          105 IEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETW------  178 (289)
T ss_dssp             TCEEEEEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------
T ss_pred             cceeeeeEEEEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCcc------
Confidence            346788999999999984 56789999999999999999999999997542    1258999999999987520      


Q ss_pred             CCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccce
Q psy12777        537 HPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQI  616 (697)
Q Consensus       537 ~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~  616 (697)
                                                                                                      
T Consensus       179 --------------------------------------------------------------------------------  178 (289)
T 2bdy_A          179 --------------------------------------------------------------------------------  178 (289)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeecccccccccccccccCCC-CCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCC---CCCCCCcccCC
Q psy12777        617 IPIIQNCRRRESNLWKMALADGP-LPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRK---GSFDSCEEHAR  692 (697)
Q Consensus       617 i~~~~~~~~~~~~~Wg~~~~~~~-~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~---g~~dtCqGDSG  692 (697)
                                     ..  ..+. .+..||++.|+++++++|+..|.     ..+.++||||+...   ++.|+|+||||
T Consensus       179 ---------------~~--~~~~~~~~~L~~~~v~i~~~~~C~~~~~-----~~i~~~~iCag~~~~~~~~~~~C~GDSG  236 (289)
T 2bdy_A          179 ---------------TA--NVGKGQPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACEGDSG  236 (289)
T ss_dssp             -----------------------CCCSBCEEEEEEBCCHHHHHHTCS-----SCCCTTEEEECCCGGGCCCCBCCTTCTT
T ss_pred             ---------------cc--CccccccccceEEEEEEECHHHhhcccc-----CcCCCCEEeccCCCCCCCCCccCCCCCc
Confidence                           00  0011 26789999999999999998763     24789999998643   36799999999


Q ss_pred             CCC
Q psy12777        693 DGT  695 (697)
Q Consensus       693 gg~  695 (697)
                      |++
T Consensus       237 GPL  239 (289)
T 2bdy_A          237 GPF  239 (289)
T ss_dssp             CEE
T ss_pred             cce
Confidence            987

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=100.00  E-value=2.6e-38  Score=344.66  Aligned_cols=199  Identities=32%  Similarity=0.533  Sum_probs=167.6

Q ss_pred             cCCCcCCCCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCC
Q psy12777        380 VCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEE  459 (697)
Q Consensus       380 ~CG~~~~~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~  459 (697)
                      .||..  ...||+||.+|..++|||||+|++...+...++|||+||+++||||||||+.......+.|++|.+++....+
T Consensus       110 ~CG~~--~~~rIvgG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~  187 (408)
T 2xxl_A          110 DCGNF--LSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEED  187 (408)
T ss_dssp             CCSCC--CCCCCCSSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTTTCTTTEEEEEESCSBTTCSCC
T ss_pred             ccCCC--CCCceECCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcCCCCCceEEEEeeeeECCCccc
Confidence            69933  3679999999999999999999875433347899999999999999999998755567899999998865432


Q ss_pred             ----------CCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC----CCCCCEEEEEeccc
Q psy12777        460 ----------PYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT----NFVGTSAHVTGWGR  525 (697)
Q Consensus       460 ----------~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~----~~~G~~c~VtGWG~  525 (697)
                                ....+.+.|+++++||+|+...+.||||||||++++.|+++|+|||||....    ...+..|+++|||.
T Consensus       188 ~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~  267 (408)
T 2xxl_A          188 CRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGT  267 (408)
T ss_dssp             EEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCC
T ss_pred             hhhcccccccCCceEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCc
Confidence                      1235789999999999999889999999999999999999999999997643    23689999999999


Q ss_pred             cCCCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEee
Q psy12777        526 LYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTA  605 (697)
Q Consensus       526 t~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSA  605 (697)
                      +..+                                                                            
T Consensus       268 t~~~----------------------------------------------------------------------------  271 (408)
T 2xxl_A          268 TENG----------------------------------------------------------------------------  271 (408)
T ss_dssp             BTTB----------------------------------------------------------------------------
T ss_pred             CCCC----------------------------------------------------------------------------
Confidence            8762                                                                            


Q ss_pred             cccccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCC
Q psy12777        606 AHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFD  685 (697)
Q Consensus       606 AHC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~d  685 (697)
                                                       ..+.+||++.|+++++++|+..|..     .+..+|||||... +.|
T Consensus       272 ---------------------------------~~s~~L~~~~v~iv~~~~C~~~~~~-----~~~~~~iCAg~~~-g~d  312 (408)
T 2xxl_A          272 ---------------------------------SSSDVLLQANVPLQPRSACSQAYRR-----AVPLSQLCVGGGD-LQD  312 (408)
T ss_dssp             ---------------------------------CSCSBCEEEEEEEECHHHHHHHHTS-----CCCTTEEEECCSC-SSS
T ss_pred             ---------------------------------CCCchheEeeeeecCHHHHHHHhcc-----cCCCceEeecCCC-CCc
Confidence                                             1468899999999999999998752     2456999999644 689


Q ss_pred             CCcccCCCCC
Q psy12777        686 SCEEHARDGT  695 (697)
Q Consensus       686 tCqGDSGgg~  695 (697)
                      +|+|||||++
T Consensus       313 ~C~GDSGGPL  322 (408)
T 2xxl_A          313 SCKGDSGGPL  322 (408)
T ss_dssp             GGGSCTTCEE
T ss_pred             cCCCcccChh
Confidence            9999999997

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=100.00  E-value=2.5e-38  Score=317.09  Aligned_cols=191  Identities=29%  Similarity=0.633  Sum_probs=161.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||.++..++|||+|+|++.. ....++|||+||+++||||||||+.+.. ...+.|++|.+++.....  ..+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~-~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~--~~~~~~v~   77 (241)
T 2any_A            1 IVGGTESSWGEWPWQVSLQVKL-TAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITK--DTPFSQIK   77 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEES-SSEEEEEEEEEEETTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCT--TSCCBCEE
T ss_pred             CCCCEECCCCCCCcEEEEEEEc-CCCceEEEEEEecCCEEEECHHHcCCCCCCccEEEEeeeeecccccc--CceEEeeE
Confidence            7899999999999999998643 2457899999999999999999997643 356889999887754332  34667899


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCC-CCCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN-FVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~-~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                      ++++||+|+.....||||||||++|+.|+++++|||||..... ..+..|+++|||.+..                    
T Consensus        78 ~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~--------------------  137 (241)
T 2any_A           78 EIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKE--------------------  137 (241)
T ss_dssp             EEEECTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSST--------------------
T ss_pred             EEEECCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCC--------------------
Confidence            9999999998889999999999999999999999999986543 3589999999999866                    


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (241)
T 2any_A          138 --------------------------------------------------------------------------------  137 (241)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                              .+..+..||++.++++++++|+..|..    ..+.+.||||+...++.++|+||||||+.
T Consensus       138 --------~~~~~~~L~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~  193 (241)
T 2any_A          138 --------KGEIQNILQKVNIPLVTNEECQKRYQD----YKITQRMVCAGYKEGGKDACKGDSGGPLV  193 (241)
T ss_dssp             --------TCCCCSBCEEEEEEEECHHHHHTTSCT----TCSCTTEEEECCTTCCCBCCTTCTTCEEE
T ss_pred             --------CCCcCchhheeEeEEeCHHHhhhHhcc----CCCCcCcEeecCCCCCCccCCCCCCCcEE
Confidence                    233567899999999999999987642    13789999999777788999999999873

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=100.00  E-value=5.7e-38  Score=312.74  Aligned_cols=184  Identities=29%  Similarity=0.598  Sum_probs=157.9

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||.++..++|||+|+|++    ...++|||+||+++||||||||+... ....+.|++|.....      ..+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~~v~~G~~~~~------~~~~~~v~   70 (232)
T 2oq5_A            1 IVGGTEVEEGEWPWQASLQW----DGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIKP------SKMKRGLR   70 (232)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGGSSCCCGGGEEEEESSBSTT------CSEEEEEE
T ss_pred             CCCCEECCCCCCCeeEEEEe----CCCeeEEEEEEcCCEEEECHHHcCCCCCCceEEEEEeeEECC------CceEEeEE
Confidence            78999999999999999986    34689999999999999999999763 345689999976431      34778999


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                      ++++||+|+...+.||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..                    
T Consensus        71 ~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~--------------------  130 (232)
T 2oq5_A           71 RIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKN--------------------  130 (232)
T ss_dssp             EEEECTTCCTTCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSST--------------------
T ss_pred             EEEeCCCCCCCCCCCCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCC--------------------
Confidence            99999999998899999999999999999999999999865443 589999999999875                    


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (232)
T 2oq5_A          131 --------------------------------------------------------------------------------  130 (232)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              .+..+..||++.|+++++++|+..+.+   ...+.++||||+...++.++|+|||||++
T Consensus       131 --------~~~~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL  186 (232)
T 2oq5_A          131 --------DGYSQNHLRQAQVTLIDATTCNEPQAY---NDAITPRMLCAGSLEGKTDACQGDSGGPL  186 (232)
T ss_dssp             --------TCCCCSBCEEEEEEEECHHHHTSTTTT---TTCCCTTEEEEECTTCSSBCCTTCTTCEE
T ss_pred             --------CCCCCceeeEeEEEEeCHHHcCCcccc---CCccCCCEEeecCCCCCCccCCCCCCCcE
Confidence                    234467899999999999999976532   23578999999977777899999999987

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=100.00  E-value=2.9e-38  Score=313.79  Aligned_cols=181  Identities=30%  Similarity=0.537  Sum_probs=156.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||.+|..++|||||+|++    .+.++|||+||+++||||||||+.+.. ...+.|++|.+++..     ..+.+.|+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~-----~~~~~~v~   71 (222)
T 1eq9_A            1 IVGGKDAPVGKYPYQVSLRL----SGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSE-----SGDVYDVE   71 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTS-----CCEEEEEE
T ss_pred             CCCCEECCCCCcceEEEEEe----CCCeEEEEEEeeCCEEEEhhhcCCCCCCCceEEEEECceecCC-----CCeEEEEE
Confidence            78999999999999999975    346899999999999999999997643 567899999987743     35789999


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++++||+|+...+.||||||||++|+.|+++|+|||||.......+..|+++|||.+..                     
T Consensus        72 ~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~---------------------  130 (222)
T 1eq9_A           72 DAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRL---------------------  130 (222)
T ss_dssp             EEEECTTCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSST---------------------
T ss_pred             EEEECCCCCCCCCCCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCC---------------------
Confidence            99999999988899999999999999999999999999876645689999999999865                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (222)
T 1eq9_A          131 --------------------------------------------------------------------------------  130 (222)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..||++.++++++++|++..    +  .+.+.||||+. .++.++|+||||||+
T Consensus       131 -------~~~~~~~L~~~~~~~~~~~~C~~~~----~--~~~~~~~Ca~~-~~~~~~C~GDSGgPL  182 (222)
T 1eq9_A          131 -------GGNTPNALQEIELIVHPQKQCERDQ----W--RVIDSHICTLT-KRGEGACHGDSGGPL  182 (222)
T ss_dssp             -------TCCCCSBCEEEEEEEECHHHHHHHS----S--SCCTTEEEECC-CTTCBCCTTCTTCEE
T ss_pred             -------CCcccchheEeEEEEeCHHHhCccc----C--CCCccEEeecC-CCCCeeeeCCccceE
Confidence                   2345678999999999999999432    1  26789999986 567899999999987

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=100.00  E-value=3.6e-38  Score=313.55  Aligned_cols=181  Identities=31%  Similarity=0.588  Sum_probs=157.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|+.     +.++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-----~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~--~~~~~~v~~   69 (222)
T 1hj8_A            1 IVGGYECKAYSQPHQVSLNS-----GYHFCGGSLVNENWVVSAAHCYK----SRVEVRLGEHNIKVTEG--SEQFISSSR   69 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEES-----SSEEEEEEEEETTEEEECGGGCC----SSCEEEESCSBTTSCCS--CCEEEEEEE
T ss_pred             CCCCEECCCCCCCEEEEEEc-----CCcEEEeEEecCCEEEECHHhcC----CCeEEEEcccccccCCC--CcEEEEEEE
Confidence            78999999999999999952     35899999999999999999996    45789999988765433  458899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++|+.|+++|+|||||.... ..+..|+++|||.+..                      
T Consensus        70 i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~----------------------  126 (222)
T 1hj8_A           70 VIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCA-PAGTMCTVSGWGNTMS----------------------  126 (222)
T ss_dssp             EEECTTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSSCC-CTTCEEEEEESSCCCC----------------------
T ss_pred             EEECCCCCCCCCCCcEEEEEECCcccCCCceeccCCCCCCC-CCCCEEEEEECCCCCC----------------------
Confidence            99999999888999999999999999999999999997653 3689999999999865                      


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       127 --------------------------------------------------------------------------------  126 (222)
T 1hj8_A          127 --------------------------------------------------------------------------------  126 (222)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                            .+..+..||++.++++++++|+..|.     ..+.+.||||+...++.++|+||||||+.
T Consensus       127 ------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~  181 (222)
T 1hj8_A          127 ------STADSNKLQCLNIPILSYSDCNNSYP-----GMITNAMFCAGYLEGGKDSCQGDSGGPVV  181 (222)
T ss_dssp             ------SSCCTTBCEEEEEEBCCHHHHHHHST-----TCCCTTEEEESCTTSSCBCCTTCTTCEEE
T ss_pred             ------CCCCCceeEEEEEEEcCHHHhhhhcc-----CCCCCCeEEeccCCCCCccCCCCcccceE
Confidence                  23346789999999999999998774     24789999999767788999999999873

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=100.00  E-value=3.6e-38  Score=311.71  Aligned_cols=189  Identities=24%  Similarity=0.352  Sum_probs=164.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|++    ...++|||+||+++||||||||+.......+.|++|.+++..     ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~-----~~~~~~v~~   71 (235)
T 3h7t_A            1 IIGGKKSDITKEPWAVGVLV----DEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYRTT-----KGTSVMAKK   71 (235)
T ss_dssp             CBTCEECCTTTSTTEEEEEE----TTSCCEEEEESSSSEEEECHHHHTTCCGGGEEEEESCSBSSS-----SSEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEec----CCCceEeEEEeeCCEEEECHHHCCCCCCCeeEEEcCcccccc-----CCceeeeee
Confidence            78999999999999999986    246889999999999999999998766788999999987753     347899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCC-CeeeeecCCCCCC-CCCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQP-NIIPICVPEDDTN-FVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~-~V~PICLP~~~~~-~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                      +++| +|+.....||||||+|++|+.|++ +++|||||..... ..+..|+++|||.+..+                   
T Consensus        72 i~~h-~y~~~~~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~-------------------  131 (235)
T 3h7t_A           72 IYIV-RYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFK-------------------  131 (235)
T ss_dssp             EEEC-SCBTTTTBTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTT-------------------
T ss_pred             EEee-ecCCCCCCCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCC-------------------
Confidence            9999 999999999999999999999999 9999999987643 36999999999998762                   


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       132 --------------------------------------------------------------------------------  131 (235)
T 3h7t_A          132 --------------------------------------------------------------------------------  131 (235)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                              ....+..||++.++++++++|+..|........+.++||||+...++.++|+|||||++.
T Consensus       132 --------~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~  191 (235)
T 3h7t_A          132 --------SLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAV  191 (235)
T ss_dssp             --------CCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEE
T ss_pred             --------CCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCccccCCCCCcee
Confidence                    124578899999999999999998864333335889999999877789999999999873

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=100.00  E-value=3.6e-38  Score=315.14  Aligned_cols=182  Identities=30%  Similarity=0.570  Sum_probs=156.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|++    .+.++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~--~~~~~~v~~   70 (237)
T 1ao5_A            1 VVGGFNCEKNSQPWQVAVYY----QKEHICGGVLLDRNWVLTAAHCYV----DQYEVWLGKNKLFQEEP--SAQHRLVSK   70 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECTTCCC----SSCEEEESCCBSSSCCS--SCEECCEEE
T ss_pred             CCCCeECCCCCcCCEEEEee----CCCeEEEEEEeeCCEEEECHHHCC----CCCEEEecccccccCCC--CcEEEEEEE
Confidence            78999999999999999986    346899999999999999999995    46889999988765433  457888999


Q ss_pred             EEECCCCCCCCC-----------CCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCc
Q psy12777        471 VASHPQFDPRTF-----------EYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPA  539 (697)
Q Consensus       471 IiiHP~Yn~~t~-----------~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~  539 (697)
                      +++||+|+....           .||||||||++|+.|+++|+|||||.... ..+..|+++|||.+..+          
T Consensus        71 ~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~----------  139 (237)
T 1ao5_A           71 SFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEP-KPGSKCLASGWGSITPT----------  139 (237)
T ss_dssp             EEECTTSCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCSCC-CTTCEEEEEESCCSSCC----------
T ss_pred             EEcCCCcCcccccccccccccCCCCCEEEEEeCCccccCCceeCCCcCCCCC-CCCCEEEEEECCccCCC----------
Confidence            999999986554           89999999999999999999999998754 36899999999998762          


Q ss_pred             ccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeee
Q psy12777        540 TRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI  619 (697)
Q Consensus       540 ~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~  619 (697)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (237)
T 1ao5_A          140 --------------------------------------------------------------------------------  139 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        620 IQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       620 ~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                       ....+..||++.|+++++++|++.|.     ..+.+.||||+...++.++|+||||||+
T Consensus       140 -----------------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  193 (237)
T 1ao5_A          140 -----------------RWQKPDDLQCVFITLLPNENCAKVYL-----QKVTDVMLCAGEMGGGKDTCRDDSGGPL  193 (237)
T ss_dssp             ------------------CCCCSBCEEEEEEEECHHHHHHHCS-----SCCCTTEEEEECTTCSCBCCTTCTTCEE
T ss_pred             -----------------CCCCCCcccEEEEEecChhHhhhhhc-----ccCCCCEEEEccCCCCCCCCCCCCcceE
Confidence                             13456889999999999999998763     2578999999954667899999999987

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=100.00  E-value=5e-38  Score=312.72  Aligned_cols=182  Identities=30%  Similarity=0.562  Sum_probs=157.0

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|++    ...++|||+||+++||||||||+.+    .+.|++|.+++....+. ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~g~~~~~~~~~~-~~~~~~v~~   71 (223)
T 2bdg_A            1 IINGEDCSPHSQPWQAALVM----ENELFCSGVLVHPQWVLSAAHCFQN----SYTIGLGLHSLEADQEP-GSQMVEASL   71 (223)
T ss_dssp             CBTCEECCTTSSTTEEEEEC----SSCEEEEEEEEETTEEEECGGGCCS----SEEEEESCSBSCGGGCT-TCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEee----CCCEEEEEEEecCCEEEEhHHhCCC----CeEEEEeeeecCCCCCC-CcEEEEEEE
Confidence            78999999999999999976    2468999999999999999999953    57899998877543221 457889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++|+.|+++|+|||||.... ..+..|+++|||.+..                      
T Consensus        72 ~~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~----------------------  128 (223)
T 2bdg_A           72 SVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIASQCP-TAGNSCLVSGWGLLAN----------------------  128 (223)
T ss_dssp             EEECTTTTSSTTCSCCEEEEESSCCCCCSSCCCCCBCSSCC-CTTCEEEEEESCCCTT----------------------
T ss_pred             EEeCCCCCCCCCcCcEEEEEECCcccCCCceecccCCCCCC-CCCCEEEEEeCcccCC----------------------
Confidence            99999999988999999999999999999999999997654 3689999999999865                      


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       129 --------------------------------------------------------------------------------  128 (223)
T 2bdg_A          129 --------------------------------------------------------------------------------  128 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                             +..+..||++.++++++++|++.|.     ..+.+.||||+...++.++|+||||||+.
T Consensus       129 -------~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~  182 (223)
T 2bdg_A          129 -------GRMPTVLQCVNVSVVSEEVCSKLYD-----PLYHPSMFCAGGGQDQKDSCNGDSGGPLI  182 (223)
T ss_dssp             -------SCCCSBCEEEEEEBCCHHHHHHHST-----TTCCTTEEEECCSTTCCBCCTTCTTCEEE
T ss_pred             -------CCCCCcceEEEEEEeCHHHhhhhhC-----CCCCCCeEeccCCCCCCCcCCCCCCchhe
Confidence                   1346789999999999999998774     24789999999766778999999999873

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=100.00  E-value=8.8e-38  Score=312.06  Aligned_cols=182  Identities=29%  Similarity=0.581  Sum_probs=157.1

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|+.    ...++|||+||+++||||||||+.+    .+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~--~~~~~~v~~   70 (238)
T 1spj_A            1 IVGGWECEQHSQPWQAALYH----FSTFQCGGILVHRQWVLTAAHCISD----NYQLWLGRHNLFDDEN--TAQFVHVSE   70 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCS----SEEEEESCSBTTSCCT--TCEEECEEE
T ss_pred             CCCCEECCCCCCCcEEEEEe----CCCeeEEEEEecCCEEEEcHHhCCC----CceEEEEeccccCCCC--CceEEEEEE
Confidence            78999999999999999976    2468999999999999999999963    5889999988765443  468889999


Q ss_pred             EEECCCCC-----------CCCCCCceEEEecCcccc-cCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCC
Q psy12777        471 VASHPQFD-----------PRTFEYDLALLRFYEPVK-FQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHP  538 (697)
Q Consensus       471 IiiHP~Yn-----------~~t~~nDIALLrL~~PV~-fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p  538 (697)
                      +++||+|+           ...+.||||||||++|+. |+++++|||||..... .+..|+++|||.+..+         
T Consensus        71 ~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~~~~~-~~~~~~v~GwG~~~~~---------  140 (238)
T 1spj_A           71 SFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPE-VGSTCLASGWGSIEPE---------  140 (238)
T ss_dssp             EEECTTSCGGGGCC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCSSCCC-TTCEEEEEESSCSSSS---------
T ss_pred             EEcCCCccccccccccccccccCCCCeEEEEECccccccCCceeeccCCCCCCC-CCCEEEEEecCCCCCC---------
Confidence            99999998           456789999999999998 9999999999976543 6899999999998762         


Q ss_pred             cccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceee
Q psy12777        539 ATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIP  618 (697)
Q Consensus       539 ~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~  618 (697)
                                                                                                      
T Consensus       141 --------------------------------------------------------------------------------  140 (238)
T 1spj_A          141 --------------------------------------------------------------------------------  140 (238)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        619 IIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       619 ~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                        ....+..||++.|+++++++|+..+.     ..+.+.||||+...++.++|+||||||+
T Consensus       141 ------------------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  194 (238)
T 1spj_A          141 ------------------NFSFPDDLQCVDLKILPNDECKKAHV-----QKVTDFMLCVGHLEGGKDTCVGDSGGPL  194 (238)
T ss_dssp             ------------------SCCCCSBCEEEEEEEECHHHHHHHCS-----SCCCTTEEEEECTTCSSBCCTTCTTCEE
T ss_pred             ------------------CCCCcCcccEEEEeecCHHHhhhhcc-----CCCCCCeEEeeCCCCCCCCCCCCCCCcE
Confidence                              22456889999999999999998763     2478999999976778899999999987

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=100.00  E-value=4.7e-38  Score=316.60  Aligned_cols=184  Identities=27%  Similarity=0.503  Sum_probs=157.1

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|+.    ++.++|||+||+++||||||||+.+.. ..+.|++|.+++..     ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~~-~~~~v~~G~~~~~~-----~~~~~~v~~   70 (240)
T 2zgc_A            1 IIGGREVIPHSRPYMASLQR----NGSHLCGGVLVHPKWVLTAAHCLAQRM-AQLRLVLGLHTLDS-----PGLTFHIKA   70 (240)
T ss_dssp             CBTCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGGCSCG-GGEEEEESCSBSSS-----CCEEEEEEE
T ss_pred             CCCCEECCCCCcCcEEEEEe----CCCeEEEEEEEcCCEEEEcHHhcCCCC-CCEEEEecccccCC-----CCeEEEEEE
Confidence            78999999999999999976    346899999999999999999997632 37899999987754     237889999


Q ss_pred             EEECCCCCCCC-CCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        471 VASHPQFDPRT-FEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       471 IiiHP~Yn~~t-~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                      +++||+|+... +.||||||||++++.|+++|+|||||.....+ .+..|+++|||.+..                    
T Consensus        71 i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~--------------------  130 (240)
T 2zgc_A           71 AIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQ--------------------  130 (240)
T ss_dssp             EEECTTCBCTTSCBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSST--------------------
T ss_pred             EEECCCCCCCCCCcccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccC--------------------
Confidence            99999999776 89999999999999999999999999876533 689999999999865                    


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (240)
T 2zgc_A          131 --------------------------------------------------------------------------------  130 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              .+..+..||++.|+++++++|+....+   ...+.++||||+...++.++|+|||||++
T Consensus       131 --------~~~~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  186 (240)
T 2zgc_A          131 --------GGRLSRVLRELDLQVLDTRMCNNSRFW---NGSLSPSMVCLAADSKDQAPCKGDSGGPL  186 (240)
T ss_dssp             --------TCCBCSBCEEEEEEECCHHHHTSTTTT---TTCCCTTEEEEECSSTTCBCCTTCTTCEE
T ss_pred             --------CCCcCceeeeeeeeecCHHHhCCcccc---CCCCCCceEeeccCCCCCccCCCCccCee
Confidence                    234568899999999999999873211   13578899999976677899999999987

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=100.00  E-value=7.7e-38  Score=315.06  Aligned_cols=193  Identities=31%  Similarity=0.637  Sum_probs=164.0

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccC-CCCCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED-VPPSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~-~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||.+|..++|||||+|++    ...++|||+||+++||||||||+.+ .....+.|++|.+++.....  ..+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~--~~~~~~v~   74 (261)
T 3gyl_B            1 ITGGSSAVAGQWPWQVSITY----EGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSE--DAKVSTLK   74 (261)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEECSSSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCS--SCEEECEE
T ss_pred             CCCCcCCCCCCCCcEEEEee----CCceEEEEEEEcCCEEEECHHHCCCCCCcccEEEEeCceeccCCCC--CceEEEEE
Confidence            78999999999999999976    3478999999999999999999964 33456899999998866444  46788999


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                      ++++||+|+.....||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..+.                  
T Consensus        75 ~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~------------------  136 (261)
T 3gyl_B           75 DIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSV------------------  136 (261)
T ss_dssp             EEEECTTCCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTB------------------
T ss_pred             EEEECCCcCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCC------------------
Confidence            99999999999999999999999999999999999999876544 58999999999987620                  


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       137 --------------------------------------------------------------------------------  136 (261)
T 3gyl_B          137 --------------------------------------------------------------------------------  136 (261)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCC---cccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAG---FIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~---~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              ....+..||++.+++++++.|+..|....   ....+.++||||+...++.++|+|||||++
T Consensus       137 --------~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl  198 (261)
T 3gyl_B          137 --------SLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPL  198 (261)
T ss_dssp             --------CCCTTCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEE
T ss_pred             --------CccCCccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeCCCCCCCccCCCCCCCee
Confidence                    12246789999999999999999875321   123588999999977788999999999987

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=100.00  E-value=6.8e-38  Score=312.10  Aligned_cols=186  Identities=28%  Similarity=0.440  Sum_probs=158.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|++... +..++|||+||+++||||||||+..    .+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~-~~~~~CgGsLI~~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~--~~~~~~v~~   73 (227)
T 1euf_A            1 IIGGHEAKPHSRPYMAFLLFKTS-GKSHICGGFLVREDFVLTAAHCLGS----SINVTLGAHNIMERER--TQQVIPVRR   73 (227)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESS-SSEEEEEEEEEETTEEEECGGGCCE----EEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCeECCCCCcCCEEEEEEeCC-CCceEEEEEEeeCCEEEECHHHCCC----CcEEEEcccccCCCCC--ccEEEEEEE
Confidence            78999999999999999986432 3378999999999999999999963    5889999988765433  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCC-CCCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN-FVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~-~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+...+.||||||||++|+.|+++|+|||||..... ..+..|+++|||.+..                     
T Consensus        74 i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~---------------------  132 (227)
T 1euf_A           74 PIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGV---------------------  132 (227)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSST---------------------
T ss_pred             EEeCCCCCCCCCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCC---------------------
Confidence            999999999899999999999999999999999999986543 3689999999999865                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       133 --------------------------------------------------------------------------------  132 (227)
T 1euf_A          133 --------------------------------------------------------------------------------  132 (227)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                             +...+..||++.++++++++|+..|.     ..+.++||||+...++.+.|+|||||++.
T Consensus       133 -------~~~~~~~L~~~~~~i~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~~~GDsGgPL~  187 (227)
T 1euf_A          133 -------NMPSTDKLQEVDLEVQSEEKCIARFK-----NYIPFTQICAGDPSKRKNSFSGDSGGPLV  187 (227)
T ss_dssp             -------TCCBCSBCEEEEEEBCCTHHHHTTCT-----TCCTTTEEEESCTTSCCBCCTTCTTCEEE
T ss_pred             -------CCCCchhheEeEeccccHHHhhHhhc-----CcCCCcEEEccCCCCCCcccccCCCCceE
Confidence                   23346789999999999999998764     24788999999765546778999999873

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=100.00  E-value=8.6e-38  Score=310.96  Aligned_cols=181  Identities=27%  Similarity=0.525  Sum_probs=154.8

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|+.    +..++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~--~~~~~~v~~   70 (225)
T 1npm_A            1 ILEGRECIPHSQPWQAALFQ----GERLICGGVLVGDRWVLTAAHCKK----QKYSVRLGDHSLQSRDQ--PEQEIQVAQ   70 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCC----SSCEEEESCSBTTC--C--CCEEECEEE
T ss_pred             CCCCEECCCCCcCcEEEEee----CCceEEEEEEECCCEEEEhHHcCC----CCceEEEeeeEcCCCCC--CcEEEEEEE
Confidence            78999999999999999975    347899999999999999999985    45889999988765433  468899999


Q ss_pred             EEECCCC-CC--CCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQF-DP--RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Y-n~--~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +++||+| +.  ....||||||||++++.|+++|+|||||.... ..+..|+++|||.+...                  
T Consensus        71 i~~Hp~y~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~-~~~~~~~v~GwG~~~~~------------------  131 (225)
T 1npm_A           71 SIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCP-KVGQKCIISGWGTVTSP------------------  131 (225)
T ss_dssp             EEECTTCCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECSSCC-CTTCEEEEEESSCSSSS------------------
T ss_pred             EEECCCCCCCCccCccccEEEEeeCCcccCCCceeceECCCCCC-CCCCEEEEEeCCcccCC------------------
Confidence            9999999 55  67889999999999999999999999997654 36999999999998541                  


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       132 --------------------------------------------------------------------------------  131 (225)
T 1npm_A          132 --------------------------------------------------------------------------------  131 (225)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               .+..+..||++.++++++++|+..|.     ..+.++||||+... +.++|+||||||+
T Consensus       132 ---------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~-~~~~C~GDSGgPL  184 (225)
T 1npm_A          132 ---------QENFPNTLNCAEVKIYSQNKCERAYP-----GKITEGMVCAGSSN-GADTCQGDSGGPL  184 (225)
T ss_dssp             ---------SCCCCSBCEEEEEEECCHHHHHHHST-----TTCCTTEEEEECTT-CCBCCTTCTTCEE
T ss_pred             ---------CCCCCccceEeEEeeecHHHhhHHhC-----CCCCCCEEeecCCC-CCeecCCCCCchh
Confidence                     23457889999999999999998874     25789999999644 6899999999987

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=100.00  E-value=3.8e-38  Score=318.27  Aligned_cols=190  Identities=31%  Similarity=0.580  Sum_probs=158.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|+..   +..++|||+||+++||||||||+.+  ...+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~---~~~~~CgGsLI~~~~VLTAAHC~~~--~~~~~v~~G~~~~~~~~~--~~~~~~v~~   73 (250)
T 1aut_C            1 LIDGKMTRRGDSPWQVVLLDS---KKKLACGAVLIHPSWVLTAAHCMDE--SKKLLVRLGEYDLRRWEK--WELDLDIKE   73 (250)
T ss_dssp             CBSCEECCTTSCTTEEEEECT---TSCEEEEEEEEETTEEEECGGGSSS--CSCCEEEESCCBTTCCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEecC---CCceEEEEEEeeCCEEEEChHHcCC--CCceEEEEcccccCCCCC--ccEEEEEEE
Confidence            789999999999999999742   3468999999999999999999975  356889999998765443  458899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC-----CCCCCEEEEEeccccCCCCccccCCCCccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT-----NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMA  545 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~-----~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~  545 (697)
                      +++||+|+...+.||||||||++|+.|+++|+|||||....     ...+..|+++|||.+..+..              
T Consensus        74 i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~--------------  139 (250)
T 1aut_C           74 VFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREK--------------  139 (250)
T ss_dssp             EEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCS--------------
T ss_pred             EEECCCCCCCCCCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCc--------------
Confidence            99999999988999999999999999999999999997532     13589999999999865200              


Q ss_pred             ccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccc
Q psy12777        546 TCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRR  625 (697)
Q Consensus       546 ~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~  625 (697)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (250)
T 1aut_C          140 --------------------------------------------------------------------------------  139 (250)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        626 RESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       626 ~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               ......+..||++.++++++++|+..|.     ..+.++||||+...++.++|+|||||++
T Consensus       140 ---------~~~~~~~~~L~~~~~~i~~~~~C~~~~~-----~~~~~~~~Cag~~~~~~~~C~GDSGGPL  195 (250)
T 1aut_C          140 ---------EAKRNRTFVLNFIKIPVVPHNECSEVMS-----NMVSENMLCAGILGDRQDACEGDSGGPM  195 (250)
T ss_dssp             ---------CCCSSCSSBCEEEEEEEECHHHHHHHCS-----SCCCTTEEEECCTTCCCBCCTTCTTCEE
T ss_pred             ---------cccccccceeeEEEEEEecHHHhhHHhc-----cCCCCCEEEeCCCCCCCCCCCCCCchhe
Confidence                     0011224589999999999999998764     2578999999976777899999999987

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=100.00  E-value=6.1e-38  Score=313.46  Aligned_cols=183  Identities=28%  Similarity=0.529  Sum_probs=156.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|+.    ...++|||+||+++||||||||+.+    ...|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~--~~~~~~v~~   70 (237)
T 2zch_P            1 IVGGWECEKHSQPWQVLVAS----RGRAVCGGVLVHPQWVLTAAHCIRN----KSVILLGRHSLFHPED--TGQVFQVSH   70 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEES----SSSEEEEEEEEETTEEEECGGGCCS----SCEEEESCSBSSSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEee----CCCeEEEEEEecCCEEEEcHHhcCC----CceEEEecccccCCCC--CcEEEEEEE
Confidence            78999999999999999975    2468999999999999999999964    3579999988765443  458899999


Q ss_pred             EEECCCCCCCCC-----------CCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCc
Q psy12777        471 VASHPQFDPRTF-----------EYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPA  539 (697)
Q Consensus       471 IiiHP~Yn~~t~-----------~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~  539 (697)
                      +++||+|+...+           .||||||||++|+.|+++|+|||||.... ..+..|+++|||.+..+          
T Consensus        71 ~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~~~~-~~~~~~~v~GwG~~~~~----------  139 (237)
T 2zch_P           71 SFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEP-ALGTTCYASGWGSIEPE----------  139 (237)
T ss_dssp             EEECTTSCGGGGTSSSCCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCSSCC-CTTCEEEEEESCCSSSS----------
T ss_pred             EecCCCcchhhhcccccccCCCCCcceEEEEeCCCCccCCcEeeeECCCCCC-CCCCEEEEEeCCccCCC----------
Confidence            999999986554           78999999999999999999999998654 36899999999998762          


Q ss_pred             ccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeee
Q psy12777        540 TRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI  619 (697)
Q Consensus       540 ~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~  619 (697)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (237)
T 2zch_P          140 --------------------------------------------------------------------------------  139 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        620 IQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       620 ~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                                       ....+..||++.|+++++++|++.|.     ..+.+.||||+...++.++|+||||||+.
T Consensus       140 -----------------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~  194 (237)
T 2zch_P          140 -----------------EFLTPKKLQCVDLHVISNDVCAQVHP-----QKVTKFMLCAGRWTGGKSTCSGDSGGPLV  194 (237)
T ss_dssp             -----------------SCCCCSBCEEEEEEEECHHHHHHHCS-----SBCCTTEEEEECTTCSCBCCTTCTTCEEE
T ss_pred             -----------------CCcCCcccEEeEEEEeCHHHhccccc-----CCCCceEEeecCCCCCCcccCCCccCeEE
Confidence                             12236789999999999999998763     25789999999777788999999999973

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=100.00  E-value=3.5e-38  Score=314.39  Aligned_cols=182  Identities=27%  Similarity=0.519  Sum_probs=159.0

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|++    +..++|||+||+++||||||||+.+  ...+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~v~~G~~~~~~~~~--~~~~~~v~~   72 (226)
T 1azz_A            1 IVGGVEAVPNSWPHQAALFI----DDMYFCGGSLISPEWILTAAHCMDG--AGFVDVVLGAHNIREDEA--TQVTIQSTD   72 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTTEEEEEEEEETTEEEECHHHHTT--CSCEEEEESCSBSSSCCT--TCEEEEECC
T ss_pred             CCCCEECCCCCcCCEEEEEE----CCcEEEEEEEecCCEEEEhHHhcCC--CCceEEEEcceEcCCCCC--ccEEEEEEE
Confidence            78999999999999999986    3468999999999999999999975  457899999988765432  357889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++|+.|+++++|||||.... ..+..|+++|||.+...                     
T Consensus        73 i~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~---------------------  130 (226)
T 1azz_A           73 FTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDV-GVGTVVTPTGWGLPSDS---------------------  130 (226)
T ss_dssp             EEECTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSCC-CTTCEEEEEESSCSSTT---------------------
T ss_pred             EEECCCCCCCCCCCceEEEEECCccccCCCcccccCCCCCC-CCCCEEEEEeCCccCCC---------------------
Confidence            99999999888999999999999999999999999998764 46999999999998652                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (226)
T 1azz_A          131 --------------------------------------------------------------------------------  130 (226)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            ....+..||++.++++++++|+..|.      .+.++||||+. .++.++|+||||||+
T Consensus       131 ------~~~~~~~L~~~~~~i~~~~~C~~~~~------~~~~~~~Ca~~-~~~~~~C~GDSGgPL  182 (226)
T 1azz_A          131 ------ALGISDVLRQVDVPIMSNADCDAVYG------IVTDGNICIDS-TGGKGTCNGDSGGPL  182 (226)
T ss_dssp             ------CSSSCSBCEECCEEEECHHHHHHHHS------CCCTTEEEECC-TTTCBCCTTCTTCEE
T ss_pred             ------CCCCCchhEEeeEEEEChhHhhhhhC------cCCCceEeecC-CCCCccCCCCCCcce
Confidence                  12356789999999999999998873      47899999985 567899999999987

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=100.00  E-value=8.3e-38  Score=314.29  Aligned_cols=193  Identities=25%  Similarity=0.430  Sum_probs=160.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEec--CCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCCCCCCCCcEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIR--STYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLSTEEEPYGYQERR  467 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~--~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~~~~~~~~q~~~  467 (697)
                      |+||..|..++|||||+|++...  ....++|||+||+++||||||||+... ....+.|++|.++......  ..+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~--~~~~~~   78 (252)
T 1rtf_B            1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGE--EEQKFE   78 (252)
T ss_dssp             CBSSEECCGGGSTTEEEEEEEC----CEEEEEEEEECSSSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCT--TCEEEE
T ss_pred             CCCCeECCCCCcCCEEEEEEecCCCCCCCEEEEEEEEeCCEEEECHHHCCCCCCcccEEEEeCcccccCCCC--cceEEE
Confidence            78999999999999999986422  235689999999999999999999753 3567899999987764433  458899


Q ss_pred             EEEEEECCCCCCCCCCCceEEEecCcc----cccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCcccc
Q psy12777        468 VQIVASHPQFDPRTFEYDLALLRFYEP----VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQ  542 (697)
Q Consensus       468 V~~IiiHP~Yn~~t~~nDIALLrL~~P----V~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~  542 (697)
                      |.++++||+|+...+.||||||||+++    +.|+++|+|||||.....+ .+..|+++|||.+...             
T Consensus        79 v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~-------------  145 (252)
T 1rtf_B           79 VEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEAL-------------  145 (252)
T ss_dssp             EEEEEECTTCCTTTCTTCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTT-------------
T ss_pred             EEEEEeCCCCCcCCCCCCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCC-------------
Confidence            999999999999899999999999999    8999999999999876443 5889999999998752             


Q ss_pred             cccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeec
Q psy12777        543 EMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN  622 (697)
Q Consensus       543 ~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~  622 (697)
                                                                                                      
T Consensus       146 --------------------------------------------------------------------------------  145 (252)
T 1rtf_B          146 --------------------------------------------------------------------------------  145 (252)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCC------CCCCcccCCCCC
Q psy12777        623 CRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGS------FDSCEEHARDGT  695 (697)
Q Consensus       623 ~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~------~dtCqGDSGgg~  695 (697)
                                    ....+..||++.|++++.++|+..+..   ...+.++||||+...++      .++|+||||||+
T Consensus       146 --------------~~~~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL  207 (252)
T 1rtf_B          146 --------------SPFYSERLKEAHVRLYPSSRCTSQHLL---NRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPL  207 (252)
T ss_dssp             --------------CSSCCSBCEEEEEEECCGGGSSTTTTT---TCCCCTTEEEEECCC------CCCBCCTTCTTCEE
T ss_pred             --------------CccccchheEeeeEEecHHHhhhhhcc---CCCCCCCEEEecCCCCCCccCCCCccccCCCcCce
Confidence                          223467899999999999999986532   23578999999976554      799999999987

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=100.00  E-value=1.3e-37  Score=310.08  Aligned_cols=184  Identities=29%  Similarity=0.500  Sum_probs=157.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|++.   ...++|||+||+++||||||||+.    ..+.|++|.+++....+. ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~---~~~~~CgGtLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~-~~~~~~v~~   72 (227)
T 2psx_A            1 IINGSDCDMHTQPWQAALLLR---PNQLYCGAVLVHPQWLLTAAHCRK----KVFRVRLGHYSLSPVYES-GQQMFQGVK   72 (227)
T ss_dssp             CBTCEECCTTSCTTEEEEEET---TTEEEEEEEEEETTEEEECGGGCC----SSCEEEESCCBSSCCCCT-TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEec---CCCceEEEEEEcCCEEEEhHHcCC----CCcEEEEeeeecccCCCC-CcEEEEEEE
Confidence            789999999999999999763   246899999999999999999986    357899999887653221 457899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++++.|+++|+|||||.... ..+..|+++|||.+..+                     
T Consensus        73 ~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~~---------------------  130 (227)
T 2psx_A           73 SIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCP-SAGTKCLVSGWGTTKSP---------------------  130 (227)
T ss_dssp             EEECTTCCSSSCTTCCEEEEESSCCCCCSSSCCCCBCSSCC-CTTCEEEEEESSCSSSS---------------------
T ss_pred             EEeCCCCCCCCCCCCEEEEEeCCCCCCCCceeeeECCCCCC-CCCCEEEEEeCcccCCC---------------------
Confidence            99999999888999999999999999999999999996543 36899999999998762                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (227)
T 2psx_A          131 --------------------------------------------------------------------------------  130 (227)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                            ....+..||++.++++++++|+..|.     ..+.+.||||+. .++.++|+|||||++.
T Consensus       131 ------~~~~~~~L~~~~~~i~~~~~C~~~~~-----~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~  184 (227)
T 2psx_A          131 ------QVHFPKVLQCLNISVLSQKRCEDAYP-----RQIDDTMFCAGD-KAGRDSCQGDSGGPVV  184 (227)
T ss_dssp             ------SCCCCSBCEEEEEEBCCHHHHHHHST-----TTCCTTEEEECC-STTCBCCTTCTTCEEE
T ss_pred             ------CCCCCchheEEEEEecCHhHhhhhcC-----CCCCCCEEcccC-CCCCccCCCCCCccee
Confidence                  12456889999999999999998774     257899999995 5678999999999873

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=100.00  E-value=1e-37  Score=308.74  Aligned_cols=185  Identities=23%  Similarity=0.412  Sum_probs=157.0

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|++....+..++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~----~~~~v~~G~~~~~~~~~--~~~~~~v~~   74 (226)
T 4ag1_A            1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLGAHNITEEED--TWQKLEVIK   74 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEEECSSSSCEEEEEEEEETTEEEECGGGCC----SEEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEEcCCCcccEEEEEEEeCCEEEECcccCC----CCeEEEeCCcccCCCCC--cceEEEEEE
Confidence            789999999999999999875544447899999999999999999994    46899999998766444  458899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+...+.||||||||++++.|+++++|||||.....+ .+..|+++|||.+..+                    
T Consensus        75 ~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~--------------------  134 (226)
T 4ag1_A           75 QFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVL--------------------  134 (226)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTT--------------------
T ss_pred             EEeCCCCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCC--------------------
Confidence            9999999999999999999999999999999999999876533 6999999999998662                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       135 --------------------------------------------------------------------------------  134 (226)
T 4ag1_A          135 --------------------------------------------------------------------------------  134 (226)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              +..+..||++.+++++.++|+...      ....+.||||+...++.++|+|||||++
T Consensus       135 --------~~~~~~L~~~~~~~~~~~~C~~~~------~~~~~~~~Ca~~~~~~~~~C~GDsGgPl  186 (226)
T 4ag1_A          135 --------KPGSDTLQEVKLRLMDPQACSHFR------DFDHNLQLCVGNPRKTKSAFKGDSGGPL  186 (226)
T ss_dssp             --------SCBCSBCEEEEEEEECGGGGTTST------TCCTTTEEEESCTTSCCBCCTTCTTCEE
T ss_pred             --------CCCCCEeEEEEEEEcChHHccccc------CcCccceEeeccCCCCCcCccCCCCCce
Confidence                    334678999999999999998432      2357899999987788999999999987

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=100.00  E-value=2e-37  Score=308.63  Aligned_cols=181  Identities=27%  Similarity=0.515  Sum_probs=156.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|+.    +..++|||+||+++||||||||+.    ..+.|++|.+++...    ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~----~~~~~~v~~   68 (224)
T 2qxi_A            1 IIDGAPCARGSHPWQVALLS----GNQLHCGGVLVNERWVLTAAHCKM----NEYTVHLGSDTLGDR----RAQRIKASK   68 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCC----SCEEEEESCSBTTCT----TSEEEEECE
T ss_pred             CCCCeECCCCCCCCEEEEee----CCCeEEEEEEecCCEEEEhHHcCC----CCcEEEEeeeecCCC----ccEEEEEEE
Confidence            78999999999999999953    234589999999999999999994    468999999877522    357889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++|+.|+++++|||||.... ..+..|+++|||.+...                     
T Consensus        69 ~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~---------------------  126 (224)
T 2qxi_A           69 SFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCE-PPGTTCTVSGWGTTTSP---------------------  126 (224)
T ss_dssp             EEECTTCCTTTCTTCCEEEECSSCCCCBTTBCCCCCCSSCC-CTTCEEEEEESSCSSSS---------------------
T ss_pred             EEECCCCCCCCCcCcEEEEEeCCCCcCCCceeeEECCCCCC-CCCCEEEEEeCCccCCC---------------------
Confidence            99999999988999999999999999999999999998754 36899999999998641                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       127 --------------------------------------------------------------------------------  126 (224)
T 2qxi_A          127 --------------------------------------------------------------------------------  126 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                            ....+..||++.+++++.++|+..|.     ..+.+.||||+...++.++|+||||||+.
T Consensus       127 ------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~  181 (224)
T 2qxi_A          127 ------DVTFPSDLMCVDVKLISPQDCTKVYK-----DLLENSMLCAGIPDSKKNACNGDSGGPLV  181 (224)
T ss_dssp             ------SCCCCSBCEEEEEEEECHHHHHHHHG-----GGCCTTEEEEECTTCCCBCCTTCTTCEEE
T ss_pred             ------CCCCChhheEEEeeecCHHHhhHHhc-----CcCCCCeEEecCCCCCCccCCCCccccEE
Confidence                  23456889999999999999998874     24789999999767778999999999873

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=100.00  E-value=1.1e-37  Score=309.71  Aligned_cols=183  Identities=31%  Similarity=0.540  Sum_probs=157.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|+.    .+.++|||+||+++||||||||+.+.....+.|++|.+++..     ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~-----~~~~~~v~~   71 (224)
T 1pq7_A            1 IVGGTSASAGDFPFIVSISR----NGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTS-----GGITSSLSS   71 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSS-----SSEEECEEE
T ss_pred             CCCCEECCCCCcCeEEEEEE----CCCeEEEEEEecCCEEEEcHHccCCCCCCceEEEeCcceecC-----CCEEEEEEE
Confidence            78999999999999999975    347899999999999999999998766677999999987732     358899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC-CCCCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT-NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~-~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+..  .||||||||++++.|+++++|||||.... ...+..|+++|||.+..+                    
T Consensus        72 i~~hp~y~~~--~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~--------------------  129 (224)
T 1pq7_A           72 VRVHPSYSGN--NNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEG--------------------  129 (224)
T ss_dssp             EEECTTCBTT--BTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTT--------------------
T ss_pred             EEECCCCCCC--CCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCC--------------------
Confidence            9999999866  89999999999999999999999995332 236899999999998762                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       130 --------------------------------------------------------------------------------  129 (224)
T 1pq7_A          130 --------------------------------------------------------------------------------  129 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             ....+..||++.++++++++|+..|..    ..+.+.||||+...++.++|+||||||+
T Consensus       130 -------~~~~~~~l~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  184 (224)
T 1pq7_A          130 -------GSSTPVNLLKVTVPIVSRATCRAQYGT----SAITNQMFCAGVSSGGKDSCQGDSGGPI  184 (224)
T ss_dssp             -------CSCCCSBCEEEEEEEECHHHHHHHHCT----TTSCTTEEEECCTTCCCBCCTTCTTCEE
T ss_pred             -------CCcccceeeEeEEEEEcHHHhhHhhcC----CCCCCCeEEeecCCCCCCCCcCCCCcce
Confidence                   123467899999999999999988742    2478999999976778899999999997

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=100.00  E-value=1.4e-38  Score=319.02  Aligned_cols=184  Identities=26%  Similarity=0.509  Sum_probs=132.2

Q ss_pred             CCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        389 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       389 ~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      .||+||.++..++|||||+|+ .   .+.++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|
T Consensus         2 arIvgG~~a~~~~~Pw~v~l~-~---~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~--~~~~~~v   71 (240)
T 1sgf_A            2 APPVQSQVDCENSQPWHVAVY-R---FNKYQCGGVLLDRNWVLTAAHCYN----DKYQVWLGKNNFLEDEP--SDQHRLV   71 (240)
T ss_dssp             -----------CCCTTEEEEE-C---TTSCCEEEEECSSSEEEECGGGCC----SCCEEEECC----C-CT--TCEEEEE
T ss_pred             CcccCCeECCCCCcCCEEEEE-e---CCCeEEEEEEecCCEEEECHHhCC----CCceEEeCCcccccCCC--CceEEEE
Confidence            589999999999999999993 2   246899999999999999999996    35789999988754332  3588999


Q ss_pred             EEEEECCCCCCC-----------CCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCC
Q psy12777        469 QIVASHPQFDPR-----------TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGH  537 (697)
Q Consensus       469 ~~IiiHP~Yn~~-----------t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~  537 (697)
                      .++++||+|+..           .+.||||||||++|+.|+++|+|||||.... ..+..|+++|||.+...        
T Consensus        72 ~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~--------  142 (240)
T 1sgf_A           72 SKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEP-KLGSTCLASGWGSTTPI--------  142 (240)
T ss_dssp             EEEEECTTSCGGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCSCC-CTTCEEEEC-------C--------
T ss_pred             EEEEcCCCCcccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCCCCC-CCCCEEEEEecCCCCCC--------
Confidence            999999999865           6789999999999999999999999998754 36899999999998652        


Q ss_pred             CcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccccccee
Q psy12777        538 PATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQII  617 (697)
Q Consensus       538 p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i  617 (697)
                                                                                                      
T Consensus       143 --------------------------------------------------------------------------------  142 (240)
T 1sgf_A          143 --------------------------------------------------------------------------------  142 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        618 PIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       618 ~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                         ....+..||++.|+++++++|+..|.     ..+.+.||||+...++.++|+||||||+
T Consensus       143 -------------------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  196 (240)
T 1sgf_A          143 -------------------KFKYPDDLQCVNLKLLPNEDCDKAHE-----MKVTDAMLCAGEMDGGSYTCEHDSGGPL  196 (240)
T ss_dssp             ----------------------------CEEEEEECTHHHHTTCS-----SBCCTTEEEEEECSSSEEECCCCTTCEE
T ss_pred             -------------------CCCCCccccEEeeeEeCHHHhhhhhC-----CCcCCCeEeEccCCCCCCCCCCCCcCcE
Confidence                               12346789999999999999998653     2578999999987777899999999987

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=100.00  E-value=5.3e-38  Score=314.64  Aligned_cols=185  Identities=30%  Similarity=0.592  Sum_probs=158.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|+..   ...++|||+||+++||||||||+..  ...+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~---~~~~~CgGtLIs~~~VLTAAhC~~~--~~~~~V~~G~~~~~~~~~--~~~~~~v~~   73 (241)
T 2jkh_A            1 IVGGQECKDGECPWQALLINE---ENEGFCGGTILSEFYILTAAHCLYQ--AKRFKVRVGDRNTEQEEG--GEAVHEVEV   73 (241)
T ss_dssp             CBSSEECCTTSSTTEEEEECT---TSCEEEEEEECSSSEEEECGGGGGS--CSSCEEEESCSBTTCCCS--CCEEECEEE
T ss_pred             CCCCEECCCCCcCcEEEEEcC---CCCcEEEEEEeeCCEEEEcHHHcCC--CCcEEEEECCccCCCCCC--CcEEEEeEE
Confidence            789999999999999999742   3468999999999999999999975  346899999988765433  457889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC----CCCCCEEEEEeccccCCCCccccCCCCcccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT----NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMAT  546 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~----~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~  546 (697)
                      +++||+|+...+.||||||||++|+.|+++|+|||||....    ...+..|+++|||.+..                  
T Consensus        74 i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~------------------  135 (241)
T 2jkh_A           74 VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHE------------------  135 (241)
T ss_dssp             EEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSST------------------
T ss_pred             EEeCCCCCCCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCC------------------
Confidence            99999999988999999999999999999999999997542    22588999999999865                  


Q ss_pred             cccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccc
Q psy12777        547 CWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRR  626 (697)
Q Consensus       547 C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~  626 (697)
                                                                                                      
T Consensus       136 --------------------------------------------------------------------------------  135 (241)
T 2jkh_A          136 --------------------------------------------------------------------------------  135 (241)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        627 ESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       627 ~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                .+..+..||++.++++++++|+..+.     ..+.++||||+...++.++|+|||||++
T Consensus       136 ----------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl  189 (241)
T 2jkh_A          136 ----------KGEQSTRLKMLEVPYVDRNSCKLSSS-----FIITQNMFCAGYDTKQEDACQGDSGGPH  189 (241)
T ss_dssp             ----------TSCBCSBCEEEEEEEECHHHHHHHCS-----SCCCTTEEEESCSSSSCBCCTTTTTCEE
T ss_pred             ----------CCCcCccccEeeeccccHHHhccccc-----CcCCCCeEEeeCCCCCCccCcCcCCCee
Confidence                      23346789999999999999998763     2578999999976677899999999986

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=100.00  E-value=3.7e-38  Score=314.16  Aligned_cols=184  Identities=34%  Similarity=0.679  Sum_probs=157.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||+|+|..    ...++|||+||+++||||||||+..  ...+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAhC~~~--~~~~~v~~G~~~~~~~~~--~~~~~~v~~   72 (235)
T 2wph_S            1 VVGGEDAKPGQFPWQVVLNG----KVDAFCGGSIVNEKWIVTAAHCVET--GVKITVVAGEHNIEETEH--TEQKRNVIR   72 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEES----SSTTCEEEEEEETTEEEECGGGCCT--TSCCEEEESCCBTTSCCS--CCEEEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEcc----CCCeeEEEEEEeCCEEEECHHHCcC--CCCEEEEEcccccCCCCC--CcEEeeeEE
Confidence            78999999999999999975    2357899999999999999999975  346899999988765443  468899999


Q ss_pred             EEECCCCCC--CCCCCceEEEecCcccccCCCeeeeecCCCCCC---CCCCEEEEEeccccCCCCccccCCCCccccccc
Q psy12777        471 VASHPQFDP--RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN---FVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMA  545 (697)
Q Consensus       471 IiiHP~Yn~--~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~---~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~  545 (697)
                      +++||+|+.  ..+.||||||||++|+.|+++|+|||||.....   ..+..|+++|||.+..                 
T Consensus        73 i~~Hp~y~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~-----------------  135 (235)
T 2wph_S           73 IIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFH-----------------  135 (235)
T ss_dssp             EEECTTTTSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSST-----------------
T ss_pred             EEeCCCCcccCCcCCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccC-----------------
Confidence            999999997  678899999999999999999999999975432   1478999999999865                 


Q ss_pred             ccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccc
Q psy12777        546 TCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRR  625 (697)
Q Consensus       546 ~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~  625 (697)
                                                                                                      
T Consensus       136 --------------------------------------------------------------------------------  135 (235)
T 2wph_S          136 --------------------------------------------------------------------------------  135 (235)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        626 RESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       626 ~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                 .+..+..||++.++++++++|++.+.     ..+.++||||+...++.++|+|||||++
T Consensus       136 -----------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl  189 (235)
T 2wph_S          136 -----------KGRSALVLQYLRVPLVDRATCLRSTK-----FTITNNMFCAGFHEGGRDSCQGDSGGPH  189 (235)
T ss_dssp             -----------TSCBCSBCEEEEEEEECHHHHHHTCS-----SCCCTTEEEESCTTCSCBCCTTCTTCEE
T ss_pred             -----------CCCccchheEeeeeeeCHHHhcCccc-----CCCCCCEEEeCCCCCCCccCCCCCCCce
Confidence                       23446789999999999999998763     2578999999976778899999999986

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=100.00  E-value=1.5e-38  Score=336.16  Aligned_cols=202  Identities=30%  Similarity=0.576  Sum_probs=161.6

Q ss_pred             CCccccCCCcCC---CCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-----CCCceE
Q psy12777        375 SNYKEVCGRRLF---PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-----PPSDLL  446 (697)
Q Consensus       375 s~~~~~CG~~~~---~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-----~~~~l~  446 (697)
                      ..+...||+...   ...||+||.+|..++|||||+|..      .++|||+||+++||||||||+...     ....+.
T Consensus        71 ~~c~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~------~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~  144 (329)
T 1md8_A           71 PRCLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNI------HGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLD  144 (329)
T ss_dssp             CCEEECCSCCSSCCCCC--CBSCCBCCTTSCTTEEEEES------SSEEEEEEETTTEEEECGGGTSCTTC-----CCCC
T ss_pred             CCCCCCCCCCCCcccccccccCCEECCCCCCCCeEeecc------CCCcceEEecCCEEEecCCEEEeCCcccCCCceEE
Confidence            345568998642   357999999999999999999864      247999999999999999999732     245678


Q ss_pred             EEEccccCCCCCCCCCcEEEEEEEEEECCCCCCC---CCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEe
Q psy12777        447 LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR---TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTG  522 (697)
Q Consensus       447 V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~---t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtG  522 (697)
                      |++|.+++....   ..+.+.|.++++||+|+..   .+.||||||||++|+.|+++|+|||||.....+ .+..|+|+|
T Consensus       145 V~~G~~~~~~~~---~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~G  221 (329)
T 1md8_A          145 VFLGHTNVEELM---KLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSG  221 (329)
T ss_dssp             EEESCSBHHHHH---HHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEE
T ss_pred             EEeccccccccc---cccceeeEEEEECCCcccccCCCCCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEe
Confidence            999987653211   1245679999999999864   678999999999999999999999999765433 588999999


Q ss_pred             ccccCCCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEE
Q psy12777        523 WGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWA  602 (697)
Q Consensus       523 WG~t~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~V  602 (697)
                      ||.+..                                                                          
T Consensus       222 WG~t~~--------------------------------------------------------------------------  227 (329)
T 1md8_A          222 FGVMEE--------------------------------------------------------------------------  227 (329)
T ss_dssp             CCBCSS--------------------------------------------------------------------------
T ss_pred             CCCCCC--------------------------------------------------------------------------
Confidence            998764                                                                          


Q ss_pred             EeecccccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCC
Q psy12777        603 VTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKG  682 (697)
Q Consensus       603 LSAAHC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g  682 (697)
                                                        .  .+..||++.|+++++++|+..|........+.++||||+...+
T Consensus       228 ----------------------------------~--~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~~~  271 (329)
T 1md8_A          228 ----------------------------------K--IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSL  271 (329)
T ss_dssp             ----------------------------------S--BCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTC
T ss_pred             ----------------------------------C--CCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecCCC
Confidence                                              1  3578999999999999999987543223357899999997667


Q ss_pred             CCCCCcccCCCCC
Q psy12777        683 SFDSCEEHARDGT  695 (697)
Q Consensus       683 ~~dtCqGDSGgg~  695 (697)
                      +.|+|+|||||++
T Consensus       272 ~~d~C~GDSGGPL  284 (329)
T 1md8_A          272 KQDACQGDSGGVF  284 (329)
T ss_dssp             SCBCCTTTTTCEE
T ss_pred             CCcCCCCccccce
Confidence            8899999999987

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=100.00  E-value=1.8e-37  Score=306.37  Aligned_cols=181  Identities=29%  Similarity=0.599  Sum_probs=158.8

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|..     ..++|+|+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-----~~~~C~GtLI~~~~VLTAAhC~~----~~~~v~~g~~~~~~~~~--~~~~~~v~~   69 (223)
T 4i8h_A            1 IVGGYTCGANTVPYQVSLNS-----GYHFCGGSLINSQWVVSAAHCYK----SGIQVRLGEDNINVVEG--NEQFISASK   69 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEES-----SSEEEEEEECSSSEEEECGGGCC----SSCEEEESCSSTTSCCS--CCEEEEEEE
T ss_pred             CCCCEECCCCCCCeEEEecC-----CCcEEEEEEEcCCEEEecHHhCC----CCcEEEEccccccccCC--CcEEEEEeE
Confidence            78999999999999999962     35789999999999999999996    36889999988765443  467899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++++.|+++++|||||.... ..+..|+++|||.+..+                     
T Consensus        70 ~~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~~---------------------  127 (223)
T 4i8h_A           70 SIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCA-SAGTQCLISGWGNTKSS---------------------  127 (223)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCC-CTTCEEEEEESSCCCSS---------------------
T ss_pred             EEECcCCCCCCCcCCEEEEEECCcCcCCCceeceECCCCCC-CCCCEEEEEecccccCC---------------------
Confidence            99999999999999999999999999999999999998764 36999999999998762                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       128 --------------------------------------------------------------------------------  127 (223)
T 4i8h_A          128 --------------------------------------------------------------------------------  127 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            ....+..||++.++++++++|+..|.     ..+.++||||+...++.++|+|||||++
T Consensus       128 ------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl  181 (223)
T 4i8h_A          128 ------GTSYPDVLKCLKAPILSDSSCKSAYP-----GQITSNMFCAGYLEGGKDSCQGDSGGPV  181 (223)
T ss_dssp             ------SCCCCSSCEEEEEEBCCHHHHHHHST-----TTCCTTEEEESCTTSSCBCCTTCTTCEE
T ss_pred             ------CCCccccceEEEeeecCHHHHHHhhC-----CCCCCCeEeccCCCCCCccCCCCCCCcE
Confidence                  23456789999999999999998874     2588999999977888999999999987

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=100.00  E-value=1.3e-37  Score=310.81  Aligned_cols=180  Identities=29%  Similarity=0.575  Sum_probs=155.9

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||||+|+.    +  ++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~--~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~--~~~~~~v~~   68 (235)
T 1ton_A            1 IVGGYKCEKNSQPWQVAVIN----E--YLCGGVLIDPSWVITAAHCYS----NNYQVLLGRNNLFKDEP--FAQRRLVRQ   68 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEES----S--SEEEEEEEETTEEEECGGGCC----SCCEEEESCSBTTSCCT--TCEEECEEE
T ss_pred             CCCCEECCCCCcCcEEEEcc----C--CeEEEEEecCCEEEEcHHhCC----CCcEEEeCcccccCCCC--cceEEEEEE
Confidence            78999999999999999964    2  889999999999999999994    46789999988764332  357889999


Q ss_pred             EEECCCCCC-----------CCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCc
Q psy12777        471 VASHPQFDP-----------RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPA  539 (697)
Q Consensus       471 IiiHP~Yn~-----------~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~  539 (697)
                      +++||+|+.           ..+.||||||||++|+.|+++|+|||||.... ..+..|+++|||.+..+          
T Consensus        69 i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~----------  137 (235)
T 1ton_A           69 SFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEP-KVGSTCLASGWGSTNPS----------  137 (235)
T ss_dssp             EEECTTCCCC--------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCSCC-CTTCEEEEEESSCSSSS----------
T ss_pred             EEeCCCCcccccccccccccCCCcCCEEEEEcCCccccCCcceeeeCCCCCC-CCCCEEEEEecCCCCCC----------
Confidence            999999987           67889999999999999999999999998754 36899999999998652          


Q ss_pred             ccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeee
Q psy12777        540 TRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI  619 (697)
Q Consensus       540 ~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~  619 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (235)
T 1ton_A          138 --------------------------------------------------------------------------------  137 (235)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        620 IQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       620 ~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                       ....+..||++.++++++++|+..|.     ..+.+.||||+...++.++|+|||||++
T Consensus       138 -----------------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  191 (235)
T 1ton_A          138 -----------------EMVVSHDLQCVNIHLLSNEKCIETYK-----DNVTDVMLCAGEMEGGKDTCAGDSGGPL  191 (235)
T ss_dssp             -----------------SCCCCSBCEEEEEEEECGGGCGGGGS-----TTGGGGEEEEECTTCSCBCCTTCTTCEE
T ss_pred             -----------------CCccCccceEEEEEEeCHHHHHHHhc-----CcCCCCeEeeccCCCCCcCCCCCCcccc
Confidence                             23456789999999999999998774     2478999999976678899999999987

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=100.00  E-value=1.7e-37  Score=311.86  Aligned_cols=189  Identities=25%  Similarity=0.479  Sum_probs=160.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||.+|..++|||||+|+..     .++|||+||+++||||||||+.+.. ...+.|++|.+++....+  ..+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-----~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~--~~~~~~v~   73 (248)
T 2r0l_A            1 IIGGSSSLPGSHPWLAAIYIG-----DSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTD--VTQTFGIE   73 (248)
T ss_dssp             CBSCEECCTTSSTTEEEEEET-----TEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCS--SCEEECEE
T ss_pred             CCCCccCCCCCCCeEEEEEcC-----CceEEEEEEcCCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCC--ccEEEeee
Confidence            789999999999999999752     5789999999999999999997643 467899999998865443  46889999


Q ss_pred             EEEECCCCCC-CCCCCceEEEecCcc----cccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccc
Q psy12777        470 IVASHPQFDP-RTFEYDLALLRFYEP----VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQE  543 (697)
Q Consensus       470 ~IiiHP~Yn~-~t~~nDIALLrL~~P----V~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~  543 (697)
                      ++++||+|+. ....||||||||+++    +.|+++|+|||||.....+ .+..|+++|||.+..+              
T Consensus        74 ~i~~hp~y~~~~~~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~--------------  139 (248)
T 2r0l_A           74 KYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDEN--------------  139 (248)
T ss_dssp             EEEECTTCCTTSTTTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSS--------------
T ss_pred             EEEeCCccCcCCCCCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCC--------------
Confidence            9999999997 778999999999999    8999999999999865443 6899999999998762              


Q ss_pred             ccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecc
Q psy12777        544 MATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNC  623 (697)
Q Consensus       544 s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~  623 (697)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (248)
T 2r0l_A          140 --------------------------------------------------------------------------------  139 (248)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        624 RRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       624 ~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                                   ....+..||++.++++++++|+..+.+   ...+.++||||+...++.++|+|||||++.
T Consensus       140 -------------~~~~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~  196 (248)
T 2r0l_A          140 -------------VSGYSSSLREALVPLVADHKCSSPEVY---GADISPNMLCAGYFDCKSDACQGDSGGPLA  196 (248)
T ss_dssp             -------------CCSCCSBCEEEEEEBCCHHHHTSTTTT---GGGCCTTEEEESCSSSCCBCCTTCTTCEEE
T ss_pred             -------------CCCCCchheEEEEeeeCHHHhCCcccc---CCcCCCCEEeECCCCCCCcCCCCccCCeEE
Confidence                         123467899999999999999875321   235789999999767778999999999873

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=100.00  E-value=1.2e-37  Score=312.83  Aligned_cols=191  Identities=34%  Similarity=0.630  Sum_probs=157.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccC--CCCCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~--~~~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      |+||.+|..++|||||+|++.. ....|+|||+||+++||||||||+..  .....+.|++|.+++..     ..+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~-~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~-----~~~~~~v   74 (245)
T 2f9n_A            1 IVGGQEAPRSKWPWQVSLRVRD-RYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYY-----QDQLLPV   74 (245)
T ss_dssp             CBSCEECCTTSCTTEEEEEEES-SSEEEEEEEEEEETTEEEECGGGGCSSCCCGGGEEEECSCSBTTT-----TCCCBCE
T ss_pred             CCCCeECCCCCCCcEEEEEEcC-CCcceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEEeCCccccc-----CceEEEE
Confidence            7899999999999999998642 23478999999999999999999964  23457899999887653     2356789


Q ss_pred             EEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        469 QIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       469 ~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      .++++||+|+...+.||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..+.                 
T Consensus        75 ~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-----------------  137 (245)
T 2f9n_A           75 SRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDE-----------------  137 (245)
T ss_dssp             EEEEECTTCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTB-----------------
T ss_pred             EEEEECCCccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCC-----------------
Confidence            999999999988899999999999999999999999999765443 58999999999987620                 


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (245)
T 2f9n_A          138 --------------------------------------------------------------------------------  137 (245)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcc----cCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFI----EHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~----~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               ....+..||++.|+++++++|+..|....+.    ..+.+.||||+  .++.|+|+||||||+
T Consensus       138 ---------~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~--~~~~~~C~GDSGgPL  198 (245)
T 2f9n_A          138 ---------PLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAG--NSQRDSCQGDSGGPL  198 (245)
T ss_dssp             ---------CCCTTCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEEC--CSSSBCCTTCTTCEE
T ss_pred             ---------CCCccccceEEEEEEcCHHHhhhhhcccccccccccccccccEeec--CCCCCcCCCCCCCce
Confidence                     1122458999999999999999987532111    24789999998  356899999999987

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=100.00  E-value=1.5e-37  Score=335.07  Aligned_cols=201  Identities=28%  Similarity=0.531  Sum_probs=167.8

Q ss_pred             CccccCCCcCC-CCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC--CCCceEEEEccc
Q psy12777        376 NYKEVCGRRLF-PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV--PPSDLLLRLGEH  452 (697)
Q Consensus       376 ~~~~~CG~~~~-~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~--~~~~l~V~LG~~  452 (697)
                      .+...||.... ...||+||.+|..++|||||+|+.      .++|||+||+++||||||||+...  ....+.|++|.+
T Consensus       146 ~C~~~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~------~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~V~~G~~  219 (403)
T 1zjk_A          146 VCEPVCGLSARTTGGQIYGGQKAKPGDFPWQVLILG------GTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTL  219 (403)
T ss_dssp             EEEECCCCCSSCCSCCCSSCEECCTTSSTTEEEEEE------SCCEEEEEETTTEEEECHHHHGGGTTCSTTEEEEESCS
T ss_pred             CCCCCCCCCCCCCCccccCCcCCCCCCcCCEeEecc------CCceEEEEecCCEEEEcHHhCCCCCCCcceEEEEcccc
Confidence            33458998754 257999999999999999999975      367999999999999999999753  256789999998


Q ss_pred             cCCCCCCCCCcEEEEEEEEEECCCCCCC-CCCCceEEEecCcccccCCCeeeeecCCCCCC---CCCCEEEEEeccccCC
Q psy12777        453 DLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIPICVPEDDTN---FVGTSAHVTGWGRLYE  528 (697)
Q Consensus       453 dl~~~~~~~~~q~~~V~~IiiHP~Yn~~-t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~---~~G~~c~VtGWG~t~~  528 (697)
                      +....    ..+.+.|.++++||+|+.. .+.||||||||++++.|+++|+|||||.....   ..+..|+|+|||.+..
T Consensus       220 ~~~~~----~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~  295 (403)
T 1zjk_A          220 KRLSP----HYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQR  295 (403)
T ss_dssp             BTTCS----CCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSS
T ss_pred             ccCCC----CceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCC
Confidence            64221    3588999999999999987 78999999999999999999999999976532   3589999999999865


Q ss_pred             CCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccc
Q psy12777        529 GRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC  608 (697)
Q Consensus       529 g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC  608 (697)
                                                                                                      
T Consensus       296 --------------------------------------------------------------------------------  295 (403)
T 1zjk_A          296 --------------------------------------------------------------------------------  295 (403)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCC-cccCcCCCeEEEeeCCCCCCCC
Q psy12777        609 VEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAG-FIEHIPEIFICAGWRKGSFDSC  687 (697)
Q Consensus       609 ~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~-~~~~i~~~~ICAG~~~g~~dtC  687 (697)
                                                   +..+..||++.|+++++++|+..|.... ....+.++||||+...++.|+|
T Consensus       296 -----------------------------~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C  346 (403)
T 1zjk_A          296 -----------------------------GFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC  346 (403)
T ss_dssp             -----------------------------SCCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCCTTSC
T ss_pred             -----------------------------CccCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCCCCCC
Confidence                                         1346789999999999999999875321 1125889999999877789999


Q ss_pred             cccCCCCC
Q psy12777        688 EEHARDGT  695 (697)
Q Consensus       688 qGDSGgg~  695 (697)
                      +|||||++
T Consensus       347 ~GDSGGPL  354 (403)
T 1zjk_A          347 RGDSGGAL  354 (403)
T ss_dssp             SCSTTCEE
T ss_pred             cCCCCccE
Confidence            99999987

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=100.00  E-value=2.1e-37  Score=307.52  Aligned_cols=187  Identities=28%  Similarity=0.530  Sum_probs=159.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccC--CCCCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~--~~~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      |+||.++..++|||||+|+      +.++|||+||+++||||||||+.+  .....+.|++|.++.....    .+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~------~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~----~~~~~v   70 (242)
T 3tvj_B            1 IYGGQKAKPGDFPWQVLIL------GGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPH----YTQAWS   70 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEE------SSEEEEEEEETTTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSC----CEEEEE
T ss_pred             CcCCeeCCCCCCCCEEEEe------cCCcEEEEEecCCEEEECHHHCCCCCCCcceEEEEeccccccCcc----cceeeE
Confidence            7899999999999999996      257899999999999999999976  4466789999988775432    377889


Q ss_pred             EEEEECCCCCC-CCCCCceEEEecCcccccCCCeeeeecCCCCC---CCCCCEEEEEeccccCCCCccccCCCCcccccc
Q psy12777        469 QIVASHPQFDP-RTFEYDLALLRFYEPVKFQPNIIPICVPEDDT---NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM  544 (697)
Q Consensus       469 ~~IiiHP~Yn~-~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~---~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s  544 (697)
                      .++++||+|+. ..+.||||||||++|+.|+++|+|||||....   ...+..|+++|||.+..                
T Consensus        71 ~~i~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~----------------  134 (242)
T 3tvj_B           71 EAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQR----------------  134 (242)
T ss_dssp             EEEEECTTCCTTSCSTTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTT----------------
T ss_pred             EEEEeCCCCCCCCCCcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCC----------------
Confidence            99999999997 67889999999999999999999999998764   23689999999998765                


Q ss_pred             cccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccc
Q psy12777        545 ATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCR  624 (697)
Q Consensus       545 ~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~  624 (697)
                                                                                                      
T Consensus       135 --------------------------------------------------------------------------------  134 (242)
T 3tvj_B          135 --------------------------------------------------------------------------------  134 (242)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCC-cccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        625 RRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAG-FIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       625 ~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~-~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                                   +..+..||++.++++++++|+..|.... ....+.++||||+...++.++|+||||||+.
T Consensus       135 -------------~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~  194 (242)
T 3tvj_B          135 -------------GFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALV  194 (242)
T ss_dssp             -------------SSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEE
T ss_pred             -------------CCcCccceEEeeeEEcHHHHHHhhccCCcccccccCCeEEECCCCCCCccccCCCCCeEE
Confidence                         2346789999999999999999885321 1224889999999877889999999999873

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=100.00  E-value=6.2e-38  Score=313.40  Aligned_cols=182  Identities=29%  Similarity=0.520  Sum_probs=156.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||+|+|+.    .+.++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~--~~~~~~v~~   70 (237)
T 1gvz_A            1 IIGGWECEKHSKPWQVAVYH----QGHFQCGGVLVHPQWVLTAAHCMS----DDYQIWLGRHNLSKDED--TAQFHQVSD   70 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCC----SSCEEEESCSBTTSCCT--TCEEECEEE
T ss_pred             CCCCEECCCCCCCeEEEEee----CCceEEEeEEeeCCEEEEcHHhCC----CCCeEEEeecccccCCC--CceEEEeee
Confidence            78999999999999999975    246899999999999999999995    46899999998865443  468899999


Q ss_pred             EEECCCCCCCCC-----------CCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCc
Q psy12777        471 VASHPQFDPRTF-----------EYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPA  539 (697)
Q Consensus       471 IiiHP~Yn~~t~-----------~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~  539 (697)
                      +++||+|+....           .||||||||++|+.|+++++|||||.... ..+..|+++|||.+...          
T Consensus        71 ~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~-~~~~~~~v~GwG~~~~~----------  139 (237)
T 1gvz_A           71 SFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEP-KLGSTCYTSGWGLISTF----------  139 (237)
T ss_dssp             EEECTTSCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSSCC-CTTCEEEEEEEECSCTT----------
T ss_pred             EecCCccCcccccccccccccccCCceEEEEeCCCcccCCcEeeeECCCCCC-CCCCEEEEECCCcccCC----------
Confidence            999999987665           89999999999999999999999998764 36899999999998541          


Q ss_pred             ccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeee
Q psy12777        540 TRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI  619 (697)
Q Consensus       540 ~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~  619 (697)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (237)
T 1gvz_A          140 --------------------------------------------------------------------------------  139 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        620 IQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       620 ~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                       .+..+..||++.++++++++|+..|.     ..+.+.||||+...++.++|+||||||+
T Consensus       140 -----------------~~~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  193 (237)
T 1gvz_A          140 -----------------TNRGSGTLQCVELRLQSNEKCARAYP-----EKMTEFVLCATHRDDSGSICLGDSGGAL  193 (237)
T ss_dssp             -----------------TCSEEEEEEEEEEEEECGGGGCSSCG-----GGCCTTEEEEECSSTTCEECGGGTTCEE
T ss_pred             -----------------CCCCCCccEEEEEeEeChhHhhhhhh-----hcCCCceEEEeeCCCCCccCCCCccCcE
Confidence                             22345789999999999999998764     2578999999976677899999999987

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=100.00  E-value=1.7e-37  Score=306.29  Aligned_cols=185  Identities=22%  Similarity=0.373  Sum_probs=159.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|++....+..++|||+||+++||||||||+.    ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~----~~~~v~~g~~~~~~~~~--~~~~~~v~~   74 (224)
T 3rp2_A            1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKG----REITVILGAHDVRKRES--TQQKIKVEK   74 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCC----SEEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCcEEEEEeEEeeCCEEEEchhcCC----CCcEEEEeccccCcCCC--CcEEEEEEE
Confidence            789999999999999999875444447899999999999999999984    46899999988765443  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+.....||||||||++++.|+++++|||||.....+ .+..|+++|||.+..+                    
T Consensus        75 ~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~--------------------  134 (224)
T 3rp2_A           75 QIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVR--------------------  134 (224)
T ss_dssp             EEECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETT--------------------
T ss_pred             EEECCCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCC--------------------
Confidence            9999999999999999999999999999999999999876543 6899999999998652                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       135 --------------------------------------------------------------------------------  134 (224)
T 3rp2_A          135 --------------------------------------------------------------------------------  134 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              +..+..||++.++++++++|+. +.     ....+.||||+...++.++|+|||||++
T Consensus       135 --------~~~~~~l~~~~~~~~~~~~C~~-~~-----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl  186 (224)
T 3rp2_A          135 --------DPTSYTLREVELRIMDEKACVD-YR-----YYEYKFQVCVGSPTTLRAAFMGDSGGPL  186 (224)
T ss_dssp             --------EEECSBCEEEEEEEECGGGTTT-TT-----CCCTTTEEEECCTTSCCBCCTTTTTCEE
T ss_pred             --------CCCCceeeEeeeeecChHHhcc-cc-----ccCcCCEEEecCCCCCCeeccCCCCCeE
Confidence                    2235689999999999999987 22     1357899999987778899999999987

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=100.00  E-value=1.6e-37  Score=309.87  Aligned_cols=193  Identities=25%  Similarity=0.420  Sum_probs=161.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCc-eeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~-~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      |+||.++..++|||+|+|++....+. .++|||+||+++||||||||+.+. ....+.|++|.+++.....  ..+.+.|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~--~~~~~~v   78 (247)
T 3mhw_U            1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQ--GEMKFEV   78 (247)
T ss_dssp             CBSSEECCGGGSTTEEEEEEECTTSCEEEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCT--TCEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEecCCCccceEEEEEEEeCCEEEEcHHhCcCCCCCccEEEEeccccccCCCC--CCEEEEE
Confidence            78999999999999999987543332 689999999999999999999764 3456899999998876543  4688999


Q ss_pred             EEEEECCCCCCCC--CCCceEEEecCcc----cccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccc
Q psy12777        469 QIVASHPQFDPRT--FEYDLALLRFYEP----VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATR  541 (697)
Q Consensus       469 ~~IiiHP~Yn~~t--~~nDIALLrL~~P----V~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~  541 (697)
                      .++++||+|+...  ..||||||||++|    +.++++++|||||...... .+..|+++|||.+..+            
T Consensus        79 ~~i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~------------  146 (247)
T 3mhw_U           79 ENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENST------------  146 (247)
T ss_dssp             EEEEECTTCEEC-CCEESCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTT------------
T ss_pred             EEEEECCCCCCCcCCCCCcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCC------------
Confidence            9999999998766  5799999999999    7899999999999865433 5899999999998762            


Q ss_pred             ccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeee
Q psy12777        542 QEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQ  621 (697)
Q Consensus       542 ~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~  621 (697)
                                                                                                      
T Consensus       147 --------------------------------------------------------------------------------  146 (247)
T 3mhw_U          147 --------------------------------------------------------------------------------  146 (247)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        622 NCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       622 ~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                     ....+..||++.+++++.++|+..+.+   ...+.++||||+...++.++|+||||||+
T Consensus       147 ---------------~~~~~~~l~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl  202 (247)
T 3mhw_U          147 ---------------DYLYPEQLKMTVVKLISHRECQQPHYY---GSEVTTKMLCAADPQWKTDSCQGDSGGPL  202 (247)
T ss_dssp             ---------------CSSCCSBCEEEEEEEECHHHHTSTTTT---GGGCCTTEEEEECTTSCCBCCTTCTTCEE
T ss_pred             ---------------CcccchhheeeEEEEEChHHhcCcccc---CCcCCCCeEecCCCCCCCccCCCCCCCeE
Confidence                           223578899999999999999976422   24688999999987778899999999987

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=100.00  E-value=1.8e-37  Score=309.91  Aligned_cols=188  Identities=30%  Similarity=0.580  Sum_probs=158.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||+|+|++...+...++|||+||+++||||||||+..  ...+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~~~--~~~~~~v~~   76 (236)
T 1elt_A            1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS--ARTWRVVLGEHNLNTNEG--KEQIMTVNS   76 (236)
T ss_dssp             CBSSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSS--CCCEEEEESCSBTTSCCS--CCEEECEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEecCCceeeEEEEEEEeCCEEEECHHhhCC--cCceEEEEccccCCCCCC--CcEEEEEEE
Confidence            7899999999999999998754333358999999999999999999975  357899999998865443  358899999


Q ss_pred             EEECCCCCCCCC--CCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQFDPRTF--EYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Yn~~t~--~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +++||+|+....  .||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..                   
T Consensus        77 i~~hp~y~~~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~-------------------  137 (236)
T 1elt_A           77 VFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTST-------------------  137 (236)
T ss_dssp             EEECTTCCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSST-------------------
T ss_pred             EEECCCCCCCCCCCCccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCC-------------------
Confidence            999999998776  8999999999999999999999999876433 588999999999865                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (236)
T 1elt_A          138 --------------------------------------------------------------------------------  137 (236)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               .+..+..||++.++++++++|+..+.+   ...+.+.||||+. . +.++|+||||||+
T Consensus       138 ---------~~~~~~~l~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~-~-~~~~C~GDSGgPL  191 (236)
T 1elt_A          138 ---------GGPLSDSLKQAWLPSVDHATCSSSGWW---GSTVKTTMVCAGG-G-ANSGCNGDSGGPL  191 (236)
T ss_dssp             ---------TCCCCSBCEEEECCEECHHHHTSTTTT---GGGSCTTEEEECC-S-SCBCCTTCTTCEE
T ss_pred             ---------CCCcChhheEeEeeecCHHHhcccccc---CCcCCcceEEecC-C-CCccCCCCCCCee
Confidence                     234567899999999999999986432   1357899999993 3 3899999999987

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=100.00  E-value=4.2e-37  Score=307.18  Aligned_cols=181  Identities=22%  Similarity=0.529  Sum_probs=157.0

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|+.    + .++|||+||+++||||||||+.+    .+.|++|.+++....+. ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~-~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~-~~~~~~v~~   70 (231)
T 2aiq_A            1 VIGGDECNINEHRFLALVYA----N-GSLCGGTLINQEWVLTARHCDRG----NMRIYLGMHNLKVLNKD-ALRRFPKEK   70 (231)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----T-TEEEEEEECSSSEEEECGGGCCS----SCEEEESCSCTTSCCTT-CEEECEEEE
T ss_pred             CCCCeECCCCCCCeEEEEEc----C-CCeEEEEEEeCCEEEEcHHcCCC----CCEEEEecccccccCCC-ceEEEEEEE
Confidence            78999999999999999973    2 47899999999999999999964    57899999887643322 357788999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++|+.|+++++|||||..... .+..|+++|||.+...                     
T Consensus        71 ~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~---------------------  128 (231)
T 2aiq_A           71 YFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPPS-VGSVCRIMGWGTITSP---------------------  128 (231)
T ss_dssp             ECCSSCCSSSTTTTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSS---------------------
T ss_pred             EEECCCCCCCCCCCCEEEEEecCCCCCCCcEEeeECCCCCCC-CCCEEEEEeCCccCCC---------------------
Confidence            999999999899999999999999999999999999987653 6899999999998652                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       129 --------------------------------------------------------------------------------  128 (231)
T 2aiq_A          129 --------------------------------------------------------------------------------  128 (231)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            +...+..||++.+++++.++|+..|.      .+.+.||||+...++.++|+|||||++
T Consensus       129 ------~~~~~~~l~~~~~~~~~~~~C~~~~~------~~~~~~~Ca~~~~~~~~~C~GDSGgPL  181 (231)
T 2aiq_A          129 ------NATLPDVPHCANINILDYAVCQAAYK------GLAATTLCAGILEGGKDTCKGDSGGPL  181 (231)
T ss_dssp             ------SCCCCSSCEEEEEEEECHHHHHHHCT------TCCSSEEEEECTTCSCBCCTTCTTCEE
T ss_pred             ------CCccCchhhhccceecchhhhhhhhc------CCCcCcEEeccCCCCCcccCCcCCCcE
Confidence                  23457889999999999999998764      278999999976778899999999987

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=100.00  E-value=5.5e-37  Score=309.24  Aligned_cols=193  Identities=33%  Similarity=0.595  Sum_probs=158.8

Q ss_pred             cCCCcCCC----CCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccC
Q psy12777        380 VCGRRLFP----SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDL  454 (697)
Q Consensus       380 ~CG~~~~~----~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl  454 (697)
                      .||++...    ..||+||.+|..++|||+|+|+..   .+.++|||+||+++||||||||+... ....+.|++|.++.
T Consensus         3 ~cg~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~---~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~   79 (247)
T 1ddj_A            3 DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTR---FGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQE   79 (247)
T ss_dssp             CTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECT---TSCEEEEEEEEETTEEEECGGGGTTCSCGGGCEEEESCSBS
T ss_pred             ccCCCCCCCcccCCCcCCCEECCCCCCCcEEEEEcC---CCCeEEEEEEeeCCEEEEcHHHcCCCCCCccEEEEEccccc
Confidence            58876432    359999999999999999999752   24689999999999999999999763 34578999999876


Q ss_pred             CCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccc
Q psy12777        455 STEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRR  533 (697)
Q Consensus       455 ~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~  533 (697)
                      .....  ..+.+.|.+++.||.      .||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..+    
T Consensus        80 ~~~~~--~~~~~~v~~~~~hp~------~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~----  147 (247)
T 1ddj_A           80 VNLEP--HVQEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGT----  147 (247)
T ss_dssp             SSCCT--TCEEEEEEEEEECTT------SCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSS----
T ss_pred             CccCC--ceEEEEeeeEEcCCC------CCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCC----
Confidence            54332  457889999999996      4799999999999999999999999865433 5899999999988641    


Q ss_pred             cCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccc
Q psy12777        534 SYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW  613 (697)
Q Consensus       534 s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~  613 (697)
                                                                                                      
T Consensus       148 --------------------------------------------------------------------------------  147 (247)
T 1ddj_A          148 --------------------------------------------------------------------------------  147 (247)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCC
Q psy12777        614 SQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARD  693 (697)
Q Consensus       614 ~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGg  693 (697)
                                               ..+..||++.++++++++|++.+.   ....+.+.||||+...++.|+|+|||||
T Consensus       148 -------------------------~~~~~L~~~~~~i~~~~~C~~~~~---~~~~~~~~~~Ca~~~~~~~~~C~GDSGg  199 (247)
T 1ddj_A          148 -------------------------FGAGLLKEAQLPVIENKVCNRYEF---LNGRVQSTELCAGHLAGGTDSCQGDAGG  199 (247)
T ss_dssp             -------------------------TTTTBCEEEEEEEECHHHHTSTTT---TTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred             -------------------------CCCccceEEeeeecCHHHhcchhc---cCCCCcCCeEeecCCCCCCccccCcCcC
Confidence                                     125789999999999999987432   1235789999999767788999999999


Q ss_pred             CC
Q psy12777        694 GT  695 (697)
Q Consensus       694 g~  695 (697)
                      |+
T Consensus       200 PL  201 (247)
T 1ddj_A          200 PL  201 (247)
T ss_dssp             EE
T ss_pred             cE
Confidence            87

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=100.00  E-value=5.1e-37  Score=311.99  Aligned_cols=207  Identities=26%  Similarity=0.467  Sum_probs=167.8

Q ss_pred             cccCCCcCC-CCCCeeCCeeCCCCCcceEEEEEEEecC-CceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccC
Q psy12777        378 KEVCGRRLF-PSSRIVGGEKATFGKWPWQISLRQWIRS-TYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDL  454 (697)
Q Consensus       378 ~~~CG~~~~-~~~RIVGG~~A~~GewPW~VsL~~~~~~-~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl  454 (697)
                      ...||++.. +..||+||.+|..++|||||+|++.... ...|+||||||+++||||||||+.+.. ...+.|++|.+++
T Consensus        10 ~~~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~v~~g~~~~   89 (276)
T 2vnt_A           10 KFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRL   89 (276)
T ss_dssp             CCCTTCCCC-----CCSSEECCGGGSTTEEEEEEECSSSCEEEEEEEEEEETTEEEECGGGTTTCCCGGGEEEEESCCBS
T ss_pred             CCCCCCcCCCCCCcEECCEECCCCCCCcEEEEEEecCCCcceeEEEEEEeeCCEEEECcccccCCCCCccEEEEeeeeec
Confidence            456998753 5679999999999999999999875433 346899999999999999999997643 4567899999888


Q ss_pred             CCCCCCCCcEEEEEEEEEECCCCCCCC--CCCceEEEecCccc----ccCCCeeeeecCCCCCCC-CCCEEEEEeccccC
Q psy12777        455 STEEEPYGYQERRVQIVASHPQFDPRT--FEYDLALLRFYEPV----KFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLY  527 (697)
Q Consensus       455 ~~~~~~~~~q~~~V~~IiiHP~Yn~~t--~~nDIALLrL~~PV----~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~  527 (697)
                      .....  ..+.+.|.++++||+|+...  .++|||||+|+.++    .|+++|+|||||...... .+..|.++|||.+.
T Consensus        90 ~~~~~--~~~~~~v~~i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~  167 (276)
T 2vnt_A           90 NSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKEN  167 (276)
T ss_dssp             SSCCT--TCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSS
T ss_pred             cCCCC--ceEEEEEEEEEEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccc
Confidence            76554  56889999999999998654  46899999998765    588999999999876544 58999999999986


Q ss_pred             CCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecc
Q psy12777        528 EGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH  607 (697)
Q Consensus       528 ~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAH  607 (697)
                      ..                                                                              
T Consensus       168 ~~------------------------------------------------------------------------------  169 (276)
T 2vnt_A          168 ST------------------------------------------------------------------------------  169 (276)
T ss_dssp             TT------------------------------------------------------------------------------
T ss_pred             cC------------------------------------------------------------------------------
Confidence            62                                                                              


Q ss_pred             cccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCC
Q psy12777        608 CVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC  687 (697)
Q Consensus       608 C~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtC  687 (697)
                                                   ....+..||++.++++++++|+..|..   ...+.+.++|++...++.|+|
T Consensus       170 -----------------------------~~~~~~~l~~~~~~i~~~~~C~~~~~~---~~~~~~~~~~~~~~~~~~~~C  217 (276)
T 2vnt_A          170 -----------------------------DYLYPEQLKMTVVKLISHRECQQPHYY---GSEVTTKMLCAADPQWKTDSC  217 (276)
T ss_dssp             -----------------------------CSCCCSBCEEEEEEEECHHHHTSTTTT---GGGSCTTEEEEECTTSCCCCC
T ss_pred             -----------------------------CCCcchhheeeeeeEecHHHhhhhhcc---CcccCccceeeccCCCCCCCC
Confidence                                         234567899999999999999987643   235678899999888889999


Q ss_pred             cccCCCCCC
Q psy12777        688 EEHARDGTD  696 (697)
Q Consensus       688 qGDSGgg~~  696 (697)
                      +|||||++.
T Consensus       218 ~GDSGGPLv  226 (276)
T 2vnt_A          218 QGDSGGPLV  226 (276)
T ss_dssp             TTCTTCEEE
T ss_pred             CCCCCCeEE
Confidence            999999873

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=100.00  E-value=5.1e-38  Score=314.03  Aligned_cols=186  Identities=30%  Similarity=0.582  Sum_probs=152.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-----CCCceEEEEccccCCCCCCCCCcEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-----PPSDLLLRLGEHDLSTEEEPYGYQE  465 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-----~~~~l~V~LG~~dl~~~~~~~~~q~  465 (697)
                      |+||.+|..++|||+|+|..      .++|||+||+++||||||||+...     ....+.|++|.+++....   ..+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~------~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~---~~~~   71 (242)
T 2qy0_B            1 IIGGQKAKMGNFPWQVFTNI------HGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELM---KLGN   71 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEES------SSEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHH---HHCC
T ss_pred             CCCCEECCCCCCCcEEEEcc------CCCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEEeeccccccc---cccc
Confidence            78999999999999999964      357999999999999999999642     245678999987653211   1245


Q ss_pred             EEEEEEEECCCCCCC---CCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccc
Q psy12777        466 RRVQIVASHPQFDPR---TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATR  541 (697)
Q Consensus       466 ~~V~~IiiHP~Yn~~---t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~  541 (697)
                      +.|.++++||+|+..   .+.||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..             
T Consensus        72 ~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~-------------  138 (242)
T 2qy0_B           72 HPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE-------------  138 (242)
T ss_dssp             CCEEEEEECTTCCTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSS-------------
T ss_pred             eeEEEEEECCCCccCcCCCCCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCC-------------
Confidence            679999999999865   678999999999999999999999999765432 589999999998764             


Q ss_pred             ccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeee
Q psy12777        542 QEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQ  621 (697)
Q Consensus       542 ~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~  621 (697)
                                                                                                      
T Consensus       139 --------------------------------------------------------------------------------  138 (242)
T 2qy0_B          139 --------------------------------------------------------------------------------  138 (242)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        622 NCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       622 ~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                     .  .+..||++.++++++++|+..+........+.++||||+...++.++|+|||||++
T Consensus       139 ---------------~--~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl  195 (242)
T 2qy0_B          139 ---------------K--IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVF  195 (242)
T ss_dssp             ---------------S--CCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEE
T ss_pred             ---------------c--CCccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccCCCCCCccccCCCCCcE
Confidence                           1  35789999999999999998775432223578999999976677899999999986

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=100.00  E-value=9.4e-37  Score=303.15  Aligned_cols=189  Identities=24%  Similarity=0.477  Sum_probs=159.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|+...  ...++|||+||+++||||||||+.    ..+.|++|.++....... ......+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~--~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~g~~~~~~~~~~-~~~~~~~~~   73 (238)
T 4e7n_A            1 IIGGDECNINEHRFLVALYTSR--SRTLFCGGTLINQEWVLTAAHCDR----KNFRIKLGMHSKKVPNED-EQTRVPKEK   73 (238)
T ss_dssp             CBSCEECCTTSCTTEEEEECTT--TCCEEEEEEECSSSEEEECGGGCC----SSCEEEESCSCSSSCCTT-CEEECEEEE
T ss_pred             CCCCeeCCCCCcCcEEEEEECC--CCCEEEEEEEecCCEEEEhHHcCC----CCCeEEeceeeccccCCC-ceeEeeeee
Confidence            7899999999999999997521  356899999999999999999985    357899999887654332 334456777


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++|+.|+++++|||||..... .+..|+++|||.+...                     
T Consensus        74 ~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~---------------------  131 (238)
T 4e7n_A           74 FFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSPPS-VGSVCRIMGWGRISPT---------------------  131 (238)
T ss_dssp             ECSSTTCCCCSSSCCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSS---------------------
T ss_pred             EEcCCCCCCCCCCCcEEEEEeCCCccCCCceeeeeCCCCCCC-CCCEEEEEECCCCCCC---------------------
Confidence            778999999999999999999999999999999999987654 5999999999998762                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       132 --------------------------------------------------------------------------------  131 (238)
T 4e7n_A          132 --------------------------------------------------------------------------------  131 (238)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                            .+..+..||++.++++++++|+..|...  ...+.+.||||+...++.++|+|||||++.
T Consensus       132 ------~~~~~~~l~~~~~~~~~~~~C~~~~~~~--~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~  189 (238)
T 4e7n_A          132 ------EGTYPDVPHCVNINLLEYEMCRAPYPEF--ELPATSRTLCAGILEGGKDTCKGDSGGPLI  189 (238)
T ss_dssp             ------SCCCCSSCEEEEEEEECGGGGTTTCGGG--CCCSCCSEEEEECTTCSCBCCTTCTTCEEE
T ss_pred             ------CCCCCccceEeeccccCHHHHhhhcccc--cCCCCCCeEEeCCCCCCCccCCCCCCcceE
Confidence                  2345789999999999999999887532  235789999999878889999999999873

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=100.00  E-value=1.2e-36  Score=301.86  Aligned_cols=178  Identities=26%  Similarity=0.442  Sum_probs=152.9

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|+.    ...++|||+||+++||||||||+.+.....+.|++|.+++...... ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~-~~~~~~v~~   75 (225)
T 1a7s_A            1 IVGGRKARPRQFPFLASIQN----QGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQ-SRQTFSISS   75 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTT-TCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEec----CCCcEEEEEEeeCCEEEEchhccCCCCCCceEEEEeeeECCCCCCc-ceeEEeEEE
Confidence            78999999999999999986    2578999999999999999999987666789999999987654331 237899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++.| +|+.....||||||||++++.|+++++|||||.....+ .+..|+++|||.+..                     
T Consensus        76 i~~h-~y~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~---------------------  133 (225)
T 1a7s_A           76 MSEN-GYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRS---------------------  133 (225)
T ss_dssp             EECS-SCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSST---------------------
T ss_pred             Eecc-cccCCCCcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCC---------------------
Confidence            9999 99988899999999999999999999999999876543 689999999999876                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (225)
T 1a7s_A          134 --------------------------------------------------------------------------------  133 (225)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..||++.+++++.++|+.             +||||+...++.++|+|||||++
T Consensus       134 -------~~~~~~~l~~~~~~~~~~~~C~~-------------~~~Ca~~~~~~~~~C~GDSGgPl  179 (225)
T 1a7s_A          134 -------GGRLSRFPRFVNVTVTPEDQCRP-------------NNVCTGVLTRRGGICNGDGGTPL  179 (225)
T ss_dssp             -------TCCCCSSCEEEEEEECCGGGSCT-------------TEEEEECSSSSCBCCTTCTTCEE
T ss_pred             -------CCCcccccceeeeEECCHHHhcc-------------CceEEeccCCCCCcccCCCcchh
Confidence                   23457889999999999999974             69999987777899999999987

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=100.00  E-value=3.6e-37  Score=324.48  Aligned_cols=200  Identities=30%  Similarity=0.562  Sum_probs=154.1

Q ss_pred             cCCCccccCCCcCCC---CCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEE
Q psy12777        373 NMSNYKEVCGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL  449 (697)
Q Consensus       373 ~~s~~~~~CG~~~~~---~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~L  449 (697)
                      +...+...||....+   ..||+||.+|..++|||||+|..       ++|||+||+++||||||||+....  ...|++
T Consensus        62 ~~~~c~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~-------~~CgGsLIs~~~VLTAAHC~~~~~--~~~v~~  132 (333)
T 1elv_A           62 ELPKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDN-------PWAGGALINEYWVLTAAHVVEGNR--EPTMYV  132 (333)
T ss_dssp             SCCCEEECCSCCSSCC-----CBTCEECCGGGSTTEEEEET-------TEEEEEEEETTEEEECHHHHTTCS--SCCEEC
T ss_pred             ccccccCCcCCCCCcccccceeecCcccCCCCcCeEEEecC-------CceeEEEecCCEEEehhheeCCCC--CCeEEE
Confidence            344556689987542   47999999999999999999931       379999999999999999997532  347899


Q ss_pred             ccccCCCCCCCCCcEEEEE---EEEEECCCCCC-------CCCCCceEEEecCcccccCCCeeeeecCCCCCC---CCCC
Q psy12777        450 GEHDLSTEEEPYGYQERRV---QIVASHPQFDP-------RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN---FVGT  516 (697)
Q Consensus       450 G~~dl~~~~~~~~~q~~~V---~~IiiHP~Yn~-------~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~---~~G~  516 (697)
                      |.+++...    ..+.+.|   .++++||+|+.       ..+.||||||||++|+.|+++|+|||||.....   ..+.
T Consensus       133 G~~~~~~~----~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~  208 (333)
T 1elv_A          133 GSTSVQTS----RLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGD  208 (333)
T ss_dssp             SCSBCC-----------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTC
T ss_pred             eeeecccC----ccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCc
Confidence            99877322    2244455   99999999984       568899999999999999999999999976532   2589


Q ss_pred             EEEEEeccccCCCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeE
Q psy12777        517 SAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAAL  596 (697)
Q Consensus       517 ~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGsl  596 (697)
                      .|+++|||.+..+                                                                   
T Consensus       209 ~~~v~GWG~t~~~-------------------------------------------------------------------  221 (333)
T 1elv_A          209 LGLISGWGRTEKR-------------------------------------------------------------------  221 (333)
T ss_dssp             EEEEEESCCCSSC-------------------------------------------------------------------
T ss_pred             EEEEEECcCcCCC-------------------------------------------------------------------
Confidence            9999999998651                                                                   


Q ss_pred             eeCcEEEeecccccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCC----cccCcCC
Q psy12777        597 FNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAG----FIEHIPE  672 (697)
Q Consensus       597 I~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~----~~~~i~~  672 (697)
                                                                ..+..||++.|+++++++|+..+....    ....+.+
T Consensus       222 ------------------------------------------~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~  259 (333)
T 1elv_A          222 ------------------------------------------DRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTP  259 (333)
T ss_dssp             ------------------------------------------SSCSBCEEEEEEEECHHHHHTC----------CCCCCT
T ss_pred             ------------------------------------------CcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCC
Confidence                                                      236789999999999999998764210    0125789


Q ss_pred             CeEEEeeCCCCCCCCcccCCCCC
Q psy12777        673 IFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       673 ~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                      +||||+... +.|+|+|||||++
T Consensus       260 ~~~Cag~~~-~~~~C~GDSGGPL  281 (333)
T 1elv_A          260 NMICAGGEK-GMDSCKGDSGGAF  281 (333)
T ss_dssp             TEEEEECST-TCBCCTTCTTCEE
T ss_pred             CeECccCCC-CCCcCcCcCCCce
Confidence            999999654 7899999999986

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=100.00  E-value=2.3e-36  Score=299.69  Aligned_cols=184  Identities=21%  Similarity=0.441  Sum_probs=156.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|+.    ...++|||+||+++||||||||+.    ..+.|++|.++....... ......+..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~g~~~~~~~~~~-~~~~~~~~~   71 (234)
T 3s69_A            1 VIGGDECNINEHRSLVAFFN----STGFFCSGTLINEEWVLTAAHCDN----TNFQMKLGVHSKKVLNED-EQTRNPKEK   71 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEC----SSCEEEEEEEEETTEEEECGGGCC----SSCEEEESCCCSSSCCTT-CEEECEEEE
T ss_pred             CCCCccCCCCCCceEEEEee----CCCeEEeEEEeeCCEEEEchhhCC----CCceEEecccccccccCC-cceeeceEE
Confidence            78999999999999999975    346899999999999999999985    457899998877654332 233445666


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++++.|+++++|||||..... .+..|+++|||.+...                     
T Consensus        72 ~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~---------------------  129 (234)
T 3s69_A           72 FICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPSSPPS-VGSVCHIMGWGSITPI---------------------  129 (234)
T ss_dssp             EECTTCCTTCTTSSCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSS---------------------
T ss_pred             EECCCccCCCCCcccEEEEeeCCcCCCCCcceeeecCCCCCC-CCCEEEEEECCCCCCC---------------------
Confidence            777999999999999999999999999999999999987654 5999999999998762                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       130 --------------------------------------------------------------------------------  129 (234)
T 3s69_A          130 --------------------------------------------------------------------------------  129 (234)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            ....+..|+++.+++++++.|+..|..    ..+.+.||||+...++.++|+|||||++
T Consensus       130 ------~~~~~~~l~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  184 (234)
T 3s69_A          130 ------KVTYPDVPYCAYINLLDDAVCQAGYPE----LLTEYRTLCAGILEGGKDTCGGDSGGPL  184 (234)
T ss_dssp             ------SCCCCSSCEEEEEEEECHHHHHHHCTT----CCTTSCEEEEECTTCSCBCCTTCTTCEE
T ss_pred             ------CcCcccccceeEEeecCHHHHhhhccc----ccCCcceEeccCCCCCCccCCCCCccce
Confidence                  234578899999999999999998742    2577899999987888999999999987

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=100.00  E-value=9.7e-38  Score=335.29  Aligned_cols=200  Identities=30%  Similarity=0.576  Sum_probs=153.1

Q ss_pred             ccccCCCcCC---CCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-----CCceEEE
Q psy12777        377 YKEVCGRRLF---PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-----PSDLLLR  448 (697)
Q Consensus       377 ~~~~CG~~~~---~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-----~~~l~V~  448 (697)
                      +...||++..   ...||+||.+|..++|||||+|..      .++|||+||+++||||||||+....     ...+.|+
T Consensus       141 C~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~------~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~  214 (399)
T 1gpz_A          141 CLPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNI------HGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVF  214 (399)
T ss_dssp             EEECCSCCSSCCCSSCCCCSCEECCTTSSTTEEEEES------SSEEEEEEETTTEEEECGGGTSCTTC-----CCCEEE
T ss_pred             ccCCCCCcCCcccCCCEEECCEECCCCCCCCEEEECC------CCCeEEEEeCCCEEEeChhcccccccccCCcceEEEE
Confidence            3457998643   247999999999999999999853      2479999999999999999997532     3457899


Q ss_pred             EccccCCCCCCCCCcEEEEEEEEEECCCCCCC---CCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEecc
Q psy12777        449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPR---TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWG  524 (697)
Q Consensus       449 LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~---t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG  524 (697)
                      +|.+++.....   .+.+.|.++++||+|+..   .+.||||||||++|+.|+++|+|||||.....+ .+..|+|+|||
T Consensus       215 ~G~~~~~~~~~---~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG  291 (399)
T 1gpz_A          215 LGHTNVEELMK---LGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG  291 (399)
T ss_dssp             ESCSBHHHHHH---TCCCCEEEEEECSSCCSSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC
T ss_pred             ecccccccccc---ccccceEEEEECCCCCcCCCCCCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccC
Confidence            99877543111   234679999999999753   578999999999999999999999999876433 58899999999


Q ss_pred             ccCCCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEe
Q psy12777        525 RLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVT  604 (697)
Q Consensus       525 ~t~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLS  604 (697)
                      .+..                                                                            
T Consensus       292 ~~~~----------------------------------------------------------------------------  295 (399)
T 1gpz_A          292 VMEE----------------------------------------------------------------------------  295 (399)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCC----------------------------------------------------------------------------
Confidence            8754                                                                            


Q ss_pred             ecccccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCC
Q psy12777        605 AAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSF  684 (697)
Q Consensus       605 AAHC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~  684 (697)
                                                        ..+..||++.|+++++++|++.|........+.++|||||...++.
T Consensus       296 ----------------------------------~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~  341 (399)
T 1gpz_A          296 ----------------------------------KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQ  341 (399)
T ss_dssp             -----------------------------------CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECGGGGG
T ss_pred             ----------------------------------ccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccCCCCC
Confidence                                              1356899999999999999987643222235789999999766678


Q ss_pred             CCCcccCCCCC
Q psy12777        685 DSCEEHARDGT  695 (697)
Q Consensus       685 dtCqGDSGgg~  695 (697)
                      |+|+|||||++
T Consensus       342 d~C~GDSGGPl  352 (399)
T 1gpz_A          342 DACQGDSGGVF  352 (399)
T ss_dssp             GGGCSCSSCEE
T ss_pred             ccCCCCCchHe
Confidence            99999999987

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=100.00  E-value=1.1e-36  Score=301.28  Aligned_cols=176  Identities=31%  Similarity=0.510  Sum_probs=153.9

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|++    ...++|||+||+++||||||||+.+.....+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~--~~~~~~v~~   74 (218)
T 2z7f_E            1 IVGGRRARPHAWPFMVSLQL----RGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREP--TRQVFAVQR   74 (218)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCccCcEEEEEe----CCCcEEEEEEccCCEEEEcHHhcCCCCcCcEEEEEeceecCCCCC--ceEEEEEEE
Confidence            78999999999999999986    246899999999999999999998766667999999998765443  458899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++.| +|+.....||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..                     
T Consensus        75 i~~h-~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~---------------------  132 (218)
T 2z7f_E           75 IFEN-GYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGR---------------------  132 (218)
T ss_dssp             EEES-CCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSS---------------------
T ss_pred             EEcc-CCCCCCCCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCC---------------------
Confidence            9999 99988899999999999999999999999999876543 689999999999876                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       133 --------------------------------------------------------------------------------  132 (218)
T 2z7f_E          133 --------------------------------------------------------------------------------  132 (218)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..||++.++++ .+.|+.             .||||+...++.++|+||||||+
T Consensus       133 -------~~~~~~~l~~~~~~~~-~~~C~~-------------~~~Ca~~~~~~~~~C~GDSGgPl  177 (218)
T 2z7f_E          133 -------NRGIASVLQELNVTVV-TSLCRR-------------SNVCTLVRGRQAGVCFGDSGSPL  177 (218)
T ss_dssp             -------SCCBCSBCEEEEEEEE-CTTCCT-------------TSEEEECTTSCCBCCTTCTTCEE
T ss_pred             -------CCCccchheEeeeEEe-hhHcCc-------------ceeeeccCCCCCeeCCCcCCCce
Confidence                   2334678999999999 889974             18999976667899999999987

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=100.00  E-value=1.7e-36  Score=301.04  Aligned_cols=184  Identities=24%  Similarity=0.515  Sum_probs=156.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|+..  ....++|||+||+++||||||||+.    ..+.|++|.++....... ......+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~--~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~g~~~~~~~~~~-~~~~~~~~~   73 (234)
T 3s9c_A            1 VVGGDECNINEHPFLVALYTS--ASSTIHCAGALINREWVLTAAHCDR----RNIRIKLGMHSKNIRNED-EQIRVPRGK   73 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEET--TEEEEEEEEEEEETTEEEECGGGCC----TTEEEEESCSSSSSCCTT-CEEECEEEE
T ss_pred             CCCCeeCCCCCCCeEEEEEEC--CCCcEEEeeEEeeCCEEEEchhhcC----CCceEEEeecccccccCC-cceEEeeeE
Confidence            789999999999999999752  1246889999999999999999985    468999999887654432 234455667


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+...+.||||||||++++.|+++++|||||..... .+..|+++|||.+..                      
T Consensus        74 ~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~L~~~~~~-~~~~~~v~GwG~~~~----------------------  130 (234)
T 3s9c_A           74 YFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRG-VGSRCRIMGWGKIST----------------------  130 (234)
T ss_dssp             ECCSSCSSTTCGGGCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCSBT----------------------
T ss_pred             EEeCCCCCCCCCcCceEEEEECCccccCCcccccccCCCCCC-CCCeEEEEeeCCCCC----------------------
Confidence            777999999889999999999999999999999999987654 599999999999865                      


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (234)
T 3s9c_A          131 --------------------------------------------------------------------------------  130 (234)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             ...+..||++.+++++.++|+..|..    ..+.++||||+...++.++|+|||||++
T Consensus       131 -------~~~~~~l~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDSGgPl  184 (234)
T 3s9c_A          131 -------TTYPDVPHCTNIFIVKHKWCEPLYPW----VPADSRTLCAGILKGGRDTCHGDSGGPL  184 (234)
T ss_dssp             -------TBCCSSCEEEEEEEECGGGTTTTCTT----SCTTSSEEEEECTTSSCBCCTTCTTCEE
T ss_pred             -------CCCCccccccceEecCHHHhhhcccC----CCCCcceEEeecCCCCCccCCCCCCCeE
Confidence                   13467899999999999999988742    3578999999987888999999999987

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=100.00  E-value=4.1e-37  Score=308.00  Aligned_cols=188  Identities=26%  Similarity=0.491  Sum_probs=147.3

Q ss_pred             CCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEE
Q psy12777        393 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVA  472 (697)
Q Consensus       393 GG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~Ii  472 (697)
                      ||.+|..++|||+|+|++...+...++|||+||+++||||||||+..  ...+.|++|.+++.........+.+.|.+++
T Consensus         1 gG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAhC~~~--~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~   78 (240)
T 1fon_A            1 NGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST--SRTYQVVLGEYDRSVLEGSEQVIPINAGDLF   78 (240)
T ss_dssp             --------CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCT--TSCEEEEEEEEETTEEEEEEEEEEECTTSEE
T ss_pred             CCccCCcCCcccEEEEEEecCCcEeeEEEEEEeeCCEEEECHHHCCC--CCceEEEeeeeeccccCCCceeEeeeeeEEE
Confidence            78999999999999998743333368999999999999999999975  3578999999887543221012667788999


Q ss_pred             ECCCCCCCCCC--CceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        473 SHPQFDPRTFE--YDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       473 iHP~Yn~~t~~--nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +||+|+.....  ||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..                     
T Consensus        79 ~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~---------------------  137 (240)
T 1fon_A           79 VHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYT---------------------  137 (240)
T ss_dssp             ECTTCCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCC---------------------
T ss_pred             ECCCCcCCCccCCCCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCC---------------------
Confidence            99999987777  999999999999999999999999876433 588999999999865                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (240)
T 1fon_A          138 --------------------------------------------------------------------------------  137 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..||++.+++++.++|++.+.+   ...+.+.||||+. .+ .++|+||||||+
T Consensus       138 -------~~~~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~-~~-~~~C~GDsGgPL  191 (240)
T 1fon_A          138 -------GGPLPDKLQQALLPTVDYEHCSQWDWW---GITVKKTMVCAGG-DT-RSGCNGDSGGPL  191 (240)
T ss_dssp             -------SSSCCSBCEEEECCEECHHHHTSTTTT---GGGCCTTEEEECC-SS-SCSTTSCTTCEE
T ss_pred             -------CCCCChhheEEEEeeeCHHHhccceec---CCccccceEeecC-CC-CcccCCCCCCeE
Confidence                   234567899999999999999986432   1357899999994 34 899999999987

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=100.00  E-value=2.5e-36  Score=300.50  Aligned_cols=181  Identities=29%  Similarity=0.490  Sum_probs=155.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||+|+|+........++|||+||+++||||||||+.+  ...+.|++|.++...     ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~--~~~~~v~~G~~~~~~-----~~~~~~v~~   73 (230)
T 2hlc_A            1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD--AVSVVVYLGSAVQYE-----GEAVVNSER   73 (230)
T ss_dssp             CBTCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTT--EEEEEEEESCSBTTC-----CSEEEECSE
T ss_pred             CCCCeECCCCCCCcEEEEEEEecCCCCEEEEEEEeeCCEEEECHHHCCC--CcceEEEEeeeecCC-----CCeEEEEEE
Confidence            7899999999999999998754445678999999999999999999975  456889999887654     237889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC---CCCCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT---NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~---~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +++||+|+...+.||||||||+ ++.|+++|+|||||....   ...+..|+++|||.+..+                  
T Consensus        74 i~~hp~y~~~~~~~DiALl~L~-~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~------------------  134 (230)
T 2hlc_A           74 IISHSMFNPDTYLNDVALIKIP-HVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTD------------------  134 (230)
T ss_dssp             EEECTTCBTTTTBTCCEEEECS-CCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSC------------------
T ss_pred             EEECCCCCCCCccccEEEEEec-CCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCC------------------
Confidence            9999999998999999999999 999999999999998653   236899999999987651                  


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       135 --------------------------------------------------------------------------------  134 (230)
T 2hlc_A          135 --------------------------------------------------------------------------------  134 (230)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                .   ..||++.++++++++|++.|..    ..+.+.||||+. .++.++|+||||||+
T Consensus       135 ----------~---~~l~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~-~~~~~~C~GDSGgPl  184 (230)
T 2hlc_A          135 ----------T---VILQYTYNLVIDNDRCAQEYPP----GIIVESTICGDT-SDGKSPCFGDSGGPF  184 (230)
T ss_dssp             ----------C---CBCEEEEEEEECHHHHHTTSCT----TSSCTTEEEECC-TTSCBCCTTCTTCEE
T ss_pred             ----------C---ceeEEEEEEEeCHHHhhhhhCC----CcccCCeEEecC-CCCCCcCCCCCCCee
Confidence                      1   5799999999999999987632    247899999985 456899999999987

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.6e-37  Score=334.67  Aligned_cols=198  Identities=33%  Similarity=0.657  Sum_probs=158.8

Q ss_pred             CCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeeccccc------CCCCCceEEEEccccCCCCCCCC
Q psy12777        388 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE------DVPPSDLLLRLGEHDLSTEEEPY  461 (697)
Q Consensus       388 ~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~------~~~~~~l~V~LG~~dl~~~~~~~  461 (697)
                      ..||+||.+|..++|||||+|+..  ....|+|||+||+++||||||||+.      ......+.|++|.+++...... 
T Consensus       163 ~~RIvgG~~a~~g~~Pw~v~l~~~--~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~-  239 (424)
T 3nxp_A          163 DGRIVEGSDAEIGMSPWQVMLFRK--SPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERN-  239 (424)
T ss_dssp             SSCCCCCEECCTTSCTTEEEEEET--TTTEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTT-
T ss_pred             CCeeECCEECCCCCCCCEEEEeec--CCCCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCC-
Confidence            469999999999999999999752  2347899999999999999999985      2345678999999987654322 


Q ss_pred             CcEEEEEEEEEECCCCC-CCCCCCceEEEecCcccccCCCeeeeecCCCCCC----CCCCEEEEEeccccCCCCccccCC
Q psy12777        462 GYQERRVQIVASHPQFD-PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN----FVGTSAHVTGWGRLYEGRFRRSYG  536 (697)
Q Consensus       462 ~~q~~~V~~IiiHP~Yn-~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~----~~G~~c~VtGWG~t~~g~~~~s~~  536 (697)
                      ..+.+.|.++++||+|+ ...+.||||||||++|+.|+++|+|||||.....    ..+..|+|+|||.+...       
T Consensus       240 ~~~~~~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~-------  312 (424)
T 3nxp_A          240 IEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET-------  312 (424)
T ss_dssp             TCEEECEEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHH-------
T ss_pred             ceeEEEEEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCcc-------
Confidence            35677899999999998 4578899999999999999999999999976431    25899999999987541       


Q ss_pred             CCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccce
Q psy12777        537 HPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQI  616 (697)
Q Consensus       537 ~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~  616 (697)
                                                                                                      
T Consensus       313 --------------------------------------------------------------------------------  312 (424)
T 3nxp_A          313 --------------------------------------------------------------------------------  312 (424)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCC---CCCCCCcccCCC
Q psy12777        617 IPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRK---GSFDSCEEHARD  693 (697)
Q Consensus       617 i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~---g~~dtCqGDSGg  693 (697)
                                    |.. ......+..||++.|++++++.|+..+.     ..+.++|||||+..   ++.|+|+|||||
T Consensus       313 --------------~~~-~~~~~~~~~L~~~~v~ii~~~~C~~~~~-----~~i~~~~iCAg~~~~~~~~~d~C~GDSGG  372 (424)
T 3nxp_A          313 --------------WTA-NVGKGQPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACEGDSGG  372 (424)
T ss_dssp             --------------HHH-C----CCSBCEEEEEEBCCHHHHHHTCS-----SCCCTTEEEESCCCBTTBCCCTTCSCTTC
T ss_pred             --------------Ccc-ccCCCCCccceEEEeeEEcHHHhhhhcc-----CcCCCCeEecccCCCCCCCCccCCCcCCC
Confidence                          000 0012236789999999999999998763     35889999998643   246999999999


Q ss_pred             CC
Q psy12777        694 GT  695 (697)
Q Consensus       694 g~  695 (697)
                      +|
T Consensus       373 PL  374 (424)
T 3nxp_A          373 PF  374 (424)
T ss_dssp             EE
T ss_pred             ce
Confidence            87

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=100.00  E-value=3e-36  Score=302.06  Aligned_cols=196  Identities=33%  Similarity=0.612  Sum_probs=156.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccC------CCCCceEEEEccccCCCCCCCCCcE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED------VPPSDLLLRLGEHDLSTEEEPYGYQ  464 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~------~~~~~l~V~LG~~dl~~~~~~~~~q  464 (697)
                      |+||.+|..++|||+|+|+...  ...++|||+||+++||||||||+..      .....+.|++|.+++...... ..+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~--~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~-~~~   77 (259)
T 3rm2_H            1 IVEGSDAEIGMSPWQVMLFRKS--PQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERN-IEK   77 (259)
T ss_dssp             CBSCEECCTTSSTTEEEEEEET--TEEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTT-TCE
T ss_pred             CCCCEECCCCCcCCEEEEEECC--CCceEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccC-cce
Confidence            7899999999999999997532  3468999999999999999999952      245678999999987654332 345


Q ss_pred             EEEEEEEEECCCCC-CCCCCCceEEEecCcccccCCCeeeeecCCCCCC----CCCCEEEEEeccccCCCCccccCCCCc
Q psy12777        465 ERRVQIVASHPQFD-PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN----FVGTSAHVTGWGRLYEGRFRRSYGHPA  539 (697)
Q Consensus       465 ~~~V~~IiiHP~Yn-~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~----~~G~~c~VtGWG~t~~g~~~~s~~~p~  539 (697)
                      .+.|.++++||+|+ ...+.||||||||++|+.|+++|+|||||.....    ..+..|+++|||.+....         
T Consensus        78 ~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~---------  148 (259)
T 3rm2_H           78 ISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETW---------  148 (259)
T ss_dssp             EEEEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC----------
T ss_pred             eeEEEEEEECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcC---------
Confidence            66799999999998 5678899999999999999999999999976431    258999999999987620         


Q ss_pred             ccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeee
Q psy12777        540 TRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI  619 (697)
Q Consensus       540 ~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~  619 (697)
                                                                                                      
T Consensus       149 --------------------------------------------------------------------------------  148 (259)
T 3rm2_H          149 --------------------------------------------------------------------------------  148 (259)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCC---CCCCCCcccCCCCCC
Q psy12777        620 IQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRK---GSFDSCEEHARDGTD  696 (697)
Q Consensus       620 ~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~---g~~dtCqGDSGgg~~  696 (697)
                                  . .......+..||++.+++++++.|+..+.     ..+.++||||+...   .+.++|+|||||++.
T Consensus       149 ------------~-~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~  210 (259)
T 3rm2_H          149 ------------T-ANVGKGQPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACEGDSGGPFV  210 (259)
T ss_dssp             -------------------CCCSBCEEEEEEBCCHHHHHHTCS-----SCCCTTEEEECCCGGGSCCCBCCTTCTTCEEE
T ss_pred             ------------C-ccccccccccceEEEEEEeCHHHhhhhhc-----ccCCCceEeeeccCCCCCCCcccCCCCCCeeE
Confidence                        0 00012336789999999999999998763     35789999998642   235999999999873

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=100.00  E-value=1.2e-35  Score=297.96  Aligned_cols=182  Identities=26%  Similarity=0.381  Sum_probs=152.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++.. +|||+|+|++.    +.++|||+||+++||||||||+.......+.|++|.+++....+....+.+.|.+
T Consensus         1 IvgG~~a~~-~~Pw~v~l~~~----~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~   75 (240)
T 1si5_H            1 VVNGIPTRT-NIGWMVSLRYR----NKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQ   75 (240)
T ss_dssp             CBSCEECSS-CCTTEEEEEES----SSEEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEE
T ss_pred             CCCCeeCCC-CCCeEEEEEeC----CCeEEEEEEeeCCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEE
Confidence            789999999 99999999863    4689999999999999999999876667899999999887643333568899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++.||+      .||||||||++++.|+++|+|||||.....+ .+..|+++|||.+..+                    
T Consensus        76 ~~~~p~------~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~--------------------  129 (240)
T 1si5_H           76 LVYGPE------GSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLI--------------------  129 (240)
T ss_dssp             EEECSS------TTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCS--------------------
T ss_pred             EEcCCC------CCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCC--------------------
Confidence            999986      6899999999999999999999999865433 5899999999998651                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       130 --------------------------------------------------------------------------------  129 (240)
T 1si5_H          130 --------------------------------------------------------------------------------  129 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               ..+..||++.++++++++|+..|..   ...+.+.||||+...++.++|+||||||+
T Consensus       130 ---------~~~~~L~~~~~~~~~~~~C~~~~~~---~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  183 (240)
T 1si5_H          130 ---------NYDGLLRVAHLYIMGNEKCSQHHRG---KVTLNESEICAGAEKIGSGPCEGDYGGPL  183 (240)
T ss_dssp             ---------SCCCBCEEEEEEEECGGGTCC----------CCTTEEEEECSSSCCBCCTTCTTCEE
T ss_pred             ---------CCCCeeEEEEEeecCHHHhhhhhcC---CccCCCCEEeecCCCCCCEeccCCCCCcE
Confidence                     1357899999999999999987631   12378999999977778899999999987

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=100.00  E-value=7.4e-36  Score=294.97  Aligned_cols=179  Identities=28%  Similarity=0.473  Sum_probs=154.1

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|++... +..++|||+||+++||||||||+.+.....+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~-~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~--~~~~~~v~~   77 (221)
T 1fuj_A            1 IVGGHEAQPHSRPYMASLQMRGN-PGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEP--TQQHFSVAQ   77 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTB-TTCCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEEecC-CCCEEEEEEEecCCEEEEchHhcCcCCCCceEEEEeeeeccCCCC--ceEEEEEEE
Confidence            78999999999999999986322 236899999999999999999998765567999999988765433  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++| +|+.....||||||||++|+.|+++++|||||.....+ .+..|+++|||.+..                     
T Consensus        78 i~~h-~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~---------------------  135 (221)
T 1fuj_A           78 VFLN-NYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGA---------------------  135 (221)
T ss_dssp             EEEC-CCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCS---------------------
T ss_pred             EEeC-CCCCCCCcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCC---------------------
Confidence            9999 99988899999999999999999999999999876533 689999999999865                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       136 --------------------------------------------------------------------------------  135 (221)
T 1fuj_A          136 --------------------------------------------------------------------------------  135 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..||++.++++ .+.|+.             .||||+...++.++|+||||||+
T Consensus       136 -------~~~~~~~l~~~~~~~~-~~~C~~-------------~~~Ca~~~~~~~~~C~GDSGgPL  180 (221)
T 1fuj_A          136 -------HDPPAQVLQELNVTVV-TFFCRP-------------HNICTFVPRRKAGICFGDSGGPL  180 (221)
T ss_dssp             -------SSCBCSBCEEEEEEEE-CTTCCT-------------TEEEEECSSSSCBCCTTCTTCEE
T ss_pred             -------CCCHHHHhhcccceEE-eeecCC-------------ceeeeccCCCCCCCCCCCCCCee
Confidence                   2334678999999999 888863             29999987778899999999987

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=296.28  Aligned_cols=179  Identities=26%  Similarity=0.451  Sum_probs=150.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC--CCCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV--PPSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~--~~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      |+||.   +++|||||+|+..   ...++|||+||+++||||||||+...  ....+.|++|.+++....+....+.+.|
T Consensus         1 IvgG~---~~~~Pw~v~l~~~---~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v   74 (234)
T 2asu_B            1 VVGGH---PGNSPWTVSLRNR---QGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPV   74 (234)
T ss_dssp             CBSCE---ECCCTTEEEEECT---TSCEEEEEEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEE
T ss_pred             CCCcc---cCCCcceEEeecc---CCCEEEEEEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEE
Confidence            78998   5889999999752   24689999999999999999999653  3567899999988765422235688999


Q ss_pred             EEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        469 QIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       469 ~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      .++++||.      .+|||||||++|+.|+++|+|||||.....+ .+..|+++|||.+..+                  
T Consensus        75 ~~i~~hp~------~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~------------------  130 (234)
T 2asu_B           75 AKMVCGPS------GSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGT------------------  130 (234)
T ss_dssp             EEEEECST------TCCEEEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTS------------------
T ss_pred             EEEecCCC------CCCeEEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCC------------------
Confidence            99999997      4799999999999999999999999865433 5899999999998652                  


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (234)
T 2asu_B          131 --------------------------------------------------------------------------------  130 (234)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                 ..+..||++.|+++++++|+..|.     ..+.+.||||+...++.++|+||||||+
T Consensus       131 -----------~~~~~L~~~~~~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~~~~~~C~GDSGgPL  182 (234)
T 2asu_B          131 -----------GNDTVLNVALLNVISNQECNIKHR-----GRVRESEMCTEGLLAPVGACEGDYGGPL  182 (234)
T ss_dssp             -----------SCTTBCEEEEEEEECHHHHHHHTT-----TCCCTTEEEECCCSSCCBCCTTCTTCEE
T ss_pred             -----------CCCccceEEEeeEEcHHHcccccC-----CccCcceEeecCCCCCCeeccCCCCCce
Confidence                       125789999999999999998763     2578999999977778899999999987

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=100.00  E-value=9.8e-36  Score=294.02  Aligned_cols=185  Identities=25%  Similarity=0.421  Sum_probs=157.0

Q ss_pred             eCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEE
Q psy12777        392 VGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIV  471 (697)
Q Consensus       392 VGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~I  471 (697)
                      .||.++..++|||+|+|+.... ...++|||+||+++||||||||+.+.....+.|++|.+++....   ..+.+.|.++
T Consensus         1 ~gG~~a~~~~~Pw~v~l~~~~~-~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~---~~~~~~v~~i   76 (228)
T 3h7o_A            1 KGGEKTDIKQVPWTVAVRTYPG-EESLTCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTNLWEDP---GKSDPYVSHV   76 (228)
T ss_dssp             CCCEECCGGGSTTEEEEEECGG-GCCEEEEEEESSSSEEEECHHHHTTSCGGGCEEEESCSBTTTBC---CEEECCEEEE
T ss_pred             CCCccCCcCCCCeEEEEeecCC-CCceEeeeEEeeCCEEEEcHHhcccCCCCcEEEEecccccccCC---CceeeeEEEE
Confidence            3899999999999999986321 12448999999999999999999876677899999998876533   3478889999


Q ss_pred             EECCCCCCCCCCCceEEEecCcccccCC-CeeeeecCCCCCC-CCCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        472 ASHPQFDPRTFEYDLALLRFYEPVKFQP-NIIPICVPEDDTN-FVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       472 iiHP~Yn~~t~~nDIALLrL~~PV~fs~-~V~PICLP~~~~~-~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++| +|+...+.||||||||++|+.|++ .++|||||..... ..+..|+++|||.+..+                    
T Consensus        77 ~~h-~y~~~~~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~--------------------  135 (228)
T 3h7o_A           77 YLS-FYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTM--------------------  135 (228)
T ss_dssp             EES-SCBTTTTBTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCS--------------------
T ss_pred             Ecc-ccCCCCccCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCC--------------------
Confidence            999 999999999999999999999999 9999999987643 36999999999998762                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       136 --------------------------------------------------------------------------------  135 (228)
T 3h7o_A          136 --------------------------------------------------------------------------------  135 (228)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              +..+..||++.++++++++|+..|..    ..+.+.||||+..  +.++|+|||||++
T Consensus       136 --------~~~~~~L~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~--~~~~C~GDsGgPl  187 (228)
T 3h7o_A          136 --------DPKDHDLKSAQLTVVDLDECRTKYGP----IFLSLQVFCAQKV--GVSLESGDAGDPT  187 (228)
T ss_dssp             --------CGGGGBCEEEEEEEECHHHHHHHHTT----SCCCSSEEEEECT--TCCCCGGGTTCEE
T ss_pred             --------CCcccccccceeEEEcHHHHHHHhcC----ccCCceEEecCCC--CCcCCCCCCCCcc
Confidence                    23457899999999999999998752    2478999999953  3899999999986

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=100.00  E-value=2.1e-36  Score=345.44  Aligned_cols=200  Identities=32%  Similarity=0.616  Sum_probs=156.3

Q ss_pred             ccCCCcCCCCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCC
Q psy12777        379 EVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTE  457 (697)
Q Consensus       379 ~~CG~~~~~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~  457 (697)
                      ..||...  ..||+||.+|..++|||||+|++.. ....|+|||+||+++||||||||+.+.. ...+.|++|.+++...
T Consensus       378 ~~Cg~~~--~~rIvgG~~a~~~~~Pw~v~L~~~~-~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~  454 (625)
T 2f83_A          378 NECTTKI--KPRIVGGTASVRGEWPWQVTLHTTS-PTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEI  454 (625)
T ss_dssp             CSSCSCC--CSCCCSSSSCCTTSSTTEEEEEECS-SSSEEEEEEEECSSSEEEECGGGGSSCCCGGGEEEEESCSBGGGC
T ss_pred             cccCCCC--CCceECCEECCCCCCCeEEEEEEec-CCCcEEEEEEEECCCEEEEcHHhCCCCCCCceEEEEEEeccCCCC
Confidence            4799764  5799999999999999999998642 2357899999999999999999997643 4568899999876543


Q ss_pred             CCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCC
Q psy12777        458 EEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYG  536 (697)
Q Consensus       458 ~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~  536 (697)
                      ..  ..+.+.|.++++||+|+.....||||||||++|+.|+++|+|||||...... .+..|+|+|||.+..        
T Consensus       455 ~~--~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~--------  524 (625)
T 2f83_A          455 KE--DTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKL--------  524 (625)
T ss_dssp             CS--SCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------------
T ss_pred             CC--CceEEeEEEEEECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCC--------
Confidence            32  3456889999999999988899999999999999999999999999765432 588999999999865        


Q ss_pred             CCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccce
Q psy12777        537 HPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQI  616 (697)
Q Consensus       537 ~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~  616 (697)
                                                                                                      
T Consensus       525 --------------------------------------------------------------------------------  524 (625)
T 2f83_A          525 --------------------------------------------------------------------------------  524 (625)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        617 IPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       617 i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                          .+..+..||++.|+++++++|+..|..    ..+.++|||||...++.|+|+|||||||
T Consensus       525 --------------------~~~~s~~L~~~~v~i~~~~~C~~~~~~----~~i~~~~iCag~~~~~~d~C~GDSGGPL  579 (625)
T 2f83_A          525 --------------------RDKIQNTLQKAKIPLVTNEECQKRYRG----HKITHKMICAGYREGGKDACKGDSGGPL  579 (625)
T ss_dssp             ----------------------CCCSBCBCCEECCCCHHHHHTTCTT----SCCCTTBCCC----------CCCTTCEE
T ss_pred             --------------------CCcCCcccEEEEEEEcCHHHHHHHhcc----CCCCCCeEEeecCCCCCcCCCCCcccce
Confidence                                234568899999999999999987742    2478999999977778999999999987

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.5e-35  Score=302.29  Aligned_cols=183  Identities=20%  Similarity=0.328  Sum_probs=142.7

Q ss_pred             ccCCCcCCCCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCC
Q psy12777        379 EVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEE  458 (697)
Q Consensus       379 ~~CG~~~~~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~  458 (697)
                      -.||+...   +   |..+..++|||||+|++.   .+.++|||+||+++||||||||+..  ...+.|++|.+++..  
T Consensus        47 c~CG~~~~---~---g~~a~~~~~Pw~v~l~~~---~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~V~~G~~~~~~--  113 (283)
T 3f1s_B           47 CACGVLTS---E---KRAPDLQDLPWQVKLTNS---EGKDFCGGVIIRENFVLTTAKCSLL--HRNITVKTYFNRTSQ--  113 (283)
T ss_dssp             TCTTCCCC--------------CCTTEEEEECT---TSCEEEEEEEEETTEEEECHHHHTS--CSSCEEEECTTC-CC--
T ss_pred             cccCcccc---C---CccccccccCCEEEEEec---CCCeeeccEEecCCEEEEcHHhcCc--cCceEEEEeeeeCCC--
Confidence            37997653   1   999999999999999752   3468999999999999999999965  447899999876643  


Q ss_pred             CCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCC----CCCCCCEEEEEeccccCCCCcccc
Q psy12777        459 EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD----TNFVGTSAHVTGWGRLYEGRFRRS  534 (697)
Q Consensus       459 ~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~----~~~~G~~c~VtGWG~t~~g~~~~s  534 (697)
                         ..+.+.|.++++||+|+...+.||||||||++|+.|+++|+|||||...    ....+..|+|+|||.  .      
T Consensus       114 ---~~~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~--~------  182 (283)
T 3f1s_B          114 ---DPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR--N------  182 (283)
T ss_dssp             ---CCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBC--C------
T ss_pred             ---CcEEEEeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCC--C------
Confidence               4588999999999999999999999999999999999999999999864    223589999999998  2      


Q ss_pred             CCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccccc
Q psy12777        535 YGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS  614 (697)
Q Consensus       535 ~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~  614 (697)
                                                                                                      
T Consensus       183 --------------------------------------------------------------------------------  182 (283)
T 3f1s_B          183 --------------------------------------------------------------------------------  182 (283)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCC
Q psy12777        615 QIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDG  694 (697)
Q Consensus       615 ~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg  694 (697)
                                            .+..+..||++.|++++.++|+..|.     ..+.++||||+.. ++  .|+|||||+
T Consensus       183 ----------------------~~~~~~~L~~~~v~~~~~~~C~~~~~-----~~~~~~~~Ca~~~-~~--~~~gDSGgP  232 (283)
T 3f1s_B          183 ----------------------GTDLGNSLTTRPVTLVEGEECGQVLN-----VTVTTRTYCERSS-VA--AMHWMDGSV  232 (283)
T ss_dssp             -----------------------------CEEEEEEEECHHHHHHHHT-----SCCCTTEEEEECS-SC--GGGBCTTCE
T ss_pred             ----------------------CCCCCceeeEEEEeEeCHHHHhhhhc-----CCCCCCeEcccCC-CC--CCCCCCCCc
Confidence                                  12346789999999999999999874     2588999999853 33  567799998


Q ss_pred             C
Q psy12777        695 T  695 (697)
Q Consensus       695 ~  695 (697)
                      +
T Consensus       233 l  233 (283)
T 3f1s_B          233 V  233 (283)
T ss_dssp             E
T ss_pred             E
Confidence            7

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=100.00  E-value=9.7e-35  Score=287.08  Aligned_cols=176  Identities=26%  Similarity=0.492  Sum_probs=148.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||.+|..++|||||+|.        +.|||+||+++||||||||+.+. ....+.|++|.+++...    ..+.+.|.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~--------~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~----~~~~~~v~   68 (224)
T 3beu_A            1 VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSS----SAVKVRST   68 (224)
T ss_dssp             CBTCEECCTTTSTTEEEET--------TTEEEEEEETTEEEECGGGSCSSEEBCCCEEEESCSBTTCT----TCEEEEEE
T ss_pred             CCCCeECCCCCCCEEEEEC--------CceeEEEeeCCEEEEChhhcCCCCCcceEEEEeeEeecCCC----CceEEEEE
Confidence            7899999999999999983        45999999999999999999763 24568899999887543    24778999


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++++||+|+...+.||||||||++|+.+    .++||+..... .+..|+++|||.+..                     
T Consensus        69 ~i~~hp~y~~~~~~~DIALl~L~~~v~~----~~i~l~~~~~~-~~~~~~v~GwG~~~~---------------------  122 (224)
T 3beu_A           69 KVLQAPGFTKETYGKDWALIKLAQPINQ----PTLKIATTTAY-NQGTFTVAGWGANRE---------------------  122 (224)
T ss_dssp             EEEECTTCCCGGGSCCCEEEEESSCCCS----CCCEECCSSTT-SSSEEEEEESSCSST---------------------
T ss_pred             EEEeCCCcCCCcCCCCEEEEEeCCCCCC----Ccccccccccc-CCCEEEEEecCccCC---------------------
Confidence            9999999998889999999999999964    58899865432 466999999999876                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       123 --------------------------------------------------------------------------------  122 (224)
T 3beu_A          123 --------------------------------------------------------------------------------  122 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..||++.++++++++|+..+..    ..+.+.||||+...++.++|+||||||+
T Consensus       123 -------~~~~~~~l~~~~~~~~~~~~C~~~~~~----~~~~~~~~Ca~~~~~~~~~C~GDsGgPl  177 (224)
T 3beu_A          123 -------GGSQQRYLLKANVPFVSDAACRSSSSF----ILVANEMICAGYDTKQEDTCQGDSGGPM  177 (224)
T ss_dssp             -------TCCCCSBCEEEEEEEECHHHHHHHCSS----CCCGGGEEEECCSSSSCBCCTTCTTCEE
T ss_pred             -------CCcccceeeEeeCcccCHHHhhhhcCC----ccCCCCeEEeccCCCCCcCCCCcCCCee
Confidence                   234567899999999999999987641    2478899999976777899999999987

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=100.00  E-value=8.7e-35  Score=328.58  Aligned_cols=197  Identities=26%  Similarity=0.467  Sum_probs=124.3

Q ss_pred             ccCCCcCC---CCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCC
Q psy12777        379 EVCGRRLF---PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLS  455 (697)
Q Consensus       379 ~~CG~~~~---~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~  455 (697)
                      ..||.+..   ...||+||.+|..++|||||+|+.    ...++|||+||+++||||||||+.......+.|++|.+++.
T Consensus       307 ~~CG~~~~~~~~~~rIvgG~~a~~g~~Pw~v~l~~----~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~~G~~~~~  382 (565)
T 2xrc_A          307 LSCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKD----ASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWI  382 (565)
T ss_dssp             CCCCC--------------------CCTTBCEEEE----SSSCCCCCEEEETTEEEECHHHHTTCSSCCEEEEC------
T ss_pred             cccCCCCCcccCCCceECCEECCCCCCCcEEEEec----CCceeeeEEEEeCCEEEEChhhcccCCCcceEEEEEEeecc
Confidence            47998643   357999999999999999999975    34588999999999999999999876667889999998875


Q ss_pred             CCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCC----CeeeeecCCCCCCC-CCCEEEEEeccccCCCC
Q psy12777        456 TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQP----NIIPICVPEDDTNF-VGTSAHVTGWGRLYEGR  530 (697)
Q Consensus       456 ~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~----~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~  530 (697)
                      .... ...+.+.|.+|++||+|+...+.||||||||++|+.|++    +++|||||.....+ .+..|+|+|||.+..+ 
T Consensus       383 ~~~~-~~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~-  460 (565)
T 2xrc_A          383 HPDL-KRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDN-  460 (565)
T ss_dssp             --------CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC--------
T ss_pred             CCCC-CccEEEEEEEEEeCCCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCC-
Confidence            4331 135778999999999999999999999999999999874    68999999776543 5899999999998652 


Q ss_pred             ccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        531 FRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       531 ~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                                                                                                      
T Consensus       461 --------------------------------------------------------------------------------  460 (565)
T 2xrc_A          461 --------------------------------------------------------------------------------  460 (565)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCccc
Q psy12777        611 DLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEH  690 (697)
Q Consensus       611 ~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGD  690 (697)
                                                  ..+..||++.|+++++  |+..|..    ..+...|||||...++.|+|+||
T Consensus       461 ----------------------------~~~~~L~~~~v~i~~~--C~~~~~~----~~~~~~~iCAg~~~g~~d~C~GD  506 (565)
T 2xrc_A          461 ----------------------------ERVFSLQWGEVKLISN--CSKFYGN----RFYEKEMECAGTYDGSIDACKGD  506 (565)
T ss_dssp             ----------------------------------CEEEEEECSC--THHHHTT----SCCTTTEEEEEEC----------
T ss_pred             ----------------------------CccceeeEEeeeehHH--hHHhhcc----CcCCCceEEeCCCCCCCccCCCc
Confidence                                        2356899999999984  9988742    12345599999877788999999


Q ss_pred             CCCCC
Q psy12777        691 ARDGT  695 (697)
Q Consensus       691 SGgg~  695 (697)
                      |||+|
T Consensus       507 SGGPL  511 (565)
T 2xrc_A          507 SGGPL  511 (565)
T ss_dssp             CCCEE
T ss_pred             cccce
Confidence            99987

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=100.00  E-value=1.2e-33  Score=295.09  Aligned_cols=182  Identities=20%  Similarity=0.333  Sum_probs=153.0

Q ss_pred             cCCCcCCCCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCC
Q psy12777        380 VCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEE  459 (697)
Q Consensus       380 ~CG~~~~~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~  459 (697)
                      .||+...      .|..+..++|||||+|+..   .+.++|||+||+++||||||||+..  ...+.|++|.+++..   
T Consensus        89 ~cg~~~~------~G~~a~~~~~Pw~v~l~~~---~~~~~CgGtLIs~~~VLTAAHC~~~--~~~~~V~~G~~~~~~---  154 (317)
T 3h5c_B           89 ACGVLTS------EKRAPDLQDLPWQVKLTNS---EGKDFCGGVIIRENFVLTTAKCSLL--HRNITVKTYFNRTSQ---  154 (317)
T ss_dssp             CCCCCSC------CCSSCCTTCCTTEEEEECS---SSCEEEEEEEEETTEEEECHHHHHS--CSSCEEEECTTSCTT---
T ss_pred             ccccccc------ccccCccCCCCcEEEEecc---CCceeeeeEEeeCCEEEEChHhcCc--CCceEEEEeeecCCC---
Confidence            4776542      3889999999999999752   3468999999999999999999965  457899999876643   


Q ss_pred             CCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCC----CCCCCCEEEEEeccccCCCCccccC
Q psy12777        460 PYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD----TNFVGTSAHVTGWGRLYEGRFRRSY  535 (697)
Q Consensus       460 ~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~----~~~~G~~c~VtGWG~t~~g~~~~s~  535 (697)
                        ..+.+.|.++++||+|+...+.||||||||++|+.|+++|+|||||...    ....+..++|+|||.  .       
T Consensus       155 --~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~--~-------  223 (317)
T 3h5c_B          155 --DPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR--N-------  223 (317)
T ss_dssp             --SCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCT--T-------
T ss_pred             --CcEEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCC--C-------
Confidence              4588999999999999998999999999999999999999999999864    223689999999998  2       


Q ss_pred             CCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccc
Q psy12777        536 GHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQ  615 (697)
Q Consensus       536 ~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~  615 (697)
                                                                                                      
T Consensus       224 --------------------------------------------------------------------------------  223 (317)
T 3h5c_B          224 --------------------------------------------------------------------------------  223 (317)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        616 IIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       616 ~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                           .+..+..||++.|+++++++|++.|.     ..+.++||||+...   +.|+|||||++
T Consensus       224 ---------------------~~~~~~~L~~~~v~~~~~~~C~~~~~-----~~~~~~~~Ca~~~~---~~~~gDsGgPl  274 (317)
T 3h5c_B          224 ---------------------GTDLGNSLTTRPVTLVEGEECGQVLN-----VTVTTRTYCERSSV---AAMHWMDGSVV  274 (317)
T ss_dssp             ---------------------CCSSSCCCBCCEEEEECHHHHHHHHT-----CCCCTTEEEEECSC---CCCCCCTTCEE
T ss_pred             ---------------------CCCCCccceEEEEEEECHHHHhhhhc-----CcCCCceeECCCCC---CCcCCCCCCCE
Confidence                                 13346789999999999999999874     25889999998532   46899999987

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=100.00  E-value=7.3e-33  Score=323.69  Aligned_cols=195  Identities=32%  Similarity=0.569  Sum_probs=161.7

Q ss_pred             ccCCCcCCC----CCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEcccc
Q psy12777        379 EVCGRRLFP----SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHD  453 (697)
Q Consensus       379 ~~CG~~~~~----~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~d  453 (697)
                      ..||++...    ..||+||..|..++|||||+|+..   .+.++|||+||+++||||||||+... ....+.|++|.++
T Consensus       546 ~~CG~~~~~~~~~~~RIvGG~~a~~~~~PW~VsL~~~---~~~~~CGGSLIs~~wVLTAAHCv~~~~~~~~~~V~lG~~~  622 (791)
T 4dur_A          546 FDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTR---FGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQ  622 (791)
T ss_dssp             CCTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECT---TSCEEEEEEEEETTEEEECGGGGSSCCCGGGCEEEESCCB
T ss_pred             cCcCCcccccccCCCceECCEECCCCCCCeEEEEEec---CCCeEEEEEEEeCCEEEECHHHcCCcCCCceEEEEecccc
Confidence            479976542    369999999999999999999752   24689999999999999999999753 3467899999988


Q ss_pred             CCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCcc
Q psy12777        454 LSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFR  532 (697)
Q Consensus       454 l~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~  532 (697)
                      ......  ..+.+.|.++++||.+      ||||||||++++.|+++|+|||||.....+ .+..|+|+|||.+..    
T Consensus       623 ~~~~~~--~~q~~~V~~i~~hp~~------nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~----  690 (791)
T 4dur_A          623 EVNLEP--HVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQG----  690 (791)
T ss_dssp             SSSCCT--TCEEEEEEEEEECTTC------CSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC------
T ss_pred             ccCCCC--ccEEEEEEEEECCCCC------CceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCC----
Confidence            765433  4688999999999974      799999999999999999999999876443 589999999998754    


Q ss_pred             ccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        533 RSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       533 ~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                                                                                                      
T Consensus       691 --------------------------------------------------------------------------------  690 (791)
T 4dur_A          691 --------------------------------------------------------------------------------  690 (791)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCC
Q psy12777        613 WSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHAR  692 (697)
Q Consensus       613 ~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSG  692 (697)
                                               ...+..||++.|+++++++|+..+.   +...+.+.|||||...++.|+|+||||
T Consensus       691 -------------------------~~~s~~L~~~~v~ii~~~~C~~~~~---~~~~i~~~~iCAg~~~gg~daC~GDSG  742 (791)
T 4dur_A          691 -------------------------TFGAGLLKEAQLPVIENKVCNRYEF---LNGRVQSTELCAGHLAGGTDSCQGDSG  742 (791)
T ss_dssp             --------------------------CCTTBCEEEEEEEECHHHHTSTTT---TTTCCCTTEEEESCSSSCCCBCCSCTT
T ss_pred             -------------------------CCCCCeeEEEEEEEeCHHHhhcccc---cCCCCCCCeEEeccCCCCCCCCCCCcc
Confidence                                     1235789999999999999987532   123689999999988888999999999


Q ss_pred             CCCC
Q psy12777        693 DGTD  696 (697)
Q Consensus       693 gg~~  696 (697)
                      |+|.
T Consensus       743 GPLv  746 (791)
T 4dur_A          743 GPLV  746 (791)
T ss_dssp             CEEE
T ss_pred             cceE
Confidence            9873

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...

Probab=99.97  E-value=1e-31  Score=247.45  Aligned_cols=129  Identities=36%  Similarity=0.717  Sum_probs=113.8

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|+..   .+.++|||+||+++||||||||+..   ..+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~---~~~~~CgGsLIs~~~VLTAAHC~~~---~~~~v~~G~~~~~~~~~--~~~~~~v~~   72 (131)
T 1yph_C            1 IVNGEEAVPGSWPWQVSLQDK---TGFHFCGGSLINENWVVTAAHCGVT---TSDVVVAGEFDQGSSSE--KIQKLKIAK   72 (131)
T ss_dssp             CBTCEECCTTSSTTEEEEECT---TSCEEEEEEEEETTEEEECGGGCCC---TTSEEEESCSBTTCSSS--CCEEEEEEE
T ss_pred             CCCCEECCCCCcCcEEEEEeC---CCCEEEEEEEeeCCEEEECHHHCCC---CCeEEEEeEccCCCCCC--ceEEEEEEE
Confidence            789999999999999999752   3468999999999999999999975   56789999988765433  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccC
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLY  527 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~  527 (697)
                      +++||+|+...+.||||||||++|+.|+++|+|||||.....+ .+..|+++|||.+.
T Consensus        73 i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~  130 (131)
T 1yph_C           73 VFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTR  130 (131)
T ss_dssp             EEECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSC
T ss_pred             EEeCCCCCCCCCCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCccC
Confidence            9999999998999999999999999999999999999876543 68999999999875

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=99.97  E-value=2.4e-32  Score=299.38  Aligned_cols=209  Identities=22%  Similarity=0.344  Sum_probs=155.2

Q ss_pred             cccCCCccccCCCcCCCCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEE
Q psy12777        371 GINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRL  449 (697)
Q Consensus       371 ~~~~s~~~~~CG~~~~~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~L  449 (697)
                      ..+.......||....      ++..+..++|||||+|++.....+.++|||+||+++||||||||+... ....+.|++
T Consensus       201 ~i~~~~~~~~CG~~~~------~~~~~~~~~~Pw~v~l~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~  274 (497)
T 1rrk_A          201 MIDESQSLSLCGMVWE------HRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSV  274 (497)
T ss_dssp             HSCGGGGTTCTTCCCC------CTTCCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEE
T ss_pred             cccCCCCcCCCCCCCC------CCCCCCccccCcEEEEEEEcCCCCCceeEEEEecCCEEEECHHhCCCCCCceEEEEEe
Confidence            3344444678998642      245677899999999986433345689999999999999999999753 345789999


Q ss_pred             ccccCCCCCCCCCcEEEEEEEEEECCCCCCC---------CCCCceEEEecCcccccCCCeeeeecCCCCC------CCC
Q psy12777        450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPR---------TFEYDLALLRFYEPVKFQPNIIPICVPEDDT------NFV  514 (697)
Q Consensus       450 G~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~---------t~~nDIALLrL~~PV~fs~~V~PICLP~~~~------~~~  514 (697)
                      |.+          .+.+.|.++++||+|+..         .+.||||||||++|+.|+++|+|||||....      ...
T Consensus       275 G~~----------~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~  344 (497)
T 1rrk_A          275 GGE----------KRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPP  344 (497)
T ss_dssp             TTC----------SSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCT
T ss_pred             CCc----------cceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCC
Confidence            964          245789999999999864         5789999999999999999999999997531      225


Q ss_pred             CCEEEEEeccccCCCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeee
Q psy12777        515 GTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGA  594 (697)
Q Consensus       515 G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgG  594 (697)
                      +..|++.|||......                                             .....              
T Consensus       345 ~~~~~~~g~g~~~~~~---------------------------------------------~~~~~--------------  365 (497)
T 1rrk_A          345 TTTCQQQKEELLPAQD---------------------------------------------IKALF--------------  365 (497)
T ss_dssp             TCCHHHHHHHHSCSSE---------------------------------------------EEEEE--------------
T ss_pred             CCchhcccccccCCcc---------------------------------------------cccee--------------
Confidence            8889999999875420                                             00000              


Q ss_pred             eEeeCcEEEeecccccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeec---hhHHHHHhhhC-Cc----
Q psy12777        595 ALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVIN---NSLCETMYRAA-GF----  666 (697)
Q Consensus       595 slI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis---~~~C~~~y~~~-~~----  666 (697)
                                                                ....+..|+++.|++++   +++|++.+.+. ++    
T Consensus       366 ------------------------------------------~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~  403 (497)
T 1rrk_A          366 ------------------------------------------VSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVK  403 (497)
T ss_dssp             ------------------------------------------EEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCS
T ss_pred             ------------------------------------------eccCCCcceeeeEEEecCcccchhhhhhhhcccccccc
Confidence                                                      01135689999999999   78999754211 11    


Q ss_pred             --ccCcCCCeEEEeeCCC--CCCCCcccCCCCCC
Q psy12777        667 --IEHIPEIFICAGWRKG--SFDSCEEHARDGTD  696 (697)
Q Consensus       667 --~~~i~~~~ICAG~~~g--~~dtCqGDSGgg~~  696 (697)
                        ...+.++||||+...+  +.|+|+||||||+.
T Consensus       404 ~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~  437 (497)
T 1rrk_A          404 DISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLI  437 (497)
T ss_dssp             CGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEE
T ss_pred             cccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeE
Confidence              1357899999996543  57999999999973

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=99.97  E-value=7.2e-32  Score=297.28  Aligned_cols=135  Identities=24%  Similarity=0.430  Sum_probs=106.9

Q ss_pred             cccCCCcCCCCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCC
Q psy12777        378 KEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLST  456 (697)
Q Consensus       378 ~~~CG~~~~~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~  456 (697)
                      ...||.+      .++|.++..++|||||+|+.    .+.|+|||+||+++||||||||+... ....+.|++|.++.. 
T Consensus       217 ~~~CG~~------~~~g~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~-  285 (509)
T 2odp_A          217 DTICGVG------NMSANASDQERTPWHVTIKP----KSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQ-  285 (509)
T ss_dssp             SCCSSCC------CCCTTSCHHHHCTTEEEEEC--------CEEEEECSSSEEEECGGGC--------CEEEECCTTCT-
T ss_pred             CcccCCc------CCCCCccccCCCCcEEEEEe----CCCcEEEEEEEcCCEEEEcHHHcCCCCCcceEEEEeCCcccC-
Confidence            4689976      46899999999999999975    24689999999999999999999753 345689999987642 


Q ss_pred             CCCCCCcEEEEEEEEEECCCCCCC---------CCCCceEEEecCcccccCCCeeeeecCCCCC------CCCCCEEEEE
Q psy12777        457 EEEPYGYQERRVQIVASHPQFDPR---------TFEYDLALLRFYEPVKFQPNIIPICVPEDDT------NFVGTSAHVT  521 (697)
Q Consensus       457 ~~~~~~~q~~~V~~IiiHP~Yn~~---------t~~nDIALLrL~~PV~fs~~V~PICLP~~~~------~~~G~~c~Vt  521 (697)
                           ..+.+.|.++++||+|+..         .+.||||||||++|+.|+++|+|||||....      ...|..|++.
T Consensus       286 -----~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~  360 (509)
T 2odp_A          286 -----WGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDH  360 (509)
T ss_dssp             -----TCEEECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHH
T ss_pred             -----CCceeeeEEEEECCCCccccccccccccccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccc
Confidence                 2478899999999999864         5789999999999999999999999997532      1258889999


Q ss_pred             eccccCC
Q psy12777        522 GWGRLYE  528 (697)
Q Consensus       522 GWG~t~~  528 (697)
                      |||.+..
T Consensus       361 g~g~~~~  367 (509)
T 2odp_A          361 ENELLNK  367 (509)
T ss_dssp             HHHHSCS
T ss_pred             ccccccc
Confidence            9998755

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=99.96  E-value=3.2e-30  Score=295.79  Aligned_cols=202  Identities=21%  Similarity=0.340  Sum_probs=148.1

Q ss_pred             cccCCCcCCCCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCC
Q psy12777        378 KEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLST  456 (697)
Q Consensus       378 ~~~CG~~~~~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~  456 (697)
                      ...||..      ..+|..+..++|||+|.|.......+.++|||+||+++||||||||+... ....+.|++|...   
T Consensus       450 ~~~CG~~------~~~~~~~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~---  520 (741)
T 3hrz_D          450 LSLCGMV------WEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK---  520 (741)
T ss_dssp             TTSTTCC------CCC---CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC-----CCEEEEETTCS---
T ss_pred             ccccccc------cccCCcccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhccccCCcceEEEEeCCCc---
Confidence            4678765      34689999999999999987433345789999999999999999999753 3567899999542   


Q ss_pred             CCCCCCcEEEEEEEEEECCCCCCCC---------CCCceEEEecCcccccCCCeeeeecCCCCC------CCCCCEEEEE
Q psy12777        457 EEEPYGYQERRVQIVASHPQFDPRT---------FEYDLALLRFYEPVKFQPNIIPICVPEDDT------NFVGTSAHVT  521 (697)
Q Consensus       457 ~~~~~~~q~~~V~~IiiHP~Yn~~t---------~~nDIALLrL~~PV~fs~~V~PICLP~~~~------~~~G~~c~Vt  521 (697)
                             +.+.|.++++||+|+...         +.||||||||++|+.|+++|+|||||....      ...+..|+++
T Consensus       521 -------~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~  593 (741)
T 3hrz_D          521 -------RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQ  593 (741)
T ss_dssp             -------CCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHH
T ss_pred             -------eEEEEEEEEECCCCCcccccccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccc
Confidence                   457899999999998643         789999999999999999999999996431      1258899999


Q ss_pred             eccccCCCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcE
Q psy12777        522 GWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENW  601 (697)
Q Consensus       522 GWG~t~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~  601 (697)
                      |||.+....                                             ..+..                     
T Consensus       594 gwg~~~~~~---------------------------------------------~~~~~---------------------  607 (741)
T 3hrz_D          594 KEELLPAQD---------------------------------------------IKALF---------------------  607 (741)
T ss_dssp             HHHHSCSSE---------------------------------------------EEEEE---------------------
T ss_pred             ccccccccc---------------------------------------------cccee---------------------
Confidence            999986620                                             00000                     


Q ss_pred             EEeecccccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeec---hhHHHHHhhhCC-------cccCcC
Q psy12777        602 AVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVIN---NSLCETMYRAAG-------FIEHIP  671 (697)
Q Consensus       602 VLSAAHC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis---~~~C~~~y~~~~-------~~~~i~  671 (697)
                                                         ....+..|+++.+++++   ++.|+..+.+..       +...+.
T Consensus       608 -----------------------------------~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~  652 (741)
T 3hrz_D          608 -----------------------------------VSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVT  652 (741)
T ss_dssp             -----------------------------------EEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSC
T ss_pred             -----------------------------------ccccccccccceeEeecCcccchhhhhhhhccccccccccccccC
Confidence                                               01235689999999998   899998654321       124689


Q ss_pred             CCeEEEeeCCC--CCCCCcccCCCCCC
Q psy12777        672 EIFICAGWRKG--SFDSCEEHARDGTD  696 (697)
Q Consensus       672 ~~~ICAG~~~g--~~dtCqGDSGgg~~  696 (697)
                      ++|||||...+  +.|+|+|||||+|.
T Consensus       653 ~~~lCag~~~~~~~~~~C~GDSGGPL~  679 (741)
T 3hrz_D          653 PRFLCTGGVSPYADPNTCRGDSGGPLI  679 (741)
T ss_dssp             TTEEEEESSSSSCCCCCCGGGTTCEEE
T ss_pred             CCeEecCCcCCCCCCCcCcCcccCceE
Confidence            99999997553  67899999999873

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=99.94  E-value=1.6e-28  Score=241.89  Aligned_cols=123  Identities=13%  Similarity=0.183  Sum_probs=98.6

Q ss_pred             CCCeeCCeeCCCCCcce--EEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCce----EEEEccccCCCCCCCC
Q psy12777        388 SSRIVGGEKATFGKWPW--QISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDL----LLRLGEHDLSTEEEPY  461 (697)
Q Consensus       388 ~~RIVGG~~A~~GewPW--~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l----~V~LG~~dl~~~~~~~  461 (697)
                      ..||+||.+     |||  ++.+.     .+.++|+|+||+++||||||||+.+.....+    .|++|.+++...    
T Consensus         8 ~~rI~~g~~-----~P~~~~~~~~-----~~~~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~----   73 (215)
T 1p3c_A            8 RTKVANTRV-----APYNSIAYIT-----FGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAV----   73 (215)
T ss_dssp             CEECSCTTS-----TTGGGEEEEE-----CSSCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCT----
T ss_pred             CEEecCCCc-----CCCeEEEEEE-----cCCceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCC----
Confidence            358889875     588  44443     2368999999999999999999976444445    899999876542    


Q ss_pred             CcEEEEEEEEEECCCCC-CCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCC
Q psy12777        462 GYQERRVQIVASHPQFD-PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE  528 (697)
Q Consensus       462 ~~q~~~V~~IiiHP~Yn-~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~  528 (697)
                       .+.+.|.++++||+|+ .....||||||||+++  |+++++|||||.... ..+..|+++|||.+..
T Consensus        74 -~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~--~~~~v~pi~l~~~~~-~~g~~~~~~Gwg~~~~  137 (215)
T 1p3c_A           74 -NGSANMTEFYVPSGYINTGASQYDFAVIKTDTN--IGNTVGYRSIRQVTN-LTGTTIKISGYPGDKM  137 (215)
T ss_dssp             -TCCEEEEEEECCHHHHHHCCGGGCCEEEEESSC--HHHHHCCCCBCCCSC-CTTCEEEEEECCHHHH
T ss_pred             -CCeEEEEEEEeCCccccCCCcccCEEEEEECCC--CcccceeeecCCCcc-cCCCeEEEecCCCCCc
Confidence             2367899999999994 5677899999999996  678899999998654 3699999999998654

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=99.90  E-value=6.7e-25  Score=219.24  Aligned_cols=122  Identities=12%  Similarity=0.075  Sum_probs=98.6

Q ss_pred             CCCcceEEEEEEEecCCceeeeeEEEee---CcceeeecccccCCC----CCceEEEEccccCCCCCCCCCcEEEEEEEE
Q psy12777        399 FGKWPWQISLRQWIRSTYLHKCGAALFN---ENWAVTAAHCVEDVP----PSDLLLRLGEHDLSTEEEPYGYQERRVQIV  471 (697)
Q Consensus       399 ~GewPW~VsL~~~~~~~~~~~CGGTLIS---~rwVLTAAHC~~~~~----~~~l~V~LG~~dl~~~~~~~~~q~~~V~~I  471 (697)
                      +++|||++.|++.. .+..|+|||+||+   ++||||||||+....    ...+.|++|.++...     ..+.+.|.++
T Consensus         3 ~~~~p~~g~l~~~~-~~~~~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~-----~~~~~~v~~~   76 (218)
T 3cp7_A            3 PADSPHIGKVFFST-NQGDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGES-----EHGVWAAEEL   76 (218)
T ss_dssp             CTTCTTEEEEEEEE-TTEEEEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCC-----TTCCEEEEEE
T ss_pred             CCCCceEEEEEEEc-CCCCeEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCC-----CccEEEEEEE
Confidence            57899999998753 3457899999999   999999999997532    235778889776432     2245789999


Q ss_pred             EECCCCCC-CCCCCceEEEecCcc--cccCCCee-eeecCCCCCCCCCCEEEEEeccccCC
Q psy12777        472 ASHPQFDP-RTFEYDLALLRFYEP--VKFQPNII-PICVPEDDTNFVGTSAHVTGWGRLYE  528 (697)
Q Consensus       472 iiHP~Yn~-~t~~nDIALLrL~~P--V~fs~~V~-PICLP~~~~~~~G~~c~VtGWG~t~~  528 (697)
                      ++||+|+. ....||||||||++|  +.|++.|+ +++|+...  ..+..|+++|||.+..
T Consensus        77 ~~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~~--~~g~~~~v~GwG~~~~  135 (218)
T 3cp7_A           77 VTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQ--PRGQYYSAYGYPAAAP  135 (218)
T ss_dssp             EECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCSC--CSSCEEEEEECCCSTT
T ss_pred             EECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeecC--CCCCEEEEEeCCCCCC
Confidence            99999974 467899999999999  88889999 99998643  2589999999998753

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=99.84  E-value=1.5e-21  Score=196.21  Aligned_cols=127  Identities=17%  Similarity=0.193  Sum_probs=91.3

Q ss_pred             eCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCC--CceEEEEccccCCCCCCCCCcEEEEEEEEEE
Q psy12777        396 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP--SDLLLRLGEHDLSTEEEPYGYQERRVQIVAS  473 (697)
Q Consensus       396 ~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~--~~l~V~LG~~dl~~~~~~~~~q~~~V~~Iii  473 (697)
                      ++..++|||++.+....  .+.++|+|+||+++||||||||+.+...  ..+.+..|..+..........+.+.+..++.
T Consensus        35 ~a~~~~~p~~~~v~i~~--~~~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~  112 (242)
T 1agj_A           35 EKDRQKYPYNTIGNVFV--KGQTSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQ  112 (242)
T ss_dssp             TTGGGSTTGGGEEEEEE--TTTEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEES
T ss_pred             cccccccccceEEEEEE--CCCccEEEEEEeCCEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEe
Confidence            46778999987665432  2357999999999999999999975433  2344444776543211000124567888888


Q ss_pred             CCCCCCCCCCCceEEEecCcccc---cCCCeeeeecCCCCCCCCCCEEEEEeccccCC
Q psy12777        474 HPQFDPRTFEYDLALLRFYEPVK---FQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE  528 (697)
Q Consensus       474 HP~Yn~~t~~nDIALLrL~~PV~---fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~  528 (697)
                      || |+   ..+|||||||+.++.   |++.++||||+.......|..|+++|||....
T Consensus       113 ~~-~~---~~~DiAll~l~~~~~~~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~  166 (242)
T 1agj_A          113 EP-FG---AGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHK  166 (242)
T ss_dssp             CT-TC---TTSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTS
T ss_pred             CC-CC---CCCcEEEEEEcCCCccccccccccceecCccccCCCCCEEEEEeCCCCCC
Confidence            98 74   578999999999964   67789999998654434699999999998644

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=99.83  E-value=1.1e-20  Score=194.30  Aligned_cols=121  Identities=13%  Similarity=0.082  Sum_probs=89.9

Q ss_pred             CCCCCcceEEEEEEE-ecCCceeeeeEEEeeCcceeeecccccCCC--CCceEEEEccccCCCCCCCCCcEEEEEEEEEE
Q psy12777        397 ATFGKWPWQISLRQW-IRSTYLHKCGAALFNENWAVTAAHCVEDVP--PSDLLLRLGEHDLSTEEEPYGYQERRVQIVAS  473 (697)
Q Consensus       397 A~~GewPW~VsL~~~-~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~--~~~l~V~LG~~dl~~~~~~~~~q~~~V~~Iii  473 (697)
                      +..++|||++.+... ....+.++|+|+||+++||||||||+....  ...+.|++|.++......    ..+.+.+++.
T Consensus        12 ~~~~~~P~~~~v~l~~~~~~g~~~CgG~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~----g~~~~~~i~~   87 (268)
T 1wcz_A           12 TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPN----GGFTAEQITK   87 (268)
T ss_dssp             SCTTSGGGTTEEEEEEEC-CCEEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTT----CCEEEEEEEE
T ss_pred             cCCCCCCccEEEEEEEEcCCCCEEEEEEEEECCEEEEChhhCCCccCCcceEEEEecccCcccccC----CcEEEEEEec
Confidence            567888987654322 122346899999999999999999997532  245899999877543222    2356788888


Q ss_pred             CCCCCCCCCCCceEEEecCccc---ccCCCeeeeecCCCCCCCCCCEEEEEeccccC
Q psy12777        474 HPQFDPRTFEYDLALLRFYEPV---KFQPNIIPICVPEDDTNFVGTSAHVTGWGRLY  527 (697)
Q Consensus       474 HP~Yn~~t~~nDIALLrL~~PV---~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~  527 (697)
                      |+.      .+|||||||++++   .|+..++|+||+.......|..|+++|||...
T Consensus        88 ~~~------~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~  138 (268)
T 1wcz_A           88 YSG------EGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDK  138 (268)
T ss_dssp             CSS------SSCCEEEEECCCTTSCCHHHHSCCCCBCCCSSCCTTCEEEEEECCTTS
T ss_pred             CCC------CCcEEEEEecCcccccccccccceeecccccccCCCCEEEEEECCCCC
Confidence            753      5899999999997   47788999999865433469999999999653

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=99.82  E-value=4.8e-20  Score=190.23  Aligned_cols=120  Identities=12%  Similarity=0.073  Sum_probs=90.5

Q ss_pred             CCCCCcceEEE--EEEEecCCceeeeeEEEeeCcceeeecccccCCCC--CceEEEEccccCCCCCCCCCcEEEEEEEEE
Q psy12777        397 ATFGKWPWQIS--LRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP--SDLLLRLGEHDLSTEEEPYGYQERRVQIVA  472 (697)
Q Consensus       397 A~~GewPW~Vs--L~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~--~~l~V~LG~~dl~~~~~~~~~q~~~V~~Ii  472 (697)
                      +..++|||++.  |... ...+.++|+|+||+++||||||||+.....  ..+.|++|.++......    ..+.+.+++
T Consensus        12 ~~~~~~P~~~~v~i~~~-~~~~~~~C~G~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~----g~~~~~~i~   86 (274)
T 2o8l_A           12 TDTTNGHYAPVTYIQVE-APTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPN----GGFTAEQIT   86 (274)
T ss_dssp             SSTTSGGGTTEEEEEEE-ETTEEEEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTT----CCEEEEEEE
T ss_pred             cCCCCCCcceEEEEEEE-cCCCCEEEEEEEEECCEEEEChhhCcccCCCcceEEEEecccCcccccC----ccEEEEEEE
Confidence            56678888755  4432 223568999999999999999999975332  35899999876543222    246788888


Q ss_pred             ECCCCCCCCCCCceEEEecCccc---ccCCCeeeeecCCCCCCCCCCEEEEEeccccC
Q psy12777        473 SHPQFDPRTFEYDLALLRFYEPV---KFQPNIIPICVPEDDTNFVGTSAHVTGWGRLY  527 (697)
Q Consensus       473 iHP~Yn~~t~~nDIALLrL~~PV---~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~  527 (697)
                      .|+.      .+|||||||++++   .|+..++||||+.......|..|+++|||...
T Consensus        87 ~~~~------~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~  138 (274)
T 2o8l_A           87 KYSG------EGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDK  138 (274)
T ss_dssp             ECSS------SSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTS
T ss_pred             eCCC------CCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCC
Confidence            8863      5899999999997   47889999999865433469999999999753

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B

Probab=99.81  E-value=6.1e-20  Score=173.05  Aligned_cols=108  Identities=25%  Similarity=0.568  Sum_probs=90.8

Q ss_pred             CCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccccCCCcc
Q psy12777        477 FDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRI  556 (697)
Q Consensus       477 Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~  556 (697)
                      ++...+.||||||||++++.|+++|+|||||..... .+..|+++|||.+..+.                          
T Consensus         1 ~d~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~v~GWG~~~~~~--------------------------   53 (152)
T 2pka_B            1 ADGKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPE-LGSTCEASGWGSIEPGP--------------------------   53 (152)
T ss_dssp             CCCSBCTTCCEEEEESSCCCCCSSCCCCCCCSSCCC-TTCEEEEEESSCSSCCS--------------------------
T ss_pred             CCCCCCCCCEEEEEECCCCcCCCCEEeEECCCCCCC-CCCEEEEEecccccCCC--------------------------
Confidence            355678899999999999999999999999987653 58999999999987620                          


Q ss_pred             cCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccccccccc
Q psy12777        557 LFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALA  636 (697)
Q Consensus       557 ~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~  636 (697)
                                                                                                     .
T Consensus        54 -------------------------------------------------------------------------------~   54 (152)
T 2pka_B           54 -------------------------------------------------------------------------------D   54 (152)
T ss_dssp             -------------------------------------------------------------------------------S
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           0


Q ss_pred             CCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       637 ~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                      ....+..||++.|+++++++|+..|.     ..+.++||||+...++.++|+|||||++
T Consensus        55 ~~~~~~~L~~~~~~i~~~~~C~~~~~-----~~~~~~~iCa~~~~~~~~~C~GDsGgPL  108 (152)
T 2pka_B           55 DFEFPDEIQCVQLTLLQNTFCADAHP-----DKVTESMLCAGYLPGGKDTCMGDSGGPL  108 (152)
T ss_dssp             CCCCCSBCEEEEEEEECHHHHHHHCS-----SBCCTTEEEEECTTSSCBCCTTCTTCEE
T ss_pred             cCCCCccceEEEeEEcCHHHhhhhhc-----CCCCCCEEeeccCCCCCcccCCccccce
Confidence            01457889999999999999998763     2478999999976678899999999987

>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A

Probab=99.81  E-value=1.3e-19  Score=153.43  Aligned_cols=79  Identities=34%  Similarity=0.636  Sum_probs=68.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||||+|+.    ...++|||+||+++||||||||+.+    .+.|++|.+++.....  ..+.+.|.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGslIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~--~~~~~~v~~   70 (80)
T 2pka_A            1 IIGGRECEKNSHPWQVAIYH----YSSFQCGGVLVNPKWVLTAAHCKND----NYEVWLGRHNLFENEN--TAQFFGVTA   70 (80)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCS----CCEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCceEEEEEEEcCCEEEECHHHCCC----CcEEEEeeeEcCCCCC--CcEEEEEEE
Confidence            78999999999999999975    2468999999999999999999964    4679999998765443  358899999


Q ss_pred             EEECCCCCC
Q psy12777        471 VASHPQFDP  479 (697)
Q Consensus       471 IiiHP~Yn~  479 (697)
                      +++||+|+.
T Consensus        71 i~~Hp~y~~   79 (80)
T 2pka_A           71 DFPHPGFNL   79 (80)
T ss_dssp             EEECTTTTT
T ss_pred             EEECcCCCC
Confidence            999999974

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=99.79  E-value=1.7e-19  Score=182.68  Aligned_cols=124  Identities=15%  Similarity=0.209  Sum_probs=92.1

Q ss_pred             CCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCC--CceEEEEccccCCC-CCCCCCcEEEEEEEEEE
Q psy12777        397 ATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP--SDLLLRLGEHDLST-EEEPYGYQERRVQIVAS  473 (697)
Q Consensus       397 A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~--~~l~V~LG~~dl~~-~~~~~~~q~~~V~~Iii  473 (697)
                      +..++|||++.+....  .+.++|+|+||+++||||||||+.+...  ..+.++.|..+... .........+.+..++.
T Consensus        29 ~~~~~~P~~~~~~i~~--~~~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~  106 (246)
T 1qtf_A           29 TDNARSPYNSVGTVFV--KGSTLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKE  106 (246)
T ss_dssp             SCCSSTTGGGEEEEEE--TTTEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEES
T ss_pred             hhcCcCchhcEEEEEE--CCCceEEEEEEECCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEe
Confidence            5678899997654322  2358999999999999999999975433  45788888765432 11101124677888999


Q ss_pred             CCCCCCCCCCCceEEEecCccc---ccCCCeeeeecCCCCCCCCCCEEEEEecccc
Q psy12777        474 HPQFDPRTFEYDLALLRFYEPV---KFQPNIIPICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       474 HP~Yn~~t~~nDIALLrL~~PV---~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                      || |+   ..+|||||+|+.++   .|++.++|+||+.......|+.|+++||+..
T Consensus       107 hp-~~---~~~DiALLkl~~~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g  158 (246)
T 1qtf_A          107 SP-YG---QGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYN  158 (246)
T ss_dssp             CT-TC---TTSCCEEEEECCCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTT
T ss_pred             CC-CC---CCCCEEEEEEeCCccccccccceeeeecCCccccCCCCEEEEEECCCC
Confidence            99 64   57899999999998   6777899999996544346999999999764

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=99.77  E-value=4.4e-19  Score=172.29  Aligned_cols=112  Identities=13%  Similarity=0.188  Sum_probs=80.6

Q ss_pred             eCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECC
Q psy12777        396 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHP  475 (697)
Q Consensus       396 ~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP  475 (697)
                      .+..++|||+|.++       .++|+|+||+++||||||||+.+... ...+++... ....    ....+.+.+++.|+
T Consensus         7 ~~~~~~~P~~~~~~-------~~~c~G~lI~~~~VLTaaHcv~~~~~-~~~v~v~~~-~~~~----~~~~~~~~~i~~~~   73 (204)
T 2vid_A            7 VKDTNIFPYTGVVA-------FKSATGFVVGKNTILTNKHVSKNYKV-GDRITAHPN-SDKG----NGGIYSIKKIINYP   73 (204)
T ss_dssp             CSCTTSTTGGGEEE-------CSSCEEEEEETTEEEECHHHHTTCCT-TCEEEESCC-SSSC----CSCEEEEEEEEECS
T ss_pred             eccCCcCchhheEE-------eeeEEEEEEECCEEEEChhHCCCccC-CceEEEEec-cccC----CCcEEEeeEEecCC
Confidence            47789999999663       24799999999999999999975332 123333211 1111    23456777887765


Q ss_pred             CCCCCCCCCceEEEecCc--------ccccCCCeeeeecCCCCCCCCCCEEEEEeccccCC
Q psy12777        476 QFDPRTFEYDLALLRFYE--------PVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE  528 (697)
Q Consensus       476 ~Yn~~t~~nDIALLrL~~--------PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~  528 (697)
                      .      .+|||||||+.        ++.|++.++|+||+..  ...|..++++|||....
T Consensus        74 ~------~~DiAll~l~~~~~~~~~~~~~~~~~v~pi~l~~~--~~~g~~~~~~G~g~~~~  126 (204)
T 2vid_A           74 G------KEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAAG--AKAGERIKVIGYPHPYK  126 (204)
T ss_dssp             S------SSCCEEEEECSEEEEEETTEEEHHHHCCCCCBCSC--CCTTCEEEEEECCCCCC
T ss_pred             C------CCeEEEEEEcCcccccccccccccccccccccCCc--CCCCCEEEEEeCCCCCC
Confidence            2      57999999995        6778888999999852  23699999999997543

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=99.77  E-value=2.2e-19  Score=175.05  Aligned_cols=110  Identities=15%  Similarity=0.128  Sum_probs=79.8

Q ss_pred             eCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECC
Q psy12777        396 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHP  475 (697)
Q Consensus       396 ~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP  475 (697)
                      .+..++|||||.+.       .++|+|+||+++||||||||+.+.......|+++......     ..+.+.+.+++.+ 
T Consensus         7 i~~~~~~P~~v~~~-------~~~c~G~lI~~~~VLTaaHcv~~~~~~~~~v~v~~~~~~~-----~~~~~~~~~i~~~-   73 (200)
T 2w7s_A            7 ITDATKEPYNSVVA-------FVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGK-----GGGNYDVKDIVEY-   73 (200)
T ss_dssp             ESCTTSTTGGGEEE-------ETTEEEEEEETTEEEECHHHHHHHHHTTCCEEETCCSSSC-----CCCEECEEEEEEC-
T ss_pred             eeccccCCcccccc-------cceEEEEEEECCEEEEChhhcCCcccCCcEEEEEecCccC-----CCcEEEEEEEecC-
Confidence            47789999999874       2579999999999999999986422112345555432211     2345666666643 


Q ss_pred             CCCCCCCCCceEEEecCcc----cccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        476 QFDPRTFEYDLALLRFYEP----VKFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       476 ~Yn~~t~~nDIALLrL~~P----V~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                        +.   .+|||||||+.+    +.|++.++||||+..  ...|+.++++||+.
T Consensus        74 --~~---~~DiAll~l~~~~~~~~~~~~~v~pi~l~~~--~~~g~~v~v~G~p~  120 (200)
T 2w7s_A           74 --PG---KEDLAIVHVHETSTEGLNFNKNVSYTKFADG--AKVKDRISVIGYPK  120 (200)
T ss_dssp             --SS---SSSCEEEEECSBCTTSCBGGGSCCCCCBCCC--CCTTCEEEEEECTT
T ss_pred             --CC---cceEEEEEECCCCCCcccccccccceecccc--CCCCCEEEEEECCC
Confidence              22   579999999985    889999999999732  23699999999864

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=99.77  E-value=1e-19  Score=188.44  Aligned_cols=92  Identities=14%  Similarity=0.225  Sum_probs=62.7

Q ss_pred             CceeeeeEEEeeC------cceeeecccccCC--CCCceEEEEccccCCCCCC---------CCCcEEEEEEEEEECCCC
Q psy12777        415 TYLHKCGAALFNE------NWAVTAAHCVEDV--PPSDLLLRLGEHDLSTEEE---------PYGYQERRVQIVASHPQF  477 (697)
Q Consensus       415 ~~~~~CGGTLIS~------rwVLTAAHC~~~~--~~~~l~V~LG~~dl~~~~~---------~~~~q~~~V~~IiiHP~Y  477 (697)
                      .+.|+|||+||++      +||||||||+...  ....+.|++|.........         ......+.+..+++|+. 
T Consensus        31 ~g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~i~h~~-  109 (268)
T 1arb_A           31 SGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPASGANGDGSMSQTQSGSTVKATY-  109 (268)
T ss_dssp             TTEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTSGGGGSCCCCCCCCEEECEEEEEEE-
T ss_pred             CCccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccccccccccCCcceEEeccceEecCC-
Confidence            3579999999998      6999999998642  2345778877543221100         00111233677888883 


Q ss_pred             CCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCC
Q psy12777        478 DPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE  528 (697)
Q Consensus       478 n~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~  528 (697)
                          ..||||||||++++.                 .+..++++|||++..
T Consensus       110 ----~~nDIALLrL~~~v~-----------------~~~~~~vsGWG~t~~  139 (268)
T 1arb_A          110 ----ATSDFTLLELNNAAN-----------------PAFNLFWAGWDRRDQ  139 (268)
T ss_dssp             ----TTTTEEEEEESSCCC-----------------GGGCCEEBCEECCSC
T ss_pred             ----CCCceEEEEecCCCC-----------------CCCceEEeCcCccCC
Confidence                569999999999751                 244678999999876

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=99.73  E-value=5.8e-18  Score=167.33  Aligned_cols=108  Identities=11%  Similarity=0.169  Sum_probs=80.3

Q ss_pred             CCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCCCCCCCcEEEEEEEEEECC
Q psy12777        397 ATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHP  475 (697)
Q Consensus       397 A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP  475 (697)
                      +..++|||+|.+.       .++|+|+||+++||||||||+.+.. ...+.|++|...  .     ..+.+.+.+++.+ 
T Consensus         9 ~~~~~~P~~v~~~-------~~~c~G~lI~~~~VLTaaHcv~~~~~~~~i~v~~~~~~--~-----~g~~~~~~~v~~~-   73 (210)
T 2as9_A            9 KDTNNFPYNGVVS-------FKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDK--G-----NGGIYKIKSISDY-   73 (210)
T ss_dssp             SCTTSTTGGGEEE-------CSSCEEEEEETTEEEECHHHHHHCCTTCEEEESCCGGG--C-----CSCEEEEEEEEEC-
T ss_pred             ecCCcCCeEEEEE-------eeeEEEEEEeCCEEEECHhHCCccCCCCEEEEEeCccc--C-----CCCEEEEEEEEeC-
Confidence            5578999999763       2579999999999999999996532 235666665421  1     1245666666653 


Q ss_pred             CCCCCCCCCceEEEecCc--------ccccCCCeeeeecCCCCCCCCCCEEEEEecccc
Q psy12777        476 QFDPRTFEYDLALLRFYE--------PVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       476 ~Yn~~t~~nDIALLrL~~--------PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                        +   ..+|||||||+.        ++.|++.++|+||+.  ....|+.++++|||..
T Consensus        74 --~---~~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~--~~~~g~~v~v~G~p~~  125 (210)
T 2as9_A           74 --P---GDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAK--DAKVDDKIKVIGYPLP  125 (210)
T ss_dssp             --S---SSSSCEEEEECSEEEEEETTEEEGGGSCCCCCBCS--CCCTTCEEEEEECSST
T ss_pred             --C---CCCcEEEEEecCccccccccccccccccceeecCC--CCCCCCEEEEEeCCCC
Confidence              2   258999999998        688999999999973  2236999999999874

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=99.38  E-value=3.2e-14  Score=137.69  Aligned_cols=89  Identities=13%  Similarity=0.201  Sum_probs=60.3

Q ss_pred             eeeee-EEEee---CcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecC
Q psy12777        417 LHKCG-AALFN---ENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFY  492 (697)
Q Consensus       417 ~~~CG-GTLIS---~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~  492 (697)
                      .+.|+ |.++.   ++||||||||+...  ..+.|..+     .     ...   +..+ .+.+|    ..+|||||||+
T Consensus        11 ~~~ct~Gf~v~~~~~~~ilTaaHcv~~~--~~~~v~~~-----~-----~~~---~g~~-~~~~~----~~~DiAll~l~   70 (185)
T 2qa9_E           11 TGRCSLGFNVRSGSTYYFLTAGHCTDGA--TTWWANSA-----R-----TTV---LGTT-SGSSF----PNNDYGIVRYT   70 (185)
T ss_dssp             SCEEECCEEEEETTEEEEEECHHHHTTC--SEEESSTT-----S-----CSE---EEEE-EEEEC----SBSCEEEEEEC
T ss_pred             CCcEeccEEEEECCceEEEECcccCCCC--CcEEecCC-----C-----ceE---eEEE-ecccc----CCCCEEEEEec
Confidence            35798 88886   47999999999752  23332111     0     001   1111 22232    35899999999


Q ss_pred             c-ccccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        493 E-PVKFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       493 ~-PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                      + ++.+++.++|++|+.......|+.|.++||+.
T Consensus        71 ~~~~~~~~~v~~~~l~~~~~~~~g~~v~~~Gw~~  104 (185)
T 2qa9_E           71 NTTIPKDGTVGGQDITSAANATVGMAVTRRGSTT  104 (185)
T ss_dssp             CSSSCCCCEETTEECCEECCCCTTCEEEEEETTT
T ss_pred             CCCccccCccceeeeCCcccCCCCCEEEEecCCC
Confidence            8 99999999999998543334699999999953

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=99.38  E-value=2.5e-12  Score=129.25  Aligned_cols=99  Identities=16%  Similarity=0.226  Sum_probs=71.2

Q ss_pred             cceEEEEEEEec-CCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCC
Q psy12777        402 WPWQISLRQWIR-STYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR  480 (697)
Q Consensus       402 wPW~VsL~~~~~-~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~  480 (697)
                      -|.+|.|..... ......|.|+||+++||||||||+.+  ...+.|+++.            ..+....+..|+.    
T Consensus        41 ~~svV~I~~~~~~~~~~~~GsG~iI~~~~VlTaaH~v~~--~~~~~V~~~~------------~~~~~~~v~~~~~----  102 (237)
T 3k6y_A           41 EPSVVKIRSLAPRCQKVLEGTGFVISPDRVMTNAHVVAG--SNNVTVYAGD------------KPFEATVVSYDPS----  102 (237)
T ss_dssp             GGGEEEEEEEEGGGTEEEEEEEEEEETTEEEECGGGTTT--CSEEEEEETT------------EEEECEEEEEETT----
T ss_pred             cCCEEEEEEEecCCCcceeEEEEEEECCEEEECHHHcCC--CceEEEEECC------------cEEEEEEEEEcCC----
Confidence            377888865332 23356799999999999999999975  4567887764            1223344455553    


Q ss_pred             CCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccC
Q psy12777        481 TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLY  527 (697)
Q Consensus       481 t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~  527 (697)
                         +|||||||+     +..+++++|+. .....|+.++++||+...
T Consensus       103 ---~DiAll~l~-----~~~~~~~~l~~-~~~~~G~~v~v~G~p~g~  140 (237)
T 3k6y_A          103 ---VDVAILAVP-----HLPPPPLVFAA-EPAKTGADVVVLGYPGGG  140 (237)
T ss_dssp             ---TTEEEEECT-----TCCSCCCCBCS-SCCCTTCEEEEEECGGGC
T ss_pred             ---CCEEEEEeC-----CCCCCceecCC-CCCCCCCEEEEEECCCCC
Confidence               699999998     45688999983 333369999999997653

>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A

Probab=99.30  E-value=1.7e-12  Score=109.52  Aligned_cols=45  Identities=38%  Similarity=0.865  Sum_probs=40.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGslIs~~~VLTAAHC~~~   45 (80)
T 2pka_A            1 IIGGRECEKNSHPWQVAIYH----YSSFQCGGVLVNPKWVLTAAHCKND   45 (80)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCceEEEEEEEcCCEEEECHHHCCC
Confidence            68999999999999999963    2568999999999999999999965

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=99.27  E-value=2.3e-12  Score=130.62  Aligned_cols=58  Identities=31%  Similarity=0.668  Sum_probs=44.6

Q ss_pred             cccCCCcceeCCcccCCCcccceEEEeeeec-ccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        555 RILFPSSRIVGGEKATFGKWPWQISLRQWIR-STYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       555 ~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~-~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      +...|..||+||++|..++||||+.|....+ ....++|||+||+++||||||||+.+.
T Consensus        16 ~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHCv~~~   74 (276)
T 2vnt_A           16 KTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDY   74 (276)
T ss_dssp             CCC-----CCSSEECCGGGSTTEEEEEEECSSSCEEEEEEEEEEETTEEEECGGGTTTC
T ss_pred             cCCCCCCcEECCEECCCCCCCcEEEEEEecCCCcceeEEEEEEeeCCEEEECcccccCC
Confidence            4556788999999999999999999975332 334579999999999999999998764

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=99.18  E-value=6.2e-11  Score=124.62  Aligned_cols=101  Identities=15%  Similarity=0.192  Sum_probs=69.4

Q ss_pred             cceEEEEEEEecCCceeeeeEEEeeC-cceeeecccccCCC-------CCceEEEEccccCCCCCCCCCcEEEEEEEEEE
Q psy12777        402 WPWQISLRQWIRSTYLHKCGAALFNE-NWAVTAAHCVEDVP-------PSDLLLRLGEHDLSTEEEPYGYQERRVQIVAS  473 (697)
Q Consensus       402 wPW~VsL~~~~~~~~~~~CGGTLIS~-rwVLTAAHC~~~~~-------~~~l~V~LG~~dl~~~~~~~~~q~~~V~~Iii  473 (697)
                      .|++|.|..... ...+.|+|+||++ .||||||||+.+..       ...+.|+++..           +.+... ++ 
T Consensus        16 ~~svV~I~~~~~-~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g-----------~~~~a~-vv-   81 (324)
T 1y8t_A           16 VPSVVMLETDLG-RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDG-----------RTAPFT-VV-   81 (324)
T ss_dssp             GGGEEEEEEEC-----CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTC-----------CEECEE-EE-
T ss_pred             cCcEEEEEEEcc-CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCC-----------CEEEEE-EE-
Confidence            699999975322 2457899999997 69999999997632       23677877621           122232 22 


Q ss_pred             CCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        474 HPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       474 HP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                      +  |+   ..+|||||||+.+    ..+.|++|+.......|+.++++||..
T Consensus        82 ~--~d---~~~DlAllkl~~~----~~~~~~~l~~~~~~~~G~~v~~~G~p~  124 (324)
T 1y8t_A           82 G--AD---PTSDIAVVRVQGV----SGLTPISLGSSSDLRVGQPVLAIGSPL  124 (324)
T ss_dssp             E--CC---TTTTEEEEEECSC----CSCCCCEECCSTTCCTTCEEEEEECGG
T ss_pred             E--eC---CCCCEEEEEECCC----CCCceEEecCcccCCCCCEEEEEEcCC
Confidence            1  22   3689999999876    457899998654434699999999954

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...

Probab=99.16  E-value=1.7e-11  Score=112.37  Aligned_cols=46  Identities=59%  Similarity=1.096  Sum_probs=41.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|..   ..+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~---~~~~~~CgGsLIs~~~VLTAAHC~~~   46 (131)
T 1yph_C            1 IVNGEEAVPGSWPWQVSLQD---KTGFHFCGGSLINENWVVTAAHCGVT   46 (131)
T ss_dssp             CBTCEECCTTSSTTEEEEEC---TTSCEEEEEEEEETTEEEECGGGCCC
T ss_pred             CCCCEECCCCCcCcEEEEEe---CCCCEEEEEEEeeCCEEEECHHHCCC
Confidence            78999999999999999963   24568999999999999999999865

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=99.13  E-value=3.1e-10  Score=114.27  Aligned_cols=85  Identities=15%  Similarity=0.121  Sum_probs=62.0

Q ss_pred             eeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        418 HKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       418 ~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      ..+.|+||+++ ||||||||+.+  ...+.|+++.           ...+....+..++.       +|||||||+.+. 
T Consensus        63 ~~GSG~iI~~~G~VLTaaHvv~~--~~~i~V~~~~-----------g~~~~a~v~~~d~~-------~DlAlL~l~~~~-  121 (231)
T 3tjo_A           63 ASGSGFIVSEDGLIVTNAHVVTN--KHRVKVELKN-----------GATYEAKIKDVDEK-------ADIALIKIDHQG-  121 (231)
T ss_dssp             EEEEEEECSTTCEEEEETTTCCS--SSEEEEECTT-----------SCEEEEEEEEEETT-------TTEEEEECCCSS-
T ss_pred             ceEEEEEEeCCCEEEEchhcccC--CceEEEEcCC-----------CCEEEEEEEEecCC-------CCEEEEEecCCC-
Confidence            57999999998 99999999975  4456666532           13344444555553       699999998763 


Q ss_pred             cCCCeeeeecCCCCCCCCCCEEEEEecccc
Q psy12777        497 FQPNIIPICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       497 fs~~V~PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                         .+.+++|+.......|+.++++||+..
T Consensus       122 ---~~~~~~l~~~~~~~~G~~v~~~G~p~g  148 (231)
T 3tjo_A          122 ---KLPVLLLGRSSELRPGEFVVAIGSPFS  148 (231)
T ss_dssp             ---CCCCCCBCCGGGCCTTCEEEEEEEEET
T ss_pred             ---CCCceecCCcCCCCCCCEEEEEECCCC
Confidence               456788876544446999999999764

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=99.11  E-value=6.2e-11  Score=119.37  Aligned_cols=52  Identities=48%  Similarity=0.926  Sum_probs=46.2

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      +.||+||++|.+++||||+.|+........++|||+||+++||||||||+.+
T Consensus        11 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~   62 (251)
T 1pyt_D           11 SARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISN   62 (251)
T ss_dssp             SSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT
T ss_pred             CCccCCCEECCCCCCCceEEEEEEcCCCcceEEEeEEecCCEEEECHHHhCC
Confidence            5799999999999999999997554445678999999999999999999975

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=99.09  E-value=1.1e-10  Score=118.62  Aligned_cols=87  Identities=13%  Similarity=0.133  Sum_probs=62.7

Q ss_pred             eeeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccc
Q psy12777        417 LHKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV  495 (697)
Q Consensus       417 ~~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV  495 (697)
                      .+.|+|.||+++ ||||||||+.+  ...+.|+++..           +.+.++.+.    |   ...+|||||||+.++
T Consensus        55 ~~~gsG~iI~~~g~ILTnaHvv~~--~~~i~V~~~~g-----------~~~~a~vv~----~---d~~~DlAllkl~~~~  114 (239)
T 1l1j_A           55 ASLGSGFIFDPEGYILTNYHVVGG--ADNITVTMLDG-----------SKYDAEYIG----G---DEELDIAVIKIKASD  114 (239)
T ss_dssp             EEEEEEEEEETTTEEEEEHHHHSS--CSSCEEECTTS-----------CEEEBCCCE----E---ETTTTEEEEEBCCSS
T ss_pred             CceEEEEEEeCCCEEEEChHHhCC--CCEEEEEECCC-----------CEEEEEEEE----E---cCCCCEEEEEEcCCC
Confidence            567999999986 99999999975  35677877621           122222111    1   135799999999875


Q ss_pred             ccCCCeeeeecCCCCCCCCCCEEEEEecccc
Q psy12777        496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       496 ~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                         ..+.+++|+.......|+.++++||+..
T Consensus       115 ---~~~~~~~l~~s~~~~~G~~v~~iG~p~g  142 (239)
T 1l1j_A          115 ---KKFPYLEFGDSDKVKIGEWAIAIGNPLG  142 (239)
T ss_dssp             ---SCCCCCEECCGGGCCTTCEEEEEECTTS
T ss_pred             ---CCCceEEecCccCCccccEEEEEECCCC
Confidence               5678999986543336999999999764

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=99.07  E-value=8.2e-11  Score=120.04  Aligned_cols=52  Identities=31%  Similarity=0.622  Sum_probs=44.4

Q ss_pred             CcceeCCcccCCCcccceEEEeeeeccc-ceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRST-YLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~-~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||++|++|.+++||||+.|......+ ..++|||+||+++||||||||+.+
T Consensus        20 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~   72 (278)
T 2olg_A           20 ADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAG   72 (278)
T ss_dssp             CCCSCCSSBCCTTSSTTEEEEEEECTTCCEEEEEEEEECSSSEEEECGGGTST
T ss_pred             CCceECCEECCCCCCCceEEEEEecCCCCcceeEEEEEEeCCEEEEhHHhCCC
Confidence            5799999999999999999997432222 367999999999999999999875

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=99.06  E-value=9.6e-11  Score=116.85  Aligned_cols=47  Identities=32%  Similarity=0.643  Sum_probs=42.4

Q ss_pred             cceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       561 ~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      .||+||+++.+++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 ~rIvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~   47 (240)
T 1mza_A            1 MEIIGGKEVSPHSRPFMASIQY----GGHHVCGGVLIDPQWVLTAAHCQYR   47 (240)
T ss_dssp             CCCCCCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGSCT
T ss_pred             CceECCEECCCCCCCeEEEEee----CCceEEEEEEecCCEEEECHHhCCC
Confidence            4899999999999999999973    3578999999999999999999863

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=99.05  E-value=6e-11  Score=126.62  Aligned_cols=48  Identities=33%  Similarity=0.593  Sum_probs=41.3

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||+||++|.+++||||+.|..    .+.++|||+||+++||||||||+..
T Consensus       100 ~~RIvGG~~a~~g~~Pw~v~l~~----~~~~~CGGsLIs~~~VLTAAHCv~~  147 (347)
T 4f4o_C          100 VQRIMGGSLDAKGSFPWQAKMIS----HHNLTSGATLINEQWLLTTAKNLRL  147 (347)
T ss_dssp             ---CCSCCBCCSCCCTTCEEEEC----TTCCEEECCBCSSSEEEECHHHHTT
T ss_pred             CCeEECCEECCCCCCCcEEEEEe----CCCEEEEEEEEcCCEEEeCcccccC
Confidence            68999999999999999999963    4568999999999999999999863

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=99.05  E-value=1.1e-10  Score=117.25  Aligned_cols=49  Identities=47%  Similarity=0.963  Sum_probs=43.7

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||+||+++.+++||||+.|+.   +.+.++|||+||+++||||||||+.+
T Consensus        15 ~~rIvgG~~a~~~~~Pw~v~l~~---~~~~~~CgGsLIs~~~VLTAAHC~~~   63 (247)
T 1ddj_A           15 PGRVVGGCVAHPHSWPWQVSLRT---RFGMHFCGGTLISPEWVLTAAHCLEK   63 (247)
T ss_dssp             CTTCTTCEECCTTSSTTEEEEEC---TTSCEEEEEEEEETTEEEECGGGGTT
T ss_pred             CCCcCCCEECCCCCCCcEEEEEc---CCCCeEEEEEEeeCCEEEEcHHHcCC
Confidence            46999999999999999999963   23568999999999999999999975

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=99.04  E-value=1.2e-10  Score=115.42  Aligned_cols=49  Identities=37%  Similarity=0.706  Sum_probs=43.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||.+|..++||||+.|+......+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~   49 (230)
T 2hlc_A            1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD   49 (230)
T ss_dssp             CBTCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTT
T ss_pred             CCCCeECCCCCCCcEEEEEEEecCCCCEEEEEEEeeCCEEEECHHHCCC
Confidence            7899999999999999998654456778999999999999999999975

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=99.04  E-value=1.2e-10  Score=119.95  Aligned_cols=49  Identities=43%  Similarity=0.817  Sum_probs=41.5

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      +.||++|++|..++||||+.|..  +..+.++|||+||+++||||||||+.
T Consensus        28 ~~rIvgG~~a~~~~~Pw~v~l~~--~~~~~~~CgGsLIs~~~VLTAAHC~~   76 (289)
T 2bdy_A           28 DGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLL   76 (289)
T ss_dssp             ---CBSCEECCTTSCTTEEEEEE--TTTTEEEEEEEECSSSEEEECGGGTE
T ss_pred             CCeEECCEECCCCCCCCeEEEEE--CCCCCEEEEEEEecCCEEEEcHHhcc
Confidence            57999999999999999999963  33457899999999999999999985

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=99.03  E-value=1.7e-10  Score=113.74  Aligned_cols=49  Identities=29%  Similarity=0.473  Sum_probs=43.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|......+..++|+|+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~~   49 (226)
T 4ag1_A            1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGR   49 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEEECSSSSCEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCcEEEEEEEcCCCcccEEEEEEEeCCEEEECcccCCC
Confidence            7899999999999999998655555578999999999999999999864

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=99.02  E-value=1.7e-10  Score=114.47  Aligned_cols=49  Identities=33%  Similarity=0.693  Sum_probs=42.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccc-eeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTY-LHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~-~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|......+. .++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~   50 (247)
T 3mhw_U            1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFID   50 (247)
T ss_dssp             CBSSEECCGGGSTTEEEEEEECTTSCEEEEEEEEEEETTEEEECGGGTTT
T ss_pred             CCCCEECCCCCCCCEEEEEEecCCCccceEEEEEEEeCCEEEEcHHhCcC
Confidence            78999999999999999975333333 68999999999999999999865

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=99.02  E-value=1.9e-10  Score=113.15  Aligned_cols=49  Identities=24%  Similarity=0.407  Sum_probs=43.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|......+..++|||+||+++||||||||+..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~   49 (227)
T 3fzz_A            1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKGR   49 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEECSSSCEEEEEEEEEETTEEEECTTCCCE
T ss_pred             CCCCEECCCCCcCCEEEEEEEeCCCceeEEEEEEEeCCEEEECcccCCC
Confidence            7899999999999999998654455588999999999999999999854

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=99.01  E-value=3.1e-09  Score=112.25  Aligned_cols=86  Identities=15%  Similarity=0.133  Sum_probs=62.4

Q ss_pred             eeeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccc
Q psy12777        417 LHKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV  495 (697)
Q Consensus       417 ~~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV  495 (697)
                      ...+.|+||+++ ||||||||+.+  ...+.|.++.           ...+....+..|+.       +|||||||+.+ 
T Consensus        45 ~~~GSG~iI~~~G~ILTaaHvv~~--~~~i~V~~~~-----------g~~~~a~~~~~d~~-------~DlAlL~l~~~-  103 (332)
T 3num_A           45 VASGSGFIVSEDGLIVTNAHVVTN--KHRVKVELKN-----------GATYEAKIKDVDEK-------ADIALIKIDHQ-  103 (332)
T ss_dssp             EEEEEEEEEETTTEEEECTTTCCT--TSEEEEEETT-----------SCEEEEEEEEEETT-------TTEEEEEECCS-
T ss_pred             eeeEEEEEEeCCCEEEEChHHcCC--CCEEEEEECC-----------CCEEEEEEEEecCC-------CCeEEEEEcCC-
Confidence            356999999998 99999999975  4567777642           13455666667765       59999999876 


Q ss_pred             ccCCCeeeeecCCCCCCCCCCEEEEEecccc
Q psy12777        496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       496 ~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                         ..+.+++|+.......|+.++++||+..
T Consensus       104 ---~~~~~~~l~~~~~~~~G~~v~~~G~p~g  131 (332)
T 3num_A          104 ---GKLPVLLLGRSSELRPGEFVVAIGSPFS  131 (332)
T ss_dssp             ---SCCCCCCBCCTTSCCTTCEEEEECC---
T ss_pred             ---CCCceeeecCcccCCCCCEEEEEECCCC
Confidence               3466788876544446999999999864

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=99.01  E-value=2.3e-10  Score=113.57  Aligned_cols=48  Identities=35%  Similarity=0.552  Sum_probs=41.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|... ..+..++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~~~~~CgGsLI~~~~VLTAAHC~~~   48 (227)
T 1euf_A            1 IIGGHEAKPHSRPYMAFLLFK-TSGKSHICGGFLVREDFVLTAAHCLGS   48 (227)
T ss_dssp             CBSCEECCTTSCTTEEEEEEE-SSSSEEEEEEEEEETTEEEECGGGCCE
T ss_pred             CCCCeECCCCCcCCEEEEEEe-CCCCceEEEEEEeeCCEEEECHHHCCC
Confidence            789999999999999999642 334478999999999999999999864

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=99.01  E-value=2.4e-10  Score=113.25  Aligned_cols=48  Identities=33%  Similarity=0.692  Sum_probs=41.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|.+++||||+.|... ..+..++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~~~~~CgGtLI~~~~VLTAAHC~~~   48 (227)
T 1iau_A            1 IIGGHEAKPHSRPYMAYLMIW-DQKSLKRCGGFLIRDDFVLTAAHCWGS   48 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEE-CSSCEEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCeECCCCCcCcEEEEEEE-CCCCceEEEEEEEcCCEEEECHHhCCC
Confidence            789999999999999999643 233368999999999999999999864

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=99.00  E-value=7.7e-10  Score=116.77  Aligned_cols=87  Identities=18%  Similarity=0.130  Sum_probs=61.3

Q ss_pred             eeeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccc
Q psy12777        417 LHKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV  495 (697)
Q Consensus       417 ~~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV  495 (697)
                      ...|+|.||+++ ||||||||+.+  ...+.|+++..           +.+...-+.    |+   ..+|||||||+.+.
T Consensus        46 ~~~gsG~iI~~~G~IlT~aHvv~~--~~~i~V~~~~g-----------~~~~a~v~~----~d---~~~DlAllkl~~~~  105 (325)
T 1lcy_A           46 ISNGSGFVVAADGLIVTNAHVVAD--RRRVRVRLLSG-----------DTYEAVVTA----VD---PVADIATLRIQTKE  105 (325)
T ss_dssp             EEEEEEEEEETTTEEEECHHHHTT--CSEEEEECTTS-----------CEEEEEEEE----EE---TTTTEEEEECCCSS
T ss_pred             cccEEEEEEeCCCEEEECHHHcCC--CCEEEEEeCCC-----------CEEEEEEEE----EC---CCCCEEEEEEcCCC
Confidence            467999999998 99999999976  34677776521           223332221    22   35799999998653


Q ss_pred             ccCCCeeeeecCCCCCCCCCCEEEEEeccccC
Q psy12777        496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGRLY  527 (697)
Q Consensus       496 ~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~  527 (697)
                          .+.+++|+.......|+.++++||+...
T Consensus       106 ----~~~~~~l~~~~~~~~G~~v~~~G~p~~~  133 (325)
T 1lcy_A          106 ----PLPTLPLGRSADVRQGEFVVAMGSPFAL  133 (325)
T ss_dssp             ----CCCCCCBCCGGGCCTTCEEEECCCTTSS
T ss_pred             ----CCceEEecccccCCCCCEEEEEECCCCC
Confidence                4678888865433369999999998743

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=99.00  E-value=2.3e-10  Score=112.34  Aligned_cols=49  Identities=27%  Similarity=0.447  Sum_probs=43.1

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||.++.+++||||+.|......+..++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~~   49 (224)
T 3rp2_A            1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGR   49 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCcEEEEEeEEeeCCEEEEchhcCCC
Confidence            7899999999999999998644444578999999999999999999864

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=99.00  E-value=2.4e-10  Score=114.10  Aligned_cols=49  Identities=47%  Similarity=0.928  Sum_probs=41.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|.+++||||+.|+........++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~   49 (240)
T 1gvk_B            1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR   49 (240)
T ss_dssp             CBTCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCS
T ss_pred             CCCCeECCCCCcCEEEEEEecCCCccCceEEEEEeeCCEEEECHHHCCC
Confidence            7899999999999999997311111158999999999999999999975

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=99.00  E-value=2.5e-10  Score=113.89  Aligned_cols=49  Identities=41%  Similarity=0.936  Sum_probs=42.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++||||+.|+.. ...+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~~~~~CgGtLI~~~~VLTAAHC~~~~   49 (238)
T 3bg8_A            1 IVGGTASVRGEWPWQVTLHTT-SPTQRHLCGGSIIGNQWILTAAHCFYGV   49 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEEC-SSSCEEEEEEEEEETTEEEECGGGGTTC
T ss_pred             CCCCeECCCCCcCcEEEEEee-cCCCcEEEEEEEeeCCEEEECHHHCCCC
Confidence            789999999999999999742 2346789999999999999999998653

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=98.99  E-value=2.7e-10  Score=113.67  Aligned_cols=49  Identities=45%  Similarity=1.047  Sum_probs=42.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++..++||||+.|+.. ...+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~~~~~CgGtLI~~~~VLTAAHC~~~~   49 (241)
T 2any_A            1 IVGGTESSWGEWPWQVSLQVK-LTAQRHLCGGSLIGHQWVLTAAHCFDGL   49 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEE-SSSEEEEEEEEEEETTEEEECGGGGSSC
T ss_pred             CCCCEECCCCCCCcEEEEEEE-cCCCceEEEEEEecCCEEEECHHHcCCC
Confidence            789999999999999999742 2356789999999999999999998753

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=98.99  E-value=2.3e-10  Score=113.92  Aligned_cols=45  Identities=36%  Similarity=0.736  Sum_probs=40.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|.+++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~~   45 (237)
T 2zch_P            1 IVGGWECEKHSQPWQVLVAS----RGRAVCGGVLVHPQWVLTAAHCIRN   45 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEES----SSSEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCCEEEEee----CCCeEEEEEEecCCEEEEcHHhcCC
Confidence            78999999999999999963    3568999999999999999999875

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=98.99  E-value=4.4e-11  Score=115.39  Aligned_cols=80  Identities=19%  Similarity=0.294  Sum_probs=57.7

Q ss_pred             eeee-EEEee---CcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCc
Q psy12777        418 HKCG-AALFN---ENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYE  493 (697)
Q Consensus       418 ~~CG-GTLIS---~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~  493 (697)
                      ..|+ |.||+   ++||||||||+...    ..+++|.++               .     +.|    ..+|||||||++
T Consensus        12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~----~~~~~G~~~---------------~-----~~~----~~~DiAlikl~~   63 (181)
T 2sga_A           12 SRCSLGFNVSVNGVAHALTAGHCTNIS----ASWSIGTRT---------------G-----TSF----PNNDYGIIRHSN   63 (181)
T ss_dssp             EEEECCEEEEETTEEEEEECHHHHTTC----SEETTEEEE---------------E-----EEC----SBSCEEEEEESC
T ss_pred             CcEeccEEEEECCceEEEECcccCCCC----Cceeeccee---------------C-----CcC----CCCCEEEEEccC
Confidence            4699 99998   68999999998642    234444321               0     112    247999999999


Q ss_pred             ccccCCCeeee----ecCCC-CCCCCCCEEEEEeccc
Q psy12777        494 PVKFQPNIIPI----CVPED-DTNFVGTSAHVTGWGR  525 (697)
Q Consensus       494 PV~fs~~V~PI----CLP~~-~~~~~G~~c~VtGWG~  525 (697)
                      ++.+++.|+++    +++.. .....|+.|.+.||+.
T Consensus        64 ~~~~~~~v~~i~~~~~~~~~~~~~~~G~~v~~~G~~~  100 (181)
T 2sga_A           64 PAAADGRVYLYNGSYQDITTAGNAFVGQAVQRSGSTT  100 (181)
T ss_dssp             GGGCCCEEECSSSCEEECCEECCCCTTCEEEEEETTT
T ss_pred             CCcccceEEecCCcceeecccccCCCCCEEEEeecCC
Confidence            99988899998    77753 2233699999988864

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=98.99  E-value=2.9e-10  Score=113.83  Aligned_cols=49  Identities=43%  Similarity=0.982  Sum_probs=41.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|.+++||||+.|.........++|||+||+++||||||||+..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~   49 (241)
T 1bru_P            1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS   49 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCT
T ss_pred             CCCCeECCCCCcCcEEEEEEecCCceeeEEEeEEeeCCEEEEcHHhccc
Confidence            7899999999999999997532222258999999999999999999873

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=98.99  E-value=2.9e-10  Score=113.04  Aligned_cols=45  Identities=40%  Similarity=0.804  Sum_probs=40.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~~   45 (238)
T 1spj_A            1 IVGGWECEQHSQPWQAALYH----FSTFQCGGILVHRQWVLTAAHCISD   45 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCcEEEEEe----CCCeeEEEEEecCCEEEEcHHhCCC
Confidence            78999999999999999964    2468999999999999999999864

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=98.99  E-value=2.7e-10  Score=114.51  Aligned_cols=49  Identities=59%  Similarity=1.062  Sum_probs=41.4

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||++|++|.+++||||+.|+.   ..+.++|||+||+++||||||||+.+
T Consensus        13 ~~rIvgG~~a~~~~~Pw~v~l~~---~~~~~~CgGtLI~~~~VLTAAHC~~~   61 (245)
T 1t8o_A           13 LSRIVNGEEAVPGSWPWQVSLQD---KTGFHFCGGSLINENWVVTAAHCGVT   61 (245)
T ss_dssp             ---CBTCEECCTTSSTTEEEEEC---TTCCEEEEEEEEETTEEEECGGGCCC
T ss_pred             CCceECCEECCCCCCCceEEEEc---CCCCeEEEEEEeeCCEEEEcHHhCcC
Confidence            36899999999999999999963   23568999999999999999999865

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=98.98  E-value=3.3e-10  Score=117.15  Aligned_cols=49  Identities=43%  Similarity=1.011  Sum_probs=42.1

Q ss_pred             eeCCcccCCCcccceEEEeeee--cccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWI--RSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~--~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|..++||||+.|+...  +....++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~   51 (290)
T 1fiw_A            1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRI   51 (290)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEECGGGGSS
T ss_pred             CCCCEECCCCCCCcEEEEEEeccCCCccceEEEEEEeeCCEEEECHHhCCC
Confidence            7899999999999999997532  223468999999999999999999864

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=98.98  E-value=3.3e-10  Score=112.94  Aligned_cols=49  Identities=47%  Similarity=0.911  Sum_probs=40.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|..++||||+.|+.....+..++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~   49 (237)
T 2f91_A            1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYG   49 (237)
T ss_dssp             CBSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTT
T ss_pred             CCCccCCCCCCCCcEEEEEEecCCCCcceEEEEEeeCCEEEEcHHhCCC
Confidence            7899999999999999997532222234699999999999999999865

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=98.98  E-value=3.5e-10  Score=113.15  Aligned_cols=48  Identities=50%  Similarity=1.055  Sum_probs=41.4

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|..++||||+.|+.. .....++|||+||+++||||||||+..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~~~~~CgGtLIs~~~VLTAAHC~~~   48 (245)
T 2f9n_A            1 IVGGQEAPRSKWPWQVSLRVR-DRYWMHFCGGSLIHPQWVLTAAHCVGP   48 (245)
T ss_dssp             CBSCEECCTTSCTTEEEEEEE-SSSEEEEEEEEEEETTEEEECGGGGCS
T ss_pred             CCCCeECCCCCCCcEEEEEEc-CCCcceEEEEEEeeCCEEEECHHhCCC
Confidence            789999999999999999742 223468999999999999999999953

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=98.98  E-value=2.8e-10  Score=116.72  Aligned_cols=48  Identities=31%  Similarity=0.643  Sum_probs=41.1

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ..||+||+++.+++||||+.|..     +.++|||+||+++||||||||+.+.
T Consensus        33 ~~rIvgG~~a~~~~~Pw~v~l~~-----~~~~CgGsLIs~~~VLTAAHC~~~~   80 (283)
T 1yc0_A           33 RPRIIGGSSSLPGSHPWLAAIYI-----GDSFCAGSLVHTCWVVSAAHCFSHS   80 (283)
T ss_dssp             ---CBSCEECCTTSSTTEEEEEE-----TTEEEEEEEEETTEEEECGGGGTTC
T ss_pred             cCceECCeECCCCCCCeEEEEEc-----CCcEEEEEEeeCCEEEECHHHcCCC
Confidence            46999999999999999999964     2589999999999999999999753

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=98.98  E-value=4.6e-10  Score=122.36  Aligned_cols=53  Identities=34%  Similarity=0.594  Sum_probs=45.2

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      +.||+||+++..++||||+.|.........++|||+||+++||||||||+.+.
T Consensus       116 ~~rIvgG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~~~  168 (408)
T 2xxl_A          116 SQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGL  168 (408)
T ss_dssp             CCCCCSSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTTTC
T ss_pred             CCceECCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcCCC
Confidence            57999999999999999999974323224689999999999999999999753

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=98.98  E-value=2.3e-10  Score=113.21  Aligned_cols=46  Identities=52%  Similarity=0.987  Sum_probs=41.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||.+|.+++||||+.|+.    .+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~   46 (222)
T 1eq9_A            1 IVGGKDAPVGKYPYQVSLRL----SGSHRCGASILDNNNVLTAAHCVDGL   46 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEECSSSEEEECHHHHTTC
T ss_pred             CCCCEECCCCCcceEEEEEe----CCCeEEEEEEeeCCEEEEhhhcCCCC
Confidence            78999999999999999963    34689999999999999999998763

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=98.97  E-value=2.9e-10  Score=112.54  Aligned_cols=48  Identities=29%  Similarity=0.533  Sum_probs=41.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|... ..++.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~~~~~CgGsLI~~~~VLTAAHC~~~   48 (224)
T 1cgh_A            1 IIGGRESRPHSRPYMAYLQIQ-SPAGQSRCGGFLVREDFVLTAAHCWGS   48 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEES-TTTTSCEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCcEEEEEEE-CCCCCeEEEEEEeeCCEEEEhHHhCCC
Confidence            789999999999999999742 223468999999999999999999875

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=98.97  E-value=9.5e-10  Score=117.12  Aligned_cols=87  Identities=22%  Similarity=0.263  Sum_probs=63.7

Q ss_pred             eeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        418 HKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       418 ~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      ..|.|+||+++ ||||||||+.+  ...+.|.++.           .+.+....+..++.       +|||||||+.+. 
T Consensus        53 g~GSG~iI~~~G~IlT~aHvv~~--~~~i~V~~~~-----------g~~~~a~~v~~d~~-------~DlAlLkl~~~~-  111 (348)
T 3qo6_A           53 GSGSGFVWDKQGHIVTNYHVIRG--ASDLRVTLAD-----------QTTFDAKVVGFDQD-------KDVAVLRIDAPK-  111 (348)
T ss_dssp             EEEEEEEEETTTEEEECHHHHTT--CSEEEEECTT-----------SCEEEEEEEEEEGG-------GTEEEEECCCCG-
T ss_pred             ceEEEEEEeCCCEEEECHHHhCC--CcEEEEEECC-----------CCEEEEEEEEEcCc-------CCEEEEEEcCCC-
Confidence            46999999998 99999999975  4456676532           12334444444543       599999998762 


Q ss_pred             cCCCeeeeecCCCCCCCCCCEEEEEeccccC
Q psy12777        497 FQPNIIPICVPEDDTNFVGTSAHVTGWGRLY  527 (697)
Q Consensus       497 fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~  527 (697)
                        ..+.|++|+.......|+.++++||+...
T Consensus       112 --~~~~~i~l~~s~~~~~G~~v~~iG~p~g~  140 (348)
T 3qo6_A          112 --NKLRPIPVGVSADLLVGQKVFAIGNPFGL  140 (348)
T ss_dssp             --GGCCCCCBCCSTTCCTTCEEEEEECGGGC
T ss_pred             --CCceeEEecCcccCCCCCEEEEEECCCCC
Confidence              46789999876554479999999998653

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=98.97  E-value=2e-10  Score=114.70  Aligned_cols=47  Identities=30%  Similarity=0.655  Sum_probs=31.8

Q ss_pred             cceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       561 ~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      .||++|+++..++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         2 arIvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~~   48 (240)
T 1sgf_A            2 APPVQSQVDCENSQPWHVAVYR----FNKYQCGGVLLDRNWVLTAAHCYND   48 (240)
T ss_dssp             -----------CCCTTEEEEEC----TTSCCEEEEECSSSEEEECGGGCCS
T ss_pred             CcccCCeECCCCCcCCEEEEEe----CCCeEEEEEEecCCEEEECHHhCCC
Confidence            5899999999999999999941    3568999999999999999999864

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=98.97  E-value=3.7e-10  Score=111.02  Aligned_cols=49  Identities=37%  Similarity=0.649  Sum_probs=42.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||.++.+++||||+.|... ..++.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~~~~~CgGtLIs~~~VLTAAHC~~~~   49 (221)
T 1fuj_A            1 IVGGHEAQPHSRPYMASLQMR-GNPGSHFCGGTLIHPSFVLTAAHCLRDI   49 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEET-TBTTCCCEEEEEEETTEEEECGGGGSSS
T ss_pred             CCCCEECCCCCcCCEEEEEEe-cCCCCEEEEEEEecCCEEEEchHhcCcC
Confidence            789999999999999999742 2335789999999999999999999764

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=98.97  E-value=3.3e-10  Score=112.26  Aligned_cols=46  Identities=52%  Similarity=1.023  Sum_probs=41.1

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|+.   .+..++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~---~~~~~~CgGtLI~~~~VLTAAhC~~~   46 (241)
T 3ncl_A            1 VVGGTDADEGEWPWQVSLHA---LGQGHICGASLISPNWLVSAAHCYID   46 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEE---TTTEEEEEEEECSSSEEEECGGGGCC
T ss_pred             CCCCeECCCCCCCcEEEEEc---CCCceEEEEEEeeCCEEEEcHHhccc
Confidence            78999999999999999963   34568999999999999999999864

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=98.97  E-value=2.9e-10  Score=113.11  Aligned_cols=49  Identities=49%  Similarity=1.032  Sum_probs=41.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|+...+....++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~   49 (236)
T 1elt_A            1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS   49 (236)
T ss_dssp             CBSSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSS
T ss_pred             CCCCEECCCCCCCCEEEEEEecCCceeeEEEEEEEeCCEEEECHHhhCC
Confidence            7899999999999999997533222248999999999999999999975

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=98.97  E-value=3.4e-10  Score=113.84  Aligned_cols=46  Identities=41%  Similarity=0.848  Sum_probs=41.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|..++||||+.|..    .+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~   46 (254)
T 2bz6_H            1 IVGGKVCPKGECPWQVLLLV----NGAQLCGGTLINTIWVVSAAHCFDKI   46 (254)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEECSSSEEEECGGGGTTC
T ss_pred             CCCCEECCCCCcCCEEEEEe----CCCcEEEEEEecCCEEEECHHHcCCC
Confidence            78999999999999999973    35789999999999999999998753

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=98.97  E-value=3.3e-10  Score=112.24  Aligned_cols=45  Identities=31%  Similarity=0.671  Sum_probs=40.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~~   45 (223)
T 2bdg_A            1 IINGEDCSPHSQPWQAALVM----ENELFCSGVLVHPQWVLSAAHCFQN   45 (223)
T ss_dssp             CBTCEECCTTSSTTEEEEEC----SSCEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCcEEEEee----CCCEEEEEEEecCCEEEEhHHhCCC
Confidence            78999999999999999974    3468999999999999999999865

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=98.97  E-value=2.6e-10  Score=113.25  Aligned_cols=45  Identities=40%  Similarity=0.791  Sum_probs=41.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|.+++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~   45 (226)
T 1azz_A            1 IVGGVEAVPNSWPHQAALFI----DDMYFCGGSLISPEWILTAAHCMDG   45 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTTEEEEEEEEETTEEEECHHHHTT
T ss_pred             CCCCEECCCCCcCCEEEEEE----CCcEEEEEEEecCCEEEEhHHhcCC
Confidence            78999999999999999974    3568999999999999999999975

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=98.96  E-value=2.8e-10  Score=111.90  Aligned_cols=45  Identities=33%  Similarity=0.744  Sum_probs=40.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~   45 (235)
T 3h7t_A            1 IIGGKKSDITKEPWAVGVLV----DEKPFCGGSILTANFVITAAQCVDG   45 (235)
T ss_dssp             CBTCEECCTTTSTTEEEEEE----TTSCCEEEEESSSSEEEECHHHHTT
T ss_pred             CCCCEECCCCCCCcEEEEec----CCCceEeEEEeeCCEEEECHHHCCC
Confidence            78999999999999999974    2578999999999999999999964

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=98.96  E-value=4.1e-09  Score=106.19  Aligned_cols=86  Identities=15%  Similarity=0.230  Sum_probs=62.3

Q ss_pred             eeeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccc
Q psy12777        417 LHKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV  495 (697)
Q Consensus       417 ~~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV  495 (697)
                      ...+.|.||+++ ||||||||+.+  ...+.|.++.           ...+....+..|+.       +|||||||+.+.
T Consensus        52 ~~~GsG~ii~~~G~IlTaaHvv~~--~~~~~V~~~~-----------g~~~~a~vv~~d~~-------~DlAll~l~~~~  111 (237)
T 3lgi_A           52 RTLGSGVIMDQRGYIITNKHVIND--ADQIIVALQD-----------GRVFEALLVGSDSL-------TDLAVLKINATG  111 (237)
T ss_dssp             EEEEEEEEEETTTEEEEEHHHHTT--CSEEEEECTT-----------SCEEEEEEEEEETT-------TTEEEEECCCSS
T ss_pred             ceEEEEEEEeCCCEEEEeeeecCC--CCEEEEEeCC-----------CCEEEEEEEEEcCC-------CCEEEEEecCCC
Confidence            346999999998 99999999975  3456665431           13344555556654       599999998764


Q ss_pred             ccCCCeeeeecCCCCCCCCCCEEEEEecccc
Q psy12777        496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       496 ~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                          .+.+++|+.......|+.+++.||+..
T Consensus       112 ----~~~~~~l~~~~~~~~G~~v~~~G~p~~  138 (237)
T 3lgi_A          112 ----GLPTIPINARRVPHIGDVVLAIGNPYN  138 (237)
T ss_dssp             ----CCCCCCCCTTCCCCTTBEEEEEECGGG
T ss_pred             ----CCceEeccCcccCCCCCEEEEEECCCC
Confidence                356788876544446999999999764

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=98.96  E-value=4e-10  Score=113.02  Aligned_cols=46  Identities=35%  Similarity=0.709  Sum_probs=41.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++||||+.|+.    .+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~   46 (240)
T 2zgc_A            1 IIGGREVIPHSRPYMASLQR----NGSHLCGGVLVHPKWVLTAAHCLAQR   46 (240)
T ss_dssp             CBTCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGGCSC
T ss_pred             CCCCEECCCCCcCcEEEEEe----CCCeEEEEEEEcCCEEEEcHHhcCCC
Confidence            78999999999999999974    35699999999999999999999764

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=98.96  E-value=4.3e-10  Score=111.60  Aligned_cols=45  Identities=51%  Similarity=1.049  Sum_probs=41.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||.++.+++||||+.|+.    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAhC~~~   45 (232)
T 2oq5_A            1 IVGGTEVEEGEWPWQASLQW----DGSHRCGATLINATWLVSAAHCFTT   45 (232)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGGSS
T ss_pred             CCCCEECCCCCCCeeEEEEe----CCCeeEEEEEEcCCEEEECHHHcCC
Confidence            78999999999999999974    3468999999999999999999975

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=98.96  E-value=5.6e-10  Score=110.28  Aligned_cols=46  Identities=39%  Similarity=0.767  Sum_probs=40.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||.++.+++||||+.|..    .+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~~   46 (228)
T 2xw9_A            1 ILGGREAEAHARPYMASVQL----NGAHLCGGVLVAEQWVLSAAHCLEDA   46 (228)
T ss_dssp             CBCC-CCCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGGSSC
T ss_pred             CCCCeECCCCCCCcEEEEEE----CCCeEEEEEEEeCCEEEEcHHhCCCC
Confidence            78999999999999999974    24789999999999999999999753

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=98.96  E-value=3.7e-10  Score=113.06  Aligned_cols=49  Identities=31%  Similarity=0.604  Sum_probs=41.7

Q ss_pred             eeCCcccCCCcccceEEEeeee--cccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWI--RSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~--~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||.+|..++||||+.|....  ..+..++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~   51 (252)
T 1rtf_B            1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQE   51 (252)
T ss_dssp             CBSSEECCGGGSTTEEEEEEEC----CEEEEEEEEECSSSEEEECGGGGTT
T ss_pred             CCCCeECCCCCcCCEEEEEEecCCCCCCCEEEEEEEEeCCEEEECHHHCCC
Confidence            7899999999999999997422  234578999999999999999999865

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=98.96  E-value=4.2e-10  Score=111.26  Aligned_cols=46  Identities=41%  Similarity=0.720  Sum_probs=41.4

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++||||+.|..    .+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~~   46 (224)
T 1pq7_A            1 IVGGTSASAGDFPFIVSISR----NGGPWCGGSLLNANTVLTAAHCVSGY   46 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECHHHHTTS
T ss_pred             CCCCEECCCCCcCeEEEEEE----CCCeEEEEEEecCCEEEEcHHccCCC
Confidence            78999999999999999973    35789999999999999999999753

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=98.96  E-value=4.3e-10  Score=111.07  Aligned_cols=46  Identities=37%  Similarity=0.662  Sum_probs=39.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++..++||||+.|+.    .+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~~   46 (225)
T 1a7s_A            1 IVGGRKARPRQFPFLASIQN----QGRHFCGGALIHARFVMTAASCFQSQ   46 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGC---
T ss_pred             CCCCEECCCCCCCcEEEEec----CCCcEEEEEEeeCCEEEEchhccCCC
Confidence            78999999999999999974    25789999999999999999999753

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=98.96  E-value=5.6e-10  Score=112.28  Aligned_cols=47  Identities=36%  Similarity=0.791  Sum_probs=41.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|..++||||+.|..   ..+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~---~~~~~~CgGsLI~~~~VLTAAHC~~~~   47 (250)
T 1aut_C            1 LIDGKMTRRGDSPWQVVLLD---SKKKLACGAVLIHPSWVLTAAHCMDES   47 (250)
T ss_dssp             CBSCEECCTTSCTTEEEEEC---TTSCEEEEEEEEETTEEEECGGGSSSC
T ss_pred             CCCCEECCCCCCCCEEEEec---CCCceEEEEEEeeCCEEEEChHHcCCC
Confidence            78999999999999999963   345689999999999999999999753

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=98.95  E-value=4.5e-10  Score=111.81  Aligned_cols=44  Identities=34%  Similarity=0.771  Sum_probs=40.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      |+||++|..++||||+.|+.    .+.++|||+||+++||||||||+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~   44 (237)
T 1gvz_A            1 IIGGWECEKHSKPWQVAVYH----QGHFQCGGVLVHPQWVLTAAHCMS   44 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCC
T ss_pred             CCCCEECCCCCCCeEEEEee----CCceEEEeEEeeCCEEEEcHHhCC
Confidence            78999999999999999963    246899999999999999999985

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=98.95  E-value=4.6e-10  Score=111.19  Aligned_cols=45  Identities=36%  Similarity=0.675  Sum_probs=40.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|..    .+.++|||+||+++||||||||+..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLI~~~~VLTAAHC~~~   45 (225)
T 1npm_A            1 ILEGRECIPHSQPWQAALFQ----GERLICGGVLVGDRWVLTAAHCKKQ   45 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCcCcEEEEee----CCceEEEEEEECCCEEEEhHHcCCC
Confidence            78999999999999999963    3578999999999999999999863

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=98.95  E-value=4.1e-10  Score=112.38  Aligned_cols=47  Identities=36%  Similarity=0.678  Sum_probs=41.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++..++||||+.|+.   ..+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~---~~~~~~CgGtLIs~~~VLTAAhC~~~~   47 (241)
T 2jkh_A            1 IVGGQECKDGECPWQALLIN---EENEGFCGGTILSEFYILTAAHCLYQA   47 (241)
T ss_dssp             CBSSEECCTTSSTTEEEEEC---TTSCEEEEEEECSSSEEEECGGGGGSC
T ss_pred             CCCCEECCCCCcCcEEEEEc---CCCCcEEEEEEeeCCEEEEcHHHcCCC
Confidence            78999999999999999963   245689999999999999999999753

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=98.95  E-value=4.4e-10  Score=112.66  Aligned_cols=45  Identities=44%  Similarity=1.048  Sum_probs=40.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAhC~~~   45 (261)
T 3gyl_B            1 ITGGSSAVAGQWPWQVSITY----EGVHVCGGSLVSEQWVLSAAHCFPS   45 (261)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEECSSSEEEECGGGSCT
T ss_pred             CCCCcCCCCCCCCcEEEEee----CCceEEEEEEEcCCEEEECHHHCCC
Confidence            78999999999999999964    3568999999999999999999953

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=98.95  E-value=3.7e-10  Score=111.16  Aligned_cols=46  Identities=43%  Similarity=0.823  Sum_probs=41.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++.+++||||+.|..    .+.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~~   46 (218)
T 2z7f_E            1 IVGGRRARPHAWPFMVSLQL----RGGHFCGATLIAPNFVMSAAHCVANV   46 (218)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECHHHHTTS
T ss_pred             CCCCEECCCCccCcEEEEEe----CCCcEEEEEEccCCEEEEcHHhcCCC
Confidence            78999999999999999974    25789999999999999999998763

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=98.95  E-value=4.7e-10  Score=111.66  Aligned_cols=45  Identities=40%  Similarity=0.823  Sum_probs=40.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|.+++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~   45 (237)
T 1ao5_A            1 VVGGFNCEKNSQPWQVAVYY----QKEHICGGVLLDRNWVLTAAHCYVD   45 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECTTCCCS
T ss_pred             CCCCeECCCCCcCCEEEEee----CCCeEEEEEEeeCCEEEECHHHCCC
Confidence            78999999999999999974    2568999999999999999999853

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=98.95  E-value=4.4e-10  Score=111.64  Aligned_cols=46  Identities=37%  Similarity=0.697  Sum_probs=41.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|..   ..+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~---~~~~~~CgGtLIs~~~VLTAAHC~~~   46 (251)
T 3gov_B            1 IFNGRPAQKGTTPWIAMLSH---LNGQPFCGGSLLGSSWIVTAAHCLHQ   46 (251)
T ss_dssp             CBTCEECCTTSCTTEEEEEE---TTCCEEEEEEEETTTEEEECGGGGBC
T ss_pred             CCCCEECCCCCcCeEEEEec---cCCCeeEEEEEecCCEEEECHhhccc
Confidence            78999999999999999963   24568999999999999999999965

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=98.95  E-value=4.4e-10  Score=112.15  Aligned_cols=46  Identities=43%  Similarity=0.829  Sum_probs=40.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      |+||++|.+++||||+.|.+  +..+.++|||+||+++||||||||+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~--~~~~~~~CgGtLI~~~~VLTAAHC~~   46 (259)
T 3rm2_H            1 IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLL   46 (259)
T ss_dssp             CBSCEECCTTSSTTEEEEEE--ETTEEEEEEEEECSSSEEEECGGGTE
T ss_pred             CCCCEECCCCCcCCEEEEEE--CCCCceEEEEEEEeCCEEEEcHHhCc
Confidence            78999999999999999953  33456899999999999999999985

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=98.94  E-value=4.3e-10  Score=111.88  Aligned_cols=45  Identities=33%  Similarity=0.645  Sum_probs=40.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~   45 (234)
T 1orf_A            1 IIGGNEVTPHSRPYMVLLSL----DRKTICAGALIAKDWVLTAAHCNLN   45 (234)
T ss_dssp             CBSCEECCTTSSTTEEEEEC----SSSCEEEEEEEETTEEEECTTCCCC
T ss_pred             CCCCEECCCCCCCeEEEEcc----CCceEEEEEEeeCCEEEEchhcCCC
Confidence            78999999999999999963    2468999999999999999999864

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=98.94  E-value=5.5e-10  Score=110.79  Aligned_cols=46  Identities=35%  Similarity=0.697  Sum_probs=41.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|..++||||+.|..   ..+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~---~~~~~~CgGtLIs~~~VLTAAHC~~~   46 (227)
T 2psx_A            1 IINGSDCDMHTQPWQAALLL---RPNQLYCGAVLVHPQWLLTAAHCRKK   46 (227)
T ss_dssp             CBTCEECCTTSCTTEEEEEE---TTTEEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCCEEEEEe---cCCCceEEEEEEcCCEEEEhHHcCCC
Confidence            78999999999999999974   23578999999999999999999864

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=98.94  E-value=5e-10  Score=112.01  Aligned_cols=45  Identities=31%  Similarity=0.650  Sum_probs=40.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++.+++||||+.|+.     ..++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-----~~~~CgGsLIs~~~VLTAAHC~~~~   45 (248)
T 2r0l_A            1 IIGGSSSLPGSHPWLAAIYI-----GDSFCAGSLVHTCWVVSAAHCFSHS   45 (248)
T ss_dssp             CBSCEECCTTSSTTEEEEEE-----TTEEEEEEEEETTEEEECGGGGTTC
T ss_pred             CCCCccCCCCCCCeEEEEEc-----CCceEEEEEEcCCEEEECHHHcCCC
Confidence            78999999999999999974     2589999999999999999999754

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=98.94  E-value=9.8e-09  Score=107.80  Aligned_cols=85  Identities=15%  Similarity=0.221  Sum_probs=59.5

Q ss_pred             eeeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccc
Q psy12777        417 LHKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV  495 (697)
Q Consensus       417 ~~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV  495 (697)
                      .+.|+|.||+++ ||||||||+.+  ...+.|.++..           +.+...-+..+       ..+|||||||+.+ 
T Consensus        41 ~~~gsG~iI~~~G~IlT~aHvv~~--~~~i~V~~~~g-----------~~~~a~v~~~d-------~~~DlAllk~~~~-   99 (318)
T 1te0_A           41 RTLGSGVIMDQRGYIITNKHVIND--ADQIIVALQDG-----------RVFEALLVGSD-------SLTDLAVLIIKAT-   99 (318)
T ss_dssp             EEEEEEEECSTTCEEEEEHHHHTT--CSEEEEECTTS-----------CEEEEEEEEEE-------TTTTEEEEECCCS-
T ss_pred             CccEEEEEEeCCCEEEECHHHcCC--CCEEEEEeCCC-----------CEEEEEEEEeC-------CCceEEEEEEeCC-
Confidence            578999999998 99999999975  34566765421           22223222222       3579999999876 


Q ss_pred             ccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       496 ~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                         ..+.+++|+.......|+.++++||..
T Consensus       100 ---~~~~~~~l~~~~~~~~G~~v~~~G~p~  126 (318)
T 1te0_A          100 ---GGLPTIPINARRVPHIGDVVLAIGNPY  126 (318)
T ss_dssp             ---SCCCCCCCCTTCCCCTTCEEEEECCCS
T ss_pred             ---CCCceEEeeCccCCCCCCEEEEEEcCC
Confidence               356788898654434699999999743

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=98.94  E-value=5e-10  Score=111.52  Aligned_cols=49  Identities=37%  Similarity=0.885  Sum_probs=42.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++||||+.|+.. .....++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~~~~~CgGtLIs~~~VLTAAHC~~~~   49 (241)
T 1m9u_A            1 VIGGTNASPGEFPWQLSQQRQ-SGSWSHSCGASLLSSTSALSASHCVDGV   49 (241)
T ss_dssp             CBTCEECCTTSSTTEEEEEEE-SSSEEEEEEEEECSSSEEEECHHHHTTC
T ss_pred             CCCCeECCCCCcCeEEEEEec-CCceeeeeEEEEEeCCEEEecHHhCCCC
Confidence            789999999999999999753 2223589999999999999999999763

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=98.93  E-value=5e-10  Score=111.15  Aligned_cols=46  Identities=37%  Similarity=0.655  Sum_probs=40.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|..   ..+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~---~~~~~~CgGtLI~~~~VLTAAHC~~~   46 (228)
T 1fxy_A            1 IVGGYNCKDGEVPWQALLIN---EENEGFCGGTILSEFYILTAAHCLYQ   46 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEEC---TTSCEEEEEEECSSSEEEECGGGTTS
T ss_pred             CCCCEECCCCCcCcEEEEEc---CCCCeeEEEEEeeCCEEEECHHHCCC
Confidence            78999999999999999963   23468999999999999999999964

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=98.93  E-value=5.5e-10  Score=110.46  Aligned_cols=47  Identities=30%  Similarity=0.687  Sum_probs=41.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|..  +..+.++|||+||+++||||||||+..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~--~~~~~~~CgGtLI~~~~VLTAAHC~~~   47 (238)
T 4e7n_A            1 IIGGDECNINEHRFLVALYT--SRSRTLFCGGTLINQEWVLTAAHCDRK   47 (238)
T ss_dssp             CBSCEECCTTSCTTEEEEEC--TTTCCEEEEEEECSSSEEEECGGGCCS
T ss_pred             CCCCeeCCCCCcCcEEEEEE--CCCCCEEEEEEEecCCEEEEhHHcCCC
Confidence            78999999999999999963  334678999999999999999999875

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=98.93  E-value=6.6e-10  Score=110.11  Aligned_cols=45  Identities=31%  Similarity=0.556  Sum_probs=40.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |++|+++..++||||+.|+.    .+.++|||+||+++||||||||+..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAHC~~~   45 (223)
T 1lo6_A            1 LVHGGPCDKTSHPYQAALYT----SGHLLCGGVLIHPLWVLTAAHCKKP   45 (223)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCT
T ss_pred             CCCCEECCCCCCCCEEEEec----CCCEEEEeEEecCCEEEECccCCCC
Confidence            78999999999999999963    3568999999999999999999864

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=98.93  E-value=4.5e-10  Score=111.06  Aligned_cols=45  Identities=47%  Similarity=0.930  Sum_probs=40.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~   45 (235)
T 4dgj_A            1 IVGGSDAKEGAWPWVVGLYY----DDRLLCGASLVSSDWLVSAAHCVYG   45 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEECSSSEEEECHHHHTT
T ss_pred             CCCCccCCCCCCCcEEEEee----CCCeEEEEEEeeCCEEEECHHhcCC
Confidence            78999999999999999974    3568999999999999999999854

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=98.93  E-value=6.2e-10  Score=110.01  Aligned_cols=47  Identities=32%  Similarity=0.731  Sum_probs=41.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|..  +..+.++|||+||+++||||||||+..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~--~~~~~~~CgGtLI~~~~VLTAAHC~~~   47 (234)
T 3s9c_A            1 VVGGDECNINEHPFLVALYT--SASSTIHCAGALINREWVLTAAHCDRR   47 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEE--TTEEEEEEEEEEEETTEEEECGGGCCT
T ss_pred             CCCCeeCCCCCCCeEEEEEE--CCCCcEEEeeEEeeCCEEEEchhhcCC
Confidence            78999999999999999963  224568999999999999999999864

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=98.92  E-value=5.8e-10  Score=109.63  Aligned_cols=44  Identities=43%  Similarity=0.823  Sum_probs=40.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|.     .+.++|+|+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~-----~~~~~C~GtLI~~~~VLTAAhC~~~   44 (223)
T 4i8h_A            1 IVGGYTCGANTVPYQVSLN-----SGYHFCGGSLINSQWVVSAAHCYKS   44 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-----SSSEEEEEEECSSSEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCeEEEec-----CCCcEEEEEEEcCCEEEecHHhCCC
Confidence            7899999999999999996     3568999999999999999999874

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=98.92  E-value=5e-10  Score=111.13  Aligned_cols=45  Identities=51%  Similarity=0.995  Sum_probs=40.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|.+++||||+.|..    .+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLIs~~~VLTAAhC~~~   45 (235)
T 2wph_S            1 VVGGEDAKPGQFPWQVVLNG----KVDAFCGGSIVNEKWIVTAAHCVET   45 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEES----SSTTCEEEEEEETTEEEECGGGCCT
T ss_pred             CCCCEECCCCCCCeEEEEcc----CCCeeEEEEEEeCCEEEECHHHCcC
Confidence            78999999999999999963    2368999999999999999999975

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=98.92  E-value=6e-10  Score=110.34  Aligned_cols=44  Identities=48%  Similarity=0.802  Sum_probs=40.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|+.     +.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-----~~~~CgGsLIs~~~VLTAAHC~~~   44 (222)
T 1hj8_A            1 IVGGYECKAYSQPHQVSLNS-----GYHFCGGSLVNENWVVSAAHCYKS   44 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEES-----SSEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCEEEEEEc-----CCcEEEeEEecCCEEEECHHhcCC
Confidence            78999999999999999952     468999999999999999999863

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=98.92  E-value=4.5e-10  Score=122.52  Aligned_cols=49  Identities=43%  Similarity=0.817  Sum_probs=44.0

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      ..||+||.+|.+++||||+.|..  +..+.+||||+||+++||||||||+.
T Consensus       163 ~~RIvgG~~a~~g~~Pw~v~l~~--~~~~~~~CGGsLIs~~~VLTAAHCv~  211 (424)
T 3nxp_A          163 DGRIVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLL  211 (424)
T ss_dssp             SSCCCCCEECCTTSCTTEEEEEE--TTTTEEEEEEEESSSSEEEECHHHHE
T ss_pred             CCeeECCEECCCCCCCCEEEEee--cCCCCccceeEEEcCCEEEEhHHhcC
Confidence            67999999999999999999963  34457899999999999999999985

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=98.92  E-value=7.1e-10  Score=118.91  Aligned_cols=49  Identities=49%  Similarity=1.134  Sum_probs=41.7

Q ss_pred             CCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       558 ~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      .+..||+||.++..++||||+.|+.    .+.++|||+||+++||||||||+.
T Consensus       113 ~~~~rIvgG~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHCv~  161 (372)
T 1z8g_A          113 LPVDRIVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHCFP  161 (372)
T ss_dssp             CC---CBSCEECCTTSSTTEEEEEE----TTEEEEEEEESSSSEEEECGGGCC
T ss_pred             CCCCceECCEECCCCCCCcEEEEEe----CCceEEEEEEecCCEEEEChhhcC
Confidence            3467999999999999999999974    357899999999999999999994

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=98.92  E-value=6.3e-10  Score=110.65  Aligned_cols=44  Identities=25%  Similarity=0.622  Sum_probs=40.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|..     +.++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-----~~~~CgGsLIs~~~VLTAAHC~~~   44 (231)
T 2aiq_A            1 VIGGDECNINEHRFLALVYA-----NGSLCGGTLINQEWVLTARHCDRG   44 (231)
T ss_dssp             CBSCEECCTTSCTTEEEEEE-----TTEEEEEEECSSSEEEECGGGCCS
T ss_pred             CCCCeECCCCCCCeEEEEEc-----CCCeEEEEEEeCCEEEEcHHcCCC
Confidence            78999999999999999963     348999999999999999999875

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=98.91  E-value=7.7e-10  Score=109.78  Aligned_cols=48  Identities=44%  Similarity=0.864  Sum_probs=41.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||.++.+++||||+.|+..  ....++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~--~~~~~~CgGtLIs~~~VLTAAHC~~~~   48 (238)
T 1ym0_A            1 IVGGIEARPYEFPWQVSVRRK--SSDSHFCGGSIINDRWVVCAAHCMQGE   48 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEEG--GGTEEEEEEEEEETTEEEECHHHHTTC
T ss_pred             CCCCEECCCCccCCEEEEEeC--CCCceEEEEEEeeCCEEEECHHhCCCC
Confidence            789999999999999999742  234789999999999999999999764

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=98.91  E-value=4.8e-10  Score=110.77  Aligned_cols=43  Identities=42%  Similarity=0.746  Sum_probs=39.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|.      +.++|+|+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~------~~~~CgGtLI~~~~VLTAAhC~~~   43 (242)
T 3tvj_B            1 IYGGQKAKPGDFPWQVLIL------GGTTAAGALLYDNWVLTAAHAVYE   43 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEE------SSEEEEEEEETTTEEEECHHHHST
T ss_pred             CcCCeeCCCCCCCCEEEEe------cCCcEEEEEecCCEEEECHHHCCC
Confidence            7899999999999999996      468999999999999999999964

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=98.91  E-value=7.3e-10  Score=109.30  Aligned_cols=45  Identities=27%  Similarity=0.600  Sum_probs=40.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++..++||||+.|..    .+.++|||+||+++||||||||+..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~~   45 (234)
T 3s69_A            1 VIGGDECNINEHRSLVAFFN----STGFFCSGTLINEEWVLTAAHCDNT   45 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEC----SSCEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCccCCCCCCceEEEEee----CCCeEEeEEEeeCCEEEEchhhCCC
Confidence            78999999999999999963    3568999999999999999999864

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=98.90  E-value=6.8e-10  Score=110.36  Aligned_cols=42  Identities=40%  Similarity=0.836  Sum_probs=38.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      |+||++|..++||||+.|..     + ++|||+||+++||||||||+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-----~-~~CgGsLIs~~~VLTAAHC~~   42 (235)
T 1ton_A            1 IVGGYKCEKNSQPWQVAVIN-----E-YLCGGVLIDPSWVITAAHCYS   42 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEES-----S-SEEEEEEEETTEEEECGGGCC
T ss_pred             CCCCEECCCCCcCcEEEEcc-----C-CeEEEEEecCCEEEEcHHhCC
Confidence            78999999999999999963     2 899999999999999999985

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=98.88  E-value=9.9e-10  Score=108.83  Aligned_cols=43  Identities=44%  Similarity=0.838  Sum_probs=39.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      |+||.+|..++||||+.|+     .+.++|||+||+++||||||||+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~-----~~~~~CgGsLIs~~~VLTAAHC~~   43 (223)
T 3mfj_A            1 IVGGYTCGANTVPYQVSLN-----SGYHFCGGSLINSQWVVSAAHCYK   43 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-----SSSEEEEEEEEETTEEEECGGGCC
T ss_pred             CCCCEECCCCcCCEEEEEE-----cCCeEEEEEEecCCEEEEhHHhcC
Confidence            7899999999999999994     146899999999999999999985

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=98.87  E-value=8.7e-10  Score=119.64  Aligned_cols=52  Identities=27%  Similarity=0.595  Sum_probs=43.3

Q ss_pred             CcceeCC-cccCCCcccceEEEeeeec----ccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGG-EKATFGKWPWQISLRQWIR----STYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g-~~~~~g~~Pw~~~l~~~~~----~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||++| ++|..++||||+.|.....    ....++|||+||+++||||||||+.+
T Consensus       127 ~~rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~  183 (394)
T 2b9l_A          127 DFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNS  183 (394)
T ss_dssp             SCEEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGG
T ss_pred             CceeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecC
Confidence            3589999 8999999999999974221    13468999999999999999999875

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=98.87  E-value=1.3e-09  Score=108.13  Aligned_cols=44  Identities=41%  Similarity=0.833  Sum_probs=39.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      |++|+++..++||||+.|..    +..++|||+||+++||||||||+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~----~~~~~CgGtLI~~~~VLTAAHC~~   44 (224)
T 2qxi_A            1 IIDGAPCARGSHPWQVALLS----GNQLHCGGVLVNERWVLTAAHCKM   44 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCC
T ss_pred             CCCCeECCCCCCCCEEEEee----CCCeEEEEEEecCCEEEEhHHcCC
Confidence            78999999999999999942    344599999999999999999985

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=98.87  E-value=6.3e-10  Score=116.96  Aligned_cols=45  Identities=44%  Similarity=0.808  Sum_probs=38.9

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||+||++|..++||||+.|.       .++|||+||+++||||||||+.+
T Consensus        80 ~~rIvgG~~a~~~~~Pw~v~l~-------~~~CgGsLIs~~~VLTAAHC~~~  124 (333)
T 1elv_A           80 KQRIIGGSDADIKNFPWQVFFD-------NPWAGGALINEYWVLTAAHVVEG  124 (333)
T ss_dssp             ---CBTCEECCGGGSTTEEEEE-------TTEEEEEEEETTEEEECHHHHTT
T ss_pred             cceeecCcccCCCCcCeEEEec-------CCceeEEEecCCEEEehhheeCC
Confidence            5799999999999999999993       24899999999999999999875

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=98.87  E-value=1.7e-09  Score=107.99  Aligned_cols=45  Identities=33%  Similarity=0.675  Sum_probs=40.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++.. +||||+.|+..    +.++|||+||+++||||||||+.+.
T Consensus         1 IvgG~~a~~-~~Pw~v~l~~~----~~~~CgGtLIs~~~VLTAAHC~~~~   45 (240)
T 1si5_H            1 VVNGIPTRT-NIGWMVSLRYR----NKHICGGSLIKESWVLTARQCFPSR   45 (240)
T ss_dssp             CBSCEECSS-CCTTEEEEEES----SSEEEEEEEEETTEEEEEGGGCSSS
T ss_pred             CCCCeeCCC-CCCeEEEEEeC----CCeEEEEEEeeCCEEEEhHHhcCCC
Confidence            789999999 99999999741    5789999999999999999999753

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=98.86  E-value=8.4e-10  Score=109.81  Aligned_cols=42  Identities=40%  Similarity=0.838  Sum_probs=38.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      |+||++|.+++||||+.|..      .++|||+||+++||||||||+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~------~~~CgGtLIs~~~VLTAAHC~~   42 (242)
T 2qy0_B            1 IIGGQKAKMGNFPWQVFTNI------HGRGGGALLGDRWILTAAHTLY   42 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEES------SSEEEEEEETTTEEEECHHHHS
T ss_pred             CCCCEECCCCCCCcEEEEcc------CCCEEEEEEeCCEEEEcHHhcc
Confidence            78999999999999999963      3689999999999999999986

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=98.86  E-value=9.6e-10  Score=108.12  Aligned_cols=41  Identities=41%  Similarity=0.901  Sum_probs=38.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|..++||||+.|.        ++|||+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~--------~~CgGtLI~~~~VLTAAHC~~~   41 (224)
T 3beu_A            1 VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSG   41 (224)
T ss_dssp             CBTCEECCTTTSTTEEEET--------TTEEEEEEETTEEEECGGGSCS
T ss_pred             CCCCeECCCCCCCEEEEEC--------CceeEEEeeCCEEEEChhhcCC
Confidence            7899999999999999994        5799999999999999999975

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=98.85  E-value=1.2e-09  Score=115.17  Aligned_cols=45  Identities=40%  Similarity=0.817  Sum_probs=39.6

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE  610 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~  610 (697)
                      ..||+||++|..++||||+.|..      .++|||+||+++||||||||+.
T Consensus        87 ~~rIvgG~~a~~~~~Pw~v~l~~------~~~CgGsLIs~~~VLTAAHCv~  131 (329)
T 1md8_A           87 RQRIIGGQKAKMGNFPWQVFTNI------HGRGGGALLGDRWILTAAHTLY  131 (329)
T ss_dssp             C--CBSCCBCCTTSCTTEEEEES------SSEEEEEEETTTEEEECGGGTS
T ss_pred             cccccCCEECCCCCCCCeEeecc------CCCcceEEecCCEEEecCCEEE
Confidence            57999999999999999999962      3589999999999999999986

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=98.85  E-value=1.2e-09  Score=108.84  Aligned_cols=48  Identities=38%  Similarity=0.819  Sum_probs=32.8

Q ss_pred             CCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        565 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       565 ~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ||++|.+++||||+.|+........++|||+||+++||||||||+.+.
T Consensus         1 gG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAhC~~~~   48 (240)
T 1fon_A            1 NGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTS   48 (240)
T ss_dssp             --------CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCTT
T ss_pred             CCccCCcCCcccEEEEEEecCCcEeeEEEEEEeeCCEEEECHHHCCCC
Confidence            588999999999999975322223589999999999999999999753

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=98.84  E-value=1.5e-09  Score=116.40  Aligned_cols=46  Identities=37%  Similarity=0.771  Sum_probs=41.5

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||+||++|..++||||+.|..      .++|||+||+++||||||||+.+
T Consensus       155 ~~rIvgG~~a~~~~~Pw~v~l~~------~~~CgGsLIs~~~VLTAAHC~~~  200 (399)
T 1gpz_A          155 RQQIIGGQKAKMGNFPWQVFTNI------HGRGGGALLGDRWILTAAHTLYP  200 (399)
T ss_dssp             SCCCCSCEECCTTSSTTEEEEES------SSEEEEEEETTTEEEECGGGTSC
T ss_pred             CCEEECCEECCCCCCCCEEEECC------CCCeEEEEeCCCEEEeChhcccc
Confidence            57999999999999999999852      35899999999999999999864

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=98.83  E-value=1.3e-09  Score=117.35  Aligned_cols=46  Identities=39%  Similarity=0.736  Sum_probs=42.4

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||+||++|..++||||+.|..      .++|||+||+++||||||||+.+
T Consensus       159 ~~rIvgG~~a~~~~~Pw~v~l~~------~~~CgGsLIs~~~VLTAAHC~~~  204 (403)
T 1zjk_A          159 GGQIYGGQKAKPGDFPWQVLILG------GTTAAGALLYDNWVLTAAHAVYE  204 (403)
T ss_dssp             SCCCSSCEECCTTSSTTEEEEEE------SCCEEEEEETTTEEEECHHHHGG
T ss_pred             CccccCCcCCCCCCcCCEeEecc------CCceEEEEecCCEEEEcHHhCCC
Confidence            57999999999999999999974      47999999999999999999865

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=98.81  E-value=2.3e-09  Score=106.78  Aligned_cols=43  Identities=42%  Similarity=0.896  Sum_probs=37.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+   +++||||+.|+.   ..+.++|||+||+++||||||||+.+
T Consensus         1 IvgG~---~~~~Pw~v~l~~---~~~~~~CgGtLI~~~~VLTAAHC~~~   43 (234)
T 2asu_B            1 VVGGH---PGNSPWTVSLRN---RQGQHFCGGSLVKEQWILTARQCFSS   43 (234)
T ss_dssp             CBSCE---ECCCTTEEEEEC---TTSCEEEEEEEEETTEEEEEGGGSSC
T ss_pred             CCCcc---cCCCcceEEeec---cCCCEEEEEEEEeCCEEEECHHHcCC
Confidence            67887   689999999963   23578999999999999999999964

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=98.79  E-value=2.4e-09  Score=105.24  Aligned_cols=46  Identities=37%  Similarity=0.783  Sum_probs=38.6

Q ss_pred             CCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        565 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       565 ~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ||+++.+++||||+.|... +....++|||+||+++||||||||+.+
T Consensus         2 gG~~a~~~~~Pw~v~l~~~-~~~~~~~CgGtLI~~~~VLTAAHC~~~   47 (228)
T 3h7o_A            2 GGEKTDIKQVPWTVAVRTY-PGEESLTCGGAILSQWFVLTAAHCVFD   47 (228)
T ss_dssp             CCEECCGGGSTTEEEEEEC-GGGCCEEEEEEESSSSEEEECHHHHTT
T ss_pred             CCccCCcCCCCeEEEEeec-CCCCceEeeeEEeeCCEEEEcHHhccc
Confidence            7899999999999999742 222244999999999999999999964

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=98.77  E-value=3.5e-09  Score=121.16  Aligned_cols=51  Identities=41%  Similarity=0.922  Sum_probs=44.8

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||+||.++.+++||||+.|+.. ...+.++|||+||+++||||||||+.+
T Consensus       385 ~~rIvgG~~a~~~~~Pw~v~L~~~-~~~~~~~CgGsLIs~~~VLTAAHC~~~  435 (625)
T 2f83_A          385 KPRIVGGTASVRGEWPWQVTLHTT-SPTQRHLCGGSIIGNQWILTAAHCFYG  435 (625)
T ss_dssp             CSCCCSSSSCCTTSSTTEEEEEEC-SSSSEEEEEEEECSSSEEEECGGGGSS
T ss_pred             CCceECCEECCCCCCCeEEEEEEe-cCCCcEEEEEEEECCCEEEEcHHhCCC
Confidence            579999999999999999999742 233678999999999999999999865

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=98.72  E-value=3.5e-09  Score=119.84  Aligned_cols=48  Identities=38%  Similarity=0.873  Sum_probs=31.3

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||+||++|.+++||||+.|+.    .+.++|||+||+++||||||||+.+
T Consensus       319 ~~rIvgG~~a~~g~~Pw~v~l~~----~~~~~CGGsLIs~~~VLTAAHCv~~  366 (565)
T 2xrc_A          319 RKRIVGGKRAQLGDLPWQVAIKD----ASGITCGGIYIGGCWILTAAHCLRA  366 (565)
T ss_dssp             -------------CCTTBCEEEE----SSSCCCCCEEEETTEEEECHHHHTT
T ss_pred             CCceECCEECCCCCCCcEEEEec----CCceeeeEEEEeCCEEEEChhhccc
Confidence            57999999999999999999963    3568999999999999999999875

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=98.71  E-value=6.8e-09  Score=121.94  Aligned_cols=49  Identities=47%  Similarity=0.963  Sum_probs=43.9

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..||+||.+|.+++|||||.|+.   ..+.++|||+||+++||||||||+.+
T Consensus       559 ~~RIvGG~~a~~~~~PW~VsL~~---~~~~~~CGGSLIs~~wVLTAAHCv~~  607 (791)
T 4dur_A          559 PGRVVGGCVAHPHSWPWQVSLRT---RFGMHFCGGTLISPEWVLTAAHCLEK  607 (791)
T ss_dssp             CTTCTTCEECCTTSSTTEEEEEC---TTSCEEEEEEEEETTEEEECGGGGSS
T ss_pred             CCceECCEECCCCCCCeEEEEEe---cCCCeEEEEEEEeCCEEEECHHHcCC
Confidence            47999999999999999999963   23578999999999999999999975

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=98.64  E-value=1.3e-08  Score=104.67  Aligned_cols=44  Identities=27%  Similarity=0.523  Sum_probs=32.4

Q ss_pred             CcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        566 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       566 g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+++..++||||+.|..   ..+.++|||+||+++||||||||+.+.
T Consensus        56 g~~a~~~~~Pw~v~l~~---~~~~~~CgGtLI~~~~VLTAAHC~~~~   99 (283)
T 3f1s_B           56 KRAPDLQDLPWQVKLTN---SEGKDFCGGVIIRENFVLTTAKCSLLH   99 (283)
T ss_dssp             -------CCTTEEEEEC---TTSCEEEEEEEEETTEEEECHHHHTSC
T ss_pred             CccccccccCCEEEEEe---cCCCeeeccEEecCCEEEEcHHhcCcc
Confidence            89999999999999973   346789999999999999999999653

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=98.64  E-value=6.9e-09  Score=114.26  Aligned_cols=45  Identities=27%  Similarity=0.711  Sum_probs=36.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      .++|+++..++||||+.|+.    .+.++|||+||+++||||||||+.+
T Consensus       224 ~~~g~~a~~~~~Pw~v~l~~----~~~~~CgGsLIs~~~VLTAAHC~~~  268 (509)
T 2odp_A          224 NMSANASDQERTPWHVTIKP----KSQETCRGALISDQWVLTAAHCFRD  268 (509)
T ss_dssp             CCCTTSCHHHHCTTEEEEEC--------CEEEEECSSSEEEECGGGC--
T ss_pred             CCCCCccccCCCCcEEEEEe----CCCcEEEEEEEcCCEEEEcHHHcCC
Confidence            46789999999999999963    3568999999999999999999864

>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}

Probab=98.60  E-value=2.1e-07  Score=95.01  Aligned_cols=84  Identities=21%  Similarity=0.354  Sum_probs=57.2

Q ss_pred             eeeeEEEeeCc--ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccc
Q psy12777        418 HKCGAALFNEN--WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV  495 (697)
Q Consensus       418 ~~CGGTLIS~r--wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV  495 (697)
                      ..+.|.||+++  ||||+|||+.+  ...+.|.+..           ...+..+.+..++.       +|||||||+.+.
T Consensus        63 ~~GSGfiI~~~~G~IlTnaHvv~~--a~~i~V~~~d-----------g~~~~a~vv~~d~~-------~DlAlLkv~~~~  122 (245)
T 3sti_A           63 GLGSGVIINASKGYVLTNNHVINQ--AQKISIQLND-----------GREFDAKLIGSDDQ-------SDIALLQIQNPS  122 (245)
T ss_dssp             -CCEEEEEETTTTEEEECGGGC------CEEEECTT-----------SCEEEEEEEEEETT-------TTEEEEEESSCC
T ss_pred             ceEEEEEEeCCCCEEEEcHHHhCC--CCEEEEEECC-----------CCEEEEEEEEecCC-------CCEEEEEeccCC
Confidence            46899999998  99999999975  3456676532           13344555555554       599999997643


Q ss_pred             ccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        496 KFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       496 ~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                          .+.++.|........|+.++++||..
T Consensus       123 ----~~~~~~l~~s~~~~~G~~v~aiG~P~  148 (245)
T 3sti_A          123 ----KLTQIAIADSDKLRVGDFAVAVGNPF  148 (245)
T ss_dssp             ----SCCCCCBCCGGGCCTTBEEEEEECGG
T ss_pred             ----CCceeeecCcCCCCCCCEEEEEECCC
Confidence                45677787654434699999999854

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...

Probab=98.60  E-value=4.1e-08  Score=85.98  Aligned_cols=50  Identities=28%  Similarity=0.581  Sum_probs=43.0

Q ss_pred             CCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        640 LPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       640 ~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                      .+..||++.|+++++++|++.|.     ..+.++||||+  ..+.++|+||||||+.
T Consensus         3 ~~~~L~~~~v~i~~~~~C~~~~~-----~~i~~~~iCa~--~~~~~~C~GDSGGPL~   52 (97)
T 1yph_E            3 TPDRLQQASLPLLSNTNCKKYWG-----TKIKDAMICAG--ASGVSSCMGDSGGPLV   52 (97)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHHG-----GGCCTTEEEEE--CSSCBCCTTCTTCEEE
T ss_pred             cCccceEEEEEECCHHHhhHHhc-----CCCCCceEeec--CCCCCCCcCCCCCcEE
Confidence            57889999999999999998874     24789999999  3457999999999873

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=98.59  E-value=1.4e-08  Score=111.24  Aligned_cols=46  Identities=28%  Similarity=0.464  Sum_probs=37.8

Q ss_pred             CcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        566 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       566 g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      +.++..++||||+.|.......+.++|||+||+++||||||||+.+
T Consensus       218 ~~~~~~~~~Pw~v~l~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~  263 (497)
T 1rrk_A          218 RKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV  263 (497)
T ss_dssp             TTCCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCT
T ss_pred             CCCCCccccCcEEEEEEEcCCCCCceeEEEEecCCEEEECHHhCCC
Confidence            4567789999999997544445678999999999999999999864

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.58  E-value=2.8e-08  Score=103.37  Aligned_cols=44  Identities=27%  Similarity=0.531  Sum_probs=38.8

Q ss_pred             CCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        565 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       565 ~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      .|+++..++||||+.|..   ..+.++|||+||+++||||||||+.+
T Consensus        96 ~G~~a~~~~~Pw~v~l~~---~~~~~~CgGtLIs~~~VLTAAHC~~~  139 (317)
T 3h5c_B           96 EKRAPDLQDLPWQVKLTN---SEGKDFCGGVIIRENFVLTTAKCSLL  139 (317)
T ss_dssp             CCSSCCTTCCTTEEEEEC---SSSCEEEEEEEEETTEEEECHHHHHS
T ss_pred             ccccCccCCCCcEEEEec---cCCceeeeeEEeeCCEEEEChHhcCc
Confidence            388999999999999963   34678999999999999999999865

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=98.46  E-value=6.8e-08  Score=110.90  Aligned_cols=49  Identities=27%  Similarity=0.401  Sum_probs=34.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ..+|+++..+.||||+.|....+.++.++|||+||+++||||||||+.+
T Consensus       457 ~~~~~~~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~  505 (741)
T 3hrz_D          457 WEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV  505 (741)
T ss_dssp             CCC---CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC-
T ss_pred             cccCCcccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhccc
Confidence            3458899999999998887654556778999999999999999999874

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=98.40  E-value=1.7e-07  Score=93.20  Aligned_cols=40  Identities=20%  Similarity=0.199  Sum_probs=33.7

Q ss_pred             CCcccceEEEeeeecccceeeeeeeEee---CcEEEeecccccc
Q psy12777        571 FGKWPWQISLRQWIRSTYLHKCGAALFN---ENWAVTAAHCVED  611 (697)
Q Consensus       571 ~g~~Pw~~~l~~~~~~~~~~~CgGslI~---~~~VLSAAHC~~~  611 (697)
                      ++.|||++.|... ..++.++|||+||+   ++||||||||+.+
T Consensus         3 ~~~~p~~g~l~~~-~~~~~~~CgGslI~s~s~~~VLTAAHC~~~   45 (218)
T 3cp7_A            3 PADSPHIGKVFFS-TNQGDFVCSANIVASANQSTVATAGHCLHD   45 (218)
T ss_dssp             CTTCTTEEEEEEE-ETTEEEEEEEEEBCCTTSCEEEECGGGTBC
T ss_pred             CCCCceEEEEEEE-cCCCCeEEEEEEEecCCCCEEEEChHhcCc
Confidence            5789999999752 34567899999999   9999999999853

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=98.27  E-value=2.4e-07  Score=90.72  Aligned_cols=104  Identities=13%  Similarity=0.125  Sum_probs=70.4

Q ss_pred             cceeCCcccCCCcccce--EEEeeeecccceeeeeeeEeeCcEEEeeccccccccc-----------------------c
Q psy12777        561 SRIVGGEKATFGKWPWQ--ISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS-----------------------Q  615 (697)
Q Consensus       561 ~rI~~g~~~~~g~~Pw~--~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~-----------------------~  615 (697)
                      .||++|++     +||+  +.++     .+.++|+|+||+++||||||||+.+...                       .
T Consensus         9 ~rI~~g~~-----~P~~~~~~~~-----~~~~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~   78 (215)
T 1p3c_A            9 TKVANTRV-----APYNSIAYIT-----FGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSAN   78 (215)
T ss_dssp             EECSCTTS-----TTGGGEEEEE-----CSSCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEE
T ss_pred             EEecCCCc-----CCCeEEEEEE-----cCCceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCCeEE
Confidence            57888876     4673  3332     2468999999999999999999864210                       1


Q ss_pred             eeeeeec-----------------------------cccccc---------ccccccccCCCCCCCceEEEEeeechhHH
Q psy12777        616 IIPIIQN-----------------------------CRRRES---------NLWKMALADGPLPSVLQEVSVPVINNSLC  657 (697)
Q Consensus       616 ~i~~~~~-----------------------------~~~~~~---------~~Wg~~~~~~~~s~vLq~~~V~vis~~~C  657 (697)
                      +..++.|                             |++...         .|||.... +..+..|+++.+++++++.|
T Consensus        79 v~~i~~hp~y~~~~~~~~DiAll~L~~~~~~~v~pi~l~~~~~~~g~~~~~~Gwg~~~~-~~~~~~l~~~~~~~~~~~~c  157 (215)
T 1p3c_A           79 MTEFYVPSGYINTGASQYDFAVIKTDTNIGNTVGYRSIRQVTNLTGTTIKISGYPGDKM-RSTGKVSQWEMSGSVTREDT  157 (215)
T ss_dssp             EEEEECCHHHHHHCCGGGCCEEEEESSCHHHHHCCCCBCCCSCCTTCEEEEEECCHHHH-HHHSSCCCEEEEEECCEECS
T ss_pred             EEEEEeCCccccCCCcccCEEEEEECCCCcccceeeecCCCcccCCCeEEEecCCCCCc-ccccceechhccCccCcccc
Confidence            1122222                             333211         15886543 23467899999999999999


Q ss_pred             HHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        658 ETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       658 ~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                      +..+                    ++.++|+||||||+
T Consensus       158 ~~~~--------------------~~~~~C~GDSGgPl  175 (215)
T 1p3c_A          158 NLAY--------------------YTIDTFSGNSGSAM  175 (215)
T ss_dssp             SEEE--------------------ECCCCCTTCTTCEE
T ss_pred             hhee--------------------eccccCCCCCCCee
Confidence            7533                    14689999999987

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=98.06  E-value=1.4e-06  Score=89.40  Aligned_cols=43  Identities=12%  Similarity=0.005  Sum_probs=32.8

Q ss_pred             cCCCcccceEEEe-eeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        569 ATFGKWPWQISLR-QWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       569 ~~~g~~Pw~~~l~-~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      +..+.|||++.+. +.....+.++|+|+||+++||||||||+.+
T Consensus        12 ~~~~~~P~~~~v~l~~~~~~g~~~CgG~lI~~~~VLTAAHCv~~   55 (268)
T 1wcz_A           12 TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDA   55 (268)
T ss_dssp             SCTTSGGGTTEEEEEEEC-CCEEEEEEEECSSSEEEECHHHHGG
T ss_pred             cCCCCCCccEEEEEEEEcCCCCEEEEEEEEECCEEEEChhhCCC
Confidence            4567899986543 223344678999999999999999999865

>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1

Probab=98.03  E-value=5.7e-06  Score=80.76  Aligned_cols=87  Identities=16%  Similarity=0.191  Sum_probs=49.5

Q ss_pred             eeee-EEEeeC---cceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCc
Q psy12777        418 HKCG-AALFNE---NWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYE  493 (697)
Q Consensus       418 ~~CG-GTLIS~---rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~  493 (697)
                      +.|. |.++.+   .|||||+||+...  .  .+.++..         ....-.+..    .+|    ..+|||||||+.
T Consensus        12 ~~CT~Gfiv~~~g~~~ilT~~Hv~~~~--~--~v~~~~~---------~~~~g~~~~----~~~----~~~DiAlikl~~   70 (187)
T 1hpg_A           12 SRCSAAFNVTKGGARYFVTAGHCTNIS--A--NWSASSG---------GSVVGVREG----TSF----PTNDYGIVRYTD   70 (187)
T ss_dssp             EEEECCEEEEETTEEEEEECHHHHTTC--S--EEESSTT---------CCEEEEEEE----EEC----SBSCEEEEEECS
T ss_pred             CcCcceEEEEECCeeEEEECcccCCCC--C--eEEeCCC---------ceeEEEEeC----ccC----CCCCEEEEEeCC
Confidence            5698 788877   4999999999652  2  2322110         001011111    122    147999999998


Q ss_pred             ccccCCCeee-----eecCCCCCCCCCCEEEEEeccc
Q psy12777        494 PVKFQPNIIP-----ICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       494 PV~fs~~V~P-----ICLP~~~~~~~G~~c~VtGWG~  525 (697)
                      ++.+...+..     +.+........|+.+...||..
T Consensus        71 ~~~~~~~v~~~~g~~~~i~~~~~~~~G~~v~~~G~~~  107 (187)
T 1hpg_A           71 GSSPAGTVDLYNGSTQDISSAANAVVGQAIKKSGSTT  107 (187)
T ss_dssp             SCCCCSEEECSSSCEEECCEECCCCTTCEEEEEETTT
T ss_pred             CCCcCceEEecCCceeeeccccCCCCCCEEEEEEcCC
Confidence            7665543322     3333333333688888889853

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=98.03  E-value=1.4e-06  Score=87.12  Aligned_cols=42  Identities=14%  Similarity=0.172  Sum_probs=33.7

Q ss_pred             ccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        568 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       568 ~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ++..+.|||++.+....  .+.++|+|+||+++||||||||+.+
T Consensus        35 ~a~~~~~p~~~~v~i~~--~~~~~c~G~lI~~~~VLTAaHcv~~   76 (242)
T 1agj_A           35 EKDRQKYPYNTIGNVFV--KGQTSATGVLIGKNTVLTNRHIAKF   76 (242)
T ss_dssp             TTGGGSTTGGGEEEEEE--TTTEEEEEEECSSSEEEECHHHHGG
T ss_pred             cccccccccceEEEEEE--CCCccEEEEEEeCCEEEEChhhccc
Confidence            46778999996654322  3468999999999999999999865

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=98.01  E-value=1.3e-06  Score=84.71  Aligned_cols=37  Identities=16%  Similarity=0.147  Sum_probs=32.2

Q ss_pred             ccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        568 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       568 ~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      .+..+.||||+.+.       .++|+|+||+++||||||||+.+
T Consensus         7 i~~~~~~P~~v~~~-------~~~c~G~lI~~~~VLTaaHcv~~   43 (200)
T 2w7s_A            7 ITDATKEPYNSVVA-------FVGGTGVVVGKNTIVTNKHIAKS   43 (200)
T ss_dssp             ESCTTSTTGGGEEE-------ETTEEEEEEETTEEEECHHHHHH
T ss_pred             eeccccCCcccccc-------cceEEEEEEECCEEEEChhhcCC
Confidence            46788999999874       36999999999999999999864

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=98.01  E-value=1.9e-06  Score=88.62  Aligned_cols=43  Identities=12%  Similarity=0.005  Sum_probs=33.0

Q ss_pred             cCCCcccceEEEe-eeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        569 ATFGKWPWQISLR-QWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       569 ~~~g~~Pw~~~l~-~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      +..+.|||++.+. +.....+.++|+|+||+++||||||||+.+
T Consensus        12 ~~~~~~P~~~~v~i~~~~~~~~~~C~G~lI~~~~VLTAAHCv~~   55 (274)
T 2o8l_A           12 TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDA   55 (274)
T ss_dssp             SSTTSGGGTTEEEEEEEETTEEEEEEEEEEETTEEEECHHHHHT
T ss_pred             cCCCCCCcceEEEEEEEcCCCCEEEEEEEEECCEEEEChhhCcc
Confidence            4467889985543 223344668999999999999999999865

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=98.01  E-value=1.5e-06  Score=83.86  Aligned_cols=38  Identities=11%  Similarity=0.180  Sum_probs=32.2

Q ss_pred             ccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        568 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       568 ~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      .+..+.||||+.++       .++|+|+||+++||||||||+.+.
T Consensus         7 ~~~~~~~P~~~~~~-------~~~c~G~lI~~~~VLTaaHcv~~~   44 (204)
T 2vid_A            7 VKDTNIFPYTGVVA-------FKSATGFVVGKNTILTNKHVSKNY   44 (204)
T ss_dssp             CSCTTSTTGGGEEE-------CSSCEEEEEETTEEEECHHHHTTC
T ss_pred             eccCCcCchhheEE-------eeeEEEEEEECCEEEEChhHCCCc
Confidence            46688999999664       259999999999999999998753

>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}

Probab=97.97  E-value=1.8e-05  Score=84.47  Aligned_cols=86  Identities=21%  Similarity=0.318  Sum_probs=61.2

Q ss_pred             eeeeeEEEeeCc--ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcc
Q psy12777        417 LHKCGAALFNEN--WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP  494 (697)
Q Consensus       417 ~~~CGGTLIS~r--wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~P  494 (697)
                      ...|.|.||+++  ||||+|||+.+  ...+.|.+..           .+.+..+.+..|+.       +|||||||+.+
T Consensus        62 ~~~GSGfiI~~~~G~IlTnaHVv~~--~~~i~V~~~d-----------g~~~~a~vv~~d~~-------~DlAlLkv~~~  121 (345)
T 3stj_A           62 EGLGSGVIINASKGYVLTNNHVINQ--AQKISIQLND-----------GREFDAKLIGSDDQ-------SDIALLQIQNP  121 (345)
T ss_dssp             EEEEEEEEEETTTTEEEECHHHHTT--EEEEEEECTT-----------SCEEEEEEEEEETT-------TTEEEEEESSC
T ss_pred             ceeEEEEEEECCCCEEEEChHHhCC--CCEEEEEeCC-----------CcEEEEEEEEEcCC-------CCEEEEEEccc
Confidence            457999999997  99999999975  3345555431           24455666667765       59999999765


Q ss_pred             cccCCCeeeeecCCCCCCCCCCEEEEEecccc
Q psy12777        495 VKFQPNIIPICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       495 V~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                      .    .+.++.|........|+.+++.||...
T Consensus       122 ~----~~~~~~l~~s~~~~~G~~V~aiG~p~g  149 (345)
T 3stj_A          122 S----KLTQIAIADSDKLRVGDFAVAVGNPFG  149 (345)
T ss_dssp             C----SCCCCCBCCGGGCCTTBEEEEEECGGG
T ss_pred             C----CCceEeecCcccCCCCCEEEEEECCCC
Confidence            3    456777765444346999999999543

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=97.88  E-value=5e-06  Score=83.83  Aligned_cols=42  Identities=14%  Similarity=0.135  Sum_probs=32.8

Q ss_pred             cCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        569 ATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       569 ~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ...+.+|||+.+....  .+.++|+|+||+++||||||||+.+.
T Consensus        29 ~~~~~~P~~~~~~i~~--~~~~~c~G~lI~~~~VLTAaHcv~~~   70 (246)
T 1qtf_A           29 TDNARSPYNSVGTVFV--KGSTLATGVLIGKNTIVTNYHVAREA   70 (246)
T ss_dssp             SCCSSTTGGGEEEEEE--TTTEEEEEEEEETTEEEECHHHHGGG
T ss_pred             hhcCcCchhcEEEEEE--CCCceEEEEEEECCEEEECHHhCCCC
Confidence            3467899996543221  34689999999999999999998764

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=97.72  E-value=7.5e-06  Score=80.49  Aligned_cols=36  Identities=14%  Similarity=0.290  Sum_probs=30.7

Q ss_pred             cCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        569 ATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       569 ~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      +..+.||||+.+.       .++|+|+||+++||||||||+++
T Consensus         9 ~~~~~~P~~v~~~-------~~~c~G~lI~~~~VLTaaHcv~~   44 (210)
T 2as9_A            9 KDTNNFPYNGVVS-------FKDATGFVIGKNTIITNKHVSKD   44 (210)
T ss_dssp             SCTTSTTGGGEEE-------CSSCEEEEEETTEEEECHHHHHH
T ss_pred             ecCCcCCeEEEEE-------eeeEEEEEEeCCEEEECHhHCCc
Confidence            3478899999763       36999999999999999999864

>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A

Probab=97.68  E-value=0.0002  Score=78.48  Aligned_cols=85  Identities=21%  Similarity=0.339  Sum_probs=61.9

Q ss_pred             eeeeeEEEeeCc--ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcc
Q psy12777        417 LHKCGAALFNEN--WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP  494 (697)
Q Consensus       417 ~~~CGGTLIS~r--wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~P  494 (697)
                      ...+.|.||+++  ||||+|||+.+  ...+.|.+..           ...+..+-+..|+.       +||||||++.+
T Consensus        62 ~~~GSGfii~~~~G~IlTn~Hvv~~--a~~i~V~~~d-----------g~~~~a~vv~~d~~-------~DlAllkv~~~  121 (436)
T 4a8c_A           62 EGLGSGVIINASKGYVLTNNHVINQ--AQKISIQLND-----------GREFDAKLIGSDDQ-------SDIALLQIQNP  121 (436)
T ss_pred             ceEEEEEEEECCCCEEEECHHHhCC--CCEEEEEeCC-----------CCEEEEEEEEEcCC-------CCEEEEEecCC
Confidence            356999999997  99999999976  4466776531           23455566666765       59999999754


Q ss_pred             cccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        495 VKFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       495 V~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                      .    .+.++.|........|+.+++.||..
T Consensus       122 ~----~l~~~~l~~s~~~~~G~~v~aiG~P~  148 (436)
T 4a8c_A          122 S----KLTQIAIADSDKLRVGDFAVAVGNPF  148 (436)
T ss_pred             C----CCceEeccCcccCCCCCEEEEEEcCC
Confidence            3    45678887655444699999999844

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=97.67  E-value=2.2e-05  Score=81.17  Aligned_cols=25  Identities=28%  Similarity=0.434  Sum_probs=22.0

Q ss_pred             cceeeeeeeEeeC------cEEEeecccccc
Q psy12777        587 TYLHKCGAALFNE------NWAVTAAHCVED  611 (697)
Q Consensus       587 ~~~~~CgGslI~~------~~VLSAAHC~~~  611 (697)
                      .+.++|||+||++      +||||||||+.+
T Consensus        31 ~g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~   61 (268)
T 1arb_A           31 SGTLACTGSLVNNTANDRKMYFLTAHHCGMG   61 (268)
T ss_dssp             TTEEEEEEEEBCCTTCCCCCEEEEEGGGSCC
T ss_pred             CCccEEeEEEEcCCCCCCCCEEEEcHHhCCC
Confidence            4679999999998      699999999854

>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A

Probab=97.41  E-value=0.00019  Score=79.28  Aligned_cols=85  Identities=16%  Similarity=0.283  Sum_probs=59.1

Q ss_pred             eeeeeEEEeeC--cceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcc
Q psy12777        417 LHKCGAALFNE--NWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP  494 (697)
Q Consensus       417 ~~~CGGTLIS~--rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~P  494 (697)
                      ...+.|.||++  .||||+|||+.+  ...+.|.+..           ...+..+-+..|+.       +||||||++. 
T Consensus        76 ~~~GSGfiI~~~~G~IlTn~HVv~~--a~~i~V~~~d-----------g~~~~a~vv~~d~~-------~DlAlLkv~~-  134 (451)
T 3pv2_A           76 ESIGSGVIIDPNNGVIITNDHVIRN--ASLITVTLQD-----------GRRLKARLIGGDSE-------TDLAVLKIDA-  134 (451)
T ss_dssp             EEEEEEEEEETTTTEEEECHHHHTT--EEEEEEECTT-----------SCEEECEEEEEETT-------TTEEEEECCC-
T ss_pred             ceeEEEEEEECCCCEEEEChHHhCC--CCEEEEEEcC-----------CCEEEEEEEecCcC-------CcEEEEEEcC-
Confidence            34689999996  499999999975  3455665531           23455556666765       5999999963 


Q ss_pred             cccCCCeeeeecCCCCCCCCCCEEEEEe--cccc
Q psy12777        495 VKFQPNIIPICVPEDDTNFVGTSAHVTG--WGRL  526 (697)
Q Consensus       495 V~fs~~V~PICLP~~~~~~~G~~c~VtG--WG~t  526 (697)
                          ..+.++.|........|+.++++|  ||..
T Consensus       135 ----~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~  164 (451)
T 3pv2_A          135 ----KNLKSLVIGDSDKLEVGDFVVAIGNPFGLN  164 (451)
T ss_dssp             ----SSCCCCCBCCGGGCCTTCEEEEEECCCCC-
T ss_pred             ----cCCceeEecCcccCCCCCEEEEEECCCCcc
Confidence                345667776544434699999999  7754

>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A

Probab=97.05  E-value=0.0011  Score=73.01  Aligned_cols=84  Identities=20%  Similarity=0.380  Sum_probs=56.1

Q ss_pred             eeeeeEEEeeCc--ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcc
Q psy12777        417 LHKCGAALFNEN--WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEP  494 (697)
Q Consensus       417 ~~~CGGTLIS~r--wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~P  494 (697)
                      ...|.|.||+.+  ||||++||+.+  ...+.|.+..           ...+...-+..++       .+||||||++.+
T Consensus        85 ~~~GSG~ii~~~~g~IlTn~HVv~~--a~~i~V~~~d-----------g~~~~a~vv~~d~-------~~DlAvlkv~~~  144 (448)
T 1ky9_A           85 MALGSGVIIDADKGYVVTNNHVVDN--ATVIKVQLSD-----------GRKFDAKMVGKDP-------RSDIALIQIQNP  144 (448)
T ss_dssp             EEEEEEEEEETTTTEEEEEHHHHTT--EEEEEEEETT-----------SCEEEEEEEEEET-------TTTEEEEEESSC
T ss_pred             ccEEEEEEEECCCCEEEEChHHhCC--CCEEEEEECC-----------CCEEEEEEEEEcC-------CCCEEEEEecCC
Confidence            457999999975  99999999975  3456776641           1223333333333       469999999854


Q ss_pred             cccCCCeeeeecCCCCCCCCCCEEEEEecc
Q psy12777        495 VKFQPNIIPICVPEDDTNFVGTSAHVTGWG  524 (697)
Q Consensus       495 V~fs~~V~PICLP~~~~~~~G~~c~VtGWG  524 (697)
                          ..+.++.|........|+.+++.||.
T Consensus       145 ----~~~~~~~l~~s~~~~~G~~V~aiG~P  170 (448)
T 1ky9_A          145 ----KNLTAIKMADSDALRVGDYTVAIGNP  170 (448)
T ss_dssp             ----CSCCCCCBCCGGGCCTTCEEEEEECT
T ss_pred             ----CCCceEEecccccCCCCCEEEEEECC
Confidence                23456666654333369999999963

>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}

Probab=96.90  E-value=0.0012  Score=64.81  Aligned_cols=82  Identities=17%  Similarity=0.166  Sum_probs=50.9

Q ss_pred             eeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        417 LHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       417 ~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      ...|....+-..+||||+||+...  .  .|++.        +   ..   +    .+.+|    ..+|||||||+.++.
T Consensus        14 ~~~CT~Gf~~~~~ilTa~Hc~~~~--~--~v~~~--------d---g~---v----~~~~~----~~~DiAlikl~~~~~   67 (189)
T 2ea3_A           14 RSRCSIGFAVNGGFITAGHCGRTG--A--TTANP--------T---GT---F----AGSSF----PGNDYAFVRTGAGVN   67 (189)
T ss_dssp             EEEEECCEEETTEEEECGGGCCTT--C--EEETT--------T---EE---E----EEEEC----SBSCEEEEEECTTCE
T ss_pred             CCCCccCEEccCeEEEchhcCCCC--C--EEEeC--------C---cE---E----EeeCC----CCCCEEEEEECCCCc
Confidence            467996666666999999999642  1  22210        0   11   1    12222    246999999999887


Q ss_pred             cCCCee-----eeecCCCCCCCCCCEEEEEecccc
Q psy12777        497 FQPNII-----PICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       497 fs~~V~-----PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                      +.+.|+     +++|+.......|+.+.  .||++
T Consensus        68 ~~~~v~~~~g~~v~l~~s~~~~vG~~v~--~~G~~  100 (189)
T 2ea3_A           68 LLAQVNNYSGGRVQVAGHTAAPVGSAVC--RSGST  100 (189)
T ss_dssp             EEEEEECSSSCEEECCBCCCCCTTCEEE--EEETT
T ss_pred             cccceEecCCceeecCCCcCCCCCCEEE--EEEeC
Confidence            777776     77887644433577554  45543

>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}

Probab=96.12  E-value=0.025  Score=54.28  Aligned_cols=79  Identities=18%  Similarity=0.086  Sum_probs=48.0

Q ss_pred             eeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        417 LHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       417 ~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      ...+.|.+| +.+|||++||+.+  ...+.|.++            ...+..+ ++..+       ..||||||++... 
T Consensus        20 ~~~GSGfii-~g~IlTn~HVV~~--~~~i~V~~d------------g~~~~a~-vv~d~-------~~DlAlLkv~~~~-   75 (163)
T 2w5e_A           20 EGKGTGFFS-GNDIVTAAHVVGN--NTFVNVCYE------------GLMYEAK-VRYMP-------EKDIAFITCPGDL-   75 (163)
T ss_dssp             TEEEEEEEE-TTEEEEEHHHHTT--CSEEEEEET------------TEEEEEE-EEECC-------SSSEEEEECCTTC-
T ss_pred             ceeEEEEEE-CCEEEecHHHhCC--CceEEEEEC------------CEEEEEE-EEEEC-------CCCEEEEEecCCC-
Confidence            346889999 8999999999975  345666651            1222332 32222       4799999998632 


Q ss_pred             cCCCeeeeecCCCCCCCCCCEEEEEecc
Q psy12777        497 FQPNIIPICVPEDDTNFVGTSAHVTGWG  524 (697)
Q Consensus       497 fs~~V~PICLP~~~~~~~G~~c~VtGWG  524 (697)
                        ..+.|+.|.....   .....+.|+-
T Consensus        76 --~~~~~l~l~~~~~---~~~v~~~G~p   98 (163)
T 2w5e_A           76 --HPTARLKLSKNPD---YSCVTVMAYV   98 (163)
T ss_dssp             --CCSCCCCBCSSCC---TTEEEEEEEE
T ss_pred             --CCcceEEcCCCCC---CCEEEEEEeC
Confidence              2233455544322   3566677763

>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}

Probab=95.41  E-value=0.0086  Score=58.56  Aligned_cols=79  Identities=18%  Similarity=0.207  Sum_probs=45.0

Q ss_pred             eeee-EEEeeC---cceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCc
Q psy12777        418 HKCG-AALFNE---NWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYE  493 (697)
Q Consensus       418 ~~CG-GTLIS~---rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~  493 (697)
                      ..|. |-++.+   .+||||+||+...  ..+.+          .   ......     .  +|    -.+|||||||+.
T Consensus        14 ~~CT~Gf~v~~~~~~~ilTa~Hc~~~g--~~v~~----------~---~g~v~~-----~--~~----~~~D~Alikl~~   67 (186)
T 2pfe_A           14 YRCSIGFSVRQGSQTGFATAGHCGSTG--TRVSS----------P---SGTVAG-----S--YF----PGRDMGWVRITS   67 (186)
T ss_dssp             EEEECCEEEEETTEEEEEECGGGCCTT--CEEBT----------T---TEEEEE-----E--EC----SBSCEEEEEECT
T ss_pred             CcEEeeEEEEcCCeeEEEEChhhCCCC--CEEEE----------e---eEEEEe-----c--CC----CCCCEEEEEeCC
Confidence            4687 666754   5999999999652  22221          0   111110     0  11    146999999998


Q ss_pred             ccccCCCee-----eeecCCCCCCCCCCEEEEEe
Q psy12777        494 PVKFQPNII-----PICVPEDDTNFVGTSAHVTG  522 (697)
Q Consensus       494 PV~fs~~V~-----PICLP~~~~~~~G~~c~VtG  522 (697)
                      +....+.|+     ++.|........|+.+...|
T Consensus        68 ~~~~~~~v~~~~g~~~~i~~~~~~~vG~~vc~~G  101 (186)
T 2pfe_A           68 ADTVTPLVNRYNGGTVTVTGSQEAATGSSVCRSG  101 (186)
T ss_dssp             TSEEEEEEECSSSCEEECCBCCCCCTTCEEEEEE
T ss_pred             CcccccceeccCCceEecCCCCCCCCCCeEEEEE
Confidence            876665554     55565443333577544444

>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}

Probab=94.74  E-value=0.06  Score=52.47  Aligned_cols=81  Identities=19%  Similarity=0.207  Sum_probs=45.0

Q ss_pred             eeee-EEEee--Cc--ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecC
Q psy12777        418 HKCG-AALFN--EN--WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFY  492 (697)
Q Consensus       418 ~~CG-GTLIS--~r--wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~  492 (697)
                      ..|. |.++.  +-  |||||+||+...  .  .+.+.  +          ..-.+...    +|    -.+|||||||+
T Consensus        13 ~~CTsGf~v~~~~G~~~ilTa~Hc~~~g--~--~v~~~--d----------~~g~v~~~----~~----p~~DiAlikl~   68 (188)
T 2oua_A           13 GRCSVGFAATNASGQPGFVTAGHCGSVG--T--QVSIG--N----------GRGVFERS----VF----PGNDAAFVRGT   68 (188)
T ss_dssp             SEEECCEEEECTTCCEEEEECGGGCCTT--C--EEEET--T----------EEEEEEEE----EC----SBSCEEEEEEE
T ss_pred             CcEecCEEEEeCCCCEEEEECcccCCCC--C--EEEec--C----------ceEEEEee----CC----CCCCEEEEEeC
Confidence            4587 66775  33  999999999541  1  22221  0          11111111    12    24699999998


Q ss_pred             cccccCCCeee------eecCCCCCCCCCCEEEEEe
Q psy12777        493 EPVKFQPNIIP------ICVPEDDTNFVGTSAHVTG  522 (697)
Q Consensus       493 ~PV~fs~~V~P------ICLP~~~~~~~G~~c~VtG  522 (697)
                      .+..+.+.|++      +.|........|+.+...|
T Consensus        69 ~~~~~~~~v~~~g~~~~~~l~~~~~~~vG~~v~~~G  104 (188)
T 2oua_A           69 SNFTLTNLVSRYNSGGYATVSGSSTAPIGSQVCRSG  104 (188)
T ss_dssp             ESCEEEEEEECGGGCSEEECCBCCCCCTTCEEEEEE
T ss_pred             CCCccccceeecCCcceEeccCccCCCCCCeEEEEE
Confidence            87655554443      4565544333677655544

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=94.18  E-value=0.045  Score=54.44  Aligned_cols=40  Identities=15%  Similarity=0.159  Sum_probs=29.6

Q ss_pred             cccceEEEeeeec-ccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        573 KWPWQISLRQWIR-STYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       573 ~~Pw~~~l~~~~~-~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ..|..+.+..... .+....|.|+||+++||||||||+.+.
T Consensus        40 ~~~svV~I~~~~~~~~~~~~GsG~iI~~~~VlTaaH~v~~~   80 (237)
T 3k6y_A           40 TEPSVVKIRSLAPRCQKVLEGTGFVISPDRVMTNAHVVAGS   80 (237)
T ss_dssp             HGGGEEEEEEEEGGGTEEEEEEEEEEETTEEEECGGGTTTC
T ss_pred             hcCCEEEEEEEecCCCcceeEEEEEEECCEEEECHHHcCCC
Confidence            3566677764332 223558999999999999999999864

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=94.03  E-value=0.027  Score=58.78  Aligned_cols=39  Identities=10%  Similarity=0.081  Sum_probs=28.6

Q ss_pred             cccceEEEeeeecccceeeeeeeEeeC-cEEEeeccccccc
Q psy12777        573 KWPWQISLRQWIRSTYLHKCGAALFNE-NWAVTAAHCVEDL  612 (697)
Q Consensus       573 ~~Pw~~~l~~~~~~~~~~~CgGslI~~-~~VLSAAHC~~~~  612 (697)
                      ..|+++.|... .....++|+|+||++ +||||||||+.+.
T Consensus        15 ~~~svV~I~~~-~~~~~~~gsG~iI~~~g~ILT~aHvv~~~   54 (324)
T 1y8t_A           15 VVPSVVMLETD-LGRQSEEGSGIILSAEGLILTNNHVIAAA   54 (324)
T ss_dssp             HGGGEEEEEEE-C----CEEEEEECCTTSEEEEEHHHHTTC
T ss_pred             hcCcEEEEEEE-ccCCCceEEEEEEeCCCEEEEChHHcCCc
Confidence            36888888642 223567999999997 7999999998754

>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}

Probab=93.17  E-value=0.16  Score=50.07  Aligned_cols=99  Identities=11%  Similarity=0.033  Sum_probs=51.0

Q ss_pred             EEEEEEEecCCceeeeeEEEe---eCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCC
Q psy12777        405 QISLRQWIRSTYLHKCGAALF---NENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRT  481 (697)
Q Consensus       405 ~VsL~~~~~~~~~~~CGGTLI---S~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t  481 (697)
                      ++.|+.   ++ .|+|-|+.+   ...++||||||+.... ..+...-.......       ...++.       |....
T Consensus        18 vv~l~~---~d-~h~G~g~~V~~~G~~~LlTA~Hv~~~~~-~~~~~~k~g~~ip~-------~~~~~~-------~~~~d   78 (191)
T 1zyo_A           18 LVAIKS---GP-TTIGFGCRTKIDGEDCLLTAHHVWCNSM-RPTGLAKAGKQVSV-------EDWEIS-------MSSSD   78 (191)
T ss_dssp             EEEEEE---TT-EEEEEEEEEEC--CEEEEECHHHHTSSS-CCCEEEETTEEEEC-------CSCEEE-------EEECC
T ss_pred             EEEEEe---CC-eEEEEEEEEEECCCcEEEEChhhCcCCc-ceeeecCCCCEEEc-------ccceee-------EccCC
Confidence            566654   23 899999999   5679999999986422 11111111111100       001111       22222


Q ss_pred             CCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        482 FEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       482 ~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                      ...|||||++...+.-.-.++++-|-...   .+..+.+.|+..
T Consensus        79 ~~~D~all~vp~~~~s~lg~~~a~~~~~~---~~~~vt~yg~~~  119 (191)
T 1zyo_A           79 KMLDFAIVRVPTHVWSKLGVKSTPLVCPS---SKDVITCYGGSS  119 (191)
T ss_dssp             TTTCEEEEECCHHHHHHHTCCCCCBCCCC---SCEEEEEEEESS
T ss_pred             CCCcEEEEEcCCChhhhcCcceeEeecCC---CCccEEEEeecC
Confidence            34799999998755321112332231111   366777877744

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=92.66  E-value=0.044  Score=55.29  Aligned_cols=24  Identities=17%  Similarity=0.253  Sum_probs=21.1

Q ss_pred             eeeeeeeEeeCc-EEEeeccccccc
Q psy12777        589 LHKCGAALFNEN-WAVTAAHCVEDL  612 (697)
Q Consensus       589 ~~~CgGslI~~~-~VLSAAHC~~~~  612 (697)
                      .++|+|+||+++ ||||||||+++.
T Consensus        55 ~~~gsG~iI~~~g~ILTnaHvv~~~   79 (239)
T 1l1j_A           55 ASLGSGFIFDPEGYILTNYHVVGGA   79 (239)
T ss_dssp             EEEEEEEEEETTTEEEEEHHHHSSC
T ss_pred             CceEEEEEEeCCCEEEEChHHhCCC
Confidence            578999999985 999999998763

>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}

Probab=92.39  E-value=0.23  Score=56.26  Aligned_cols=85  Identities=19%  Similarity=0.254  Sum_probs=49.7

Q ss_pred             eeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccccc
Q psy12777        418 HKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF  497 (697)
Q Consensus       418 ~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~f  497 (697)
                      ..-.|.+|++.+|||.+|++.+  ...+.|.+-.    .      ...+..+-+...+       ..||||||++.+- +
T Consensus        74 s~GSGfiI~dG~IlTN~HVV~~--a~~i~V~~~~----d------g~~~~A~vv~~D~-------~~DLAvLkv~~~~-~  133 (539)
T 4fln_A           74 STGSAFMIGDGKLLTNAHCVEH--DTQVKVKRRG----D------DRKYVAKVLVRGV-------DCDIALLSVESED-F  133 (539)
T ss_dssp             EEEEEEEEETTEEEECGGGGTT--EEEEEEECTT----C------CCCEEEEEEEEET-------TTTEEEEEECCSS-S
T ss_pred             eEEEEEEEECCEEEEChHHcCC--CCeEEEEEcc----C------CEEEEEEEEEECC-------CCCEEEEEEeCCc-C
Confidence            3467899999999999999975  3445554310    0      1112222222333       3599999997542 2


Q ss_pred             CCCeeeeecCCCCCCCCCCEEEEEecc
Q psy12777        498 QPNIIPICVPEDDTNFVGTSAHVTGWG  524 (697)
Q Consensus       498 s~~V~PICLP~~~~~~~G~~c~VtGWG  524 (697)
                      -..+.|+.+....  ..|+.+.+.|+-
T Consensus       134 ~~~~~pl~~g~~~--~vGd~V~aiG~P  158 (539)
T 4fln_A          134 WKGAEPLRLGHLP--RLQDSVTVVGYP  158 (539)
T ss_dssp             STTCCCCCBCCCC--CTTCEEEEEECC
T ss_pred             CcCCceeecCCcC--cCCCeEEEEEcC
Confidence            2234454443322  247888888863

>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...

Probab=92.16  E-value=0.51  Score=46.25  Aligned_cols=22  Identities=27%  Similarity=0.323  Sum_probs=17.1

Q ss_pred             eeee-EEEeeC---cceeeecccccC
Q psy12777        418 HKCG-AALFNE---NWAVTAAHCVED  439 (697)
Q Consensus       418 ~~CG-GTLIS~---rwVLTAAHC~~~  439 (697)
                      ..|. |.++.+   .+||||+||+..
T Consensus        15 ~~CT~Gf~v~~~~~~~ilTa~Hc~~~   40 (198)
T 2h5c_A           15 SLCSVGFSVTRGATKGFVTAGHCGTV   40 (198)
T ss_dssp             EEEECCEEEEETTEEEEEECGGGCCT
T ss_pred             CCCCcCEEEecCCeeEEEECcccCCC
Confidence            5687 666655   599999999964

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=91.34  E-value=0.057  Score=51.43  Aligned_cols=23  Identities=26%  Similarity=0.398  Sum_probs=19.8

Q ss_pred             eeeee-eeEee---CcEEEeecccccc
Q psy12777        589 LHKCG-AALFN---ENWAVTAAHCVED  611 (697)
Q Consensus       589 ~~~Cg-GslI~---~~~VLSAAHC~~~  611 (697)
                      ...|. |.|+.   ++||||||||+++
T Consensus        11 ~~~ct~G~~v~~~~~~~vlTaaHc~~~   37 (181)
T 2sga_A           11 GSRCSLGFNVSVNGVAHALTAGHCTNI   37 (181)
T ss_dssp             TEEEECCEEEEETTEEEEEECHHHHTT
T ss_pred             CCcEeccEEEEECCceEEEECcccCCC
Confidence            35899 99998   6899999999865

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=90.99  E-value=0.15  Score=53.18  Aligned_cols=24  Identities=13%  Similarity=0.345  Sum_probs=21.5

Q ss_pred             eeeeeeeEeeCc-EEEeeccccccc
Q psy12777        589 LHKCGAALFNEN-WAVTAAHCVEDL  612 (697)
Q Consensus       589 ~~~CgGslI~~~-~VLSAAHC~~~~  612 (697)
                      .++|.|+||+++ ||||||||+.+.
T Consensus        41 ~~~gsG~iI~~~G~IlT~aHvv~~~   65 (318)
T 1te0_A           41 RTLGSGVIMDQRGYIITNKHVINDA   65 (318)
T ss_dssp             EEEEEEEECSTTCEEEEEHHHHTTC
T ss_pred             CccEEEEEEeCCCEEEECHHHcCCC
Confidence            579999999987 999999999764

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=90.36  E-value=0.097  Score=54.89  Aligned_cols=24  Identities=25%  Similarity=0.310  Sum_probs=21.3

Q ss_pred             eeeeeeeEeeCc-EEEeeccccccc
Q psy12777        589 LHKCGAALFNEN-WAVTAAHCVEDL  612 (697)
Q Consensus       589 ~~~CgGslI~~~-~VLSAAHC~~~~  612 (697)
                      ..+|.|+||+++ ||||||||+++.
T Consensus        46 ~~~gsG~iI~~~G~IlT~aHvv~~~   70 (325)
T 1lcy_A           46 ISNGSGFVVAADGLIVTNAHVVADR   70 (325)
T ss_dssp             EEEEEEEEEETTTEEEECHHHHTTC
T ss_pred             cccEEEEEEeCCCEEEECHHHcCCC
Confidence            368999999987 999999999763

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=88.64  E-value=0.34  Score=48.23  Aligned_cols=23  Identities=26%  Similarity=0.312  Sum_probs=20.5

Q ss_pred             eeeeeeEeeCc-EEEeeccccccc
Q psy12777        590 HKCGAALFNEN-WAVTAAHCVEDL  612 (697)
Q Consensus       590 ~~CgGslI~~~-~VLSAAHC~~~~  612 (697)
                      ..+.|+||+++ ||||||||+++.
T Consensus        63 ~~GSG~iI~~~G~VLTaaHvv~~~   86 (231)
T 3tjo_A           63 ASGSGFIVSEDGLIVTNAHVVTNK   86 (231)
T ss_dssp             EEEEEEECSTTCEEEEETTTCCSS
T ss_pred             ceEEEEEEeCCCEEEEchhcccCC
Confidence            57889999987 999999999864

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=88.00  E-value=0.15  Score=48.51  Aligned_cols=24  Identities=21%  Similarity=0.475  Sum_probs=19.3

Q ss_pred             eeeee-eeEee---CcEEEeeccccccc
Q psy12777        589 LHKCG-AALFN---ENWAVTAAHCVEDL  612 (697)
Q Consensus       589 ~~~Cg-GslI~---~~~VLSAAHC~~~~  612 (697)
                      .++|. |.++.   ++||||||||+.+.
T Consensus        11 ~~~ct~Gf~v~~~~~~~ilTaaHcv~~~   38 (185)
T 2qa9_E           11 TGRCSLGFNVRSGSTYYFLTAGHCTDGA   38 (185)
T ss_dssp             SCEEECCEEEEETTEEEEEECHHHHTTC
T ss_pred             CCcEeccEEEEECCceEEEECcccCCCC
Confidence            46898 88886   46999999998753

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=84.53  E-value=0.39  Score=47.78  Aligned_cols=24  Identities=13%  Similarity=0.345  Sum_probs=20.8

Q ss_pred             eeeeeeeEeeCc-EEEeeccccccc
Q psy12777        589 LHKCGAALFNEN-WAVTAAHCVEDL  612 (697)
Q Consensus       589 ~~~CgGslI~~~-~VLSAAHC~~~~  612 (697)
                      ...+-|+||+++ ||||||||+.+.
T Consensus        52 ~~~GsG~ii~~~G~IlTaaHvv~~~   76 (237)
T 3lgi_A           52 RTLGSGVIMDQRGYIITNKHVINDA   76 (237)
T ss_dssp             EEEEEEEEEETTTEEEEEHHHHTTC
T ss_pred             ceEEEEEEEeCCCEEEEeeeecCCC
Confidence            347889999987 999999999864

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=82.90  E-value=0.61  Score=48.82  Aligned_cols=24  Identities=25%  Similarity=0.324  Sum_probs=20.7

Q ss_pred             eeeeeeeEeeCc-EEEeeccccccc
Q psy12777        589 LHKCGAALFNEN-WAVTAAHCVEDL  612 (697)
Q Consensus       589 ~~~CgGslI~~~-~VLSAAHC~~~~  612 (697)
                      ...+.|+||+++ ||||||||+.+.
T Consensus        45 ~~~GSG~iI~~~G~ILTaaHvv~~~   69 (332)
T 3num_A           45 VASGSGFIVSEDGLIVTNAHVVTNK   69 (332)
T ss_dssp             EEEEEEEEEETTTEEEECTTTCCTT
T ss_pred             eeeEEEEEEeCCCEEEEChHHcCCC
Confidence            357889999987 999999999864

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=82.06  E-value=0.53  Score=49.73  Aligned_cols=24  Identities=13%  Similarity=0.188  Sum_probs=20.8

Q ss_pred             eeeeeeeEeeCc-EEEeeccccccc
Q psy12777        589 LHKCGAALFNEN-WAVTAAHCVEDL  612 (697)
Q Consensus       589 ~~~CgGslI~~~-~VLSAAHC~~~~  612 (697)
                      ...|.|+||+++ ||||||||+++.
T Consensus        52 ~g~GSG~iI~~~G~IlT~aHvv~~~   76 (348)
T 3qo6_A           52 QGSGSGFVWDKQGHIVTNYHVIRGA   76 (348)
T ss_dssp             EEEEEEEEEETTTEEEECHHHHTTC
T ss_pred             CceEEEEEEeCCCEEEECHHHhCCC
Confidence            347899999987 999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	697
d2f91a1	237	b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed c	1e-24
d2f91a1	237	b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed c	1e-13
d1elta_	236	b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxI	2e-22
d1elta_	236	b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxI	6e-14
d1eaxa_	241	b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapien	3e-22
d1eaxa_	241	b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapien	9e-13
d1rrka1	287	b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens	1e-21
d1rrka1	287	b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens	4e-11
d1pytd_	251	b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Co	1e-21
d1pytd_	251	b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Co	2e-11
g1gg6.1	238	b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(oge	2e-21
g1gg6.1	238	b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(oge	7e-13
d1fona_	232	b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III	2e-21
d1fona_	232	b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III	1e-10
d1hj8a_	222	b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon	4e-21
d1hj8a_	222	b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon	9e-16
d1ekbb_	235	b.47.1.2 (B:) Enteropeptidase (enterokinase light	7e-21
d1ekbb_	235	b.47.1.2 (B:) Enteropeptidase (enterokinase light	8e-12
g1fiw.1	274	b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries)	2e-20
g1fiw.1	274	b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries)	6e-11
d1z8ga1	255	b.47.1.2 (A:163-417) Hepsin, catalytic domain {Hum	3e-20
d1z8ga1	255	b.47.1.2 (A:163-417) Hepsin, catalytic domain {Hum	1e-12
g1h8d.1	289	b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [T	4e-20
g1h8d.1	289	b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [T	8e-13
d1gvkb_	240	b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9	5e-20
d1gvkb_	240	b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9	5e-15
d2p3ub1	233	b.47.1.2 (B:16-243) Coagulation factor Xa, proteas	5e-20
d2p3ub1	233	b.47.1.2 (B:16-243) Coagulation factor Xa, proteas	3e-13
d2fpza1	243	b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sap	2e-19
d2fpza1	243	b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sap	3e-13
d1autc_	240	b.47.1.2 (C:) Activated protein c (autoprothrombin	3e-19
d1autc_	240	b.47.1.2 (C:) Activated protein c (autoprothrombin	3e-13
d1fi8a_	227	b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus)	3e-19
d1fi8a_	227	b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus)	2e-11
g2pka.1	232	b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [T	5e-19
g2pka.1	232	b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [T	2e-12
d2qy0b1	240	b.47.1.2 (B:447-686) Complement C1R protease, cata	7e-19
d2qy0b1	240	b.47.1.2 (B:447-686) Complement C1R protease, cata	9e-13
d1j16a_	223	b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicu	8e-19
d1j16a_	223	b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicu	8e-13
d2bz6h1	254	b.47.1.2 (H:16-257) Coagulation factor VIIa {Human	9e-19
d2bz6h1	254	b.47.1.2 (H:16-257) Coagulation factor VIIa {Human	2e-11
d1xx9a_	237	b.47.1.2 (A:) Coagulation factor XI {Human (Homo s	3e-18
d1xx9a_	237	b.47.1.2 (A:) Coagulation factor XI {Human (Homo s	2e-13
d1xx9a_	237	b.47.1.2 (A:) Coagulation factor XI {Human (Homo s	0.002
d1rfna_	235	b.47.1.2 (A:) Coagulation factor IXa, protease dom	3e-18
d1rfna_	235	b.47.1.2 (A:) Coagulation factor IXa, protease dom	1e-12
d1fq3a_	227	b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [Ta	4e-18
d1fq3a_	227	b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [Ta	7e-12
d1fxya_	228	b.47.1.2 (A:) Coagulation factor Xa-trypsin chimer	4e-18
d1fxya_	228	b.47.1.2 (A:) Coagulation factor Xa-trypsin chimer	6e-13
d1lo6a_	221	b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [	7e-18
d1lo6a_	221	b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [	2e-11
d1ao5a_	237	b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus)	1e-17
d1ao5a_	237	b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus)	6e-12
d1bioa_	228	b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxI	1e-17
d1bioa_	228	b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxI	1e-12
d1npma_	225	b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [Tax	2e-17
d1npma_	225	b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [Tax	7e-12
d1npma_	225	b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [Tax	6e-04
d2z7fe1	218	b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens)	3e-17
d2z7fe1	218	b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens)	3e-12
d1brup_	241	b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9	3e-17
d1brup_	241	b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9	5e-14
d3rp2a_	224	b.47.1.2 (A:) Chymase II (mast cell proteinase II)	6e-17
d3rp2a_	224	b.47.1.2 (A:) Chymase II (mast cell proteinase II)	5e-11
d1eufa_	224	b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId:	8e-17
d1eufa_	224	b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId:	3e-10
d1rjxb_	247	b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Hum	8e-17
d1rjxb_	247	b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Hum	4e-13
g1rtf.1	260	b.47.1.2 (A:,B:) Two-chain tissue plasminogen acti	9e-17
g1rtf.1	260	b.47.1.2 (A:,B:) Two-chain tissue plasminogen acti	3e-12
d1p3ca_	215	b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus int	1e-16
d1p3ca_	215	b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus int	6e-05
d1gvza_	237	b.47.1.2 (A:) Prostate specific antigen (PSA kalli	1e-16
d1gvza_	237	b.47.1.2 (A:) Prostate specific antigen (PSA kalli	9e-13
d1q3xa1	242	b.47.1.2 (A:445-686) Mannan-binding lectin serine	2e-16
d1q3xa1	242	b.47.1.2 (A:445-686) Mannan-binding lectin serine	4e-12
d1sgfa_	228	b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus	3e-16
d1sgfa_	228	b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus	4e-08
d1orfa_	232	b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [Ta	3e-16
d1orfa_	232	b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [Ta	2e-13
d1op0a_	234	b.47.1.2 (A:) Venom serine protease {Hundred-pace	4e-16
d1op0a_	234	b.47.1.2 (A:) Venom serine protease {Hundred-pace	4e-12
d1eq9a_	222	b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Re	5e-16
d1eq9a_	222	b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Re	2e-12
d1nn6a_	224	b.47.1.2 (A:) Chymase (mast cell protease I) {Huma	6e-16
d1nn6a_	224	b.47.1.2 (A:) Chymase (mast cell protease I) {Huma	1e-10
d1fuja_	221	b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapie	6e-16
d1fuja_	221	b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapie	3e-11
d1hj9a_	223	b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [Tax	7e-16
d1hj9a_	223	b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [Tax	2e-12
d1elva1	259	b.47.1.2 (A:410-668) Complement C1S protease, cata	9e-16
d1elva1	259	b.47.1.2 (A:410-668) Complement C1S protease, cata	2e-11
d1tona_	235	b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 1	1e-15
d1tona_	235	b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 1	2e-12
d1a7sa_	225	b.47.1.2 (A:) Heparin binding protein, HBP {Human	1e-15
d1a7sa_	225	b.47.1.2 (A:) Heparin binding protein, HBP {Human	4e-12
d1mzaa_	240	b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [Ta	1e-15
d1mzaa_	240	b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [Ta	1e-13
d1m9ua_	241	b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [Tax	3e-15
d1m9ua_	241	b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [Tax	7e-13
g1gj7.1	256	b.47.1.2 (A:,B:) Urokinase-type plasminogen activa	9e-15
g1gj7.1	256	b.47.1.2 (A:,B:) Urokinase-type plasminogen activa	2e-12
d1gdna_	224	b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxyspo	1e-14
d1gdna_	224	b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxyspo	3e-12
d1t32a1	224	b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapie	1e-14
d1t32a1	224	b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapie	5e-10
d1azza_	226	b.47.1.2 (A:) Crab collagenase {Atlantic sand fidd	2e-14
d1azza_	226	b.47.1.2 (A:) Crab collagenase {Atlantic sand fidd	6e-12
d1si5h_	234	b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human	4e-14
d1si5h_	234	b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human	1e-09
d1os8a_	223	b.47.1.1 (A:) Trypsin {Streptomyces griseus, strai	3e-13
d1os8a_	223	b.47.1.1 (A:) Trypsin {Streptomyces griseus, strai	9e-13
d2hlca_	230	b.47.1.2 (A:) HL collagenase {Common cattle grub (	2e-12
d2hlca_	230	b.47.1.2 (A:) HL collagenase {Common cattle grub (	7e-12
d1arba_	263	b.47.1.1 (A:) Achromobacter protease {Achromobacte	1e-11
d1agja_	242	b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A	2e-05
d1qtfa_	246	b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus	0.002

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

 Score =  100 bits (250), Expect = 1e-24
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 4/170 (2%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV-EDVPPSDLLLRL 449
           IVGG  AT G++P+Q+S ++       H CGA+++NEN+A+TA HCV  D   +   L++
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQI 60

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
              +L         Q   V  +  H  FD    + D++LL+    + F  N+ PI +PE 
Sbjct: 61  VAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQ 120

Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM--ATCWNHFLGNRIL 557
                G    VTGWG   EG          T   +    C   +  + IL
Sbjct: 121 GHTATGD-VIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEIL 169

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

 Score = 68.9 bits (167), Expect = 1e-13
 Identities = 24/71 (33%), Positives = 37/71 (52%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG  AT G++P+Q+S ++       H CGA+++NEN+A+TA HCV     +    +Q 
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQI 60

Query: 623 CRRRESNLWKM 633
                      
Sbjct: 61  VAGELDMSVNE 71

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]} Length = 236

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

 Score = 94.5 bits (233), Expect = 2e-22
 Identities = 53/201 (26%), Positives = 78/201 (38%), Gaps = 5/201 (2%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG  A    WPWQISL+    S+Y H CG +L  + W +TAAHCV+        + LG
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSARTWR--VVLG 58

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE-D 509
           EH+L+T E            + S    D     YD+ALLR          +    +P  +
Sbjct: 59  EHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSN 118

Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM--ATCWNHFLGNRILFPSSRIVGGE 567
                    ++TGWG+   G         A    +  ATC +       +  +    GG 
Sbjct: 119 QILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGG 178

Query: 568 KATFGKWPWQISLRQWIRSTY 588
             +         L   +  +Y
Sbjct: 179 ANSGCNGDSGGPLNCQVNGSY 199

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]} Length = 236

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

 Score = 69.8 bits (169), Expect = 6e-14
 Identities = 24/51 (47%), Positives = 31/51 (60%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           +VGG  A    WPWQISL+    S+Y H CG +L  + W +TAAHCV+   
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSAR 51

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.0 bits (232), Expect = 3e-22
 Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 9/141 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED-----VPPSDL 445
           +VGG  A  G+WPWQ+SL         H CGA+L + NW V+AAHC  D           
Sbjct: 1   VVGGTDADEGEWPWQVSLH---ALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQ 57

Query: 446 LLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC 505
                     ++    G QERR++ + SHP F+  TF+YD+ALL   +P ++   + PIC
Sbjct: 58  WTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPIC 117

Query: 506 VPEDDTNFVG-TSAHVTGWGR 525
           +P+    F    +  VTGWG 
Sbjct: 118 LPDASHVFPAGKAIWVTGWGH 138

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (160), Expect = 9e-13
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           +VGG  A  G+WPWQ+SL         H CGA+L + NW V+AAHC  D
Sbjct: 1   VVGGTDADEGEWPWQVSLH---ALGQGHICGASLISPNWLVSAAHCYID 46

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 287

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.6 bits (231), Expect = 1e-21
 Identities = 30/156 (19%), Positives = 54/156 (34%), Gaps = 8/156 (5%)

Query: 394 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEH 452
            +   + K PWQ  +     S     C  A+ +E + +TAAHC         + + +G  
Sbjct: 8   RKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGE 67

Query: 453 DLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN 512
               E E          I        P  ++YD+AL++    +K+   I PIC+P  +  
Sbjct: 68  KRDLEIEVV-LFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGT 126

Query: 513 F------VGTSAHVTGWGRLYEGRFRRSYGHPATRQ 542
                    T+        L     +  +     ++
Sbjct: 127 TRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKK 162

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 287

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (150), Expect = 4e-11
 Identities = 13/46 (28%), Positives = 20/46 (43%)

Query: 566 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
            +   + K PWQ  +     S     C  A+ +E + +TAAHC   
Sbjct: 8   RKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV 53

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 251

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 92.5 bits (228), Expect = 1e-21
 Identities = 54/194 (27%), Positives = 81/194 (41%), Gaps = 9/194 (4%)

Query: 381 CGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 437
           CG  +F    S+R+VGGE A    WPWQISL+    +T+ H CG  L   N  +TAAHC+
Sbjct: 1   CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60

Query: 438 EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF 497
            +     + L     +    E+  G     V  +  H +++      D+AL++  E V+ 
Sbjct: 61  SNTLTYRVALGKNNLE---VEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVEL 117

Query: 498 QPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRF--RRSYGHPATRQEMATCWNHFLGN 554
              I   C+P + +         VTGWGRLY                 + ATC       
Sbjct: 118 GDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWG 177

Query: 555 RILFPSSRIVGGEK 568
             +  +    GG+ 
Sbjct: 178 TTVKETMVCAGGDG 191

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 251

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.9 bits (151), Expect = 2e-11
 Identities = 27/75 (36%), Positives = 40/75 (53%)

Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIP 618
            S+R+VGGE A    WPWQISL+    +T+ H CG  L   N  +TAAHC+ +  +  + 
Sbjct: 10  LSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNTLTYRVA 69

Query: 619 IIQNCRRRESNLWKM 633
           + +N    E     +
Sbjct: 70  LGKNNLEVEDEAGSL 84

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 91.3 bits (225), Expect = 2e-21
 Identities = 38/184 (20%), Positives = 63/184 (34%), Gaps = 7/184 (3%)

Query: 402 WPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPY 461
           W WQ+SL+      + H CG +L   +W VTA HC+         + LGE+D S  E   
Sbjct: 2   WSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST--SRTYQVVLGEYDRSVLEGSE 59

Query: 462 GYQERRVQIVASHPQFDPRTFEYD--LALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSA 518
                    +  HP ++         +AL++     +    +    +P            
Sbjct: 60  QVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPC 119

Query: 519 HVTGWGRLYEGRFRRSYGHPATRQEM--ATCWNHFLGNRILFPSSRIVGGEKATFGKWPW 576
           +++GWGRLY G         A    +    C         +  +    GG+  +      
Sbjct: 120 YISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCNGDS 179

Query: 577 QISL 580
              L
Sbjct: 180 GGPL 183

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.1 bits (144), Expect = 1e-10
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 574 WPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           W WQ+SL+      + H CG +L   +W VTA HC+  
Sbjct: 2   WSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST 39

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

 Score = 90.4 bits (223), Expect = 4e-21
 Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 14/166 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +      P Q+SL         H CG +L NENW V+AAHC +         RLG
Sbjct: 1   IVGGYECKAYSQPHQVSLNSGY-----HFCGGSLVNENWVVSAAHCYKSRVEV----RLG 51

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH++   E    +      I   HP +     + D+ L++  +P      + P+ +P   
Sbjct: 52  EHNIKVTEGSEQFISSSRVIR--HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSC 109

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPAT--RQEMATCWNHFLGN 554
               GT   V+GWG         +            + C N + G 
Sbjct: 110 A-PAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGM 154

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

 Score = 74.6 bits (182), Expect = 9e-16
 Identities = 41/185 (22%), Positives = 58/185 (31%), Gaps = 67/185 (36%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED----------- 611
           IVGG +      P Q+SL         H CG +L NENW V+AAHC +            
Sbjct: 1   IVGGYECKAYSQPHQVSLNSGY-----HFCGGSLVNENWVVSAAHCYKSRVEVRLGEHNI 55

Query: 612 -------------------------------LWSQIIPIIQNCRRRESNLWKMALADGPL 640
                                          L     P   N   +   L       G +
Sbjct: 56  KVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAPAGTM 115

Query: 641 PSV---------------LQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFD 685
            +V               LQ +++P+++ S C   Y        I     CAG+ +G  D
Sbjct: 116 CTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYP-----GMITNAMFCAGYLEGGKD 170

Query: 686 SCEEH 690
           SC+  
Sbjct: 171 SCQGD 175

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 90.1 bits (222), Expect = 7e-21
 Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 10/166 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLR 448
           IVGG  +  G WPW ++L    +      CGA+L + +W V+AAHCV    + PS     
Sbjct: 1   IVGGSDSREGAWPWVVALYFDDQ----QVCGASLVSRDWLVSAAHCVYGRNMEPSKWKAV 56

Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
           LG H  S    P   + R +  +  +P ++ R    D+A++     V +   I PIC+PE
Sbjct: 57  LGLHMASNLTSPQ-IETRLIDQIVINPHYNKRRKNNDIAMMHLEMKVNYTDYIQPICLPE 115

Query: 509 DDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPAT--RQEMATCWNHF 551
           ++  F  G    + GWG L            A         C    
Sbjct: 116 ENQVFPPGRICSIAGWGALIYQGSTADVLQEADVPLLSNEKCQQQM 161

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 63.5 bits (153), Expect = 8e-12
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG  +  G WPW ++L    +      CGA+L + +W V+AAHCV     +       
Sbjct: 1   IVGGSDSREGAWPWVVALYFDDQ----QVCGASLVSRDWLVSAAHCVYGRNMEPSKWKAV 56

Query: 623 CRRR 626
               
Sbjct: 57  LGLH 60

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 255

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (218), Expect = 3e-20
 Identities = 47/187 (25%), Positives = 70/187 (37%), Gaps = 15/187 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG   + G+WPWQ+SLR        H CG +L + +W +TAAHC  +   + +L R  
Sbjct: 1   IVGGRDTSLGRWPWQVSLR----YDGAHLCGGSLLSGDWVLTAAHCFPE--RNRVLSRWR 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQ------FDPRTFEYDLALLRFYEPVKFQPNIIPI 504
               +  +      +  VQ V  H         +      D+AL+    P+     I P+
Sbjct: 55  VFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPV 114

Query: 505 CVPEDDTNFV-GTSAHVTGWGRLYEGRFRRSYGHPATRQEM--ATCWNHFLGNRILFPSS 561
           C+P      V G    VTGWG       +      A    +    C         + P  
Sbjct: 115 CLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKM 174

Query: 562 RIVGGEK 568
              G  +
Sbjct: 175 FCAGYPE 181

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 255

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (161), Expect = 1e-12
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG   + G+WPWQ+SLR        H CG +L + +W +TAAHC  +    +      
Sbjct: 1   IVGGRDTSLGRWPWQVSLR----YDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVF 56

Query: 623 CRRRESNLWKM 633
                      
Sbjct: 57  AGAVAQASPHG 67

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 87.5 bits (215), Expect = 5e-20
 Identities = 48/202 (23%), Positives = 75/202 (37%), Gaps = 6/202 (2%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+        + +G
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFR--VVVG 58

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+L+       Y   +  +V  +   D     YD+ALLR  + V     +    +P   
Sbjct: 59  EHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAG 118

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATR---QEMATCWNHFLGNRILFPSSRIVGGE 567
           T     S        L     + +           + A C +       +  S    GG+
Sbjct: 119 TILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGD 178

Query: 568 KAT-FGKWPWQISLRQWIRSTY 588
                 +      L   +   Y
Sbjct: 179 GVRSGCQGDSGGPLHCLVNGQY 200

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 73.3 bits (178), Expect = 5e-15
 Identities = 23/71 (32%), Positives = 39/71 (54%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           +VGG +A    WP QISL+    S++ H CG  L  +NW +TAAHCV+   +  + + ++
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEH 60

Query: 623 CRRRESNLWKM 633
              + +   + 
Sbjct: 61  NLNQNNGTEQY 71

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 233

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.5 bits (215), Expect = 5e-20
 Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 7/161 (4%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++   G+ PWQ  L           CG  + +E + +TAAHC+          ++ 
Sbjct: 1   IVGGQECKDGECPWQALLIN---EENEGFCGGTILSEFYILTAAHCLYQAKRF----KVR 53

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P C+PE D
Sbjct: 54  VGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHF 551
                     TG    +     +       +       +  
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRN 154

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 233

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (163), Expect = 3e-13
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG++   G+ PWQ  L           CG  + +E + +TAAHC+       + +   
Sbjct: 1   IVGGQECKDGECPWQALLIN---EENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDR 57

Query: 623 CRRRESNLWKM 633
              +E     +
Sbjct: 58  NTEQEEGGEAV 68

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.3 bits (212), Expect = 2e-19
 Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG++A   KWPWQ+SL +     ++H CG +L +  W +TAAHCV         LR+ 
Sbjct: 1   IVGGQEAPRSKWPWQVSL-RVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQ 59

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             +   +   Y  Q   V  +  HPQF       D+ALL   EPVK   ++  + +P   
Sbjct: 60  LRE---QHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPAS 116

Query: 511 TNF-VGTSAHVTGWGRLYEG 529
             F  G    VTGWG +   
Sbjct: 117 ETFPPGMPCWVTGWGDVDND 136

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (164), Expect = 3e-13
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI 619
           IVGG++A   KWPWQ+SL +     ++H CG +L +  W +TAAHCV      +  +
Sbjct: 1   IVGGQEAPRSKWPWQVSL-RVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAAL 56

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (210), Expect = 3e-19
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 12/144 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++ G+    G  PWQ+ L     S     CGA L + +W +TAAHC+++     LL+RLG
Sbjct: 1   LIDGKMTRRGDSPWQVVLL---DSKKKLACGAVLIHPSWVLTAAHCMDE--SKKLLVRLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E+DL          +  ++ V  HP +   T + D+ALL   +P      I+PIC+P+  
Sbjct: 56  EYDLRR--WEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSG 113

Query: 511 -----TNFVGTSAHVTGWGRLYEG 529
                 N  G    VTGWG     
Sbjct: 114 LAERELNQAGQETLVTGWGYHSSR 137

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (164), Expect = 3e-13
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           ++ G+    G  PWQ+ L     S     CGA L + +W +TAAHC+++    ++ + + 
Sbjct: 1   LIDGKMTRRGDSPWQVVLL---DSKKKLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEY 57

Query: 623 CRR 625
             R
Sbjct: 58  DLR 60

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 84.8 bits (208), Expect = 3e-19
 Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 9/164 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+   L+     +   KCG  L  E++ +TAAHC              
Sbjct: 1   IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHCSGSKIQVT------ 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
               + +E+    Q   V  +  HP ++ +T   D+ LL+     K    + P+ +P  +
Sbjct: 55  LGAHNIKEQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRN 114

Query: 511 TNF-VGTSAHVTGWGRLYEGRFRRSYGHPAT--RQEMATCWNHF 551
                G   +V GWG+L                 QE   C ++ 
Sbjct: 115 VKVKPGDVCYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCESYL 158

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.4 bits (150), Expect = 2e-11
 Identities = 16/71 (22%), Positives = 27/71 (38%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           I+GG +A     P+   L+     +   KCG  L  E++ +TAAHC        +     
Sbjct: 1   IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHCSGSKIQVTLGAHNI 60

Query: 623 CRRRESNLWKM 633
             + +      
Sbjct: 61  KEQEKMQQIIP 71

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (207), Expect = 7e-19
 Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 12/167 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED-----VPPSDL 445
           I+GG+KA  G +PWQ+            + G AL  + W +TAAH +          + L
Sbjct: 1   IIGGQKAKMGNFPWQVFTN------IHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASL 54

Query: 446 LLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC 505
            + LG  ++    +   +  RRV +   + Q +   FE D+ALL     V   PN++PIC
Sbjct: 55  DVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPIC 114

Query: 506 VPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHF 551
           +P++DT + +G   +V+G+G + E                  C N  
Sbjct: 115 LPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWL 161

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (160), Expect = 9e-13
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQI 616
           I+GG+KA  G +PWQ+            + G AL  + W +TAAH +     + 
Sbjct: 1   IIGGQKAKMGNFPWQVFTN------IHGRGGGALLGDRWILTAAHTLYPKEHEA 48

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 83.5 bits (205), Expect = 8e-19
 Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 12/144 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL         H CG +L N+ W V+AAHC +         RLG
Sbjct: 1   IVGGYTCQENSVPYQVSLNSGY-----HFCGGSLINDQWVVSAAHCYKSRIQV----RLG 51

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           EH+++  E    +      I   HP FD  T+  D+ L++   PVK    +  + +P   
Sbjct: 52  EHNINVLEGNEQFVNAAKIIK--HPNFDRETYNNDIMLIKLSSPVKLNARVATVALPSSC 109

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRS 534
               GT   ++GWG          
Sbjct: 110 A-PAGTQCLISGWGNTLSSGVNEP 132

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.2 bits (160), Expect = 8e-13
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 5/71 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG        P+Q+SL         H CG +L N+ W V+AAHC +      +     
Sbjct: 1   IVGGYTCQENSVPYQVSLNSGY-----HFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNI 55

Query: 623 CRRRESNLWKM 633
                +  +  
Sbjct: 56  NVLEGNEQFVN 66

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (207), Expect = 9e-19
 Identities = 53/195 (27%), Positives = 81/195 (41%), Gaps = 14/195 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRL 449
           IVGG+    G+ PWQ+ L           CG  L N  W V+AAHC + +    +L+  L
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGA----QLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVL 56

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           GEHDLS  +     Q RRV  V     + P T  +D+ALLR ++PV    +++P+C+PE 
Sbjct: 57  GEHDLSEHD--GDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPER 114

Query: 510 D----TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMAT---CWNHFLGNRILFPSSR 562
                T      + V+GWG+L +               + T                +  
Sbjct: 115 TFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEY 174

Query: 563 IVGGEKATFGKWPWQ 577
           +     +   K   +
Sbjct: 175 MFCAGYSDGSKDSCK 189

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (151), Expect = 2e-11
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
           IVGG+    G+ PWQ+ L           CG  L N  W V+AAHC + + +
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGA----QLCGGTLINTIWVVSAAHCFDKIKN 48

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (202), Expect = 3e-18
 Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 3/134 (2%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   V     +LR+ 
Sbjct: 1   IVGGTASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPK-ILRVY 58

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI-CVPED 509
              L+  E         VQ +  H Q+      YD+ALL+    V +  +  PI    + 
Sbjct: 59  SGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKG 118

Query: 510 DTNFVGTSAHVTGW 523
           D N + T   VTGW
Sbjct: 119 DRNVIYTDCWVTGW 132

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (165), Expect = 2e-13
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG  +  G+WPWQ++L      T  H CG ++    W +TAAHC   + S  I  + +
Sbjct: 1   IVGGTASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59

Query: 623 CRRRESNLWKMA 634
               +S + +  
Sbjct: 60  GILNQSEIKEDT 71

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 12/126 (9%)

Query: 573 KWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWK 632
           +     S           +   A    + A+       +      PI    +   + ++ 
Sbjct: 66  EIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYT 125

Query: 633 MALADGP--------LPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSF 684
                G         + + LQ+  +P++ N  C+  YR       I    ICAG+R+G  
Sbjct: 126 DCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRG----HKITHKMICAGYREGGK 181

Query: 685 DSCEEH 690
           D+C+  
Sbjct: 182 DACKGD 187

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (202), Expect = 3e-18
 Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 11/190 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A  G++PWQ+ L           CG ++ NE W VTAAHCVE      + +  G
Sbjct: 1   VVGGEDAKPGQFPWQVVLN----GKVDAFCGGSIVNEKWIVTAAHCVET--GVKITVVAG 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC---VP 507
           EH++   E     +     I   +       + +D+ALL   EP+     + PIC     
Sbjct: 55  EHNIEETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKE 114

Query: 508 EDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGE 567
             +      S +V+GWGR++                +            ++ +    G  
Sbjct: 115 YTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTIYNNMFCAGFH 174

Query: 568 KATFGKWPWQ 577
           +   G+   Q
Sbjct: 175 EG--GRDSCQ 182

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (159), Expect = 1e-12
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           +VGGE A  G++PWQ+ L           CG ++ NE W VTAAHCVE      +   ++
Sbjct: 1   VVGGEDAKPGQFPWQVVLN----GKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEH 56

Query: 623 CRRRESNLWKM 633
                 +  + 
Sbjct: 57  NIEETEHTEQK 67

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.7 bits (200), Expect = 4e-18
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 8/151 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+   L  W + +   +CG  L  +++ +TAAHC              
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSL-KRCGGFLIQDDFVLTAAHCWGSSINVT------ 53

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
               + +E+    Q   V+    HP ++P+ F  D+ LL+     K    + P+ +P + 
Sbjct: 54  LGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNK 113

Query: 511 TNF-VGTSAHVTGWGRLYEGRFRRSYGHPAT 540
                G +  V GWG+               
Sbjct: 114 AQVKPGQTCSVAGWGQTAPLGKHSHTLQEVK 144

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (153), Expect = 7e-12
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           I+GG +A     P+   L  W + +   +CG  L  +++ +TAAHC     +  +     
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSL-KRCGGFLIQDDFVLTAAHCWGSSINVTLGAHNI 59

Query: 623 CRRRESNLWKM 633
             +  +  +  
Sbjct: 60  KEQEPTQQFIP 70

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

 Score = 81.7 bits (200), Expect = 4e-18
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG     G+ PWQ  L           CG  + +E + +TAAHC+          ++ 
Sbjct: 1   IVGGYNCKDGEVPWQALLI---NEENEGFCGGTILSEFYILTAAHCLYQAKRF----KVR 53

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
             D +TE+E  G     V++V  H +F   T+++D+A+LR   P+ F+ N+ P  +P   
Sbjct: 54  VGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAP 113

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRS 534
                T   ++GWG          
Sbjct: 114 PATG-TKCLISGWGNTASSGADYP 136

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

 Score = 66.6 bits (161), Expect = 6e-13
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG     G+ PWQ  L           CG  + +E + +TAAHC+       + +   
Sbjct: 1   IVGGYNCKDGEVPWQALLI---NEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDR 57

Query: 623 CRRRESNLWKM 633
              +E     +
Sbjct: 58  NTEQEEGGEAV 68

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (198), Expect = 7e-18
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 11/137 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +V G        P+Q +L     ++    CG  L +  W +TAAHC       +L + LG
Sbjct: 1   LVHGGPCDKTSHPYQAALY----TSGHLLCGGVLIHPLWVLTAAHCK----KPNLQVFLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           +H+L   E           ++  HP +D  + + D+ LLR   P K    I P+ +  D 
Sbjct: 53  KHNLRQRESSQEQSSVVRAVI--HPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDC 110

Query: 511 TNFVGTSAHVTGWGRLY 527
           +    TS H+ GWG+  
Sbjct: 111 S-ANTTSCHILGWGKTA 126

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (150), Expect = 2e-11
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           +V G        P+Q +L     ++    CG  L +  W +TAAHC +   
Sbjct: 1   LVHGGPCDKTSHPYQAALY----TSGHLLCGGVLIHPLWVLTAAHCKKPNL 47

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.9 bits (198), Expect = 1e-17
 Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 13/172 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED-----VPPSDL 445
           +VGG        PWQ+++         H CG  L + NW +TAAHC  D     +  + L
Sbjct: 1   VVGGFNCEKNSQPWQVAVYYQKE----HICGGVLLDRNWVLTAAHCYVDQYEVWLGKNKL 56

Query: 446 LLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC 505
                        + + +    + ++          F  DL LLR  +P      + PI 
Sbjct: 57  FQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIA 116

Query: 506 VPEDDTNFVGTSAHVTGWGRLYEGRFRRS---YGHPATRQEMATCWNHFLGN 554
           +P  +     +    +GWG +   R+++         T      C   +L  
Sbjct: 117 LPTKEPKPG-SKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQK 167

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.9 bits (154), Expect = 6e-12
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           +VGG        PWQ+++         H CG  L + NW +TAAHC  D +
Sbjct: 1   VVGGFNCEKNSQPWQVAVYYQKE----HICGGVLLDRNWVLTAAHCYVDQY 47

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (197), Expect = 1e-17
 Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 7/139 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+  S++        H CG  L  E W ++AAHC+ED     + + LG
Sbjct: 1   ILGGREAEAHARPYMASVQ----LNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED- 509
            H LS  E     +   V     HP   P T ++DL LL+  E     P + P+      
Sbjct: 57  AHSLSQPEPS--KRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVD 114

Query: 510 DTNFVGTSAHVTGWGRLYE 528
                GT   V GWG +  
Sbjct: 115 RDVAPGTLCDVAGWGIVNH 133

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (159), Expect = 1e-12
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           I+GG +A     P+  S++        H CG  L  E W ++AAHC+ED     + ++  
Sbjct: 1   ILGGREAEAHARPYMASVQ----LNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLG 56

Query: 623 CRRRESNLWKM 633
                      
Sbjct: 57  AHSLSQPEPSK 67

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.3 bits (194), Expect = 2e-17
 Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 10/145 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G +      PWQ +L Q  R      CG  L  + W +TAAHC +         RLG
Sbjct: 1   ILEGRECIPHSQPWQAALFQGER----LICGGVLVGDRWVLTAAHCKKQKYSV----RLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASH-PQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
           +H L + ++P    +    I        +P    +D+ L+R          + P+ +   
Sbjct: 53  DHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANL 112

Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRS 534
                G    ++GWG +   +    
Sbjct: 113 CPKV-GQKCIISGWGTVTSPQENFP 136

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.5 bits (153), Expect = 7e-12
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           I+ G +      PWQ +L Q  R      CG  L  + W +TAAHC +  +S  +     
Sbjct: 1   ILEGRECIPHSQPWQAALFQGER----LICGGVLVGDRWVLTAAHCKKQKYSVRLGDHSL 56

Query: 623 CRRRESNLWKM 633
             R +      
Sbjct: 57  QSRDQPEQEIQ 67

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.6 bits (91), Expect = 6e-04
 Identities = 22/143 (15%), Positives = 39/143 (27%), Gaps = 6/143 (4%)

Query: 545 ATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVT 604
           A C       R+   S +     +                 +   H     L     +  
Sbjct: 40  AHCKKQKYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSAN 99

Query: 605 AAHCVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAA 664
               V+ +    +      +   S    +       P+ L    V + + + CE  Y   
Sbjct: 100 LGDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPG- 158

Query: 665 GFIEHIPEIFICAGWRKGSFDSC 687
                I E  +CAG   G+ D+C
Sbjct: 159 ----KITEGMVCAGSSNGA-DTC 176

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]} Length = 218

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (193), Expect = 3e-17
 Identities = 39/162 (24%), Positives = 60/162 (37%), Gaps = 8/162 (4%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP+ +SL+        H CGA L   N+ ++AAHCV +V    + + LG
Sbjct: 1   IVGGRRARPHAWPFMVSLQ----LRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC-VPED 509
            H+LS  E     ++           +DP     D+ +L+         N+       + 
Sbjct: 57  AHNLSRREP---TRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQG 113

Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHF 551
                G      GWG L   R   S         + +     
Sbjct: 114 RRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVVTSLCRRS 155

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]} Length = 218

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (155), Expect = 3e-12
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG +A    WP+ +SL+        H CGA L   N+ ++AAHCV ++  + + ++  
Sbjct: 1   IVGGRRARPHAWPFMVSLQ----LRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLG 56

Query: 623 CRRRESNLWKM 633
                      
Sbjct: 57  AHNLSRREPTR 67

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 79.5 bits (194), Expect = 3e-17
 Identities = 51/180 (28%), Positives = 73/180 (40%), Gaps = 5/180 (2%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGGE A    WPWQ+SL+      + H CG  L +++W +TAAHC+         + LG
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS--SSRTYRVVLG 58

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H LST E      +    +V      +  +   D+ALL+   PV     I   C+P   
Sbjct: 59  RHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAG 118

Query: 511 TNFVG-TSAHVTGWGRLYEGRFRRSYGHPATRQEM--ATCWNHFLGNRILFPSSRIVGGE 567
           T        +VTGWGRL                 +  ATC         +  +    GG+
Sbjct: 119 TILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGD 178

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 70.2 bits (170), Expect = 5e-14
 Identities = 21/66 (31%), Positives = 35/66 (53%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           +VGGE A    WPWQ+SL+      + H CG  L +++W +TAAHC+    +  + + ++
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSRTYRVVLGRH 60

Query: 623 CRRRES 628
                 
Sbjct: 61  SLSTNE 66

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 78.2 bits (191), Expect = 6e-17
 Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 7/139 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG ++     P+   L           CG  L +  + +TAAHC       ++ + LG
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHC----KGREITVILG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED- 509
            HD+   E     Q+ +V+    H  ++     +D+ LL+  + V+  P +  + +P   
Sbjct: 57  AHDVRKRE--STQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPS 114

Query: 510 DTNFVGTSAHVTGWGRLYE 528
           D    G      GWG+   
Sbjct: 115 DFIHPGAMCWAAGWGKTGV 133

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 60.9 bits (146), Expect = 5e-11
 Identities = 13/52 (25%), Positives = 21/52 (40%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
           I+GG ++     P+   L           CG  L +  + +TAAHC     +
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGREIT 52

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.9 bits (190), Expect = 8e-17
 Identities = 37/164 (22%), Positives = 53/164 (32%), Gaps = 10/164 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +A     P+   L  +  S   H CG  L  E++ +TAAHC+             
Sbjct: 1   IIGGHEAKPHSRPYMAFL-LFKTSGKSHICGGFLVREDFVLTAAHCLGSSINVT------ 53

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC-VPED 509
               +  E     Q   V+    HP ++  T   D+ LL+          + PI      
Sbjct: 54  LGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSL 113

Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM--ATCWNHF 551
                G    V GWGRL               +      C   F
Sbjct: 114 AEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARF 157

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.6 bits (140), Expect = 3e-10
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           I+GG +A     P+   L  +  S   H CG  L  E++ +TAAHC+    
Sbjct: 1   IIGGHEAKPHSRPYMAFL-LFKTSGKSHICGGFLVREDFVLTAAHCLGSSI 50

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 247

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (192), Expect = 8e-17
 Identities = 42/203 (20%), Positives = 61/203 (30%), Gaps = 18/203 (8%)

Query: 381 CGRRLF----PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 436
           CG+           +VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC
Sbjct: 4   CGKPQVEPKKCPGAVVGGCVAYPHSWPWQVSLR---TRFGMHFCGGTLISPEWVLTAAHC 60

Query: 437 VEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK 496
           +E  P                                  +        D+ALL+   P  
Sbjct: 61  LEKSPRPS-------SYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAV 113

Query: 497 FQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM--ATCWNHFLGN 554
               +IP C+P  +      +          +G F       A    +    C  +   N
Sbjct: 114 ITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLMEAQLPVIENKVCNRYEFLN 173

Query: 555 RILFPSSRIVGGEKATFGKWPWQ 577
             +  +    G      G    Q
Sbjct: 174 GRVQSTELCAGHLAG--GTDSCQ 194

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 247

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (163), Expect = 4e-13
 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIP 618
               +VGG  A    WPWQ+SLR       +H CG  L +  W +TAAHC+E        
Sbjct: 14  CPGAVVGGCVAYPHSWPWQVSLR---TRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSY 70

Query: 619 IIQNCRRRESNLW 631
            +     +E NL 
Sbjct: 71  KVILGAHQEVNLE 83

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]} Length = 215

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

 Score = 77.5 bits (189), Expect = 1e-16
 Identities = 21/166 (12%), Positives = 42/166 (25%), Gaps = 11/166 (6%)

Query: 391 IVGG-----EKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDL 445
           +V G     + A     P+               C   L   N  +T  HCV +      
Sbjct: 1   VVIGDDGRTKVANTRVAPYNSIAYITFGG---SSCTGTLIAPNKILTNGHCVYNTASRSY 57

Query: 446 LLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPIC 505
             +   +    +           +        +    +YD A+++    +        I 
Sbjct: 58  SAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNIGNTVGYRSIR 117

Query: 506 VPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHF 551
                TN  GT+  ++G+         +      +        N  
Sbjct: 118 ---QVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTNLA 160

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]} Length = 215

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

 Score = 42.4 bits (98), Expect = 6e-05
 Identities = 12/73 (16%), Positives = 21/73 (28%), Gaps = 8/73 (10%)

Query: 563 IVGG-----EKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQII 617
           +V G     + A     P+               C   L   N  +T  HCV +  S+  
Sbjct: 1   VVIGDDGRTKVANTRVAPYNSIAYITFGG---SSCTGTLIAPNKILTNGHCVYNTASRSY 57

Query: 618 PIIQNCRRRESNL 630
               +     ++ 
Sbjct: 58  SAKGSVYPGMNDS 70

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 77.4 bits (189), Expect = 1e-16
 Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 18/147 (12%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG +      PWQ+++          +CG  L +  W +TAAHC+ D         LG
Sbjct: 1   IIGGWECEKHSKPWQVAVYHQGH----FQCGGVLVHPQWVLTAAHCMSDDYQI----WLG 52

Query: 451 EHDLSTEEEPYGYQERR---------VQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNI 501
            H+LS +E+   + +           + ++            +DL LLR  +P +    +
Sbjct: 53  RHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAV 112

Query: 502 IPICVPEDDTNFVGTSAHVTGWGRLYE 528
             + +P  +     ++ + +GWG +  
Sbjct: 113 KILDLPTQEPKLG-STCYTSGWGLIST 138

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 66.3 bits (160), Expect = 9e-13
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           I+GG +      PWQ+++          +CG  L +  W +TAAHC+ D +   +     
Sbjct: 1   IIGGWECEKHSKPWQVAVYHQGH----FQCGGVLVHPQWVLTAAHCMSDDYQIWLGRHNL 56

Query: 623 CRRRESNLWKM 633
            +  ++  +  
Sbjct: 57  SKDEDTAQFHQ 67

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 242

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (188), Expect = 2e-16
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I GG+KA  G +PWQ+ +              AL  +NW +TAAH V +       L + 
Sbjct: 1   IYGGQKAKPGDFPWQVLIL------GGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIR 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
              L      Y         +          F+ D+AL++    V    NI PIC+P  +
Sbjct: 55  MGTLKRLSPHYTQAWSEAVFI-HEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKE 113

Query: 511 TNF 513
              
Sbjct: 114 AES 116

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 242

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (155), Expect = 4e-12
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
           I GG+KA  G +PWQ+ +              AL  +NW +TAAH V +
Sbjct: 1   IYGGQKAKPGDFPWQVLIL------GGTTAAGALLYDNWVLTAAHAVYE 43

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.7 bits (187), Expect = 3e-16
 Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 18/142 (12%)

Query: 402 WPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEE--- 458
            PW +++ ++ +    ++CG  L + NW +TAAHC  D       + LG+++   +E   
Sbjct: 3   QPWHVAVYRFNK----YQCGGVLLDRNWVLTAAHCYND----KYQVWLGKNNFLEDEPSD 54

Query: 459 ------EPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN 512
                 +   + +  + ++  H       +  DL LLR  +P      + PI +P ++  
Sbjct: 55  QHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPK 114

Query: 513 FVGTSAHVTGWGRLYEGRFRRS 534
             G++   +GWG     +F+  
Sbjct: 115 L-GSTCLASGWGSTTPIKFKYP 135

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.4 bits (124), Expect = 4e-08
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 4/41 (9%)

Query: 574 WPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
            PW +++ ++ +    ++CG  L + NW +TAAHC  D + 
Sbjct: 3   QPWHVAVYRFNK----YQCGGVLLDRNWVLTAAHCYNDKYQ 39

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (187), Expect = 3e-16
 Identities = 43/191 (22%), Positives = 68/191 (35%), Gaps = 14/191 (7%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG + T    P+ + L           C  AL  ++W +TAAHC  +     +     
Sbjct: 1   IIGGNEVTPHSRPYMVLLS----LDRKTICAGALIAKDWVLTAAHCNLNKRSQVI----- 51

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
               S   E    Q   V+    +P +DP T E DL LL+  E  K    +  + +P+  
Sbjct: 52  LGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKG 111

Query: 511 TNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEM--ATC--WNHFLGNRILFPSSRIVG 565
            +   GT   V GWGR +                +    C   NH+  N ++  +    G
Sbjct: 112 DDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAG 171

Query: 566 GEKATFGKWPW 576
             +        
Sbjct: 172 SLRGGRDSCNG 182

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (166), Expect = 2e-13
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           I+GG + T    P+ + L           C  AL  ++W +TAAHC  +  SQ+I    +
Sbjct: 1   IIGGNEVTPHSRPYMVLLS----LDRKTICAGALIAKDWVLTAAHCNLNKRSQVILGAHS 56

Query: 623 CRRRESNLWKM 633
             R E     M
Sbjct: 57  ITREEPTKQIM 67

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

 Score = 76.3 bits (186), Expect = 4e-16
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 11/163 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++GG +    +  + ++      +T    CG  L N  W VTAAHC      +D  ++LG
Sbjct: 1   VIGGNECDINEHRFLVAFF----NTTGFFCGGTLINPEWVVTAAHCD----STDFQMQLG 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H      E         +      + +    + D+ L++  +P+    +I P+ +P   
Sbjct: 53  VHSKKVLNEDE-QTRNPKEKFICPNKNNNEVLDKDIMLIKLDKPISNSKHIAPLSLPSSP 111

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM--ATCWNHF 551
            +       +                + A    +  A C   +
Sbjct: 112 PSVGSVCRIMGWGSITPVKETFPDVPYCANINLLDHAVCQAGY 154

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

 Score = 64.4 bits (155), Expect = 4e-12
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           ++GG +    +  + ++      +T    CG  L N  W VTAAHC    +   + +   
Sbjct: 1   VIGGNECDINEHRFLVAFF----NTTGFFCGGTLINPEWVVTAAHCDSTDFQMQLGVHSK 56

Query: 623 CRRRESNLWKM 633
               E    + 
Sbjct: 57  KVLNEDEQTRN 67

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

 Score = 75.6 bits (184), Expect = 5e-16
 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 8/160 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG+ A  GK+P+Q+SLR     +  H+CGA++ + N  +TAAHCV+ +          
Sbjct: 1   IVGGKDAPVGKYPYQVSLR----LSGSHRCGASILDNNNVLTAAHCVDGLSNL----NRL 52

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           +  + T           V+    +  +D      D+AL+    P+KF   + PI +  +D
Sbjct: 53  KVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTND 112

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH 550
            +       +TGWG    G    +                
Sbjct: 113 EDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCE 152

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

 Score = 64.8 bits (156), Expect = 2e-12
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG+ A  GK+P+Q+SLR     +  H+CGA++ + N  +TAAHCV+ L +     +  
Sbjct: 1   IVGGKDAPVGKYPYQVSLR----LSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHV 56

Query: 623 CR 624
             
Sbjct: 57  GT 58

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (184), Expect = 6e-16
 Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 7/153 (4%)

Query: 393 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEH 452
           GG +      P+   L     +     CG  L   N+ +TAAHC          + LG H
Sbjct: 1   GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSIT----VTLGAH 56

Query: 453 DLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE-DDT 511
           +++ EE+   +Q+  V     HP+++  T  +D+ LL+  E       +  +  P   + 
Sbjct: 57  NITEEEDT--WQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNF 114

Query: 512 NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
              G    V GWGR    +           + M
Sbjct: 115 VPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLM 147

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (144), Expect = 1e-10
 Identities = 13/49 (26%), Positives = 18/49 (36%)

Query: 565 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
           GG +      P+   L     +     CG  L   N+ +TAAHC     
Sbjct: 1   GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSI 49

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.2 bits (183), Expect = 6e-16
 Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 5/161 (3%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A     P+  SL Q   +   H CG  L + ++ +TAAHC+ D+P   + + LG
Sbjct: 1   IVGGHEAQPHSRPYMASL-QMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLG 59

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++ T+E    +             +D      D+ L++   P     ++  + +P+ D
Sbjct: 60  AHNVRTQEPTQQHFSVAQVF---LNNYDAENKLNDILLIQLSSPANLSASVATVQLPQQD 116

Query: 511 TNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH 550
                GT     GWGR+                 +      
Sbjct: 117 QPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVVTFFCRP 157

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (148), Expect = 3e-11
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG +A     P+  SL Q   +   H CG  L + ++ +TAAHC+ D+  +++ ++  
Sbjct: 1   IVGGHEAQPHSRPYMASL-QMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLG 59

Query: 623 CRRRESNLWKM 633
                +     
Sbjct: 60  AHNVRTQEPTQ 70

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 75.1 bits (183), Expect = 7e-16
 Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 12/144 (8%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG        P+Q+SL         H CG +L N  W V+AAHC +         RLG
Sbjct: 1   IVGGYTCGANTVPYQVSLNSGY-----HFCGGSLINSQWVVSAAHCYKSGIQV----RLG 51

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
           E +++  E    +      IV  HP ++  T   D+ L++          +  I +P   
Sbjct: 52  EDNINVVEGNEQFISASKSIV--HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRS 534
            +   T   ++GWG          
Sbjct: 110 ASAG-TQCLISGWGNTKSSGTSYP 132

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.7 bits (156), Expect = 2e-12
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQII 617
           IVGG        P+Q+SL         H CG +L N  W V+AAHC +      +
Sbjct: 1   IVGGYTCGANTVPYQVSLNSGY-----HFCGGSLINSQWVVSAAHCYKSGIQVRL 50

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (184), Expect = 9e-16
 Identities = 41/189 (21%), Positives = 63/189 (33%), Gaps = 14/189 (7%)

Query: 381 CGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 437
           CG    P     RI+GG  A    +PWQ+              G AL NE W +TAAH V
Sbjct: 1   CGVPREPFEEKQRIIGGSDADIKNFPWQVFFDN-------PWAGGALINEYWVLTAAHVV 53

Query: 438 EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIV----ASHPQFDPRTFEYDLALLRFYE 493
           E      + +       S   +        V I               F+ D+AL+R  +
Sbjct: 54  EGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKD 113

Query: 494 PVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLG 553
           PVK  P + PIC+P   +++      +           R         +           
Sbjct: 114 PVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKE 173

Query: 554 NRILFPSSR 562
            ++  P++ 
Sbjct: 174 VKVEKPTAD 182

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (150), Expect = 2e-11
 Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 7/80 (8%)

Query: 554 NRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
                   RI+GG  A    +PWQ+              G AL NE W +TAAH VE   
Sbjct: 5   REPFEEKQRIIGGSDADIKNFPWQVFFDN-------PWAGGALINEYWVLTAAHVVEGNR 57

Query: 614 SQIIPIIQNCRRRESNLWKM 633
              + +     +        
Sbjct: 58  EPTMYVGSTSVQTSRLAKSK 77

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 74.7 bits (182), Expect = 1e-15
 Identities = 39/176 (22%), Positives = 60/176 (34%), Gaps = 23/176 (13%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG K      PWQ+++         + CG  L + +W +TAAHC  +         LG
Sbjct: 1   IVGGYKCEKNSQPWQVAVI------NEYLCGGVLIDPSWVITAAHCYSNNYQV----LLG 50

Query: 451 EHDLSTEEEPYGYQERR---------VQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNI 501
            ++L  +E     +  R           IV +  +        DL LL   EP      +
Sbjct: 51  RNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGV 110

Query: 502 IPICVPEDDTNFVGTSAHVTGWGRLYE---GRFRRSYGHPATRQEMATCWNHFLGN 554
             I +P  +   VG++   +GWG                         C   +  N
Sbjct: 111 KVIDLPTKE-PKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDN 165

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 65.5 bits (158), Expect = 2e-12
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQII 617
           IVGG K      PWQ+++         + CG  L + +W +TAAHC  + +  ++
Sbjct: 1   IVGGYKCEKNSQPWQVAVI------NEYLCGGVLIDPSWVITAAHCYSNNYQVLL 49

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (182), Expect = 1e-15
 Identities = 48/206 (23%), Positives = 76/206 (36%), Gaps = 12/206 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG KA   ++P+  S++    +   H CG AL +  + +TAA C +   P    + LG
Sbjct: 1   IVGGRKARPRQFPFLASIQ----NQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            +DL   E     ++       S   +DP+    DL LL+         ++  + +P  +
Sbjct: 57  AYDLRRRERQ--SRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQN 114

Query: 511 TNF-VGTSAHVTGWGRLYEGRFRRSYGHPA--TRQEMATCWNHFLGNRILFPSSRIVGGE 567
                GT   V GWG    G     +      T      C  + +   +L     I  G+
Sbjct: 115 ATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRPNNVCTGVLTRRGGICNGD 174

Query: 568 KATFGKWPWQISLRQWIRSTYLHKCG 593
             T             + S  L  CG
Sbjct: 175 GGTPLVCEGLA---HGVASFSLGPCG 197

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (155), Expect = 4e-12
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG KA   ++P+  S++    +   H CG AL +  + +TAA C +     +  ++  
Sbjct: 1   IVGGRKARPRQFPFLASIQ----NQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLG 56

Query: 623 CRRR 626
               
Sbjct: 57  AYDL 60

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (182), Expect = 1e-15
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 10/192 (5%)

Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRL 449
            I+GG++ +    P+  S++        H CG  L +  W +TAAHC            +
Sbjct: 2   EIIGGKEVSPHSRPFMASIQ----YGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQ-SPTV 56

Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
                S  +     Q   ++      +        D+ L++     K   ++  + +   
Sbjct: 57  VLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSK 116

Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRSYG-----HPATRQEMATCWNHFLGNRILFPSSRIV 564
            +   GT   VTGWG       R S            +++    +++ G+  +       
Sbjct: 117 TSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCA 176

Query: 565 GGEKATFGKWPW 576
           G  K        
Sbjct: 177 GDAKGQKDSCKG 188

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (167), Expect = 1e-13
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQ 621
            I+GG++ +    P+  S++        H CG  L +  W +TAAHC         P + 
Sbjct: 2   EIIGGKEVSPHSRPFMASIQ----YGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVV 57

Query: 622 NCRRRESNLW 631
                 S   
Sbjct: 58  LGAHSLSKNE 67

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

 Score = 73.7 bits (179), Expect = 3e-15
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 3/189 (1%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           ++GG  A+ G++PWQ+S  Q    ++ H CGA+L +   A++A+HCV+ V P+++ +  G
Sbjct: 1   VIGGTNASPGEFPWQLSQ-QRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAG 59

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
               S              +  ++             L               +    ++
Sbjct: 60  LWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNN 119

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM--ATCWNHFLGNRILFPSSRIVGGEK 568
            ++ GT+  ++GWGR             ++   +  A C    +G          +  + 
Sbjct: 120 NDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQD 179

Query: 569 ATFGKWPWQ 577
                    
Sbjct: 180 PAGNTGACN 188

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

 Score = 66.8 bits (161), Expect = 7e-13
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           ++GG  A+ G++PWQ+S  Q    ++ H CGA+L +   A++A+HCV+ +    I +I  
Sbjct: 1   VIGGTNASPGEFPWQLSQ-QRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAG 59

Query: 623 CRRRESNLWKM 633
             ++       
Sbjct: 60  LWQQSDTSGTQ 70

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

 Score = 71.7 bits (174), Expect = 1e-14
 Identities = 43/215 (20%), Positives = 70/215 (32%), Gaps = 30/215 (13%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG  A+ G +P+ +S+           CG +L N N  +TAAHCV     S   +R G
Sbjct: 1   IVGGTSASAGDFPFIVSIS----RNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAG 56

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
               +              + +            DLA+L+    +    NI    +    
Sbjct: 57  SLSRT-------SGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGYARLAASG 109

Query: 511 TNFV-GTSAHVTGWGRLYEGRFRRS---YGHPATRQEMATCWNHFLGNRILFPSSRIVGG 566
           ++ V G+SA V GWG   EG                  ATC   +  + I          
Sbjct: 110 SDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAIT--------- 160

Query: 567 EKATFGKWPWQISLRQWIRSTYLHKCGAALFNENW 601
                    +   +    + +     G  + + + 
Sbjct: 161 ------NQMFCAGVSSGGKDSCQGDSGGPIVDSSN 189

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

 Score = 64.7 bits (156), Expect = 3e-12
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG  A+ G +P+ +S+           CG +L N N  +TAAHCV         I   
Sbjct: 1   IVGGTSASAGDFPFIVSIS----RNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAG 56

Query: 623 CRRRESNLWKM 633
              R S     
Sbjct: 57  SLSRTSGGITS 67

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (173), Expect = 1e-14
 Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 9/163 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+GG ++     P+   L Q        +CG  L  E++ +TAAHC            LG
Sbjct: 1   IIGGRESRPHSRPYMAYL-QIQSPAGQSRCGGFLVREDFVLTAAHCWGSNINV----TLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE-D 509
            H++   E    +   R  I   HPQ++ RT + D+ LL+    V+   N+ P+ +P   
Sbjct: 56  AHNIQRRENTQQHITARRAIR--HPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQ 113

Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRSYGH-PATRQEMATCWNHF 551
           +    GT   V GWGR+   R   +        Q    C   F
Sbjct: 114 EGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIF 156

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (138), Expect = 5e-10
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           I+GG ++     P+   L Q        +CG  L  E++ +TAAHC     +  +     
Sbjct: 1   IIGGRESRPHSRPYMAYL-QIQSPAGQSRCGGFLVREDFVLTAAHCWGSNINVTLGAHNI 59

Query: 623 CRRRESNLW 631
            RR  +   
Sbjct: 60  QRRENTQQH 68

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]} Length = 226

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

 Score = 70.5 bits (171), Expect = 2e-14
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 9/141 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           IVGG +A    WP Q +L         + CG +L +  W +TAAHC++     D  + LG
Sbjct: 1   IVGGVEAVPNSWPHQAALFIDDM----YFCGGSLISPEWILTAAHCMDGAGFVD--VVLG 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            H++  +E        +      H  ++      D+A++R   PV     I  + +P   
Sbjct: 55  AHNIREDE--ATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLP-ST 111

Query: 511 TNFVGTSAHVTGWGRLYEGRF 531
              VGT    TGWG   +   
Sbjct: 112 DVGVGTVVTPTGWGLPSDSAL 132

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]} Length = 226

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

 Score = 63.5 bits (153), Expect = 6e-12
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           IVGG +A    WP Q +L         + CG +L +  W +TAAHC++      + +  +
Sbjct: 1   IVGGVEAVPNSWPHQAALFIDDM----YFCGGSLISPEWILTAAHCMDGAGFVDVVLGAH 56

Query: 623 CRRRESNLW 631
             R +    
Sbjct: 57  NIREDEATQ 65

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (170), Expect = 4e-14
 Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 16/166 (9%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +V G         W +SLR   +    H CG +L  E+W +TA  C       D    LG
Sbjct: 1   VVNGIPTR-TNIGWMVSLRYRNK----HICGGSLIKESWVLTARQCFPSRDLKDYEAWLG 55

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
            HD       +G  + + + V +  Q        DL L++   P      +  I +P   
Sbjct: 56  IHD------VHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVSTIDLPNYG 109

Query: 511 TNF-----VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHF 551
           +                    Y+G  R ++ +    ++ +      
Sbjct: 110 STIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGK 155

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (136), Expect = 1e-09
 Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 5/71 (7%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           +V G         W +SLR   +    H CG +L  E+W +TA  C      +       
Sbjct: 1   VVNGIPTR-TNIGWMVSLRYRNK----HICGGSLIKESWVLTARQCFPSRDLKDYEAWLG 55

Query: 623 CRRRESNLWKM 633
                    + 
Sbjct: 56  IHDVHGRGDEK 66

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

 Score = 67.4 bits (163), Expect = 3e-13
 Identities = 30/201 (14%), Positives = 59/201 (29%), Gaps = 14/201 (6%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           +VGG +A  G++P+ + L           CG AL+ ++  +TAAHCV     +       
Sbjct: 1   VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSGSGNNT-----S 47

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
                   +       +V+               D AL++  +P+      I      + 
Sbjct: 48  ITATGGVVDLQSSSAVKVRSTKVLQAPGYNGTGKDWALIKLAQPINQPTLKIATTTAYNQ 107

Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW-NHFLGNRILFPSSRIVGGEKA 569
             F          G   +    ++     +     + + N  + N  +       GG   
Sbjct: 108 GTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSAYGNELVANEEICAGYPDTGGVDT 167

Query: 570 TFGKWPWQISLRQWIRSTYLH 590
             G     +  +         
Sbjct: 168 CQGDSGGPMFRKDNADEWIQV 188

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

 Score = 65.9 bits (159), Expect = 9e-13
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           +VGG +A  G++P+ + L           CG AL+ ++  +TAAHCV    +        
Sbjct: 1   VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSGSGNNTSITATG 52

Query: 623 CRRRESNLWKM 633
                 +   +
Sbjct: 53  GVVDLQSSSAV 63

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]} Length = 230

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

 Score = 64.8 bits (156), Expect = 2e-12
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
           I+ G +A  G +P+Q  L   ++      CG +L +  W +TAAHCV D           
Sbjct: 1   IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDAVSVV------ 54

Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
              L +  +  G      + + SH  F+P T+  D+AL++                  ++
Sbjct: 55  -VYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIPHVEYTDNIQPIRLPSGEE 113

Query: 511 TNFVGTSAHVTGW 523
            N    +   T  
Sbjct: 114 LNNKFENIWATVS 126

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]} Length = 230

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

 Score = 63.7 bits (153), Expect = 7e-12
 Identities = 19/69 (27%), Positives = 33/69 (47%)

Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
           I+ G +A  G +P+Q  L   ++      CG +L +  W +TAAHCV D  S ++ +   
Sbjct: 1   IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDAVSVVVYLGSA 60

Query: 623 CRRRESNLW 631
            +     + 
Sbjct: 61  VQYEGEAVV 69

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]} Length = 263

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

 Score = 63.5 bits (153), Expect = 1e-11
 Identities = 14/160 (8%), Positives = 35/160 (21%), Gaps = 12/160 (7%)

Query: 402 WPWQISLRQWIRSTYLHKCGAALFN------ENWAVTAAHCVEDVPPSDLLLRLGEHDLS 455
               I        +    C  +L N      + + +TA HC      +   + +  +  +
Sbjct: 18  RRDIIRAVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQN 77

Query: 456 TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-V 514
           +       +        ++        +    +   Y    F    +          F  
Sbjct: 78  S-----TCRAPNTPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAANPAFNLFWA 132

Query: 515 GTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGN 554
           G       +                +     T +  + G 
Sbjct: 133 GWDRRDQNYPGAIAIHHPNVAEKRISNSTSPTSFVAWGGG 172

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]} Length = 242

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

 Score = 44.2 bits (103), Expect = 2e-05
 Identities = 18/141 (12%), Positives = 41/141 (29%), Gaps = 7/141 (4%)

Query: 386 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDL 445
            P       ++    K+P+      +++          L  +N  +T  H  +    +  
Sbjct: 25  LPKELFSKVDEKDRQKYPYNTIGNVFVKGQTS--ATGVLIGKNTVLTNRHIAKF--ANGD 80

Query: 446 LLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFY---EPVKFQPNII 502
             ++        ++    +    +        +P     DLAL+R       V     I 
Sbjct: 81  PSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNGVSLGDKIS 140

Query: 503 PICVPEDDTNFVGTSAHVTGW 523
           P  +   +    G    + G+
Sbjct: 141 PAKIGTSNDLKDGDKLELIGY 161

>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus [TaxId: 1280]} Length = 246

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Exfoliative toxin B
species: Staphylococcus aureus [TaxId: 1280]

 Score = 38.0 bits (87), Expect = 0.002
 Identities = 22/161 (13%), Positives = 51/161 (31%), Gaps = 10/161 (6%)

Query: 366 EIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALF 425
           E  ++ I     K      + P+ + +        + P+      +++ + L      L 
Sbjct: 2   EYSAEEIRKLKQKF----EVPPTDKELYTHITDNARSPYNSVGTVFVKGSTL--ATGVLI 55

Query: 426 NENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYD 485
            +N  VT  H   +   +   +       + + E   +     +  A   +  P     D
Sbjct: 56  GKNTIVTNYHVAREAAKNPSNIIFTPAQ-NRDAEKNEFPTPYGKFEAEEIKESPYGQGLD 114

Query: 486 LALLRF---YEPVKFQPNIIPICVPEDDTNFVGTSAHVTGW 523
           LA+++     +       I P  +P+      G    + G+
Sbjct: 115 LAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGY 155

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	697
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	100.0
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	100.0
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	100.0
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	100.0
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	100.0
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	100.0
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	100.0
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	100.0
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	99.98
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	99.98
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	99.98
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	99.98
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	99.98
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	99.98
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	99.98
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	99.98
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	99.98
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	99.98
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	99.97
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	99.97
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	99.97
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	99.97
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	99.97
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	99.97
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	99.97
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	99.97
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	99.97
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	99.97
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	99.97
d1elva1	259	Complement C1S protease, catalytic domain {Human (	99.97
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.97
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	99.97
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	99.97
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	99.97
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	99.97
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.97
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	99.96
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	99.96
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	99.96
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	99.96
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	99.96
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	99.96
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	99.96
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	99.96
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	99.96
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	99.95
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	99.94
d1arba_	263	Achromobacter protease {Achromobacter lyticus, str	99.65
d1p3ca_	215	Glutamyl endopeptidase {Bacillus intermedius [TaxI	99.6
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	99.14
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	99.13
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.09
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	99.08
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.07
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.07
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	99.06
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	99.05
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	99.05
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	99.04
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	99.04
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	99.03
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	99.03
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	99.03
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	99.02
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	99.02
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	99.01
d2o8la1	216	V8 protease {Staphylococcus aureus [TaxId: 1280]}	99.01
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	99.0
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	99.0
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	99.0
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	99.0
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	99.0
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	99.0
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	99.0
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	99.0
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	98.99
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	98.99
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	98.98
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	98.98
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	98.98
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	98.97
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	98.97
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	98.96
d1agja_	242	Epidermolytic (exfoliative) toxin A {Staphylococcu	98.96
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	98.95
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	98.95
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	98.95
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	98.95
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	98.95
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	98.95
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	98.95
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	98.94
d1elva1	259	Complement C1S protease, catalytic domain {Human (	98.94
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	98.94
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	98.94
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	98.94
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	98.93
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	98.93
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	98.93
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	98.93
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	98.9
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	98.9
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	98.81
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	98.79
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	98.71
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	98.66
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	98.41
d1hpga_	187	Glutamic acid-specific protease {Streptomyces gris	98.4
d1qtfa_	246	Exfoliative toxin B {Staphylococcus aureus [TaxId:	98.15
d1arba_	263	Achromobacter protease {Achromobacter lyticus, str	98.15
d1p3ca_	215	Glutamyl endopeptidase {Bacillus intermedius [TaxI	97.52
d2o8la1	216	V8 protease {Staphylococcus aureus [TaxId: 1280]}	97.25
d1agja_	242	Epidermolytic (exfoliative) toxin A {Staphylococcu	96.43
d2qaaa1	185	Protease B {Streptomyces griseus, strain k1 [TaxId	96.37
d1lcya2	205	Mitochondrial serine protease HtrA2, catalytic dom	96.26
d2z9ia2	221	Protease PepD {Mycobacterium tuberculosis [TaxId:	96.22
d2qf3a1	210	Stress sensor protease DegS, catalytic domain {Esc	95.67
d1l1ja_	228	Protease Do (DegP, HtrA), catalytic domain {Thermo	95.62
d2sgaa_	181	Protease A {Streptomyces griseus, strain k1 [TaxId	95.05
d1ky9a2	249	Protease Do (DegP, HtrA), catalytic domain {Escher	94.16
d2h5ca1	198	alpha-Lytic protease {Lysobacter enzymogenes, 495	93.72
d1qtfa_	246	Exfoliative toxin B {Staphylococcus aureus [TaxId:	92.57
d1hpga_	187	Glutamic acid-specific protease {Streptomyces gris	91.68
d2bhga1	199	3C cysteine protease (picornain 3C) {Foot-and-mout	89.9
d1lvmb_	219	TEV protease (nucleat inclusion protein A, NIA) {T	85.4

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-34  Score=276.29  Aligned_cols=187  Identities=29%  Similarity=0.497  Sum_probs=157.9

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||||+|++    +..++|+|+||+++||||||||+.+.   ...+.++..+......  ..+...+..
T Consensus         1 ivgG~~a~~~e~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~   71 (232)
T d1orfa_           1 IIGGNEVTPHSRPYMVLLSL----DRKTICAGALIAKDWVLTAAHCNLNK---RSQVILGAHSITREEP--TKQIMLVKK   71 (232)
T ss_dssp             CBSCEECCTTSSTTEEEEEC----SSSCEEEEEEEETTEEEECTTCCCCT---TCEEEESCSBSSSCCT--TCEEECEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEecCCEEEEChhhcCCC---Ccceeeeeeecccccc--ccccceEEE
Confidence            79999999999999999976    34678999999999999999999763   2445555555544333  467888999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++.||+|+.....||||||+|++++.++++++|||||...... .+..+.++|||....                     
T Consensus        72 i~~hp~y~~~~~~~diAll~l~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~g~~~~---------------------  130 (232)
T d1orfa_          72 EFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHN---------------------  130 (232)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSS---------------------
T ss_pred             EEecccccccccCcceeEeeeccceeeeeeEeeeeecccccccccCceeeeccccccCC---------------------
Confidence            9999999999999999999999999999999999999776554 589999999999876                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (232)
T d1orfa_         131 --------------------------------------------------------------------------------  130 (232)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..||++.+.+++.++|+..+.+ .....+.+++|||+...++.+.|.|||||++
T Consensus       131 -------~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~~~~~~C~~~~~~~~~~c~gdsG~Pl  188 (232)
T d1orfa_         131 -------SASWSDTLREVEITIIDRKVCNDRNHY-NFNPVIGMNMVCAGSLRGGRDSCNGDSGSPL  188 (232)
T ss_dssp             -------SSCCCSBCEEEEEEEECHHHHTSTTTT-TTTTCCCTTEEEEECSSCCCBCCTTCTTCEE
T ss_pred             -------cccCChhheEEEeecCCHHHHhhhhhc-ccCccccCceEEeccCCCCcccccccCCCeE
Confidence                   344567899999999999999876643 2345688999999988888999999999987

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-33  Score=273.58  Aligned_cols=192  Identities=26%  Similarity=0.415  Sum_probs=163.0

Q ss_pred             CeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       390 RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      ||+||++|..++|||+|+|++    +..++|+|+||+++||||||||+.+.. ...+.|.++.........  ..+.+.+
T Consensus         2 ri~gG~~a~~~e~Pw~v~i~~----~~~~~C~GtLIs~~~VLTAAhCv~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~   75 (240)
T d1mzaa_           2 EIIGGKEVSPHSRPFMASIQY----GGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEA--SKQTLEI   75 (240)
T ss_dssp             CCCCCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCT--TCEEEEE
T ss_pred             EEECCEECCCCCCCcEEEEEE----CCeEEEEEEEEeCCEEEECeEcccccCCcceeEEEEeecccCcCCc--cceeEee
Confidence            899999999999999999986    346889999999999999999998643 345677887776665443  4678899


Q ss_pred             EEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        469 QIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       469 ~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                      .+++.||+|+.....+|||||+|++++.|+++++||||+..........+.+.|||.....                   
T Consensus        76 ~~i~~h~~~~~~~~~~diAll~l~~~~~~~~~~~picL~~~~~~~~~~~~~~~g~g~~~~~-------------------  136 (240)
T d1mzaa_          76 KKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPD-------------------  136 (240)
T ss_dssp             EEEEECCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTT-------------------
T ss_pred             eeeeeeccccccccCcceEEEeecceeeeeeccccccccccccccceeeEEEEEeccccCC-------------------
Confidence            9999999999999999999999999999999999999998776666788999999988652                   


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       137 --------------------------------------------------------------------------------  136 (240)
T d1mzaa_         137 --------------------------------------------------------------------------------  136 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              .+..+..|+.+.+.+++.++|+..+.+. ......+.++|++...+..+.|+|||||++
T Consensus       137 --------~~~~~~~l~~~~~~~~~~~~C~~~~~~~-~~~~~~~~~~c~~~~~~~~~~C~gDsGgPl  194 (240)
T d1mzaa_         137 --------SLRPSDTLREVTVTVLSRKLCNSQSYYN-GDPFITKDMVCAGDAKGQKDSCKGDAGGPL  194 (240)
T ss_dssp             --------CSSCCSBCEEEEEEECCHHHHTSTTTTT-TTTCCCTTEEEEECTTSCCCCCTTCTTCEE
T ss_pred             --------cCcCCcccEEEEEEEecHHHhhhhhhcc-CCcccccceEEeccCCCCccCccCCCCCeE
Confidence                    2345678999999999999999865432 234567899999988888999999999986

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.2e-33  Score=270.07  Aligned_cols=187  Identities=27%  Similarity=0.437  Sum_probs=161.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||+|+|.+.....+.++|+|+||+++||||||||+..    ...|++|.+++....+  ..+...|.+
T Consensus         1 I~gG~~a~~ge~P~~v~i~~~~~~~~~~~C~GtLI~~~~VLTaAhC~~~----~~~v~~G~~~~~~~~~--~~~~~~v~~   74 (227)
T d1fi8a_           1 IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHCSGS----KIQVTLGAHNIKEQEK--MQQIIPVVK   74 (227)
T ss_dssp             CBSCEECCTTSSTTEEEEEEECTTC-CCEEEEEEEETTEEEECGGGCCS----EEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEeCCCCceEEEEEEEeCCEEEEecccccc----cceeeeeecccccCCC--CceEEEEEE
Confidence            7899999999999999998765556678999999999999999999863    5689999988766554  468889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||.|+....++|||||+|++++.|+++|+||||+...... .+..+++.|||....+                    
T Consensus        75 i~~~~~~~~~~~~~diall~l~~~i~~~~~v~picl~~~~~~~~~~~~~~~~g~g~~~~~--------------------  134 (227)
T d1fi8a_          75 IIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVKPGDVCYVAGWGKLGPM--------------------  134 (227)
T ss_dssp             EEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTT--------------------
T ss_pred             EEecccccCccccchhhhhhccCceeeeeeEEEEEecccCcccCCCCEEEEEeeccccCC--------------------
Confidence            9999999999999999999999999999999999999876543 5899999999998762                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       135 --------------------------------------------------------------------------------  134 (227)
T d1fi8a_         135 --------------------------------------------------------------------------------  134 (227)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              ...+..|+.+.++++++++|...+..    ......++|++...+..+.|+|||||++
T Consensus       135 --------~~~~~~l~~~~~~~~~~~~c~~~~~~----~~~~~~~~~~~~~~~~~~~c~gdsGgPl  188 (227)
T d1fi8a_         135 --------GKYSDTLQEVELTVQEDQKCESYLKN----YFDKANEICAGDPKIKRASFRGDSGGPL  188 (227)
T ss_dssp             --------CCBCSBCEEEEEEBCCHHHHHHHTTT----TCCTTTEEEESCTTSCCBCCTTCTTSEE
T ss_pred             --------CCCCceeeEEEEEEEEchhhhhhhhc----ccccceeeeeeeccccCCCcCCCcCCEE
Confidence                    23467899999999999999988742    2466788999988888999999999986

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-32  Score=265.86  Aligned_cols=180  Identities=29%  Similarity=0.546  Sum_probs=155.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|+.++|||+|+|+.    +..++|+|+||+++||||||||+..    .+.|++|.........  ..+.+.+.+
T Consensus         1 i~~G~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~----~~~v~~g~~~~~~~~~--~~~~~~~~~   70 (221)
T d1lo6a_           1 LVHGGPCDKTSHPYQAALYT----SGHLLCGGVLIHPLWVLTAAHCKKP----NLQVFLGKHNLRQRES--SQEQSSVVR   70 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCT----TCEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEE----CCcEEEEEEEEeCCEEEECeecccc----ccceeeceeeecccCc--cceeeeccc
Confidence            78999999999999999976    4578999999999999999999964    4689999888765544  468889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+.....+|||||+|+.++.++++++|||||..... .+..+.++|||....                      
T Consensus        71 ~~~~p~y~~~~~~~diAll~l~~~~~~~~~v~pi~l~~~~~~-~~~~~~~~Gwg~~~~----------------------  127 (221)
T d1lo6a_          71 AVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSA-NTTSCHILGWGKTAD----------------------  127 (221)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCCTTC-CCCEEEEEESSCCTT----------------------
T ss_pred             cccCCCcccccccceeEEeecccccceeeeEEeccccccCCc-ccceEEEEecccccC----------------------
Confidence            999999999999999999999999999999999999976543 688999999998765                      


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       128 --------------------------------------------------------------------------------  127 (221)
T d1lo6a_         128 --------------------------------------------------------------------------------  127 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             ...+..|+.+.+++++.++|++.+.     ..+.+.++|......+.+.|+||+||++
T Consensus       128 -------~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~~~~~~~~~~~~c~gd~G~Pl  180 (221)
T d1lo6a_         128 -------GDFPDTIQCAYIHLVSREECEHAYP-----GQITQNMLCAGDEKYGKDSCQGDSGGPL  180 (221)
T ss_dssp             -------SSCCSBCEEEEEEEECHHHHHHHST-----TTCCTTEEEEECTTTCCBCCTTTTTCEE
T ss_pred             -------CCCCccceEEEEEEecHHHHHHHcC-----CCccCCceeeeccccCCCCccCCCCCcE
Confidence                   2235689999999999999999875     2455677777766778899999999986

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.3e-32  Score=267.42  Aligned_cols=189  Identities=33%  Similarity=0.647  Sum_probs=159.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC--CCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP--PSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~--~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      |+||++|..++|||+|+|++    ...++|+|+||+++||||||||+....  ...+.+.+|..+.....+ ...+.+.|
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v   75 (235)
T d1ekbb_           1 IVGGSDSREGAWPWVVALYF----DDQQVCGASLVSRDWLVSAAHCVYGRNMEPSKWKAVLGLHMASNLTS-PQIETRLI   75 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEECSSSEEEECHHHHTTCCSSGGGEEEEESCCBTTCCCC-TTCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEEcCCEEEEChhhccCCCCCccceeeeecccccccccC-cceeEeee
Confidence            79999999999999999986    346789999999999999999997633  345677788776554333 25688999


Q ss_pred             EEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        469 QIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       469 ~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      .++++||+|+.....+|||||+|++++.|+.+++|||||...... .+..+.++|||....                   
T Consensus        76 ~~~~~hp~~~~~~~~~diAli~L~~~v~~~~~~~picLp~~~~~~~~~~~~~~~g~~~~~~-------------------  136 (235)
T d1ekbb_          76 DQIVINPHYNKRRKNNDIAMMHLEMKVNYTDYIQPICLPEENQVFPPGRICSIAGWGALIY-------------------  136 (235)
T ss_dssp             EEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSST-------------------
T ss_pred             eeeeecccccccCccchhhhhhhcCceecCCceeeEECCCccccCCcceEEEEeccccccc-------------------
Confidence            999999999999999999999999999999999999999876544 588999999999876                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       137 --------------------------------------------------------------------------------  136 (235)
T d1ekbb_         137 --------------------------------------------------------------------------------  136 (235)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                               .+.....|++..+.+++.+.|...+..    ....+.++|+....++.++|+|||||++.
T Consensus       137 ---------~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~c~~~~~~~~~~c~gdsG~pl~  192 (235)
T d1ekbb_         137 ---------QGSTADVLQEADVPLLSNEKCQQQMPE----YNITENMVCAGYEAGGVDSCQGDSGGPLM  192 (235)
T ss_dssp             ---------TSCBCSBCEEEEEEBCCHHHHHHHCTT----SCCCTTEEEECCTTCCCBCCTTCTTCEEE
T ss_pred             ---------CCcccccceeeEEEEecHHHhcccccc----cccCcccEEEEcCCCCcccccCCCCCccE
Confidence                     233356899999999999999987642    35788999999888888999999999863

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=100.00  E-value=1.1e-32  Score=268.34  Aligned_cols=185  Identities=21%  Similarity=0.349  Sum_probs=160.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||+|+|.+....+..++|+|+||+++||||||||+.    ..+.|++|........+  ..+...|.+
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaA~C~~----~~~~v~~g~~~~~~~~~--~~~~~~v~~   74 (224)
T d3rp2a_           1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKG----REITVILGAHDVRKRES--TQQKIKVEK   74 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCC----SEEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECcCCCCCCEEEEEEEeCCCCeEEEEEEEEcCCeeEecccccc----cccEEEeccccccCccc--cceeeeEEE
Confidence            789999999999999999886655667899999999999999999985    46889999888766554  467889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++|++|+.....+|||||+|++++.|+++++|+||+...... .+..+.+.|||.....                    
T Consensus        75 ~~~~~~~~~~~~~~diall~L~~~v~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~--------------------  134 (224)
T d3rp2a_          75 QIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVR--------------------  134 (224)
T ss_dssp             EEECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETT--------------------
T ss_pred             EEecccccccccccceeeeeecceeEeccccceEEecccccccCCCcEEEEeeeeeeecC--------------------
Confidence            9999999999999999999999999999999999999876544 5889999999988662                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       135 --------------------------------------------------------------------------------  134 (224)
T d3rp2a_         135 --------------------------------------------------------------------------------  134 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              +.....||++.+++++.+.|++.+.      ....+++|++...++.+.|+||+||++
T Consensus       135 --------~~~~~~l~~~~~~~~~~~~C~~~~~------~~~~~~~~~~~~~~~~~~c~~d~G~Pl  186 (224)
T d3rp2a_         135 --------DPTSYTLREVELRIMDEKACVDYRY------YEYKFQVCVGSPTTLRAAFMGDSGGPL  186 (224)
T ss_dssp             --------EEECSBCEEEEEEEECGGGTTTTTC------CCTTTEEEECCTTSCCBCCTTTTTCEE
T ss_pred             --------CCccceeeEEEEEccCHHHhhhccc------ccccceeeeccCcccccCcCCCcCCeE
Confidence                    1223579999999999999997663      356789999888888899999999986

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=100.00  E-value=5.3e-32  Score=264.51  Aligned_cols=190  Identities=37%  Similarity=0.669  Sum_probs=160.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC---CCceEEEEccccCCCCCCCCCcEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP---PSDLLLRLGEHDLSTEEEPYGYQERR  467 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~---~~~l~V~LG~~dl~~~~~~~~~q~~~  467 (697)
                      |+||+++..++|||+|+|++...+...++|+|+||+++||||||||+.+..   ...+.+..+.........  ..+...
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   78 (237)
T d2f91a1           1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEG--SEQIIT   78 (237)
T ss_dssp             CBSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCS--CCEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCCcEEEEEEEEeCCEEEECcccccccCCccccceeEEeeecccccccC--cceeee
Confidence            789999999999999999876655567789999999999999999997643   334555555555444333  568899


Q ss_pred             EEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        468 VQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       468 V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      |.++++||+|+....++|||||+|+.++.++..++||||+..... .+..+.++|||.+..                   
T Consensus        79 v~~i~~h~~y~~~~~~~diAll~l~~~v~~~~~~~~i~~~~~~~~-~~~~~~~~g~g~~~~-------------------  138 (237)
T d2f91a1          79 VSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHT-ATGDVIVTGWGTTSE-------------------  138 (237)
T ss_dssp             EEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCC-CCSEEEEEESCCSST-------------------
T ss_pred             EEEEEEccccCCCccccceeeeccccccccCCceeeeeccccCcc-cccceeeccccccCC-------------------
Confidence            999999999999999999999999999999999999999987654 578999999999876                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       139 --------------------------------------------------------------------------------  138 (237)
T d2f91a1         139 --------------------------------------------------------------------------------  138 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               .+..+..||++.+.+++.+.|+..+..    ..+.+.++|++...+..+.|+||||||+
T Consensus       139 ---------~~~~~~~l~~~~~~~~~~~~C~~~~~~----~~~~~~~~c~~~~~~~~~~~~gdsG~Pl  193 (237)
T d2f91a1         139 ---------GGNTPDVLQKVTVPLVSDEDCRADYGA----DEILDSMICAGVPEGGKDSCQGDSGGPL  193 (237)
T ss_dssp             ---------TCCCCSBCEEEEEEEECHHHHHHHHCT----TTSCTTEEEECCTTCCCBCCTTCTTCEE
T ss_pred             ---------CCcCCchheEEEEEEeCHHHHhhhccC----CcccCceeEeecCCCccccccCCCCCeE
Confidence                     234567899999999999999988742    3477889999988888899999999986

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-32  Score=266.75  Aligned_cols=188  Identities=39%  Similarity=0.746  Sum_probs=158.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC------CCCceEEEEccccCCCCCCCCCcE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV------PPSDLLLRLGEHDLSTEEEPYGYQ  464 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~------~~~~l~V~LG~~dl~~~~~~~~~q  464 (697)
                      |+||.+|..++|||+|.|+..   +..++|+|+||+++||||||||+.+.      ....+.+..+..+...... ...+
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~---~~~~~C~GtlIs~~~VLTaA~Cv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   76 (241)
T d1eaxa_           1 VVGGTDADEGEWPWQVSLHAL---GQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSA-PGVQ   76 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEET---TTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCCBTTCTTS-TTCE
T ss_pred             CCCCEECCCCCCCcEEEEEEC---CCCEEEEEEEEcCCEEEECeeeeecCCceeeeccceeeEEeeeeecccccC-CCcE
Confidence            789999999999999999763   34679999999999999999999753      2334677777766554332 2578


Q ss_pred             EEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccc
Q psy12777        465 ERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQE  543 (697)
Q Consensus       465 ~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~  543 (697)
                      .+.|.++++||+|+.....+|||||||+.++.|...++|||||...... .+..+...|||....               
T Consensus        77 ~~~v~~i~~Hp~y~~~~~~~diAll~L~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~~~~~---------------  141 (241)
T d1eaxa_          77 ERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQY---------------  141 (241)
T ss_dssp             EEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSST---------------
T ss_pred             EEEEEEEEECCcccccccCCcccccccCCceecCcccceeeccccccccccceeEEEeccCCccc---------------
Confidence            9999999999999999999999999999999999999999999765543 578899999988765               


Q ss_pred             ccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecc
Q psy12777        544 MATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNC  623 (697)
Q Consensus       544 s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~  623 (697)
                                                                                                      
T Consensus       142 --------------------------------------------------------------------------------  141 (241)
T d1eaxa_         142 --------------------------------------------------------------------------------  141 (241)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        624 RRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       624 ~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                   .......|+++.+++++++.|+..|.     ..+.+++||++...++.+.|+||+||++
T Consensus       142 -------------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~c~~~~~~~~~~c~gd~G~pl  195 (241)
T d1eaxa_         142 -------------GGTGALILQKGEIRVINQTTCENLLP-----QQITPRMMCVGFLSGGVDSCQGDSGGPL  195 (241)
T ss_dssp             -------------TSCBCSBCEEEEEEECCHHHHHHHST-----TTCCTTEEEEECTTCSSBCCTTCTTCEE
T ss_pred             -------------cccccccceEEEEEEeCHHHHHHHhC-----ccccCccceeccCCCCcccccCccccee
Confidence                         23345689999999999999999875     2478899999988888899999999986

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2e-32  Score=269.83  Aligned_cols=200  Identities=31%  Similarity=0.594  Sum_probs=159.2

Q ss_pred             CCCcCC---CCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCC
Q psy12777        381 CGRRLF---PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTE  457 (697)
Q Consensus       381 CG~~~~---~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~  457 (697)
                      ||+...   ...||+||++|..++|||+|+|.+...+...++|+|+||+++||||||||+.........+..+.......
T Consensus         1 cg~~~~~~~~~~ri~gG~~a~~~~~Pw~v~i~~~~~~~~~~~C~G~LIs~~~VLTaAhC~~~~~~~~~~~~~~~~~~~~~   80 (251)
T d1pytd_           1 CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNTLTYRVALGKNNLEVEDE   80 (251)
T ss_dssp             CCCCSSCCCSSSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTTCCEEEEESCSBTTCSCC
T ss_pred             CcCCCCCCCCCCeEECCEECCCCCCCcEEEEEEEeCCCceeEEeEEEEcCCeEEEeeecccccccceeeeeeeeeecccC
Confidence            787643   26899999999999999999998765555678999999999999999999986433222222222222111


Q ss_pred             CCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCC
Q psy12777        458 EEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYG  536 (697)
Q Consensus       458 ~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~  536 (697)
                         ...+...|.++++||+|+.....+|||||+|.+|+.|+++++||||+...... .+..|.+.||+.+..        
T Consensus        81 ---~~~~~~~v~~i~~h~~y~~~~~~~diali~l~~pi~~~~~~~pi~l~~~~~~~~~~~~~~~~g~~~~~~--------  149 (251)
T d1pytd_          81 ---AGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYT--------  149 (251)
T ss_dssp             ---SSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSC--------
T ss_pred             ---CCceEEeEEEEEEeeeecccccCCceeeeecCCCcccCceeEEEEeeccccCCCCceeEEEecCccccC--------
Confidence               24688999999999999999999999999999999999999999999876543 588999999998876        


Q ss_pred             CCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccce
Q psy12777        537 HPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQI  616 (697)
Q Consensus       537 ~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~  616 (697)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (251)
T d1pytd_         150 --------------------------------------------------------------------------------  149 (251)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        617 IPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       617 i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                          ++.....++...+.++++++|.+.+..   ...+...++||+. .++.+.|.||+||++
T Consensus       150 --------------------~~~~~~~~~~~~~~~~~~~~C~~~~~~---~~~~~~~~~c~~~-~~~~~~c~gd~G~Pl  204 (251)
T d1pytd_         150 --------------------NGPIAAELQQGLQPVVDYATCSQRDWW---GTTVKETMVCAGG-DGVISACNGDSGGPL  204 (251)
T ss_dssp             --------------------CSCCCSBCBCCEEECBCHHHHTSTTTT---TTTCCTTEEEECC-SCSSCCCCSCTTCEE
T ss_pred             --------------------CCcccceeceeeccccCHHHHhhhhcc---cccccCceEEecc-CCCCccccCCCCCce
Confidence                                233456677888999999999987642   2457888999985 456799999999986

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=7e-32  Score=261.02  Aligned_cols=184  Identities=27%  Similarity=0.474  Sum_probs=158.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|++.. .+..++|+|+||+++||||||||+.    ....|++|.........  ..+...|.+
T Consensus         1 IvgG~~a~~~e~Pw~v~i~~~~-~~~~~~C~GtlI~~~~VLTaAhC~~----~~~~v~~g~~~~~~~~~--~~~~~~v~~   73 (224)
T d1t32a1           1 IIGGRESRPHSRPYMAYLQIQS-PAGQSRCGGFLVREDFVLTAAHCWG----SNINVTLGAHNIQRREN--TQQHITARR   73 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEESS-STTSCEEEEEEEETTEEEECGGGCC----SCEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEc-CCCCEEEEEEEEcCCEEEEeEEccc----ccccceeeeeeeecccc--ceeeeccee
Confidence            7999999999999999997643 3456899999999999999999985    35789999888766554  467888999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++.||+|+.....+||||++|+.++.++++++|+|||...... .+..+.+.|||.....                    
T Consensus        74 i~~~~~~~~~~~~~diaL~~l~~~~~~~~~~~pi~l~~~~~~~~~~~~~~~~g~g~~~~~--------------------  133 (224)
T d1t32a1          74 AIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMR--------------------  133 (224)
T ss_dssp             EEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSSS--------------------
T ss_pred             EEEeecccccccccceeEEeeccccccCcccCccccccccccCCCCCEEEEecccccccC--------------------
Confidence            9999999999999999999999999999999999999876654 5889999999986541                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (224)
T d1t32a1         134 --------------------------------------------------------------------------------  133 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               .....|+++.+.++++++|++.|.     ..+.++++|+....++.+.|.|||||++
T Consensus       134 ---------~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~c~~~~~~~~~~c~gdsGgPl  185 (224)
T d1t32a1         134 ---------RGTDTLREVQLRVQRDRQCLRIFG-----SYDPRRQICVGDRRERKAAFKGDSGGPL  185 (224)
T ss_dssp             ---------CCCSBCEEEEEEBCCHHHHHHHST-----TCCTTTEEEECCTTSSCBCCTTCTTCEE
T ss_pred             ---------CCcceeeeeeeeecCHHHHHhhcC-----cccccccceeecccccccccccCcCCeE
Confidence                     234679999999999999999874     3577899999877888899999999986

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=5.6e-32  Score=263.01  Aligned_cols=181  Identities=30%  Similarity=0.600  Sum_probs=148.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+++..++|||+|+|..     +.++|+|+||+++||||||||+.+...    .......+.....  ......+.+
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~-----~~~~C~GtLIs~~~VLTaAhCv~~~~~----~~~~~~~~~~~~~--~~~~~~~~~   69 (223)
T d1j16a_           1 IVGGYTCQENSVPYQVSLNS-----GYHFCGGSLINDQWVVSAAHCYKSRIQ----VRLGEHNINVLEG--NEQFVNAAK   69 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEES-----SSEEEEEEEEETTEEEECGGGCCSSCE----EEESCSBTTSCCS--CCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEeC-----CCEEEEEEEEcCCEEEeCHHHCCCcCC----ceeeeeeeccccc--cceeeeeee
Confidence            78999999999999999952     467999999999999999999976321    1111122222221  357788999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+.....+|||||+|++++.|+++++|||||..... .+..+.++|||....+                     
T Consensus        70 ~~~hp~y~~~~~~~diAll~L~~~v~~~~~~~picL~~~~~~-~~~~~~~~g~g~~~~~---------------------  127 (223)
T d1j16a_          70 IIKHPNFDRETYNNDIMLIKLSSPVKLNARVATVALPSSCAP-AGTQCLISGWGNTLSS---------------------  127 (223)
T ss_dssp             EEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSS---------------------
T ss_pred             EEecCCCCccccceeEEEEEecCccccceeEEEEecCCcCCC-CCCEEEEEeeeeeeCC---------------------
Confidence            999999999889999999999999999999999999976543 6899999999987662                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       128 --------------------------------------------------------------------------------  127 (223)
T d1j16a_         128 --------------------------------------------------------------------------------  127 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            ....+..|+.+.+.+++.++|+..+.     ..+.+++||++...++.+.|+||+||++
T Consensus       128 ------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~C~~~~~~~~~~c~gd~g~pl  181 (223)
T d1j16a_         128 ------GVNEPDLLQCLDAPLLPQADCEASSS-----FIITDNMVCVGFLEGGKDACQGDSGGPV  181 (223)
T ss_dssp             ------SCCCCSBCEEEEEEEECHHHHHSSSS-----CCCCTTEEEESCTTCSCBCCTTCTTCEE
T ss_pred             ------CccCcceeeEEEEEEEEhhHhhcccc-----ceeCCCceEEecCCCCCcccCCccCCcE
Confidence                  23346789999999999999997653     3578899999988888899999999986

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=99.98  E-value=4.9e-32  Score=262.74  Aligned_cols=180  Identities=30%  Similarity=0.575  Sum_probs=147.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+++..++|||+|+|.     ++.++|+|+||+++||||||||+.+..  ...+.  .........  ......+.+
T Consensus         1 i~gG~~~~~~~~Pw~v~l~-----~~~~~C~GtLIs~~~VLTAAhCv~~~~--~~~~~--~~~~~~~~~--~~~~~~~~~   69 (222)
T d1hj8a_           1 IVGGYECKAYSQPHQVSLN-----SGYHFCGGSLVNENWVVSAAHCYKSRV--EVRLG--EHNIKVTEG--SEQFISSSR   69 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEE-----SSSEEEEEEEEETTEEEECGGGCCSSC--EEEES--CSBTTSCCS--CCEEEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEE-----CCCEEEEEEEeeCCEEEeCceeccccc--Cccee--eccccccCC--ccccccceE
Confidence            7999999999999999994     235789999999999999999997532  22222  222222222  346677788


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      ++.|+.|+.....+|||||+|++|+.+++.++|||||..... .+..+.+.|||....                      
T Consensus        70 ~~~~~~~~~~~~~~diALl~l~~~v~~~~~~~picl~~~~~~-~~~~~~~~g~~~~~~----------------------  126 (222)
T d1hj8a_          70 VIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMS----------------------  126 (222)
T ss_dssp             EEECTTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSSCCC-TTCEEEEEESSCCCC----------------------
T ss_pred             EEecccccccccCCcEEEEecccceeeeceeEEEECCCcCCC-CCceEEEEecccccc----------------------
Confidence            899999999999999999999999999999999999976543 688999999998865                      


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       127 --------------------------------------------------------------------------------  126 (222)
T d1hj8a_         127 --------------------------------------------------------------------------------  126 (222)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            .......|+++.+.+++.++|+..+.     ..+.+.+|||+...++.+.|+|||||++
T Consensus       127 ------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~C~~~~~~~~~~c~gdsGgPl  180 (222)
T d1hj8a_         127 ------STADSNKLQCLNIPILSYSDCNNSYP-----GMITNAMFCAGYLEGGKDSCQGDSGGPV  180 (222)
T ss_dssp             ------SSCCTTBCEEEEEEBCCHHHHHHHST-----TCCCTTEEEESCTTSSCBCCTTCTTCEE
T ss_pred             ------ccccccccEEEEEEEeCHHHHhhhcc-----cccccceEEEccCCCCcccccCCcccEE
Confidence                  23345689999999999999998874     3578999999988888899999999986

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=99.98  E-value=7.4e-32  Score=259.46  Aligned_cols=181  Identities=30%  Similarity=0.529  Sum_probs=152.1

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCc-eEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSD-LLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~-l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||++|..++|||+|+|++    +..++|+|+||+++||||||||+....... +.+..+......     ..+...|.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~   71 (222)
T d1eq9a_           1 IVGGKDAPVGKYPYQVSLRL----SGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSE-----SGDVYDVE   71 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTS-----CCEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEEeCCEEEECceeccccccccceeeecceecccc-----Ccceeeee
Confidence            79999999999999999986    357899999999999999999998654333 334443332221     35788999


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++++||+|+.....+|||||+|++++.++++++|+||+.......+..|.++|||.+..                     
T Consensus        72 ~~~~h~~y~~~~~~~diAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~g~~~~~~---------------------  130 (222)
T d1eq9a_          72 DAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRL---------------------  130 (222)
T ss_dssp             EEEECTTCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSST---------------------
T ss_pred             eEEEeecccccccccceehhhccCCcccccccccccccccccccccceeEEeeeeeecC---------------------
Confidence            99999999999999999999999999999999999999887666788999999998766                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (222)
T d1eq9a_         131 --------------------------------------------------------------------------------  130 (222)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..|+...+.+++...|.+.+.      .+.+.++|++. .+..+.|++|+||++
T Consensus       131 -------~~~~~~~~~~~~~~~~~~~~c~~~~~------~~~~~~~c~~~-~~~~~~c~~d~G~pl  182 (222)
T d1eq9a_         131 -------GGNTPNALQEIELIVHPQKQCERDQW------RVIDSHICTLT-KRGEGACHGDSGGPL  182 (222)
T ss_dssp             -------TCCCCSBCEEEEEEEECHHHHHHHSS------SCCTTEEEECC-CTTCBCCTTCTTCEE
T ss_pred             -------CCCCCccceEEEEEEechHHhccccc------cccCcceEecc-CCCCCccccCCcCCE
Confidence                   34557889999999999999998763      46789999986 456789999999986

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=99.98  E-value=5.9e-32  Score=262.71  Aligned_cols=186  Identities=28%  Similarity=0.547  Sum_probs=154.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|.+.   +..++|+|+||+++||||||||+.........+..+......    ...+.+.+..
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~---~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~   73 (228)
T d1fxya_           1 IVGGYNCKDGEVPWQALLINE---ENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEE----GGEAVHEVEV   73 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEECT---TSCEEEEEEECSSSEEEECGGGTTSCSSCEEEEECSCTTTCC----CCEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEc---CCCeEEEEEEeeCCEEEECceeeecccccccccccccccccC----Ccceeeeeec
Confidence            789999999999999999753   346889999999999999999998765544445444332221    1356777888


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      ++.|+.|......+||||++|+.++.++++++|||||..... .+..|.++|||.+..+                     
T Consensus        74 ~~~~~~~~~~~~~~diAl~~l~~~~~~~~~~~picL~~~~~~-~~~~~~~~gwg~~~~~---------------------  131 (228)
T d1fxya_          74 VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTASS---------------------  131 (228)
T ss_dssp             EEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCCCSS---------------------
T ss_pred             cceeeeeeccccccceeehhcccccccccccccccccccccc-cccEEEEEecccccCC---------------------
Confidence            999999998899999999999999999999999999987654 5789999999998763                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       132 --------------------------------------------------------------------------------  131 (228)
T d1fxya_         132 --------------------------------------------------------------------------------  131 (228)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                            ....+..|+++.+.+++.++|++.+.     ..+.+.++|++...++.+.|.||+||++.
T Consensus       132 ------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~c~~~~~~~~~~~~gd~G~Pl~  186 (228)
T d1fxya_         132 ------GADYPDELQCLDAPVLSQAKCEASYP-----GKITSNMFCVGFLEGGKDSCQGDSGGPVV  186 (228)
T ss_dssp             ------SCCCCSSCEEEEEEBCCHHHHHHHST-----TTCCTTEEEESCTTCSCBCCTTCTTCEEE
T ss_pred             ------CCCCCchhEEEEEEEeCHHHHhhhcC-----CcccceeeEeecCCCCcccccCccCccEE
Confidence                  23346789999999999999998774     35778999999888888999999999863

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=8.2e-32  Score=262.68  Aligned_cols=190  Identities=33%  Similarity=0.614  Sum_probs=158.4

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||+++..++|||+|.|++.. ....++|+|+||+++||||||||+.... ...+.+..+.........  ..+.+.|.
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~~~-~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~   77 (237)
T d1xx9a_           1 IVGGTASVRGEWPWQVTLHTTS-PTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKE--DTSFFGVQ   77 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEEES-SSEEEEEEEEEEETTEEEECGGGGTTCSCGGGEEEEESCSBGGGCCT--TCCCEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECC-CCccEEEEEEEEeCCEEEeCeEeeecccCccceeeeccccccccccc--ceEEEEee
Confidence            7899999999999999998643 3456889999999999999999997644 344566666555443333  45788999


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                      +++.||+|+.....+|||||+|++++.+.++++||||+...... ....+.+.|||....                    
T Consensus        78 ~~~~h~~~~~~~~~~diAll~L~~~v~~~~~~~pi~~~~~~~~~~~~~~~~~~G~~~~~~--------------------  137 (237)
T d1xx9a_          78 EIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKL--------------------  137 (237)
T ss_dssp             EEEECTTCSCTTTSCCCEEEEESSCCCCBTTBCCCBCCCTTCTTCCCSCEEEEESCCSST--------------------
T ss_pred             EEEEecccccccccceeEEEEeccccccccccceEEecccccccccccccEEEEeecccc--------------------
Confidence            99999999999999999999999999999999999998876554 467899999998765                    


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (237)
T d1xx9a_         138 --------------------------------------------------------------------------------  137 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              .......|++..+.++++++|+..+..    ..+.+.|+|++...+..+.|+|||||++
T Consensus       138 --------~~~~~~~~~~~~~~~~~~~~C~~~~~~----~~~~~~~~c~~~~~~~~~~c~gdsG~pl  192 (237)
T d1xx9a_         138 --------RDKIQNTLQKAKIPLVTNEECQKRYRG----HKITHKMICAGYREGGKDACKGDSGGPL  192 (237)
T ss_dssp             --------TCCCCSBCEEEECCEECHHHHHHHTTT----SCCCTTEEEECCTTCCCBCCTTCTTCEE
T ss_pred             --------cccCCCccEEEEEEEeCHHHHhhhhcC----CCCCCceEEEecCCCCcccccCCcccee
Confidence                    233467899999999999999988743    3578999999987888899999999986

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=99.98  E-value=1.1e-31  Score=259.76  Aligned_cols=183  Identities=31%  Similarity=0.533  Sum_probs=154.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+++..++|||+|+|.+    +..++|+|+||+++||||||||+.........+.++......     ..+.+.+..
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~----~~~~~C~GtLIs~~~VLTaAhC~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~   71 (224)
T d1gdna_           1 IVGGTSASAGDFPFIVSISR----NGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTS-----GGITSSLSS   71 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSS-----SSEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEEeCCEEEECcccceeccccccceeeccccccC-----CcceEEEEE
Confidence            78999999999999999976    457899999999999999999998766666777777655433     347788889


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++.||+|..  ..+|||||+|++++.+++.++|+||+...... .+..|.++|||.+..+                    
T Consensus        72 i~~h~~~~~--~~~DiAll~L~~~v~~~~~~~~i~~~~~~~~~~~~~~~~~~g~g~~~~~--------------------  129 (224)
T d1gdna_          72 VRVHPSYSG--NNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEG--------------------  129 (224)
T ss_dssp             EEECTTCBT--TBSCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTT--------------------
T ss_pred             EEeeecccc--ccceeEEEeeccccccccccceeeccccccccccceeeeeeccCccccC--------------------
Confidence            999998854  46899999999999999999999999776543 5899999999998763                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       130 --------------------------------------------------------------------------------  129 (224)
T d1gdna_         130 --------------------------------------------------------------------------------  129 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             ....+..|++..|+++++++|+..+..    ..+.+.++|++...++.+.|+|||||++
T Consensus       130 -------~~~~~~~l~~~~v~~i~~~~C~~~~~~----~~~~~~~~~~~~~~~~~~~c~~dsG~pl  184 (224)
T d1gdna_         130 -------GSSTPVNLLKVTVPIVSRATCRAQYGT----SAITNQMFCAGVSSGGKDSCQGDSGGPI  184 (224)
T ss_dssp             -------CSCCCSBCEEEEEEEECHHHHHHHHCT----TTSCTTEEEECCTTCCCBCCTTCTTCEE
T ss_pred             -------CCcCCCEeeeeEEEEeCHHHHhccccc----CccccceeeeecCCCCccccccccCCce
Confidence                   233457899999999999999998742    3567889999888888899999999986

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=1.8e-31  Score=258.79  Aligned_cols=181  Identities=27%  Similarity=0.542  Sum_probs=146.0

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|.+++|||+|+|+.    +..++|+|+||+++||||||||+...    ..+.+..........  ......+..
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhC~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~   70 (225)
T d1npma_           1 ILEGRECIPHSQPWQAALFQ----GERLICGGVLVGDRWVLTAAHCKKQK----YSVRLGDHSLQSRDQ--PEQEIQVAQ   70 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCSS----CEEEESCSBTTC--C--CCEEECEEE
T ss_pred             CCCCEECCCCCCCCEEEEEE----CCcEEEEEEEEcCCEEEEchHhCccc----cccccccccccccCC--Ccceeeeee
Confidence            78999999999999999976    35789999999999999999999753    234444444333222  345667777


Q ss_pred             EEECCCC---CCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQF---DPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Y---n~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +..|+.|   +...+.+|||||+|++++.+.++++|||||..... .+..+.++|||.+...                  
T Consensus        71 ~~~~~~~~~~~~~~~~~dIAll~L~~~~~~~~~~~~i~l~~~~~~-~~~~~~~~g~g~~~~~------------------  131 (225)
T d1npma_          71 SIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPK-VGQKCIISGWGTVTSP------------------  131 (225)
T ss_dssp             EEECTTCCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECSSCCC-TTCEEEEEESSCSSSS------------------
T ss_pred             eEEEEeeeccCcccchhhhhhhhcccccccccccccccccccccc-CCceEEEeccceecCC------------------
Confidence            7777765   45667899999999999999999999999987654 5789999999988652                  


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       132 --------------------------------------------------------------------------------  131 (225)
T d1npma_         132 --------------------------------------------------------------------------------  131 (225)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               +...+..||++.+++++.++|++.|.     ..+.+++|||+. .++.+.|+||+||++
T Consensus       132 ---------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~C~~~-~~~~~~c~gd~G~pl  184 (225)
T d1npma_         132 ---------QENFPNTLNCAEVKIYSQNKCERAYP-----GKITEGMVCAGS-SNGADTCQGDSGGPL  184 (225)
T ss_dssp             ---------SCCCCSBCEEEEEEECCHHHHHHHST-----TTCCTTEEEEEC-TTCCBCCTTCTTCEE
T ss_pred             ---------CCCCCCccEEEEEEEecHHHHhhhcc-----CCcCCCEEEecC-CCCCccccCCCCceE
Confidence                     23456789999999999999998874     357899999986 456799999999986

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=99.98  E-value=1.9e-31  Score=258.62  Aligned_cols=192  Identities=28%  Similarity=0.562  Sum_probs=161.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+++.+++|||+|+|++.. ....++|+|+||+++||||||||+.......+.|+.|..+.....   ..+.+.|.+
T Consensus         1 i~gG~~~~~~e~Pw~v~l~~~~-~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~v~~~~~~~~~~~---~~~~~~v~~   76 (241)
T d1m9ua_           1 VIGGTNASPGEFPWQLSQQRQS-GSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTS---GTQTANVDS   76 (241)
T ss_dssp             CBTCEECCTTSSTTEEEEEEES-SSEEEEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCT---TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEeC-CCccEEEEEEEEeCCEEEEChhhcccccCceeeEEEEeeeccccc---cccccccee
Confidence            7999999999999999998643 345789999999999999999999877778889999987765543   368899999


Q ss_pred             EEECCCCCCC--CCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQFDPR--TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Yn~~--t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +++||.|+..  .+++|||||+|++++.+++.++||||+...... .+..+.+.|||....                   
T Consensus        77 ~~~h~~~~~~~~~~~~diall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~~~~~~-------------------  137 (241)
T d1m9ua_          77 YTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDG-------------------  137 (241)
T ss_dssp             EEECTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSS-------------------
T ss_pred             eeeeeeeccccccccccceeeeccceeeeeeceeeeeeeccccccccceEEEEeecccccC-------------------
Confidence            9999999864  467899999999999999999999999765433 688999999999876                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (241)
T d1m9ua_         138 --------------------------------------------------------------------------------  137 (241)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               .+..+..|+.+.++++++++|++.+...+. .......+|++......+.|+||+||++
T Consensus       138 ---------~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~sGgpl  195 (241)
T d1m9ua_         138 ---------TNNLPDILQKSSIPVITTAQCTAAMVGVGG-ANIWDNHICVQDPAGNTGACNGDSGGPL  195 (241)
T ss_dssp             ---------SSCCCSBCEEEEEEBCCHHHHHHHHTTSTT-CCCCTTEEEECCTTSCCBCCTTCTTCEE
T ss_pred             ---------CCCCCCcceEEEEEeechhHhhhhhhcccc-cccccceeEeecccCCcCcccCCCCcce
Confidence                     344578899999999999999998854332 3455777888877778899999999986

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.1e-32  Score=265.75  Aligned_cols=187  Identities=27%  Similarity=0.468  Sum_probs=156.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|..... +..++|+|+||+++||||||||+..    .+.|++|.........  ..+.+.|.+
T Consensus         1 iigG~~a~~~~~Pw~v~l~~~~~-~~~~~C~GtLIs~~~VLTaAhC~~~----~~~v~~g~~~~~~~~~--~~~~~~v~~   73 (227)
T d1fq3a_           1 IIGGHEAKPHSRPYMAYLMIWDQ-KSLKRCGGFLIQDDFVLTAAHCWGS----SINVTLGAHNIKEQEP--TQQFIPVKR   73 (227)
T ss_dssp             CBTCBCCCTTSCTTEEECCEEET-TEEECCEEEEEETTEEEECGGGCCS----EEEEEESCSBTTTTCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEcC-CCcEEEEEEEEeCCEEEeCEeeccc----cccceecccccccccc--ccEEEEEEE
Confidence            78999999999999999976433 4578999999999999999999963    5788999887765444  467899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++.||.|+....+||||||+|++++.|+++|+|+||+...... .+..+.++|||.+..                     
T Consensus        74 i~~~~~~~~~~~~~DiAll~L~~~i~~~~~v~~~~l~~~~~~~~~~~~~~~~G~~~~~~---------------------  132 (227)
T d1fq3a_          74 PIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAP---------------------  132 (227)
T ss_dssp             ECCCTTCCTTTTTTCCEEEEESSCCCCCSSCCCCCCCCSSCCCCTTCEEECCCSCCSTT---------------------
T ss_pred             EEecccCCCCCCCcchhhhhcccccccceeEEEEeecccccccCCCCEEEEEeeccccC---------------------
Confidence            9999999999999999999999999999999999999876554 588999999999866                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       133 --------------------------------------------------------------------------------  132 (227)
T d1fq3a_         133 --------------------------------------------------------------------------------  132 (227)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                             .+.....|+++.+.+++++.|++.+...    .....++|+....++.+.|+|||||++.
T Consensus       133 -------~~~~~~~l~~~~~~~~~~~~C~~~~~~~----~~~~~~~~~~~~~~~~~~~~gdsG~pl~  188 (227)
T d1fq3a_         133 -------LGKHSHTLQEVKMTVQEDRKCESDLRHY----YDSTIELCVGDPEIKKTSFKGDSGGPLV  188 (227)
T ss_dssp             -------TSCCCSBCCBCEEECCCHHHHTTTCTTT----CCTTTEECCSCTTSSCBCCTTCTTCBCB
T ss_pred             -------cccccccceEEEEEEEcHHHhhhhhccc----ccccceeeeeccccccccccCCCCceEE
Confidence                   2334567999999999999999877522    3445566666567788999999999974

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=99.98  E-value=6.8e-32  Score=262.42  Aligned_cols=182  Identities=27%  Similarity=0.529  Sum_probs=153.8

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.+|..++|||+|+|++    +..++|+|+||+++||||||||+..  .....+++|.........  ..+...|.+
T Consensus         1 i~gG~~a~~~~~Pw~V~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~--~~~~~~~~g~~~~~~~~~--~~~~~~v~~   72 (226)
T d1azza_           1 IVGGVEAVPNSWPHQAALFI----DDMYFCGGSLISPEWILTAAHCMDG--AGFVDVVLGAHNIREDEA--TQVTIQSTD   72 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTTEEEEEEEEETTEEEECHHHHTT--CSCEEEEESCSBSSSCCT--TCEEEEECC
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCcEEEEEEEeeCCEEEEChhhccC--CcceEEEeccceeccCCc--ceEEEEeee
Confidence            78999999999999999986    3468999999999999999999975  355778888888766544  467889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||+|+....++|||||+|++++.++++++||||+..... .+..+.++|||.....                     
T Consensus        73 i~~~~~y~~~~~~~diAll~l~~~~~~~~~~~pi~l~~~~~~-~~~~~~~~g~g~~~~~---------------------  130 (226)
T d1azza_          73 FTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDVG-VGTVVTPTGWGLPSDS---------------------  130 (226)
T ss_dssp             EEECTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSCCC-TTCEEEEEESSCSSTT---------------------
T ss_pred             eeeccccccccccchhhhhhcCCccceeeccccccccccccc-cccceeeecccccCCC---------------------
Confidence            999999999999999999999999999999999999987654 5889999999998762                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (226)
T d1azza_         131 --------------------------------------------------------------------------------  130 (226)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            .......|+++.+++++.++|++.+.      ...+.++|... .++.++|+|||||++
T Consensus       131 ------~~~~~~~l~~~~~~~~~~~~C~~~~~------~~~~~~~~~~~-~~~~~~c~gdsG~Pl  182 (226)
T d1azza_         131 ------ALGISDVLRQVDVPIMSNADCDAVYG------IVTDGNICIDS-TGGKGTCNGDSGGPL  182 (226)
T ss_dssp             ------CSSSCSBCEECCEEEECHHHHHHHHS------CCCTTEEEECC-TTTCBCCTTCTTCEE
T ss_pred             ------cCccccEeEEEEEEEEeHHHhhhhhC------cccccceeccc-cCCCccccCCcCCCE
Confidence                  22345689999999999999999874      23455666653 567899999999986

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-32  Score=270.90  Aligned_cols=186  Identities=30%  Similarity=0.578  Sum_probs=155.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-----CCceEEEEccccCCCCCCCCCcEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-----PSDLLLRLGEHDLSTEEEPYGYQE  465 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-----~~~l~V~LG~~dl~~~~~~~~~q~  465 (697)
                      |+||..|..++|||+|+|..      .++|+|+||+++||||||||+.+..     ...+.|++|.++.....   ..+.
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~------~~~C~GtLIs~~~VLTaAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~---~~~~   71 (240)
T d2qy0b1           1 IIGGQKAKMGNFPWQVFTNI------HGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELM---KLGN   71 (240)
T ss_dssp             CBSCEECCTTSSTTEEEEES------SSEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHH---HHCC
T ss_pred             CCCCEECCCCCcCCEEEECC------CceEEEEEEcCCEEEEChHhCCCcccccccccceeeeeeeccccccC---Ccce
Confidence            79999999999999999864      3579999999999999999997532     33578999987654322   2355


Q ss_pred             EEEEEEEECCCCCCC---CCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccc
Q psy12777        466 RRVQIVASHPQFDPR---TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATR  541 (697)
Q Consensus       466 ~~V~~IiiHP~Yn~~---t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~  541 (697)
                      +.|.+|++||+|+..   .+.+|||||+|++|+.++++++||||+...... .+..+++.|||....+            
T Consensus        72 ~~v~~i~vhp~y~~~~~~~~~~DiAll~L~~pi~~~~~v~pi~l~~~~~~~~~~~~~~~~g~g~~~~~------------  139 (240)
T d2qy0b1          72 HPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK------------  139 (240)
T ss_dssp             CCEEEEEECTTCCTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSS------------
T ss_pred             EEEEEEEeccccccccccccCCCceEEecCCccccccccceEEecccccccccCceeeeccccccccc------------
Confidence            789999999999864   357899999999999999999999999876554 4889999999997652            


Q ss_pred             ccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeee
Q psy12777        542 QEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQ  621 (697)
Q Consensus       542 ~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~  621 (697)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (240)
T d2qy0b1         140 --------------------------------------------------------------------------------  139 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        622 NCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       622 ~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                        .+..++.+.+.+++.+.|+..+........+.+++||++...++.+.|.||||+|+
T Consensus       140 ------------------~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gdsG~pl  195 (240)
T d2qy0b1         140 ------------------IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVF  195 (240)
T ss_dssp             ------------------CCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEE
T ss_pred             ------------------ccccceEEEEEEcCHHHHHHHhhccccCCceecceEEeccCCccceeeccccccce
Confidence                              24678899999999999999887666556688999999988888999999999986

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=258.71  Aligned_cols=183  Identities=23%  Similarity=0.399  Sum_probs=156.2

Q ss_pred             CCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEE
Q psy12777        393 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVA  472 (697)
Q Consensus       393 GG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~Ii  472 (697)
                      ||++|.+++|||+|+|++.......++|+|+||+++||||||||+..    .+.|++|.+++....+  ..+...+.+++
T Consensus         1 GG~~a~~~e~Pw~v~i~~~~~~~~~~~C~G~LIs~~~VLTaAhCv~~----~~~v~~g~~~~~~~~~--~~~~~~~~~~~   74 (224)
T d1nn6a_           1 GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGR----SITVTLGAHNITEEED--TWQKLEVIKQF   74 (224)
T ss_dssp             CCEECCTTSSTTEEEEEEECTTSCEEEEEEEEEETTEEEECGGGCCS----EEEEEESCSBTTSCCT--TCEEEEEEEEE
T ss_pred             CCcCCcCCCCCCEEEEEEEeCCCCceEEEEEEEeCCEEEehhhcccc----cceEEecccccccccc--cccceeEEEEE
Confidence            89999999999999998766556678999999999999999999963    5789999998877655  46889999999


Q ss_pred             ECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccccc
Q psy12777        473 SHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHF  551 (697)
Q Consensus       473 iHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~~  551 (697)
                      .||+|+.....+|||||+|..++.++..++||||+...... .+..+.+.||+....                       
T Consensus        75 ~~p~~~~~~~~~diall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~~~~~~-----------------------  131 (224)
T d1nn6a_          75 RHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGV-----------------------  131 (224)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCSCCCCCCTTCEEEEEECCCCSS-----------------------
T ss_pred             EeecccccccccchhhhcccCCcccccccccccccccccccCCCceeeecccccccc-----------------------
Confidence            99999999999999999999999999999999999876544 588999999988765                       


Q ss_pred             CCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccccc
Q psy12777        552 LGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLW  631 (697)
Q Consensus       552 ~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~W  631 (697)
                                                                                                      
T Consensus       132 --------------------------------------------------------------------------------  131 (224)
T d1nn6a_         132 --------------------------------------------------------------------------------  131 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        632 KMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       632 g~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                           .+..+..|+++.+.++++++|++.+.      .....++|+.......+.|+|||||++
T Consensus       132 -----~~~~~~~~~~~~~~~~~~~~C~~~~~------~~~~~~~~~~~~~~~~~~c~gDsG~PL  184 (224)
T d1nn6a_         132 -----LKPGSDTLQEVKLRLMDPQACSHFRD------FDHNLQLCVGNPRKTKSAFKGDSGGPL  184 (224)
T ss_dssp             -----SCCCCSBCEEEEEEBCCGGGGTTSTT------CCTTTEEEECCTTTC--CCCCCTTCEE
T ss_pred             -----CCCccccceEEEEEecCHHHHhhhcc------cccceeeeccCccccccccCCCccceE
Confidence                 23446789999999999999987663      345677888766777889999999986

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=2.1e-31  Score=256.97  Aligned_cols=181  Identities=28%  Similarity=0.567  Sum_probs=155.8

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|+     ++.++|+|+||+++||||||||+.+    ...+++|..++.....  ..+...+.+
T Consensus         1 i~GG~~a~~~~~Pw~v~l~-----~~~~~C~GtLIs~~~VLTaAhC~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~   69 (223)
T d1hj9a_           1 IVGGYTCGANTVPYQVSLN-----SGYHFCGGSLINSQWVVSAAHCYKS----GIQVRLGEDNINVVEG--NEQFISASK   69 (223)
T ss_dssp             CCSCEECCTTSSTTEEEEE-----SSSEEEEEEEEETTEEEECGGGCCS----SCEEEESCSSTTSCCS--CCEEEEEEE
T ss_pred             CCCCEECCCCCCCeEEEEE-----CCCEEEEEEEeeCCEEEeCeeECCC----cCcceecccccccccc--eeeeeceee
Confidence            7899999999999999995     2467899999999999999999964    3456788777665444  467889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      +++||.|+...+.+|||||+|++++.+++.++|+||+..... .+..+.+.|||.+..+                     
T Consensus        70 ~~~~~~~~~~~~~~diAll~l~~~~~~~~~~~p~cl~~~~~~-~~~~~~~~g~~~~~~~---------------------  127 (223)
T d1hj9a_          70 SIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSS---------------------  127 (223)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSS---------------------
T ss_pred             EEeccccccccccchhhhhhcccceeeeeeeecccccccccc-ccceEEEEeeccccCC---------------------
Confidence            999999999999999999999999999999999999987654 5788999999887652                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       128 --------------------------------------------------------------------------------  127 (223)
T d1hj9a_         128 --------------------------------------------------------------------------------  127 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            ....+..|+...+++++.++|++.|.     ..+.+.++|++...++.+.|+||+|+++
T Consensus       128 ------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~c~~~~~~~~~~~~gd~g~pl  181 (223)
T d1hj9a_         128 ------GTSYPDVLKCLKAPILSDSSCKSAYP-----GQITSNMFCAYGLEGKGDSCQGDSGGPV  181 (223)
T ss_dssp             ------SCCCCSSCEEEEEECCCHHHHHHHST-----TTCCTTEEECCCCCCCCCCCTTCTTCEE
T ss_pred             ------CCCCCccceEEEEeecCHHHHHHHhC-----CcccccceEEeecCCCcccccCCCCcee
Confidence                  24456789999999999999999874     3578899999987888899999999986

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.2e-31  Score=254.37  Aligned_cols=186  Identities=29%  Similarity=0.494  Sum_probs=156.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|++    +..++|+|+||+++||||||||+.+.....+.+..+..+......  ..+.+.|.+
T Consensus         1 I~gG~~~~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~v~~~~~~~~~~~~--~~~~~~v~~   74 (228)
T d1bioa_           1 ILGGREAEAHARPYMASVQL----NGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEP--SKRLYDVLR   74 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGGGGCSSSCEEEEESCSBSSSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCcEEEEEEEEeCCEEEECceeeeccccceeeeeccccccccCCc--ceeecccee
Confidence            79999999999999999986    357899999999999999999998877777888887776654443  468889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++|+.|+....++|||||+|++++.++++++|+|||...... .+..+.+.|||.+..                     
T Consensus        75 i~~~~~y~~~~~~~diAll~l~~~~~~~~~v~p~~l~~~~~~~~~~~~~~~~g~~~~~~---------------------  133 (228)
T d1bioa_          75 AVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNH---------------------  133 (228)
T ss_dssp             EEECTTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTCEEEEEESSCCST---------------------
T ss_pred             eeeeecccCCCcccceehhhccccceeeeEEeeecccccccccccCceEEEecceeecC---------------------
Confidence            9999999999999999999999999999999999999765543 588999999998866                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (228)
T d1bioa_         134 --------------------------------------------------------------------------------  133 (228)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .+..+..|+...+++++.++|...+..    ......++|+.. ..+.+.|.|||||++
T Consensus       134 -------~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~gdsG~Pl  187 (228)
T d1bioa_         134 -------AGRRPDSLQHVLLPVLDRATCNRRTHH----DGAITERLMCAE-SNRRDSCKGDSGGPL  187 (228)
T ss_dssp             -------TCCCCSBCEEEEEEEECHHHHHSTTTT----TTCCCTTEEEEC-CSSCBCCTTTTTCEE
T ss_pred             -------CCCCCCcceEEEEEEeCHHHHhhhhcc----cccccccceeec-ccCCCcccCCcCccE
Confidence                   344467899999999999999987642    234455667664 556799999999986

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=2.4e-31  Score=257.78  Aligned_cols=185  Identities=28%  Similarity=0.452  Sum_probs=155.9

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|.+... +..++|+|+||+++||||||||+..    ...+++|........+  ..+.+.|.+
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~~~-~~~~~C~GtLIs~~~VLTaAhC~~~----~~~~~~~~~~~~~~~~--~~~~~~V~~   73 (224)
T d1eufa_           1 IIGGHEAKPHSRPYMAFLLFKTS-GKSHICGGFLVREDFVLTAAHCLGS----SINVTLGAHNIMERER--TQQVIPVRR   73 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESS-SSEEEEEEEEEETTEEEECGGGCCE----EEEEEESCSBTTSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEcC-CCcEEEEEEEEcCCEEEeeceeccc----ccceeeeeeeecccCC--CcEEEEEEE
Confidence            79999999999999999987543 4578999999999999999999863    4567888777765444  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +++||+|+....+||||||||++|+.|+++++|+||+...... .+..+.+.|||....                     
T Consensus        74 i~~hp~~~~~~~~~DiAll~L~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~g~~~~---------------------  132 (224)
T d1eufa_          74 PIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGV---------------------  132 (224)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSST---------------------
T ss_pred             EEECCccccccccccceeeeccceeEEeeeEeeeeeecccccccCCceEEEecccceec---------------------
Confidence            9999999999999999999999999999999999999876544 588999999999876                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       133 --------------------------------------------------------------------------------  132 (224)
T d1eufa_         133 --------------------------------------------------------------------------------  132 (224)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                             .......++...+.++++++|+..+..     .....++|.+....+.+.|.|||||++
T Consensus       133 -------~~~~~~~~~~~~~~~~~~~~C~~~~~~-----~~~~~~~~~~~~~~~~~~c~~dsGgpl  186 (224)
T d1eufa_         133 -------NMPSTDKLQEVDLEVQSEEKCIARFKN-----YIPFTQICAGDPSKRKNSFSGDSGGPL  186 (224)
T ss_dssp             -------TCCBCSBCEEEEEEBCCTHHHHTTCTT-----CCTTTEEEESCTTSCCBCCTTCTTCEE
T ss_pred             -------cccccccceeeeeccCCHHHHHHHhcc-----ccccceeeeeccccccccccCCCCCeE
Confidence                   233456789999999999999987642     345677777766777899999999986

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-31  Score=262.63  Aligned_cols=186  Identities=28%  Similarity=0.550  Sum_probs=154.1

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccC--CCCCceEEEEccccCCCCCCCCCcEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~--~~~~~l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      |+||++|..++|||||+|+.      .++|+|+||+++||||||||+.+  .....+.|.+|..+....    ..+.+.|
T Consensus         1 i~gG~~~~~g~~Pw~v~i~~------~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~v~~~~~~~~~~----~~~~~~v   70 (242)
T d1q3xa1           1 IYGGQKAKPGDFPWQVLILG------GTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSP----HYTQAWS   70 (242)
T ss_dssp             CBSCEECCTTSSTTEEEECS------SSSEEEEEETTTEEEECHHHHHHHHTTTCCCEEEESCSBTTCS----CSEEEEE
T ss_pred             CCCCEECCCCCcCcEEEEcC------CCEEEEEEEcCCEEEEChhhccCCCCCcceEEEEeeeeeeccc----cccccce
Confidence            79999999999999999952      46899999999999999999865  345567888887655432    3578899


Q ss_pred             EEEEECCCCCCCC-CCCceEEEecCcccccCCCeeeeecCCCCCCC---CCCEEEEEeccccCCCCccccCCCCcccccc
Q psy12777        469 QIVASHPQFDPRT-FEYDLALLRFYEPVKFQPNIIPICVPEDDTNF---VGTSAHVTGWGRLYEGRFRRSYGHPATRQEM  544 (697)
Q Consensus       469 ~~IiiHP~Yn~~t-~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~---~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s  544 (697)
                      .++++||+|+... ..||||||||++|+.|+++++||||+......   .+..+...|||....                
T Consensus        71 ~~i~~hp~y~~~~~~~~DiAll~L~~~~~~~~~v~pic~~~~~~~~~~~~~~~~~~~g~~~~~~----------------  134 (242)
T d1q3xa1          71 EAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQR----------------  134 (242)
T ss_dssp             EEEEECTTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESSCCTT----------------
T ss_pred             eeeEEeeccccccccCccccccccCCCccccccEEEEeccccccccccccceeeeeeecccccc----------------
Confidence            9999999998655 68999999999999999999999998765432   477888889988755                


Q ss_pred             cccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccc
Q psy12777        545 ATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCR  624 (697)
Q Consensus       545 ~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~  624 (697)
                                                                                                      
T Consensus       135 --------------------------------------------------------------------------------  134 (242)
T d1q3xa1         135 --------------------------------------------------------------------------------  134 (242)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCC-cccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        625 RRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAG-FIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       625 ~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~-~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                   +..+..|+.+.+++++.++|++.|.... ....+.+.++|++...+..+.|.||+||++
T Consensus       135 -------------~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~gdsGgpl  193 (242)
T d1q3xa1         135 -------------GFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGAL  193 (242)
T ss_dssp             -------------SSCCSBCEEEEEEEECHHHHHHHTSSTTSCTTCSCTTEEEECCSSCCSBCCTTCTTCEE
T ss_pred             -------------CccccceeeeeccccCHHHHHhhhhcccccCceeccceeeeeccCCCccccccccccce
Confidence                         2345789999999999999999885432 234567889999988888899999999986

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=4.2e-31  Score=257.65  Aligned_cols=182  Identities=31%  Similarity=0.597  Sum_probs=153.9

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+++..++|||+|+|++    +..|+|+|+||+++||||||||+..    ...|++|...+.....  ..+.+.+.+
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~----~~~~~C~GtLIs~~~VLTaAhCv~~----~~~v~~~~~~~~~~~~--~~~~~~~~~   70 (237)
T d1ao5a_           1 VVGGFNCEKNSQPWQVAVYY----QKEHICGGVLLDRNWVLTAAHCYVD----QYEVWLGKNKLFQEEP--SAQHRLVSK   70 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECTTCCCS----SCEEEESCCBSSSCCS--SCEECCEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCcEEEEEEEeeCCEEEECHHHcCC----CceEEEEecccccccc--ccEEEEEEE
Confidence            79999999999999999986    4578999999999999999999964    4578999888766544  467888999


Q ss_pred             EEECCCCCCC-----------CCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCc
Q psy12777        471 VASHPQFDPR-----------TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPA  539 (697)
Q Consensus       471 IiiHP~Yn~~-----------t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~  539 (697)
                      ++.||.|+..           .+.+|||||||++++.+++.++|+|||..... .+..|.++|||....+          
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~DiAll~L~~~i~~~~~~~~i~lp~~~~~-~~~~~~~~g~~~~~~~----------  139 (237)
T d1ao5a_          71 SFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPK-PGSKCLASGWGSITPT----------  139 (237)
T ss_dssp             EEECTTSCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCSCCC-TTCEEEEEESCCSSCC----------
T ss_pred             EeecccccccccccccccCccccccceeeeccCcccccccccceeccCCCCCc-ccceEEEeeeeeeccc----------
Confidence            9999998642           24689999999999999999999999987654 5789999999987652          


Q ss_pred             ccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeee
Q psy12777        540 TRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI  619 (697)
Q Consensus       540 ~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~  619 (697)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (237)
T d1ao5a_         140 --------------------------------------------------------------------------------  139 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        620 IQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       620 ~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                       ....+..|+...+..++.+.|+..+.     ..+.++++|++...++.+.|.|||||++
T Consensus       140 -----------------~~~~~~~~~~~~~~~~~~~~c~~~~~-----~~~~~~~~~~~~~~~~~~~c~gdsG~pl  193 (237)
T d1ao5a_         140 -----------------RWQKPDDLQCVFITLLPNENCAKVYL-----QKVTDVMLCAGEMGGGKDTCRDDSGGPL  193 (237)
T ss_dssp             ------------------CCCCSBCEEEEEEEECHHHHHHHCS-----SCCCTTEEEEECTTCSCBCCTTCTTCEE
T ss_pred             -----------------cccCCccceeeEEEEEehHHhhhhhc-----CCCCCCeEEEccCCCCCcccCCCCCCee
Confidence                             22345679999999999999998764     3577899999977778899999999986

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.4e-31  Score=257.30  Aligned_cols=191  Identities=34%  Similarity=0.642  Sum_probs=152.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCc--eEEEEccccCCCCCCCCCcEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSD--LLLRLGEHDLSTEEEPYGYQERRV  468 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~--l~V~LG~~dl~~~~~~~~~q~~~V  468 (697)
                      |+||++|..++|||+|+|++. .....++|+|+||+++||||||||+.+.....  +.+.++......     ..+.+.|
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~-~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i   74 (243)
T d2fpza1           1 IVGGQEAPRSKWPWQVSLRVH-GPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYY-----QDQLLPV   74 (243)
T ss_dssp             CBSCEECCTTSCTTEEEEEEC-SSSCEEEEEEEEEETTEEEECHHHHCSBCCCGGGEEEECCCSBTTT-----TCCCEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEC-CCcccEEEEEEEEeCCEEEECceeccCCCCcceeEEEEeeeccccc-----ccEEEee
Confidence            789999999999999999763 33456789999999999999999997644333  344444333322     3578899


Q ss_pred             EEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        469 QIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       469 ~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      .++++||+|+....+||||||+|++|+.++++++|+|||...... .+..+.+.|||....+.                 
T Consensus        75 ~~i~~hp~~~~~~~~~diAli~L~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~-----------------  137 (243)
T d2fpza1          75 SRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDE-----------------  137 (243)
T ss_dssp             EEEEECTTCSCTTTSCCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESSCSBTTB-----------------
T ss_pred             eeeeccccccccccccchhhhcccCccccceeEEEeecCchhhccCCCceeEEEecccccCCC-----------------
Confidence            999999999999999999999999999999999999999776544 57899999999887631                 


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (243)
T d2fpza1         138 --------------------------------------------------------------------------------  137 (243)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcc----cCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFI----EHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~----~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               ....+..|+++.++++++++|+..|......    ..+...++|++  ..+.+.|.|||||++
T Consensus       138 ---------~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gdsGgpl  198 (243)
T d2fpza1         138 ---------RLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSGGPL  198 (243)
T ss_dssp             ---------CCCTTCBCEEEEEEEECHHHHHHHHHTTBCSCTTSCSSCTTEEEEC--CSSSBCCTTCTTCEE
T ss_pred             ---------cCCCCcEeEEEEEeecCHHHhhhhhhcccccCCccceeeeeeEecC--CCCCCCccCCCCCeE
Confidence                     2344678999999999999999988543221    13456677776  556799999999986

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-30  Score=254.29  Aligned_cols=190  Identities=31%  Similarity=0.585  Sum_probs=156.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+.|..++|||+|+|+..   +..++|+|+||+++||||||||+.+  ...+.|++|..+......  ..+...|.+
T Consensus         1 i~~G~~~~~~e~Pw~v~i~~~---~~~~~C~GtLIs~~~VLTaAhCv~~--~~~~~v~~g~~~~~~~~~--~~~~~~v~~   73 (240)
T d1autc_           1 LIDGKMTRRGDSPWQVVLLDS---KKKLACGAVLIHPSWVLTAAHCMDE--SKKLLVRLGEYDLRRWEK--WELDLDIKE   73 (240)
T ss_dssp             CBSCEECCTTSCTTEEEEECT---TSCEEEEEEEEETTEEEECGGGSSS--CSCCEEEESCCBTTCCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEC---CCCEEEEEEEEeCCEEEECceeccC--cccceeeccccccccccc--cceeeeeec
Confidence            789999999999999999752   3468999999999999999999975  355789999888765554  468899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC-----CCCCCEEEEEeccccCCCCccccCCCCccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT-----NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMA  545 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~-----~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~  545 (697)
                      +++||+|+.....+|||||||++|+.|+++|+|||||....     ...+..+.+.|||......               
T Consensus        74 i~~~~~~~~~~~~~DiAli~L~~~v~~~~~v~picL~~~~~~~~~~~~~~~~~~~~g~g~~~~~~---------------  138 (240)
T d1autc_          74 VFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSRE---------------  138 (240)
T ss_dssp             EEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCC---------------
T ss_pred             cccceeeeccccccceeEEEeCCcccCCcccccceeccCcccccccccCCCeEEEEeeccccCCC---------------
Confidence            99999999999999999999999999999999999997532     2358899999999986520               


Q ss_pred             ccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccc
Q psy12777        546 TCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRR  625 (697)
Q Consensus       546 ~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~  625 (697)
                                                                                                      
T Consensus       139 --------------------------------------------------------------------------------  138 (240)
T d1autc_         139 --------------------------------------------------------------------------------  138 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        626 RESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       626 ~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              ..........|+...+++++.+.|...+.     .......+|+.....+.+.|.||+||++
T Consensus       139 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gd~G~pl  195 (240)
T d1autc_         139 --------KEAKRNRTFVLNFIKIPVVPHNECSEVMS-----NMVSENMLCAGILGDRQDACEGDSGGPM  195 (240)
T ss_dssp             --------SCCCSSCSSBCEEEEEEEECHHHHHHHCS-----SCCCTTEEEECCTTCCCBCCTTCTTCEE
T ss_pred             --------cccccccceeeecceeeEEeehhhhhhcc-----cccccceeeeccccccCCCcCCccCcee
Confidence                    00022345678999999999999998764     2355677777766777899999999986

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.8e-31  Score=259.82  Aligned_cols=188  Identities=31%  Similarity=0.571  Sum_probs=151.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++..++|||+|+|.+    ...++|+|+||+++||||||||+.+.......+..+........  ...+.+.+.+
T Consensus         1 i~gG~~~~~~e~Pw~v~I~~----~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~   74 (255)
T d1z8ga1           1 IVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQAS--PHGLQLGVQA   74 (255)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTC--TTSEEECEEE
T ss_pred             CCCCEECCCCCcCcEEEEEE----CCcEEEEEEEEeCCEEEECceecCCCCCccceeeEeeeeecccC--CccEEEEEEE
Confidence            78999999999999999986    34689999999999999999999864433333333322222222  2467888999


Q ss_pred             EEECCC------CCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccc
Q psy12777        471 VASHPQ------FDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQE  543 (697)
Q Consensus       471 IiiHP~------Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~  543 (697)
                      ++.||.      |+.....||||||||++++.|+++++|+||+...... .+..+.+.||+....               
T Consensus        75 ~~~h~~~~~~~~~~~~~~~~DiAll~L~~~v~~~~~~~p~~l~~~~~~~~~~~~~~~~G~~~~~~---------------  139 (255)
T d1z8ga1          75 VVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQY---------------  139 (255)
T ss_dssp             EEEETTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSST---------------
T ss_pred             EEEEeeeccccccccCCccccEEEEecCCccccCcccccceecccCcccCCCcEEEeeccccccC---------------
Confidence            999998      5556678999999999999999999999999875433 589999999988765               


Q ss_pred             ccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecc
Q psy12777        544 MATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNC  623 (697)
Q Consensus       544 s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~  623 (697)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (255)
T d1z8ga1         140 --------------------------------------------------------------------------------  139 (255)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        624 RRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       624 ~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                   .+..+..|+.+.+++++++.|+..+..   ...+.+.++|++...++.+.|+||+||++
T Consensus       140 -------------~~~~~~~l~~~~~~~~~~~~C~~~~~~---~~~~~~~~~~~~~~~~~~~~c~gdsGgPl  195 (255)
T d1z8ga1         140 -------------YGQQAGVLQEARVPIISNDVCNGADFY---GNQIKPKMFCAGYPEGGIDACQGDSGGPF  195 (255)
T ss_dssp             -------------TSCBCSBCEEEEEEEECHHHHTSTTTT---TTCCCTTEEEESCTTCSCBCCTTCTTCEE
T ss_pred             -------------CCcccceeEEEEEEEeCHHHhhhhhcc---CccccCcceEEecCCCCcccccCccccce
Confidence                         234457899999999999999976643   23678899999888888899999999986

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-30  Score=254.40  Aligned_cols=182  Identities=26%  Similarity=0.375  Sum_probs=147.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||.++.. .|||||+|++    ++.|+|+|+||+++||||||||+.+.+...+.|++|.++..........+.+.+.+
T Consensus         1 ~~~g~~~~~-~~~w~vsi~~----~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~   75 (234)
T d1si5h_           1 VVNGIPTRT-NIGWMVSLRY----RNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQ   75 (234)
T ss_dssp             CBSCEECSS-CCTTEEEEEE----SSSEEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEE
T ss_pred             CCCCEeCCC-CcCeEEEEEE----CCcEEEEEEEEeCCEEEECcCccCCCCCccceEEEEeecccccccceeEEEEeecc
Confidence            789999976 4999999987    34689999999999999999999887778899999998876654443456677777


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      +..|++|      +|||||||++++.++++|+|||||...... .+..+.+.|||....                     
T Consensus        76 ~~~~~~~------~DIAll~L~~~v~~~~~v~picl~~~~~~~~~~~~~~~~g~~~~~~---------------------  128 (234)
T d1si5h_          76 LVYGPEG------SDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGL---------------------  128 (234)
T ss_dssp             EEECSST------TCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCC---------------------
T ss_pred             ccCCCcc------cceEEEeeccCccccccccccccccccccCCcceeEEEeccccccc---------------------
Confidence            7777765      799999999999999999999999876554 477788888876654                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       129 --------------------------------------------------------------------------------  128 (234)
T d1si5h_         129 --------------------------------------------------------------------------------  128 (234)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              ......||++.+.+++.+.|...+..   ...+.+++||++...++.+.|+||+||++
T Consensus       129 --------~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~C~~~~~~~~~~c~gdsG~pl  183 (234)
T d1si5h_         129 --------INYDGLLRVAHLYIMGNEKCSQHHRG---KVTLNESEICAGAEKIGSGPCEGDYGGPL  183 (234)
T ss_dssp             --------SSCCCBCEEEEEEEECGGGTCC----------CCTTEEEEECSSSCCBCCTTCTTCEE
T ss_pred             --------ccccceeEEEEeeccchhHhhhhhcc---ccccCCccEEEccCCcCCCCCcCccccce
Confidence                    22357899999999999999987642   23578999999988888899999999986

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-30  Score=250.95  Aligned_cols=132  Identities=28%  Similarity=0.470  Sum_probs=112.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|+.    +..++|+|+||+++||||||||+.+.......++++..++.....  ......+..
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   74 (225)
T d1a7sa_           1 IVGGRKARPRQFPFLASIQN----QGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRER--QSRQTFSIS   74 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCT--TTCEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCcEEEEEEEEcCCEEEECeeeeeeccccceeeEEeeeecccccc--cccceeeee
Confidence            79999999999999999976    357899999999999999999998877778889998887765544  356677888


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCC
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYE  528 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~  528 (697)
                      ++.|+.|+.....||||||||++++.+.++++|+||+...... .+..+.++|||....
T Consensus        75 ~~~~~~~~~~~~~~DIAll~L~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~  133 (225)
T d1a7sa_          75 SMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRS  133 (225)
T ss_dssp             EEECSSCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSST
T ss_pred             eeeeeeccccccccccchhhcCCcccccccceeEEeeccccccCCCceeEecccccccc
Confidence            9999999999999999999999999999999999998765544 588999999998766

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.6e-31  Score=261.16  Aligned_cols=195  Identities=29%  Similarity=0.521  Sum_probs=147.5

Q ss_pred             CCCcCC---CCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCC
Q psy12777        381 CGRRLF---PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTE  457 (697)
Q Consensus       381 CG~~~~---~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~  457 (697)
                      ||+...   ...||+||+++..++|||+|+|.       .++|+|+||+++||||||||+.+.  ....|++|..++...
T Consensus         1 cg~~~~~~~~~~ri~gG~~~~~~~~Pw~v~l~-------~~~C~GtLIs~~~VLTaAhCv~~~--~~~~v~~g~~~~~~~   71 (259)
T d1elva1           1 CGVPREPFEEKQRIIGGSDADIKNFPWQVFFD-------NPWAGGALINEYWVLTAAHVVEGN--REPTMYVGSTSVQTS   71 (259)
T ss_dssp             CSCCSSCC-----CBTCEECCGGGSTTEEEEE-------TTEEEEEEEETTEEEECHHHHTTC--SSCCEECSCSBCC--
T ss_pred             CcCCCCCCCCCCceECCEECCCCCcceEEEeC-------CceEEEEEEeCCEEEecccccccc--cceeEEeeeeeeecc
Confidence            777433   36799999999999999999994       358999999999999999999764  345677887776543


Q ss_pred             CCCCCcEEEEEEEEEECCCCC-------CCCCCCceEEEecCcccccCCCeeeeecCCCCCC---CCCCEEEEEeccccC
Q psy12777        458 EEPYGYQERRVQIVASHPQFD-------PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTN---FVGTSAHVTGWGRLY  527 (697)
Q Consensus       458 ~~~~~~q~~~V~~IiiHP~Yn-------~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~---~~G~~c~VtGWG~t~  527 (697)
                      ... ..+.+.|.++++||.|.       ...++||||||||++++.++++|+||||+.....   ..+..+++.|||.+.
T Consensus        72 ~~~-~~~~~~v~~i~~hp~~~~~~~~~~~~~~~~DIAllkL~~~~~~~~~v~pic~~~~~~~~~~~~~~~~~~~g~~~~~  150 (259)
T d1elva1          72 RLA-KSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTE  150 (259)
T ss_dssp             ------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCS
T ss_pred             ccc-ccccccceeEeecceeecccccccCCCcccceeeeecccceehhcccCceeeccCccccccccceEEEEecccccc
Confidence            322 45778899999999995       3456799999999999999999999999876542   358899999999876


Q ss_pred             CCCccccCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecc
Q psy12777        528 EGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH  607 (697)
Q Consensus       528 ~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAH  607 (697)
                      ..                                                                              
T Consensus       151 ~~------------------------------------------------------------------------------  152 (259)
T d1elva1         151 KR------------------------------------------------------------------------------  152 (259)
T ss_dssp             SC------------------------------------------------------------------------------
T ss_pred             cc------------------------------------------------------------------------------
Confidence            52                                                                              


Q ss_pred             cccccccceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCC----cccCcCCCeEEEeeCCCC
Q psy12777        608 CVEDLWSQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAG----FIEHIPEIFICAGWRKGS  683 (697)
Q Consensus       608 C~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~----~~~~i~~~~ICAG~~~g~  683 (697)
                                                     .....|+.+.+.+++.+.|...+....    ....+.+.++|++. ..+
T Consensus       153 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  200 (259)
T d1elva1         153 -------------------------------DRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGG-EKG  200 (259)
T ss_dssp             -------------------------------SSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEEEEEC-STT
T ss_pred             -------------------------------ccccccccceeeEechhhceeeeecccccccccceeecceeeccC-CCC
Confidence                                           124578999999999999987653211    11246788899986 456


Q ss_pred             CCCCcccCCCCC
Q psy12777        684 FDSCEEHARDGT  695 (697)
Q Consensus       684 ~dtCqGDSGgg~  695 (697)
                      .+.|+||+||++
T Consensus       201 ~~~c~gDsGgPl  212 (259)
T d1elva1         201 MDSCKGDSGGAF  212 (259)
T ss_dssp             CBCCTTCTTCEE
T ss_pred             CccCCCCcCCeE
Confidence            799999999986

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=4.3e-30  Score=248.98  Aligned_cols=189  Identities=32%  Similarity=0.589  Sum_probs=154.1

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++++.++|||+|.|.++......++|+|+||+++||||||||+....  ...|.++.........  ..+.+.|.+
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~--~~~v~~~~~~~~~~~~--~~~~~~v~~   76 (241)
T d1brup_           1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSR--TYRVVLGRHSLSTNEP--GSLAVKVSK   76 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTTS--CEEEEESCSBSSSCCT--TCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEcCCCcceEEeEEEEEeCCEEEECeEeeeccc--ccceeeeccceeccCC--Cccccceee
Confidence            789999999999999999876544456789999999999999999997643  4556666555544333  468899999


Q ss_pred             EEECCCCCCCC--CCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQFDPRT--FEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Yn~~t--~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +++|+.|+...  .++|||||+|+.++.++..++||||+...... .+..+.+.|||....+                  
T Consensus        77 ~~~~~~~~~~~~~~d~~iall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~g~~~~~------------------  138 (241)
T d1brup_          77 LVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTN------------------  138 (241)
T ss_dssp             EEECTTCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTT------------------
T ss_pred             eEEEeeeeeccccCCceEEEEecccccccccceeeeeeccccccCCCceeEEEEeeeccCCC------------------
Confidence            99999998655  45779999999999999999999999876544 5889999999998762                  


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       139 --------------------------------------------------------------------------------  138 (241)
T d1brup_         139 --------------------------------------------------------------------------------  138 (241)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                ...+..|+++.+.++++++|++.+..   ...+..+++|++. .+..++|+|||||++
T Consensus       139 ----------~~~~~~~~~~~~~~~~~~~C~~~~~~---~~~~~~~~~~~~~-~~~~~~C~gdsGgPl  192 (241)
T d1brup_         139 ----------GASPDILQQGQLLVVDYATCSKPGWW---GSTVKTNMICAGG-DGIISSCNGDSGGPL  192 (241)
T ss_dssp             ----------SCCCSBCEEEEEEEECHHHHTSTTTT---GGGCCTTEEEECC-SSSSBCCTTCTTCEE
T ss_pred             ----------CcCCCcceEEEEEEeCHHHhCccccc---cccccccceeecC-CCCccccCCCcccce
Confidence                      23457899999999999999976532   2357788888884 667899999999986

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.97  E-value=2.5e-30  Score=251.33  Aligned_cols=180  Identities=29%  Similarity=0.580  Sum_probs=146.9

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+.|..++|||+|+|+.      .++|+|+||+++||||||||+.+    ...+.++.........  ......+.+
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~------~~~C~GtLIs~~~VLTaAhCv~~----~~~~~~~~~~~~~~~~--~~~~~~~~~   68 (235)
T d1tona_           1 IVGGYKCEKNSQPWQVAVIN------EYLCGGVLIDPSWVITAAHCYSN----NYQVLLGRNNLFKDEP--FAQRRLVRQ   68 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEES------SSEEEEEEEETTEEEECGGGCCS----CCEEEESCSBTTSCCT--TCEEECEEE
T ss_pred             CCCCEECCCCCCCeEEEEcC------CeEEEEEEecCCEEEECceecCC----CCceEEeeeeeecCCC--ceeEeeeee
Confidence            78999999999999999963      47899999999999999999975    2455665555443322  346677888


Q ss_pred             EEECCCCCC-----------CCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCc
Q psy12777        471 VASHPQFDP-----------RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPA  539 (697)
Q Consensus       471 IiiHP~Yn~-----------~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~  539 (697)
                      +..|++|..           ....+|||||+|++++.|+++++|+||+..... ....+.++|||.+...          
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~Diall~L~~~v~~~~~i~~i~l~~~~~~-~~~~~~~~g~g~~~~~----------  137 (235)
T d1tona_          69 SFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEPK-VGSTCLASGWGSTNPS----------  137 (235)
T ss_dssp             EEECTTCCCC--------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEEESSCSSSS----------
T ss_pred             eeeeeeceeeeeeecccccccccccceeEEEecCccccCCccccccccccccc-ccceeEEEEccccccc----------
Confidence            888888743           345689999999999999999999999987654 5788999999998662          


Q ss_pred             ccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeee
Q psy12777        540 TRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI  619 (697)
Q Consensus       540 ~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~  619 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (235)
T d1tona_         138 --------------------------------------------------------------------------------  137 (235)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        620 IQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       620 ~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                       .......|+++.++++++++|+..+.     ....+.++|++...++.+.|.||+||++
T Consensus       138 -----------------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~c~~~~~~~~~~c~gdsG~Pl  191 (235)
T d1tona_         138 -----------------EMVVSHDLQCVNIHLLSNEKCIETYK-----DNVTDVMLCAGEMEGGKDTCAGDSGGPL  191 (235)
T ss_dssp             -----------------SCCCCSBCEEEEEEEECGGGCGGGGS-----TTGGGGEEEEECTTCSCBCCTTCTTCEE
T ss_pred             -----------------cccccccceeeeeeeeCHHHHHHHhC-----CCCCCCceEeCcCCCCccccCCCcCCeE
Confidence                             23345689999999999999998875     2467889999987888899999999986

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.8e-30  Score=246.54  Aligned_cols=131  Identities=29%  Similarity=0.505  Sum_probs=115.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|++    .+.++|+|+||+++||||||||+.+.....+.+.++..+......   ...+.+..
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~----~~~~~C~G~LIs~~~VLTaAhC~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~   73 (218)
T d2z7fe1           1 IVGGRRARPHAWPFMVSLQL----RGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREP---TRQVFAVQ   73 (218)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCT---TCEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCeEEEEEEEeCCEEEECeEecccccccceeeeeeecccccccc---ceeeeeee
Confidence            78999999999999999986    357899999999999999999999877778889998877765443   46677888


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCC
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYE  528 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~  528 (697)
                      ++.|+.|+.....+|||||+|++++.++++++|||||..+..+ ....+.++|||....
T Consensus        74 ~~~~~~~~~~~~~~diall~l~~~~~~~~~~~pi~l~~~~~~~~~~~~~~~~g~~~~~~  132 (218)
T d2z7fe1          74 RIFENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGR  132 (218)
T ss_dssp             EEEESCCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSS
T ss_pred             eEeeeccccccccceEEEeeccccceeeeeeeeeeeccCccccCCCcEEEEeccceeec
Confidence            9999999999999999999999999999999999999876654 578899999998866

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.9e-30  Score=248.94  Aligned_cols=185  Identities=30%  Similarity=0.589  Sum_probs=149.8

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|+..   +..++|+|+||+++||||||||+.+...  ..+............  ..+.+.+.+
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~---~~~~~C~GtlIs~~~VLTaAhCv~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~   73 (233)
T d2p3ub1           1 IVGGQECKDGECPWQALLINE---ENEGFCGGTILSEFYILTAAHCLYQAKR--FKVRVGDRNTEQEEG--GEAVHEVEV   73 (233)
T ss_dssp             CBSSEECCTTSCTTEEEEECT---TSCEEEEEEECSSSEEEECGGGGGSCSS--CEEEESCSBTTSCCS--CCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEec---CCCeEEEEEEEeCCEEEECceecccccc--cccccccccccccCC--Cceeeccee
Confidence            799999999999999999752   3467899999999999999999986433  344433333322222  457889999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC----CCCCCEEEEEeccccCCCCccccCCCCcccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT----NFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMAT  546 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~----~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~  546 (697)
                      +++|++|+....++|||||+|++|+.|+++++|+|||....    ......+.+.|||....                  
T Consensus        74 i~~h~~~~~~~~~~diAll~L~~pv~~~~~v~pi~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------------  135 (233)
T d2p3ub1          74 VIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHE------------------  135 (233)
T ss_dssp             EEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSST------------------
T ss_pred             EEEeecccccccccceeeeecccceeecccccccccCCcccccccccccceEEEecCCcccc------------------
Confidence            99999999999999999999999999999999999997633    22467788999988765                  


Q ss_pred             cccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccc
Q psy12777        547 CWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRR  626 (697)
Q Consensus       547 C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~  626 (697)
                                                                                                      
T Consensus       136 --------------------------------------------------------------------------------  135 (233)
T d2p3ub1         136 --------------------------------------------------------------------------------  135 (233)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        627 ESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       627 ~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                .+.....+++..+.+++.+.|...+.     ..+..+++|+....+..+.|.|||||++
T Consensus       136 ----------~~~~~~~~~~~~~~~~~~~~C~~~~~-----~~~~~~~~~~~~~~~~~~~~~gdsGgpl  189 (233)
T d2p3ub1         136 ----------KGRQSTRLKMLEVPYVDRNSCKLSSS-----FIITQNMFCAGYDTKQEDACQGDSGGPH  189 (233)
T ss_dssp             ----------TSCBCSBCEEEEEEBCCHHHHHHHCS-----SCCCTTEEEESCSSSSCBCCTTTTTCEE
T ss_pred             ----------CCCccccccccccccccchhhhcccC-----ceEeecceeeecccccCCCcCCCccccc
Confidence                      23345678999999999999998774     2467889999877788899999999986

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5e-30  Score=246.90  Aligned_cols=134  Identities=28%  Similarity=0.490  Sum_probs=117.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|++.. ..+.++|+|+||+++||||||||+.......+.|++|.........   .+.+.+.+
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~-~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~v~~g~~~~~~~~~---~~~~~~~~   76 (221)
T d1fuja_           1 IVGGHEAQPHSRPYMASLQMRG-NPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEP---TQQHFSVA   76 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEETT-BTTCCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCT---TCEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEec-CCCCEEEEEEEEeCCEEEEeeEEEeecCCccceeeeeccccccccc---cceeeeee
Confidence            7899999999999999998633 3346889999999999999999999877778899999877655443   47788999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCC
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYE  528 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~  528 (697)
                      ++.||.|+.....+|||||+|++++.++++++|||||...... .+..+.++||+....
T Consensus        77 ~~~~~~~~~~~~~~diAll~L~~~~~~~~~v~picl~~~~~~~~~~~~~~~~G~~~~~~  135 (221)
T d1fuja_          77 QVFLNNYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGA  135 (221)
T ss_dssp             EEEECCCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCS
T ss_pred             eEEEeeecCCCCccEEEEEEccccccccceEEEEEecccccccCCCceEEEeccccccc
Confidence            9999999999999999999999999999999999999876544 588999999998765

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=99.97  E-value=3.9e-30  Score=250.12  Aligned_cols=181  Identities=28%  Similarity=0.452  Sum_probs=149.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|++....+..++|+|+||+++||||||||+..  ...+.+++|..+...     ..+.+.|++
T Consensus         1 i~~G~~a~~ge~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhC~~~--~~~~~v~~~~~~~~~-----~~~~~~v~~   73 (230)
T d2hlca_           1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD--AVSVVVYLGSAVQYE-----GEAVVNSER   73 (230)
T ss_dssp             CBTCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTT--EEEEEEEESCSBTTC-----CSEEEECSE
T ss_pred             CCCCEECCCCCCCCEEEEEEEecCCCeeEEEEEEEeCCEEEEeeecccc--cccceeecccceecc-----cccceeeEe
Confidence            7999999999999999998866666788999999999999999999975  445778888766533     358899999


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC---CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF---VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~---~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +++||+|+.....+|||||+|+++ .+.++++||||+......   .+..+.+.|||....                   
T Consensus        74 i~~hp~y~~~~~~~DiALl~L~~~-~~~~~v~pi~l~~~~~~~~~~~~~~~~~~g~~~~~~-------------------  133 (230)
T d2hlca_          74 IISHSMFNPDTYLNDVALIKIPHV-EYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNT-------------------  133 (230)
T ss_dssp             EEECTTCBTTTTBTCCEEEECSCC-CCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSS-------------------
T ss_pred             EEeeecccccccccceeEEEeecc-cccccceeEEeeccccccccccceeEEEEeeccccc-------------------
Confidence            999999999999999999999876 588899999998764332   477889999987544                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       134 --------------------------------------------------------------------------------  133 (230)
T d2hlca_         134 --------------------------------------------------------------------------------  133 (230)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                  ....|+.+.+.+++.+.|...+..    ....+.++|+.. ..+.+.|+|||||++
T Consensus       134 ------------~~~~~~~~~~~~~~~~~c~~~~~~----~~~~~~~~~~~~-~~~~~~~~gdsGgp~  184 (230)
T d2hlca_         134 ------------DTVILQYTYNLVIDNDRCAQEYPP----GIIVESTICGDT-SDGKSPCFGDSGGPF  184 (230)
T ss_dssp             ------------CCCBCEEEEEEEECHHHHHTTSCT----TSSCTTEEEECC-TTSCBCCTTCTTCEE
T ss_pred             ------------cchhhheeeeccccchhhhhcccc----ccccccceEecc-ccCccccccccCCCe
Confidence                        135789999999999999976632    245677888874 566899999999986

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=6.5e-30  Score=247.58  Aligned_cols=191  Identities=28%  Similarity=0.514  Sum_probs=150.5

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|++.......++|+|+||+++||||||||+.+.  ....|++|.................+..
T Consensus         1 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~--~~~~v~~g~~~~~~~~~~~~~~~~~~~~   78 (240)
T d1gvkb_           1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRE--LTFRVVVGEHNLNQNNGTEQYVGVQKIV   78 (240)
T ss_dssp             CBTCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCSC--CCEEEEESCSBTTSCCSCCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCEEEEEEEecCCccceEEEEEEEeCCEEEECccccccc--CCceEEeeeeecccccccccccccccee
Confidence            78999999999999999987665555678999999999999999999863  3467888888876655432222233333


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      ++.|+.|+.....+|||||+|.+++.+.+.++|+||+...... .+....+.||+.....                    
T Consensus        79 ~~~~~~~~~~~~~~diAll~l~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~--------------------  138 (240)
T d1gvkb_          79 VHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTN--------------------  138 (240)
T ss_dssp             ECTTCCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTT--------------------
T ss_pred             EEEeecccccccCcceeeecccCcccccccccceeeccCccccccccceeEecccccccc--------------------
Confidence            4445555667788999999999999999999999999876544 4677888999887662                    


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       139 --------------------------------------------------------------------------------  138 (240)
T d1gvkb_         139 --------------------------------------------------------------------------------  138 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              ......|+...+++++.+.|...+..   .....+.++|++. .+..+.|+|||||++
T Consensus       139 --------~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~c~~~-~~~~~~c~gDsG~pl  192 (240)
T d1gvkb_         139 --------GQLAQTLQQAYLPTVDYAICSSSSYW---GSTVKNSMVCAGG-DGVRSGCQGDSGGPL  192 (240)
T ss_dssp             --------CCBCSBCEEEECCEECHHHHTSTTTT---GGGCCTTEEEECC-SSSCBCCTTCTTCEE
T ss_pred             --------ccccceeeEEEEEEEcHHHhcceecc---CCccCCceEEecC-CCCCccccCccccce
Confidence                    23356899999999999999887642   3467889999985 556789999999986

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=99.96  E-value=2.7e-29  Score=244.75  Aligned_cols=184  Identities=21%  Similarity=0.459  Sum_probs=145.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||++|..++|||+|+|+.    ...++|+|+||+++||||||||+.+.    ..+.++.......... ......+..
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~----~~~~~C~G~LIs~~~VLTaAhCv~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~   71 (234)
T d1op0a_           1 VIGGNECDINEHRFLVAFFN----TTGFFCGGTLINPEWVVTAAHCDSTD----FQMQLGVHSKKVLNED-EQTRNPKEK   71 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCSS----CEEEESCSCSSSCCTT-CEEECEEEE
T ss_pred             CCCCEECCCCCcCcEEEEEE----CCcEEEEEEEEcCCEEEECceeCCCC----CccccceeeccccCCc-ceeeeeeee
Confidence            79999999999999999986    34689999999999999999999753    2333333333322221 233444567


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccccc
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNH  550 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~  550 (697)
                      .+.|+.|+.....+|||||||++++.|+++|+|||||..... .+..+.++|||.....                     
T Consensus        72 ~~~~~~~~~~~~~~DiaLl~L~~~v~~~~~i~picl~~~~~~-~~~~~~~~g~~~~~~~---------------------  129 (234)
T d1op0a_          72 FICPNKNNNEVLDKDIMLIKLDKPISNSKHIAPLSLPSSPPS-VGSVCRIMGWGSITPV---------------------  129 (234)
T ss_dssp             EECTTCCTTCTTSSCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSS---------------------
T ss_pred             ccccccccccccchhhhhhhcCCceeccceeecccccccCcc-cceEEEEeeecccccc---------------------
Confidence            788899999999999999999999999999999999987543 6899999999887652                     


Q ss_pred             cCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccccc
Q psy12777        551 FLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNL  630 (697)
Q Consensus       551 ~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~  630 (697)
                                                                                                      
T Consensus       130 --------------------------------------------------------------------------------  129 (234)
T d1op0a_         130 --------------------------------------------------------------------------------  129 (234)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        631 WKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       631 Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                            .......|+.+.+.++++++|...+...    .....++|.....+..+.|.||+||++
T Consensus       130 ------~~~~~~~~~~~~~~~~~~~~C~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~G~Pl  184 (234)
T d1op0a_         130 ------KETFPDVPYCANINLLDHAVCQAGYPEL----LAEYRTLCAGIVQGGKDTCGGDSGGPL  184 (234)
T ss_dssp             ------SCCCCSSCEEEEEEEECHHHHHHHCTTC----CTTSCEEEEECTTCCCBCCTTCTTCEE
T ss_pred             ------ccccccccccccceEechHHhcccccCc----ceeeeeeeecccccccccccCCCCceE
Confidence                  2334567999999999999999877421    344566777767788899999999986

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.9e-30  Score=246.73  Aligned_cols=184  Identities=33%  Similarity=0.649  Sum_probs=148.2

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+++..++|||+|+|..    ...++|+|+||+++||||||||+......  .++...........  ....+.+.+
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~----~~~~~C~GtLI~~~~VLTaAhCv~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~   72 (235)
T d1rfna_           1 VVGGEDAKPGQFPWQVVLNG----KVDAFCGGSIVNEKWIVTAAHCVETGVKI--TVVAGEHNIEETEH--TEQKRNVIR   72 (235)
T ss_dssp             CBTCEECCTTSSTTEEEEES----SSTTCEEEEEEETTEEEECGGGCCTTCCC--EEEESCSBSSSCCS--CCEEEEEEE
T ss_pred             CCCCEECCCCCcCCEEEEec----CCCEEEEEEEeeCCEEEEChhhcCCCCce--EEEEeecccccCCC--CcceeeeeE
Confidence            79999999999999999964    34578999999999999999999875433  34444333333222  457788999


Q ss_pred             EEECCCCCCC--CCCCceEEEecCcccccCCCeeeeecCCCCCC---CCCCEEEEEeccccCCCCccccCCCCccccccc
Q psy12777        471 VASHPQFDPR--TFEYDLALLRFYEPVKFQPNIIPICVPEDDTN---FVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMA  545 (697)
Q Consensus       471 IiiHP~Yn~~--t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~---~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~  545 (697)
                      +++||+|+..  ...+|||||||++++.++..++|+|||.....   ..+..+.+.|||....                 
T Consensus        73 ~~~~~~~~~~~~~~~~diAllkL~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~g~~~~~~-----------------  135 (235)
T d1rfna_          73 IIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFH-----------------  135 (235)
T ss_dssp             EEECTTCBTTTBSSTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHTTSEEEEEESCBSST-----------------
T ss_pred             EeeccCCCCCcCccCceEEEEEeCCCccCCCccceeeeccccccccccccceEEEeccccccc-----------------
Confidence            9999999854  46799999999999999999999999975432   2577899999998765                 


Q ss_pred             ccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccc
Q psy12777        546 TCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRR  625 (697)
Q Consensus       546 ~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~  625 (697)
                                                                                                      
T Consensus       136 --------------------------------------------------------------------------------  135 (235)
T d1rfna_         136 --------------------------------------------------------------------------------  135 (235)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        626 RESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       626 ~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                 .......|+++.+++++.+.|+..+.     ..+.+..+|++...+..+.|+|||||++
T Consensus       136 -----------~~~~~~~l~~~~~~~~~~~~c~~~~~-----~~~~~~~~~~~~~~~~~~~~~gdsGgpl  189 (235)
T d1rfna_         136 -----------KGRSALVLQYLRVPLVDRATCLRSTK-----FTIYNNMFCAGFHEGGRDSCQGDSGGPH  189 (235)
T ss_dssp             -----------TSCBCSBCEEEEEEBCCHHHHHHHCS-----SCCCTTEEEESCSSCSCBCCTTCTTCEE
T ss_pred             -----------cccccCcceEEEEecccccccccccC-----ceecCCeeEeecCCCCccccCCCCCcee
Confidence                       23345789999999999999998764     2466788888888888999999999986

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-29  Score=247.55  Aligned_cols=195  Identities=28%  Similarity=0.490  Sum_probs=145.7

Q ss_pred             ccCCCcCC----CCCCeeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccC
Q psy12777        379 EVCGRRLF----PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDL  454 (697)
Q Consensus       379 ~~CG~~~~----~~~RIVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl  454 (697)
                      ..||++..    ...||+||+.|..++|||+|+|+.+   +..++|+|+||+++||||||||+.........+..+....
T Consensus         2 ~~cg~~~~~~~~~~~ri~gG~~a~~~~~Pw~v~i~~~---~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~   78 (247)
T d1rjxb_           2 FDCGKPQVEPKKCPGAVVGGCVAYPHSWPWQVSLRTR---FGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQ   78 (247)
T ss_dssp             CSTTCCSSCCCCCCTTSTTCEECCTTSSTTEEEEEET---TCCEEEEEEEEETTEEEEEGGGGTTCSCGGGEEEEESCCB
T ss_pred             CCCCCCCcCCCCCCCeEECCEECCCCCCCcEEEEEEC---CCCEEEEEEEEeCCEEEeeeEEEEeccCCccceeeccccc
Confidence            46998543    2569999999999999999999752   3468999999999999999999986544444443333332


Q ss_pred             CCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccc
Q psy12777        455 STEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRR  533 (697)
Q Consensus       455 ~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~  533 (697)
                      ......       ..+.+.|+.|+.....+|||||+|+.++.+++.++|+||+...... .+..+...|||....     
T Consensus        79 ~~~~~~-------~~~~~~~~~~~~~~~~~DiAl~~L~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~-----  146 (247)
T d1rjxb_          79 EVNLEP-------HVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQG-----  146 (247)
T ss_dssp             SSSCCT-------TCEEEEEEEEEECSSSCCEEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCC--------
T ss_pred             cccccc-------eeeEEeeccccCCCccchhhhhhhhcccccccccccccccccccccCCCceeeecccccccC-----
Confidence            221111       1233445555555667999999999999999999999998765433 467788889987654     


Q ss_pred             cCCCCcccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccc
Q psy12777        534 SYGHPATRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW  613 (697)
Q Consensus       534 s~~~p~~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~  613 (697)
                                                                                                      
T Consensus       147 --------------------------------------------------------------------------------  146 (247)
T d1rjxb_         147 --------------------------------------------------------------------------------  146 (247)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cceeeeeecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCC
Q psy12777        614 SQIIPIIQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARD  693 (697)
Q Consensus       614 ~~~i~~~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGg  693 (697)
                                              ......|+.+.+.+++.+.|...+..   .....+.++|++...+..+.|.|||||
T Consensus       147 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~c~~~~~~~~~~c~gdsG~  199 (247)
T d1rjxb_         147 ------------------------TFGAGLLMEAQLPVIENKVCNRYEFL---NGRVQSTELCAGHLAGGTDSCQGDSGG  199 (247)
T ss_dssp             -------------------------CCCSBCEEEEEEEECHHHHTSTTTT---TTCSCTTEEEESCSSSCCCBCCSCTTC
T ss_pred             ------------------------CCCCCcceEEEEEEEchHHhhhhhcc---CcccccceeEEeccCCCcccccCCccc
Confidence                                    23357899999999999999877642   235778999999888888999999999


Q ss_pred             CC
Q psy12777        694 GT  695 (697)
Q Consensus       694 g~  695 (697)
                      ++
T Consensus       200 pl  201 (247)
T d1rjxb_         200 PL  201 (247)
T ss_dssp             EE
T ss_pred             eE
Confidence            86

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=99.96  E-value=3.3e-29  Score=242.44  Aligned_cols=188  Identities=30%  Similarity=0.589  Sum_probs=151.3

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+.|+.++|||+|+|++.......++|+|+||+++||||||||+.+.  ....+.+|.........  ......+..
T Consensus         1 iigG~~~~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~--~~~~v~~~~~~~~~~~~--~~~~~~~~~   76 (236)
T d1elta_           1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSA--RTWRVVLGEHNLNTNEG--KEQIMTVNS   76 (236)
T ss_dssp             CBSSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSSC--CCEEEEESCSBTTSCCS--CCEEECEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEccCCcceeEEEEEEEeCCEEEECeeecccc--ccceeeccceeeecccC--CceeeeeeE
Confidence            78999999999999999987665555678999999999999999999763  44667887766655443  356777888


Q ss_pred             EEECCCCCCCC--CCCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCccccccccc
Q psy12777        471 VASHPQFDPRT--FEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATC  547 (697)
Q Consensus       471 IiiHP~Yn~~t--~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C  547 (697)
                      +.+|+.|+...  ..+|||||+|++++.++..++|||||...... ....+.+.|||....                   
T Consensus        77 ~~~~~~~~~~~~~~~~diall~l~~~~~~~~~~~picL~~~~~~~~~~~~~~~~g~g~~~~-------------------  137 (236)
T d1elta_          77 VFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTST-------------------  137 (236)
T ss_dssp             EEECTTCCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSST-------------------
T ss_pred             EEEeeeecccccccCceEEEeeccCcceeecccceeecCchhcccCCCceEEEeccccccc-------------------
Confidence            88899987655  46799999999999999999999999876544 467899999999866                   


Q ss_pred             ccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccc
Q psy12777        548 WNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRE  627 (697)
Q Consensus       548 ~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~  627 (697)
                                                                                                      
T Consensus       138 --------------------------------------------------------------------------------  137 (236)
T d1elta_         138 --------------------------------------------------------------------------------  137 (236)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        628 SNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       628 ~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                               .......|+++.+.++++++|...+..   ...+...++|++  ....+.|.||+||++
T Consensus       138 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~c~gdsGgpl  191 (236)
T d1elta_         138 ---------GGPLSDSLKQAWLPSVDHATCSSSGWW---GSTVKTTMVCAG--GGANSGCNGDSGGPL  191 (236)
T ss_dssp             ---------TCCCCSBCEEEECCEECHHHHTSTTTT---GGGSCTTEEEEC--CSSCBCCTTCTTCEE
T ss_pred             ---------CcccCccceeeeeEEEcHHHhhhhccc---ccccceeeeecC--Cccccccccccccce
Confidence                     233456799999999999999876532   234566777776  345789999999986

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.4e-29  Score=245.54  Aligned_cols=132  Identities=38%  Similarity=0.688  Sum_probs=112.6

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC-CCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~-~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||+.|..++|||+|+|++    +..++|+|+||+++||||||||+.+.. ...+.+.++..++.....  ......+.
T Consensus         1 iigG~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTAAhCv~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~   74 (254)
T d2bz6h1           1 IVGGKVCPKGECPWQVLLLV----NGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDG--DEQSRRVA   74 (254)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCS--CCEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEeCCCEEEECcccccCCCCcccceeeccceeeccccc--cceeeeee
Confidence            78999999999999999986    346889999999999999999998744 445677788777765444  46778899


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCC----CCCCCEEEEEeccccCC
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDT----NFVGTSAHVTGWGRLYE  528 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~----~~~G~~c~VtGWG~t~~  528 (697)
                      .++.|+.|+.....+|||||||++|+.++++|+|+|||....    ...+..+++.|||....
T Consensus        75 ~~~~~~~~~~~~~~~DiAll~L~~~v~~~~~i~picl~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (254)
T d2bz6h1          75 QVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLD  137 (254)
T ss_dssp             EEEEETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSST
T ss_pred             eeeecccccccccccceeEEEecCcccccceEeeeecCccccccccccCCceEEEeccCccCC
Confidence            999999999999999999999999999999999999997532    12477899999999876

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.96  E-value=3.2e-29  Score=243.23  Aligned_cols=182  Identities=29%  Similarity=0.521  Sum_probs=146.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI  470 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~  470 (697)
                      |+||+++..++|||+|+|++    +..++|+|+||+++||||||||+.+.    ...+.....+.....  ..+...+..
T Consensus         1 i~gG~~~~~~e~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~----~~~~~~~~~~~~~~~--~~~~~~~~~   70 (237)
T d1gvza_           1 IIGGWECEKHSKPWQVAVYH----QGHFQCGGVLVHPQWVLTAAHCMSDD----YQIWLGRHNLSKDED--TAQFHQVSD   70 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCSS----CEEEESCSBTTSCCT--TCEEECEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCeEEEEEEEEeCCEEEeChhhccCC----CceeEeeeeeccccC--cceeeeeee
Confidence            78999999999999999986    35789999999999999999999752    233444444433332  357788899


Q ss_pred             EEECCCCCC-----------CCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCc
Q psy12777        471 VASHPQFDP-----------RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPA  539 (697)
Q Consensus       471 IiiHP~Yn~-----------~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~  539 (697)
                      .+.|+.|+.           ..+.+|||||||++|+.|+++++|+|||..... .+..+++.|||.....          
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~Diali~L~~pv~~~~~v~p~~l~~~~~~-~~~~~~~~g~g~~~~~----------  139 (237)
T d1gvza_          71 SFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPK-LGSTCYTSGWGLISTF----------  139 (237)
T ss_dssp             EEECTTSCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEEEECSCTT----------
T ss_pred             EEeeeeeeeeeeecccccCccccccceEEEEECCceecccccccccccccccc-cceeEEEEeeeeeccc----------
Confidence            999988853           224689999999999999999999999976554 5889999999987652          


Q ss_pred             ccccccccccccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeee
Q psy12777        540 TRQEMATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPI  619 (697)
Q Consensus       540 ~~~~s~~C~~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~  619 (697)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (237)
T d1gvza_         140 --------------------------------------------------------------------------------  139 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eecccccccccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        620 IQNCRRRESNLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       620 ~~~~~~~~~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                       ....+..||++.+++++.+.|+..+.     ..+.+.++|+....++.+.|+||+||++
T Consensus       140 -----------------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~~~~~~~~~~~~~~gdsG~pl  193 (237)
T d1gvza_         140 -----------------TNRGSGTLQCVELRLQSNEKCARAYP-----EKMTEFVLCATHRDDSGSICLGDSGGAL  193 (237)
T ss_dssp             -----------------TCSEEEEEEEEEEEEECGGGGCSSCG-----GGCCTTEEEEECSSTTCEECGGGTTCEE
T ss_pred             -----------------cccccceeeEEEEEeecHHHHHhhcc-----cccccccccceecccccccccCCCCCcE
Confidence                             22335679999999999999998764     2456788888877788899999999986

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=2.4e-29  Score=244.83  Aligned_cols=181  Identities=25%  Similarity=0.508  Sum_probs=144.5

Q ss_pred             CcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCC
Q psy12777        401 KWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR  480 (697)
Q Consensus       401 ewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~  480 (697)
                      .|||||+|+++......|+|+|+||+++||||||||+.+.  ....|++|.............+...|.++++||+|+..
T Consensus         1 ~~PW~v~l~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~hp~~~~~   78 (232)
T d1fona_           1 SWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTS--RTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSN   78 (232)
T ss_dssp             CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCTT--SCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTT
T ss_pred             CCccEEEEEEeCCCceEEEEEEEEecCCEEEEChhhccCC--CceEEEEEeccccccccccccccceeEEEEEccCcccc
Confidence            4999999998765556789999999999999999999864  45667777665543222213445668899999999875


Q ss_pred             CC--CCceEEEecCcccccCCCeeeeecCCCCCCC-CCCEEEEEeccccCCCCccccCCCCcccccccccccccCCCccc
Q psy12777        481 TF--EYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRIL  557 (697)
Q Consensus       481 t~--~nDIALLrL~~PV~fs~~V~PICLP~~~~~~-~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~~~~~~~~~  557 (697)
                      ..  ++|||||+|++++.++++++||||+...... .+..+++.||+....                             
T Consensus        79 ~~~~~~diAll~l~~~~~~~~~~~pic~~~~~~~~~~~~~~~~~g~~~~~~-----------------------------  129 (232)
T d1fona_          79 CVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYT-----------------------------  129 (232)
T ss_dssp             CGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCC-----------------------------
T ss_pred             ccccccceeeeecccceEEeecceeeecCcccccCCCCceeEeeccccccC-----------------------------
Confidence            54  5999999999999999999999999776544 477899999998866                             


Q ss_pred             CCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccccccccccC
Q psy12777        558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESNLWKMALAD  637 (697)
Q Consensus       558 ~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~~Wg~~~~~  637 (697)
                                                                                                     .
T Consensus       130 -------------------------------------------------------------------------------~  130 (232)
T d1fona_         130 -------------------------------------------------------------------------------G  130 (232)
T ss_dssp             -------------------------------------------------------------------------------S
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           2


Q ss_pred             CCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       638 ~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                      +..+..|+.+.+++++.+.|.+.+..   ...+.+.++|++  ..+.+.|.||||||+-
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~c~~--~~~~~~~~gdsGgpl~  184 (232)
T d1fona_         131 GPLPDKLQQALLPTVDYEHCSQWDWW---GITVKKTMVCAG--GDTRSGCNGDSGGPLN  184 (232)
T ss_dssp             SSCCSBCEEEECCEECHHHHTSTTTT---GGGCCTTEEEEC--CSSSCSTTSCTTCEEE
T ss_pred             CCCCCcceEEEEEEEcHHHhhhhhcc---Cceeeeceeeec--cccccccccCCCCceE
Confidence            34567899999999999999987642   346788999998  4557899999999863

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.2e-29  Score=255.98  Aligned_cols=106  Identities=25%  Similarity=0.555  Sum_probs=86.4

Q ss_pred             eeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCCCCCCCCcEEEEEEEEEE
Q psy12777        395 EKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLSTEEEPYGYQERRVQIVAS  473 (697)
Q Consensus       395 ~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~Iii  473 (697)
                      ..+..++|||+|+|++.....+.++|+|+||+++||||||||+... ....+.|++|...          +.+.|+++++
T Consensus         9 ~~t~~~e~PW~v~i~~~~~~~~~~~C~GtLIs~~~VLTAAhCv~~~~~~~~~~v~~g~~~----------~~~~v~~i~~   78 (287)
T d1rrka1           9 KGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK----------RDLEIEVVLF   78 (287)
T ss_dssp             TCCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEETTCS----------SCEEEEEEEE
T ss_pred             CCCCcCCCCCEEEEEEEECCCCcEEEEEEEecCCEEEEChhheecCCCcceEEEEeCCee----------ceeeeEEEEe
Confidence            3566789999999987554456789999999999999999999643 3446788888542          3467999999


Q ss_pred             CCCCCC---------CCCCCceEEEecCcccccCCCeeeeecCCCC
Q psy12777        474 HPQFDP---------RTFEYDLALLRFYEPVKFQPNIIPICVPEDD  510 (697)
Q Consensus       474 HP~Yn~---------~t~~nDIALLrL~~PV~fs~~V~PICLP~~~  510 (697)
                      ||+|+.         ..++||||||||++++.|+++|+|||||...
T Consensus        79 Hp~y~~~~~~~~~~~~~~~~DIALl~L~~~~~~s~~v~PIcLp~~~  124 (287)
T d1rrka1          79 HPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTE  124 (287)
T ss_dssp             CTTCCTTTTGGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBH
T ss_pred             cCCccccccccccCCCcccccEEEEecccCccccceEEEEecCCcc
Confidence            999974         3456999999999999999999999999753

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=99.95  E-value=8.1e-28  Score=234.26  Aligned_cols=175  Identities=25%  Similarity=0.471  Sum_probs=133.7

Q ss_pred             eeCCeeCCCCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCC-CCCceEEEEccccCCCCCCCCCcEEEEEE
Q psy12777        391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRLGEHDLSTEEEPYGYQERRVQ  469 (697)
Q Consensus       391 IVGG~~A~~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~-~~~~l~V~LG~~dl~~~~~~~~~q~~~V~  469 (697)
                      |+||+.|..++|||+|+|.        ++|+|+||+++||||||||+.+. ....+.|++|..++....      .+.|.
T Consensus         1 ~~gG~~~~~~~~Pw~v~l~--------~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~v~~g~~~~~~~~------~~~i~   66 (223)
T d1os8a_           1 VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSS------AVKVR   66 (223)
T ss_dssp             CBSCEECCTTSSTTEEEET--------TTEEEEEEETTEEEECGGGSSCSEECCCCEEEESCSBTTCTT------CEEEE
T ss_pred             CCCCEECCCCCCCcEEEEe--------ccEeEEEEeCCEEEEChhhccCCCCcceeeeccccccccccc------cccce
Confidence            7899999999999999983        46999999999999999999764 345678889988764422      23445


Q ss_pred             EEEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCccccccccccc
Q psy12777        470 IVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWN  549 (697)
Q Consensus       470 ~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~~  549 (697)
                      .+.+|+.|+....+||||||||++++.+.     +|++.......+..+.+.||+....                     
T Consensus        67 ~~~i~~~~~~~~~~~DIAllkL~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~---------------------  120 (223)
T d1os8a_          67 STKVLQAPGYNGTGKDWALIKLAQPINQP-----TLKIATTTAYNQGTFTVAGWGANRE---------------------  120 (223)
T ss_dssp             EEEEEECTTCSSSSCCCEEEEESSCCCSC-----CCEECCSSTTSSSEEEEEESSCSST---------------------
T ss_pred             eeeeeecccccccceeeeeeeeeeeeecc-----cccccccccccccceEEeecccccc---------------------
Confidence            55666667667788999999999988764     4444433333588999999988765                     


Q ss_pred             ccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeecccccccc
Q psy12777        550 HFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRESN  629 (697)
Q Consensus       550 ~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~~  629 (697)
                                                                                                      
T Consensus       121 --------------------------------------------------------------------------------  120 (223)
T d1os8a_         121 --------------------------------------------------------------------------------  120 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEee-CCCCCCCCcccCCCCCC
Q psy12777        630 LWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGW-RKGSFDSCEEHARDGTD  696 (697)
Q Consensus       630 ~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~-~~g~~dtCqGDSGgg~~  696 (697)
                             ....+..|+...+++++.++|+..+...    .....++|++. ..++.+.|.+|+|+++.
T Consensus       121 -------~~~~~~~~~~~~~~~~~~~~C~~~~~~~----~~~~~~~~~~~~~~~~~~~c~~~~G~pl~  177 (223)
T d1os8a_         121 -------GGSQQRYLLKANVPFVSDAACRSAYGNE----LVANEEICAGYPDTGGVDTCQGDSGGPMF  177 (223)
T ss_dssp             -------TCCCCSBCEEEEEEEECHHHHHHHHGGG----SCTTTEEEESCTTTCCCBCCTTCTTCEEE
T ss_pred             -------ccccccccccceeeEeCHHHhhhhhcCC----CccCcceeeeccccCCcCccccccccceE
Confidence                   2344678999999999999999887532    34556666653 45677999999999863

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.8e-27  Score=230.45  Aligned_cols=173  Identities=26%  Similarity=0.538  Sum_probs=122.2

Q ss_pred             CCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEE---------
Q psy12777        400 GKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQI---------  470 (697)
Q Consensus       400 GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~---------  470 (697)
                      +.+||||+|++    +..++|+|+||+++||||||||+.+    ...+++|...+.....  ..+...+..         
T Consensus         1 ~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   70 (228)
T d1sgfa_           1 NSQPWHVAVYR----FNKYQCGGVLLDRNWVLTAAHCYND----KYQVWLGKNNFLEDEP--SDQHRLVSKAIPHPDFNM   70 (228)
T ss_dssp             CCCTTEEEEEC----TTSCCEEEEECSSSEEEECGGGCCS----CCEEEECC----C-CT--TCEEEEEEEEEECTTSCG
T ss_pred             CCCCcEEEEEE----CCcEEEEEEEEcCCEEEeCHHHccC----CceEEEeeeeeccccc--cceeeeeeeeccccceee
Confidence            35799999985    3468899999999999999999974    4568888877655433  234444443         


Q ss_pred             --EEECCCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCCCCccccCCCCcccccccccc
Q psy12777        471 --VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW  548 (697)
Q Consensus       471 --IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~g~~~~s~~~p~~~~~s~~C~  548 (697)
                        +..|+.|+...+.+|||||+|++++.|+++++|||||..... ....+.+.|||.+...                   
T Consensus        71 ~~~~~~~~~~~~~~~~Diall~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~~~g~~~~~~~-------------------  130 (228)
T d1sgfa_          71 SLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGSTCLASGWGSTTPI-------------------  130 (228)
T ss_dssp             GGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEC-------C-------------------
T ss_pred             eeecccCCCCccccccceeEEeeccccccCCceeeEecCccccc-cCcceEEEeeeeccCC-------------------
Confidence              348899998999999999999999999999999999987654 5778999999887652                   


Q ss_pred             cccCCCcccCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccceeeeeeccccccc
Q psy12777        549 NHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQNCRRRES  628 (697)
Q Consensus       549 ~~~~~~~~~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~~i~~~~~~~~~~~  628 (697)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (228)
T d1sgfa_         131 --------------------------------------------------------------------------------  130 (228)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCceEEEEeeechhHHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        629 NLWKMALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       629 ~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                              ....+..|+++.+.++++++|++.+.     ....+.++|++...++.+.|.||+||++
T Consensus       131 --------~~~~~~~l~~~~~~~~~~~~C~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~G~pl  184 (228)
T d1sgfa_         131 --------KFKYPDDLQCVNLKLLPNEDCDKAHE-----MKVTDAMLCAGEMDGGSYTCEHDSGGPL  184 (228)
T ss_dssp             -----------------CEEEEEECTHHHHTTCS-----SBCCTTEEEEEECSSSEEECCCCTTCEE
T ss_pred             --------ccCCCCccEEEEEEEeCHHHhhhhcc-----CCcccceEEeccCCCCccccCCCcCCcE
Confidence                    23446789999999999999998663     2456789999987888899999999976

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

Probab=99.65  E-value=1.7e-18  Score=172.64  Aligned_cols=103  Identities=12%  Similarity=0.127  Sum_probs=63.9

Q ss_pred             CceeeeeEEEee------CcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEE
Q psy12777        415 TYLHKCGAALFN------ENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLAL  488 (697)
Q Consensus       415 ~~~~~CGGTLIS------~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIAL  488 (697)
                      ++.++||||||+      ++||||||||+.+.....+.+++|........     ....+.+..+|+.|+.....+|++|
T Consensus        31 ~g~~~CGGsLI~~~~~~~~~~VLTAAHCv~~~~~~~~~v~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l  105 (263)
T d1arba_          31 SGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTC-----RAPNTPASGANGDGSMSQTQSGSTV  105 (263)
T ss_dssp             TTEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSC-----CCTTSGGGGSCCCCCCCCEEECEEE
T ss_pred             CCcEEEEEEEECCCCCCccceEEEchhhCCCCCCcceEEEEEEEeecccc-----eeeeeeeeecccCccceeeecchhe
Confidence            568999999998      67999999999865444445555554443321     1122444567888887777777777


Q ss_pred             EecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCC
Q psy12777        489 LRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE  528 (697)
Q Consensus       489 LrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~  528 (697)
                      +++..+.++.    .+-|+....  ....++..||+....
T Consensus       106 ~~~~~~~Dia----ll~l~~~~~--~~~~~~~~~~~~~~~  139 (263)
T d1arba_         106 KATYATSDFT----LLELNNAAN--PAFNLFWAGWDRRDQ  139 (263)
T ss_dssp             EEEETTTTEE----EEEESSCCC--GGGCCEEBCEECCSC
T ss_pred             eecCCCccee----eeecccccc--cccceeeeccCcccc
Confidence            7776654432    222322211  133456778877654

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

Probab=99.60  E-value=5.2e-17  Score=154.84  Aligned_cols=119  Identities=13%  Similarity=0.127  Sum_probs=86.1

Q ss_pred             CCCcceEEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCC----CceEEEEccccCCCCCCCCCcEEEEEEEEEEC
Q psy12777        399 FGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPP----SDLLLRLGEHDLSTEEEPYGYQERRVQIVASH  474 (697)
Q Consensus       399 ~GewPW~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~----~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiH  474 (697)
                      ...|||.+.++...   ..+.|+|+||+++||||||||+.+...    ..+.+.+|..+...     ......+.+++.|
T Consensus        14 ~~~~P~~~~~~i~~---~~~~CsG~LI~~~~VLTaaHCv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   85 (215)
T d1p3ca_          14 TRVAPYNSIAYITF---GGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTA-----VNGSANMTEFYVP   85 (215)
T ss_dssp             TTSTTGGGEEEEEC---SSCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBC-----TTCCEEEEEEECC
T ss_pred             CCCCCcEEEEEEEc---CCeEEEEEEEeCCEEEECcceeccCCCCceeeeEEEeccccCCCC-----CceeEEEeEEEEe
Confidence            46699976665432   235799999999999999999976432    24567777654432     2345788999999


Q ss_pred             CCCCC-CCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccccCC
Q psy12777        475 PQFDP-RTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE  528 (697)
Q Consensus       475 P~Yn~-~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~  528 (697)
                      +.|.. ....+|||||||+.++.+.  ..+++|+.... ..++.|.++|||....
T Consensus        86 ~~~~~~~~~~~DiAll~l~~~~~~~--~~~~~~~~~~~-~~~~~~~~~G~~~~~~  137 (215)
T d1p3ca_          86 SGYINTGASQYDFAVIKTDTNIGNT--VGYRSIRQVTN-LTGTTIKISGYPGDKM  137 (215)
T ss_dssp             HHHHHHCCGGGCCEEEEESSCHHHH--HCCCCBCCCSC-CTTCEEEEEECCHHHH
T ss_pred             cccccCCCccceEEEEEeccCCCcc--ccccccccccc-cCCceeEEEcCCCCcC
Confidence            99864 4457899999999988654  34556665443 3689999999987654

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=99.14  E-value=1.1e-11  Score=118.85  Aligned_cols=50  Identities=36%  Similarity=0.684  Sum_probs=46.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+|+|||++.|+.+....+.++|+|+||+++||||||||+...
T Consensus         1 i~~G~~a~~ge~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhC~~~~   50 (230)
T d2hlca_           1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDA   50 (230)
T ss_dssp             CBTCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTTE
T ss_pred             CCCCEECCCCCCCCEEEEEEEecCCCeeEEEEEEEeCCEEEEeeeccccc
Confidence            78999999999999999987777778899999999999999999999863

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.6e-11  Score=118.12  Aligned_cols=48  Identities=31%  Similarity=0.643  Sum_probs=43.3

Q ss_pred             cceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        561 SRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       561 ~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      .||+||++|.+++|||+|.|+.    .+.++|+|+||+++||||||||+.+.
T Consensus         1 ~ri~gG~~a~~~e~Pw~v~i~~----~~~~~C~GtLIs~~~VLTAAhCv~~~   48 (240)
T d1mzaa_           1 MEIIGGKEVSPHSRPFMASIQY----GGHHVCGGVLIDPQWVLTAAHCQYRF   48 (240)
T ss_dssp             CCCCCCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGSCTT
T ss_pred             CEEECCEECCCCCCCcEEEEEE----CCeEEEEEEEEeCCEEEECeEccccc
Confidence            4899999999999999999863    45689999999999999999998864

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.3e-10  Score=109.63  Aligned_cols=48  Identities=38%  Similarity=0.713  Sum_probs=42.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS  614 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~  614 (697)
                      |+||++|..++|||++.|..    .+.++|+|+||+++||||||||+.+...
T Consensus         1 I~gG~~~~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~~~   48 (228)
T d1bioa_           1 ILGGREAEAHARPYMASVQL----NGAHLCGGVLVAEQWVLSAAHCLEDAAD   48 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGGGGCSS
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCcEEEEEEEEeCCEEEECceeeecccc
Confidence            78999999999999999974    4568999999999999999999987544

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.07  E-value=5.6e-11  Score=115.28  Aligned_cols=53  Identities=47%  Similarity=0.901  Sum_probs=48.3

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      +.||+||++|..++|||++.|.......+.++|+|+||+++||||||||+.+.
T Consensus        11 ~~ri~gG~~a~~~~~Pw~v~i~~~~~~~~~~~C~G~LIs~~~VLTaAhC~~~~   63 (251)
T d1pytd_          11 SARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNT   63 (251)
T ss_dssp             SSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTT
T ss_pred             CCeEECCEECCCCCCCcEEEEEEEeCCCceeEEeEEEEcCCeEEEeeeccccc
Confidence            78999999999999999999987666667789999999999999999999864

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.07  E-value=4.2e-11  Score=114.21  Aligned_cols=50  Identities=46%  Similarity=0.891  Sum_probs=44.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++|||++.|+........++|+|+||+++||||||||+.+.
T Consensus         1 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~   50 (240)
T d1gvkb_           1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRE   50 (240)
T ss_dssp             CBTCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCSC
T ss_pred             CCCCEECCCCCCCEEEEEEEecCCccceEEEEEEEeCCEEEECccccccc
Confidence            78999999999999999986555556679999999999999999999875

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.06  E-value=4.3e-11  Score=114.37  Aligned_cols=50  Identities=32%  Similarity=0.511  Sum_probs=44.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+|+|||++.|.......+.++|+|+||+++||||||||+.+.
T Consensus         1 I~gG~~a~~ge~P~~v~i~~~~~~~~~~~C~GtLI~~~~VLTaAhC~~~~   50 (227)
T d1fi8a_           1 IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHCSGSK   50 (227)
T ss_dssp             CBSCEECCTTSSTTEEEEEEECTTC-CCEEEEEEEETTEEEECGGGCCSE
T ss_pred             CCCCEECCCCCCCCEEEEEEEeCCCCceEEEEEEEeCCEEEEeccccccc
Confidence            78999999999999999987667777889999999999999999998763

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=4.5e-11  Score=113.52  Aligned_cols=47  Identities=36%  Similarity=0.675  Sum_probs=42.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+|+|||++.|.   .+++.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~---~~~~~~~C~GtlIs~~~VLTaAhCv~~~   47 (233)
T d2p3ub1           1 IVGGQECKDGECPWQALLI---NEENEGFCGGTILSEFYILTAAHCLYQA   47 (233)
T ss_dssp             CBSSEECCTTSCTTEEEEE---CTTSCEEEEEEECSSSEEEECGGGGGSC
T ss_pred             CCCCEECCCCCCCcEEEEE---ecCCCeEEEEEEEeCCEEEECceecccc
Confidence            7899999999999999986   3456789999999999999999998764

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.5e-11  Score=114.36  Aligned_cols=50  Identities=44%  Similarity=0.884  Sum_probs=44.8

Q ss_pred             CcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       560 ~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ..||+||+++.+++|||++.|+.   +.+.++|+|+||+++||||||||+.+.
T Consensus        15 ~~ri~gG~~a~~~~~Pw~v~i~~---~~~~~~C~GtLIs~~~VLTaAhCv~~~   64 (247)
T d1rjxb_          15 PGAVVGGCVAYPHSWPWQVSLRT---RFGMHFCGGTLISPEWVLTAAHCLEKS   64 (247)
T ss_dssp             CTTSTTCEECCTTSSTTEEEEEE---TTCCEEEEEEEEETTEEEEEGGGGTTC
T ss_pred             CCeEECCEECCCCCCCcEEEEEE---CCCCEEEEEEEEeCCEEEeeeEEEEec
Confidence            67999999999999999999963   355689999999999999999999764

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=6.7e-11  Score=112.88  Aligned_cols=46  Identities=35%  Similarity=0.645  Sum_probs=41.9

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++|||++.|..    ++.++|+|+||+++||||||||+.+.
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhC~~~~   46 (225)
T d1npma_           1 ILEGRECIPHSQPWQAALFQ----GERLICGGVLVGDRWVLTAAHCKKQK   46 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCSS
T ss_pred             CCCCEECCCCCCCCEEEEEE----CCcEEEEEEEEcCCEEEEchHhCccc
Confidence            78999999999999999963    45789999999999999999999864

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=6.5e-11  Score=113.64  Aligned_cols=45  Identities=40%  Similarity=0.823  Sum_probs=41.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+++||||+.|..    .+.++|+|+||+++||||||||+..
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~----~~~~~C~GtLIs~~~VLTaAhCv~~   45 (237)
T d1ao5a_           1 VVGGFNCEKNSQPWQVAVYY----QKEHICGGVLLDRNWVLTAAHCYVD   45 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECTTCCCS
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCcEEEEEEEeeCCEEEECHHHcCC
Confidence            78999999999999999973    4578999999999999999999875

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=8e-11  Score=111.57  Aligned_cols=118  Identities=25%  Similarity=0.342  Sum_probs=84.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccc---------------------eeeeee
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQ---------------------IIPIIQ  621 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~---------------------~i~~~~  621 (697)
                      |+||++|..++|||++.|+.. +..+.++|+|+||+++||||||||+.+....                     +..++.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~-~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~   79 (221)
T d1fuja_           1 IVGGHEAQPHSRPYMASLQMR-GNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVF   79 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEET-TBTTCCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEe-cCCCCEEEEEEEEeCCEEEEeeEEEeecCCccceeeeeccccccccccceeeeeeeEE
Confidence            789999999999999999743 3445689999999999999999999864111                     111121


Q ss_pred             c------------------------------ccccccc-----------cccccccCCCCCCCceEEEEeeechhHHHHH
Q psy12777        622 N------------------------------CRRRESN-----------LWKMALADGPLPSVLQEVSVPVINNSLCETM  660 (697)
Q Consensus       622 ~------------------------------~~~~~~~-----------~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~  660 (697)
                      |                              |++..+.           ||+.....+.....|++..+.+++...|.  
T Consensus        80 ~~~~~~~~~~~diAll~L~~~~~~~~~v~picl~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~--  157 (221)
T d1fuja_          80 LNNYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVVTFFCRP--  157 (221)
T ss_dssp             ECCCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEECTTCCT--
T ss_pred             EeeecCCCCccEEEEEEccccccccceEEEEEecccccccCCCceEEEecccccccccccCccceeeeeeeeeecccc--
Confidence            1                              3332111           47777777777788999999988754332  


Q ss_pred             hhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        661 YRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       661 y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                  .+.|......+.+.|.||+||++
T Consensus       158 ------------~~~~~~~~~~~~~~c~gd~G~pl  180 (221)
T d1fuja_         158 ------------HNICTFVPRRKAGICFGDSGGPL  180 (221)
T ss_dssp             ------------TEEEEECSSSSCBCCTTCTTCEE
T ss_pred             ------------ccceeccccCCCceeCCccCCCE
Confidence                        23344445677899999999986

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.03  E-value=8.2e-11  Score=112.17  Aligned_cols=49  Identities=35%  Similarity=0.536  Sum_probs=43.4

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|..++|||+|.|.. ...+..++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~-~~~~~~~~C~GtLIs~~~VLTaAhC~~~~   49 (224)
T d1eufa_           1 IIGGHEAKPHSRPYMAFLLF-KTSGKSHICGGFLVREDFVLTAAHCLGSS   49 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEE-ESSSSEEEEEEEEEETTEEEECGGGCCEE
T ss_pred             CCCCEECCCCCCCCEEEEEE-EcCCCcEEEEEEEEcCCEEEeeceecccc
Confidence            78999999999999999964 44556789999999999999999998764

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=7.8e-11  Score=112.70  Aligned_cols=46  Identities=33%  Similarity=0.616  Sum_probs=41.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++|||||.|..    ...++|+|+||+++||||||||+.+.
T Consensus         1 ivgG~~a~~~e~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~   46 (232)
T d1orfa_           1 IIGGNEVTPHSRPYMVLLSL----DRKTICAGALIAKDWVLTAAHCNLNK   46 (232)
T ss_dssp             CBSCEECCTTSSTTEEEEEC----SSSCEEEEEEEETTEEEECTTCCCCT
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEecCCEEEEChhhcCCC
Confidence            78999999999999999963    35689999999999999999998764

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=8e-11  Score=113.21  Aligned_cols=129  Identities=31%  Similarity=0.583  Sum_probs=93.1

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccccc-----------------------ce---
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS-----------------------QI---  616 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~-----------------------~~---  616 (697)
                      |+||++|.+++|||+|.|..    .+.++|+|+||+++||||||||+.+...                       .+   
T Consensus         1 iigG~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTAAhCv~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   76 (254)
T d2bz6h1           1 IVGGKVCPKGECPWQVLLLV----NGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQV   76 (254)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEeCCCEEEECcccccCCCCcccceeeccceeeccccccceeeeeeee
Confidence            78999999999999999973    4568999999999999999999876311                       00   


Q ss_pred             --------------eeee-------------ecccccc--------------cccccccccCCCCCCCceEEEEeeechh
Q psy12777        617 --------------IPII-------------QNCRRRE--------------SNLWKMALADGPLPSVLQEVSVPVINNS  655 (697)
Q Consensus       617 --------------i~~~-------------~~~~~~~--------------~~~Wg~~~~~~~~s~vLq~~~V~vis~~  655 (697)
                                    |+++             ..|++..              ..+|+....+.......+.....++..+
T Consensus        77 ~~~~~~~~~~~~~DiAll~L~~~v~~~~~i~picl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (254)
T d2bz6h1          77 IIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQ  156 (254)
T ss_dssp             EEETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHH
T ss_pred             eecccccccccccceeEEEecCcccccceEeeeecCccccccccccCCceEEEeccCccCCCCcccccceeeeecccchh
Confidence                          1111             1144421              1148888877777777777777777776


Q ss_pred             HHHHHhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        656 LCETMYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       656 ~C~~~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                      .|................++|+....+..+.|.|||||++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPl  196 (254)
T d2bz6h1         157 DCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPH  196 (254)
T ss_dssp             HHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEE
T ss_pred             hhhhhhhcccccccccccceeeeccCCCcccccCccccce
Confidence            6554433333334566788888877888999999999986

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.1e-10  Score=111.17  Aligned_cols=117  Identities=24%  Similarity=0.354  Sum_probs=87.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccccc----------------------ceeeee
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS----------------------QIIPII  620 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~----------------------~~i~~~  620 (697)
                      |+||++|..++|||++.|..    .+.++|+|+||+++||||||||+.+...                      .+..++
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (225)
T d1a7sa_           1 IVGGRKARPRQFPFLASIQN----QGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSM   76 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCcEEEEEEEEcCCEEEECeeeeeeccccceeeEEeeeecccccccccceeeeeee
Confidence            78999999999999999963    4578999999999999999999886311                      011122


Q ss_pred             ec------------------------------ccccc-----------cccccccccCCCCCCCceEEEEeeechhHHHH
Q psy12777        621 QN------------------------------CRRRE-----------SNLWKMALADGPLPSVLQEVSVPVINNSLCET  659 (697)
Q Consensus       621 ~~------------------------------~~~~~-----------~~~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~  659 (697)
                      .|                              |++..           ..+|+...........|+.+.+.++++++|..
T Consensus        77 ~~~~~~~~~~~~DIAll~L~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~C~~  156 (225)
T d1a7sa_          77 SENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP  156 (225)
T ss_dssp             ECSSCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT
T ss_pred             eeeeccccccccccchhhcCCcccccccceeEEeeccccccCCCceeEeccccccccccccccceeEEEEEEeehhhccc
Confidence            11                              22111           11588888777788899999999999999964


Q ss_pred             HhhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCCC
Q psy12777        660 MYRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGTD  696 (697)
Q Consensus       660 ~y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~~  696 (697)
                                   .+.|++......+.|+||+||++.
T Consensus       157 -------------~~~~~~~~~~~~~~c~gdsG~Pl~  180 (225)
T d1a7sa_         157 -------------NNVCTGVLTRRGGICNGDGGTPLV  180 (225)
T ss_dssp             -------------TEEEEECSSSSCBCCTTCTTCEEE
T ss_pred             -------------ccceeeecccccccccCCCCCCEE
Confidence                         346777677788999999999874

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.01  E-value=2.1e-09  Score=102.34  Aligned_cols=118  Identities=11%  Similarity=0.009  Sum_probs=66.9

Q ss_pred             CCCcce--EEEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCC--ceEEEEccccCCCCCCCCCcEEEEEEEEEEC
Q psy12777        399 FGKWPW--QISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPS--DLLLRLGEHDLSTEEEPYGYQERRVQIVASH  474 (697)
Q Consensus       399 ~GewPW--~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~--~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiH  474 (697)
                      ..++||  ++.|.... .++.+.|+|+||+++||||||||+.+....  .+.+...........    ........+.. 
T Consensus        14 ~~~~p~~~v~~i~~~~-~~~~~~cTG~lI~~~~vLTAaHcv~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-   87 (216)
T d2o8la1          14 TTNGHYAPVTYIQVEA-PTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYP----NGGFTAEQITK-   87 (216)
T ss_dssp             TTSGGGTTEEEEEEEE-TTEEEEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCT----TCCEEEEEEEE-
T ss_pred             CCcCchheEEEEEEEc-CCCCEEEEEEEEeCCEEEEeeeeeccCCCceEEEEEEecccccceee----eeeEEeeeeec-
Confidence            456787  44554433 345688999999999999999999864322  233333322221111    11222222222 


Q ss_pred             CCCCCCCCCCceEEEecCcccccCCCeeeee---cCCCCCCCCCCEEEEEeccccC
Q psy12777        475 PQFDPRTFEYDLALLRFYEPVKFQPNIIPIC---VPEDDTNFVGTSAHVTGWGRLY  527 (697)
Q Consensus       475 P~Yn~~t~~nDIALLrL~~PV~fs~~V~PIC---LP~~~~~~~G~~c~VtGWG~t~  527 (697)
                           ....+|+|||+|+.+........+.+   +........+....+.||....
T Consensus        88 -----~~~~~D~all~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~  138 (216)
T d2o8la1          88 -----YSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDK  138 (216)
T ss_dssp             -----CSSSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTS
T ss_pred             -----cccCCceEEEEecccccccccccceeeeeccccccccCCceeEEEEccCCC
Confidence                 22357999999988775544333332   2233333357778888886543

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1e-10  Score=111.92  Aligned_cols=47  Identities=36%  Similarity=0.791  Sum_probs=42.1

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |++|+.|.+++|||+|.|..   ....++|+|+||+++||||||||+.+.
T Consensus         1 i~~G~~~~~~e~Pw~v~i~~---~~~~~~C~GtLIs~~~VLTaAhCv~~~   47 (240)
T d1autc_           1 LIDGKMTRRGDSPWQVVLLD---SKKKLACGAVLIHPSWVLTAAHCMDES   47 (240)
T ss_dssp             CBSCEECCTTSCTTEEEEEC---TTSCEEEEEEEEETTEEEECGGGSSSC
T ss_pred             CCCCEECCCCCCCCEEEEEE---CCCCEEEEEEEEeCCEEEECceeccCc
Confidence            78999999999999999963   445789999999999999999999874

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=99.00  E-value=1e-10  Score=111.61  Aligned_cols=50  Identities=36%  Similarity=0.868  Sum_probs=43.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW  613 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~  613 (697)
                      |+||+++.+++||||+.|+. .+....++|+|+||+++||||||||++...
T Consensus         1 i~gG~~~~~~e~Pw~v~l~~-~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~   50 (241)
T d1m9ua_           1 VIGGTNASPGEFPWQLSQQR-QSGSWSHSCGASLLSSTSALSASHCVDGVL   50 (241)
T ss_dssp             CBTCEECCTTSSTTEEEEEE-ESSSEEEEEEEEECSSSEEEECHHHHTTCC
T ss_pred             CCCCEECCCCCCCCEEEEEE-eCCCccEEEEEEEEeCCEEEEChhhccccc
Confidence            78999999999999999874 334456799999999999999999997653

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=99.00  E-value=1e-10  Score=111.63  Aligned_cols=45  Identities=47%  Similarity=0.778  Sum_probs=41.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++.+++|||++.|+     .+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~~~~~~~Pw~v~l~-----~~~~~C~GtLIs~~~VLTAAhCv~~~   45 (222)
T d1hj8a_           1 IVGGYECKAYSQPHQVSLN-----SGYHFCGGSLVNENWVVSAAHCYKSR   45 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEE-----SSSEEEEEEEEETTEEEECGGGCCSS
T ss_pred             CCCCEECCCCCCCeEEEEE-----CCCEEEEEEEeeCCEEEeCceecccc
Confidence            7899999999999999995     35689999999999999999999864

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.00  E-value=1.1e-10  Score=111.67  Aligned_cols=49  Identities=27%  Similarity=0.447  Sum_probs=44.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||.+|..|+|||++.|......+..++|+|+||+++||||||||+.+
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaA~C~~~   49 (224)
T d3rp2a_           1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGR   49 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCCS
T ss_pred             CCCCEECcCCCCCCEEEEEEEeCCCCeEEEEEEEEcCCeeEeccccccc
Confidence            7899999999999999998666667788999999999999999999865

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=9.4e-11  Score=111.98  Aligned_cols=48  Identities=33%  Similarity=0.695  Sum_probs=42.4

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|.+++||||+.|... +..+.++|+|+||+++||||||||+..
T Consensus         1 iigG~~a~~~~~Pw~v~l~~~-~~~~~~~C~GtLIs~~~VLTaAhC~~~   48 (227)
T d1fq3a_           1 IIGGHEAKPHSRPYMAYLMIW-DQKSLKRCGGFLIQDDFVLTAAHCWGS   48 (227)
T ss_dssp             CBTCBCCCTTSCTTEEECCEE-ETTEEECCEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCCEEEEEEE-cCCCcEEEEEEEEeCCEEEeCEeeccc
Confidence            789999999999999998643 344678999999999999999999875

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.2e-10  Score=111.01  Aligned_cols=46  Identities=30%  Similarity=0.522  Sum_probs=41.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |++|++|..++|||++.|..    ++.++|+|+||+++||||||||+.+.
T Consensus         1 i~~G~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~   46 (221)
T d1lo6a_           1 LVHGGPCDKTSHPYQAALYT----SGHLLCGGVLIHPLWVLTAAHCKKPN   46 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCTT
T ss_pred             CCCCEECCCCCCCCEEEEEE----CCcEEEEEEEEeCCEEEECeeccccc
Confidence            78999999999999999963    46789999999999999999998764

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.00  E-value=1.1e-10  Score=110.82  Aligned_cols=45  Identities=42%  Similarity=0.772  Sum_probs=40.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|..++|||+++|+     .+.++|+|+||+++||||||||+.+.
T Consensus         1 i~GG~~a~~~~~Pw~v~l~-----~~~~~C~GtLIs~~~VLTaAhC~~~~   45 (223)
T d1hj9a_           1 IVGGYTCGANTVPYQVSLN-----SGYHFCGGSLINSQWVVSAAHCYKSG   45 (223)
T ss_dssp             CCSCEECCTTSSTTEEEEE-----SSSEEEEEEEEETTEEEECGGGCCSS
T ss_pred             CCCCEECCCCCCCeEEEEE-----CCCEEEEEEEeeCCEEEeCeeECCCc
Confidence            7899999999999999995     35679999999999999999999753

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.3e-10  Score=110.96  Aligned_cols=47  Identities=28%  Similarity=0.443  Sum_probs=43.0

Q ss_pred             CCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        565 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       565 ~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      ||++|.+++|||++.|+....++..++|+|+||+++||||||||+.+
T Consensus         1 GG~~a~~~e~Pw~v~i~~~~~~~~~~~C~G~LIs~~~VLTaAhCv~~   47 (224)
T d1nn6a_           1 GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGR   47 (224)
T ss_dssp             CCEECCTTSSTTEEEEEEECTTSCEEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCcCCcCCCCCCEEEEEEEeCCCCceEEEEEEEeCCEEEehhhcccc
Confidence            69999999999999998766677788999999999999999999975

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.2e-10  Score=110.85  Aligned_cols=48  Identities=29%  Similarity=0.538  Sum_probs=43.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||++|.+++|||++.|+. ..+++.++|+|+||+++||||||||+.+
T Consensus         1 IvgG~~a~~~e~Pw~v~i~~-~~~~~~~~C~GtlI~~~~VLTaAhC~~~   48 (224)
T d1t32a1           1 IIGGRESRPHSRPYMAYLQI-QSPAGQSRCGGFLVREDFVLTAAHCWGS   48 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEE-SSSTTSCEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCCEEEEEE-EcCCCCEEEEEEEEcCCEEEEeEEcccc
Confidence            78999999999999999964 4456678999999999999999999875

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=98.99  E-value=1.1e-10  Score=111.58  Aligned_cols=44  Identities=39%  Similarity=0.776  Sum_probs=40.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++||||+.|.      +.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~------~~~~C~GtLIs~~~VLTaAhCv~~~   44 (235)
T d1tona_           1 IVGGYKCEKNSQPWQVAVI------NEYLCGGVLIDPSWVITAAHCYSNN   44 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEE------SSSEEEEEEEETTEEEECGGGCCSC
T ss_pred             CCCCEECCCCCCCeEEEEc------CCeEEEEEEecCCEEEECceecCCC
Confidence            7899999999999999996      3589999999999999999999763

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=98.98  E-value=1.1e-10  Score=111.18  Aligned_cols=50  Identities=48%  Similarity=1.004  Sum_probs=44.4

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+.|.+++|||++.|.........++|+|+||+++||||||||+.+.
T Consensus         1 iigG~~~~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~   50 (236)
T d1elta_           1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSA   50 (236)
T ss_dssp             CBSSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSSC
T ss_pred             CCCCEECCCCCCCcEEEEEEccCCcceeEEEEEEEeCCEEEECeeecccc
Confidence            78999999999999999976556666679999999999999999998764

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.3e-10  Score=109.90  Aligned_cols=115  Identities=30%  Similarity=0.496  Sum_probs=86.4

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccccccc---------------------eeeeee
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQ---------------------IIPIIQ  621 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~~---------------------~i~~~~  621 (697)
                      |+||++|.+++||||+.|+.    .+.++|+|+||+++||||||||+.+....                     ...+..
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~----~~~~~C~G~LIs~~~VLTaAhC~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   76 (218)
T d2z7fe1           1 IVGGRRARPHAWPFMVSLQL----RGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIF   76 (218)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCeEEEEEEEeCCEEEECeEecccccccceeeeeeeccccccccceeeeeeeeEe
Confidence            78999999999999999973    45789999999999999999998864110                     011111


Q ss_pred             c------------------------------ccccccc-----------cccccccCCCCCCCceEEEEeeechhHHHHH
Q psy12777        622 N------------------------------CRRRESN-----------LWKMALADGPLPSVLQEVSVPVINNSLCETM  660 (697)
Q Consensus       622 ~------------------------------~~~~~~~-----------~Wg~~~~~~~~s~vLq~~~V~vis~~~C~~~  660 (697)
                      |                              |++..+.           +|+....++..+..|+.+.+++++. .|+  
T Consensus        77 ~~~~~~~~~~~diall~l~~~~~~~~~~~pi~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~-~c~--  153 (218)
T d2z7fe1          77 ENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVVTS-LCR--  153 (218)
T ss_dssp             ESCCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEECT-TCC--
T ss_pred             eeccccccccceEEEeeccccceeeeeeeeeeeccCccccCCCcEEEEeccceeecccccccceeEEEeccccc-ccc--
Confidence            1                              3321111           5888877777888999999999874 454  


Q ss_pred             hhhCCcccCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        661 YRAAGFIEHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       661 y~~~~~~~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                                 ..|+|+.......+.|+|||||++
T Consensus       154 -----------~~~~~~~~~~~~~~~C~gdsG~Pl  177 (218)
T d2z7fe1         154 -----------RSNVCTLVRGRQAGVCFGDSGSPL  177 (218)
T ss_dssp             -----------TTSEEEECTTSCCBCCTTCTTCEE
T ss_pred             -----------eeeeeeeecCcccCccccccCCCE
Confidence                       346888876777789999999986

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.97  E-value=1.8e-10  Score=109.84  Aligned_cols=50  Identities=42%  Similarity=0.949  Sum_probs=44.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++..++|||++.|.........++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~   50 (241)
T d1brup_           1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSS   50 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTT
T ss_pred             CCCCEECCCCCCCcEEEEEEcCCCcceEEeEEEEEeCCEEEECeEeeecc
Confidence            78999999999999999986555555679999999999999999998875

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=98.96  E-value=1.5e-10  Score=110.10  Aligned_cols=46  Identities=41%  Similarity=0.720  Sum_probs=41.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++.+++|||+++|..    .+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~----~~~~~C~GtLIs~~~VLTaAhC~~~~   46 (224)
T d1gdna_           1 IVGGTSASAGDFPFIVSISR----NGGPWCGGSLLNANTVLTAAHCVSGY   46 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECHHHHTTS
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEEeCCEEEECcccceec
Confidence            78999999999999999963    46789999999999999999998764

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.96  E-value=1.4e-10  Score=113.55  Aligned_cols=128  Identities=15%  Similarity=0.119  Sum_probs=79.2

Q ss_pred             eeCCeeCCCCCcceE--EEEEEEecCCceeeeeEEEeeCcceeeecccccCCCCCceEEEEccccC--CCCCCCCCcEEE
Q psy12777        391 IVGGEKATFGKWPWQ--ISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDL--STEEEPYGYQER  466 (697)
Q Consensus       391 IVGG~~A~~GewPW~--VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl--~~~~~~~~~q~~  466 (697)
                      +..-......++||.  +.|..    .+...|.|+||++++|||||||+.........+.++....  ...........+
T Consensus        30 ~~~v~~~~~~~~p~~~v~~i~~----~g~~~gTG~lI~~~~ILTa~Hvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (242)
T d1agja_          30 FSKVDEKDRQKYPYNTIGNVFV----KGQTSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEY  105 (242)
T ss_dssp             EEECCTTGGGSTTGGGEEEEEE----TTTEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCE
T ss_pred             hhhccccccccCCcccEEEEEe----CCCccEEEEEEeCCEEEEcccEeccCCCceEEEEEeecceecccceeeeccceE
Confidence            333334455678886  45543    3456799999999999999999975443333333332211  111111112344


Q ss_pred             EEEEEEECCCCCCCCCCCceEEEecCcccc---cCCCeeeeecCCCCCCCCCCEEEEEecccc
Q psy12777        467 RVQIVASHPQFDPRTFEYDLALLRFYEPVK---FQPNIIPICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       467 ~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~---fs~~V~PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                      .+..+..++.    ...+|||||+|+.+..   +...+.|+.|........|+.++++||...
T Consensus       106 ~~~~~~~~~~----~~~~D~All~l~~~~~~~~~~~~~~~~~l~~s~~~~~G~~v~~~GyP~~  164 (242)
T d1agja_         106 EVKEILQEPF----GAGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFD  164 (242)
T ss_dssp             EEEEEESCTT----CTTSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTT
T ss_pred             EEEEEeeecC----CCcCcEEEEEeccccccccccccCcceeecccccccCCcEEEEEEcCCC
Confidence            5666554442    3457999999976543   344678888877654446999999999653

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.95  E-value=2e-10  Score=109.82  Aligned_cols=45  Identities=42%  Similarity=0.803  Sum_probs=41.1

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++.+++|||++.|+     .+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~~~~~~~Pw~v~l~-----~~~~~C~GtLIs~~~VLTaAhCv~~~   45 (223)
T d1j16a_           1 IVGGYTCQENSVPYQVSLN-----SGYHFCGGSLINDQWVVSAAHCYKSR   45 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-----SSSEEEEEEEEETTEEEECGGGCCSS
T ss_pred             CCCCEECCCCCCCcEEEEe-----CCCEEEEEEEEcCCEEEeCHHHCCCc
Confidence            6899999999999999995     35689999999999999999999864

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=98.95  E-value=2.3e-10  Score=109.30  Aligned_cols=46  Identities=35%  Similarity=0.743  Sum_probs=41.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++.+++|||++.|..    .+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~~~~~e~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~   46 (237)
T d1gvza_           1 IIGGWECEKHSKPWQVAVYH----QGHFQCGGVLVHPQWVLTAAHCMSDD   46 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCSS
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCeEEEEEEEEeCCEEEeChhhccCC
Confidence            78999999999999999963    45789999999999999999999764

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.95  E-value=1.5e-10  Score=110.67  Aligned_cols=46  Identities=43%  Similarity=0.912  Sum_probs=41.3

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++..++|||++.|+.    .+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~   46 (235)
T d1ekbb_           1 IVGGSDSREGAWPWVVALYF----DDQQVCGASLVSRDWLVSAAHCVYGR   46 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEECSSSEEEECHHHHTTC
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEEcCCEEEEChhhccCC
Confidence            78999999999999999963    45689999999999999999998763

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=98.95  E-value=2.4e-10  Score=109.78  Aligned_cols=50  Identities=46%  Similarity=0.866  Sum_probs=44.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++..++|||++.|.......+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~   50 (237)
T d2f91a1           1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGD   50 (237)
T ss_dssp             CBSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTS
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCCcEEEEEEEEeCCEEEECccccccc
Confidence            78999999999999999986556666679999999999999999998764

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.6e-10  Score=109.32  Aligned_cols=49  Identities=41%  Similarity=0.956  Sum_probs=43.2

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++.+++|||++.|+. .+.+..++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~-~~~~~~~~C~GtLIs~~~VLTaAhCv~~~   49 (237)
T d1xx9a_           1 IVGGTASVRGEWPWQVTLHT-TSPTQRHLCGGSIIGNQWILTAAHCFYGV   49 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEE-ESSSEEEEEEEEEEETTEEEECGGGGTTC
T ss_pred             CCCCEECCCCCCCcEEEEEE-CCCCccEEEEEEEEeCCEEEeCeEeeecc
Confidence            78999999999999999974 34455679999999999999999998764

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.7e-10  Score=109.74  Aligned_cols=46  Identities=50%  Similarity=0.952  Sum_probs=41.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++.+++|||++.|.    ..+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~~~~~~~Pw~v~i~----~~~~~~C~GtLI~~~~VLTaAhCv~~~   46 (235)
T d1rfna_           1 VVGGEDAKPGQFPWQVVLN----GKVDAFCGGSIVNEKWIVTAAHCVETG   46 (235)
T ss_dssp             CBTCEECCTTSSTTEEEEE----SSSTTCEEEEEEETTEEEECGGGCCTT
T ss_pred             CCCCEECCCCCcCCEEEEe----cCCCEEEEEEEeeCCEEEEChhhcCCC
Confidence            7899999999999999985    345689999999999999999999875

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=98.95  E-value=2.1e-10  Score=109.54  Aligned_cols=47  Identities=36%  Similarity=0.633  Sum_probs=41.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|..++|||++.|..   ..+.++|+|+||+++||||||||+...
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~---~~~~~~C~GtLIs~~~VLTaAhCv~~~   47 (228)
T d1fxya_           1 IVGGYNCKDGEVPWQALLIN---EENEGFCGGTILSEFYILTAAHCLYQA   47 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEEC---TTSCEEEEEEECSSSEEEECGGGTTSC
T ss_pred             CCCCEECCCCCCCcEEEEEE---cCCCeEEEEEEeeCCEEEECceeeecc
Confidence            68999999999999999863   345689999999999999999998764

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=98.94  E-value=1.7e-10  Score=110.22  Aligned_cols=46  Identities=39%  Similarity=0.765  Sum_probs=41.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|..++|||++.|+.    .+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~a~~~~~Pw~V~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~   46 (226)
T d1azza_           1 IVGGVEAVPNSWPHQAALFI----DDMYFCGGSLISPEWILTAAHCMDGA   46 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTTEEEEEEEEETTEEEECHHHHTTC
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCcEEEEEEEeeCCEEEEChhhccCC
Confidence            78999999999999999974    35789999999999999999998764

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.6e-10  Score=112.50  Aligned_cols=48  Identities=42%  Similarity=0.706  Sum_probs=40.1

Q ss_pred             CCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       558 ~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      .++.||+||+++..++||||+.|.       .++|+|+||+++||||||||+.+.
T Consensus         9 ~~~~ri~gG~~~~~~~~Pw~v~l~-------~~~C~GtLIs~~~VLTaAhCv~~~   56 (259)
T d1elva1           9 EEKQRIIGGSDADIKNFPWQVFFD-------NPWAGGALINEYWVLTAAHVVEGN   56 (259)
T ss_dssp             -----CBTCEECCGGGSTTEEEEE-------TTEEEEEEEETTEEEECHHHHTTC
T ss_pred             CCCCceECCEECCCCCcceEEEeC-------CceEEEEEEeCCEEEecccccccc
Confidence            347899999999999999999995       369999999999999999998764

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.1e-10  Score=110.61  Aligned_cols=49  Identities=49%  Similarity=1.002  Sum_probs=43.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|..++|||++.|+. .+....++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~-~~~~~~~~C~GtLIs~~~VLTaAhCv~~~   49 (243)
T d2fpza1           1 IVGGQEAPRSKWPWQVSLRV-HGPYWMHFCGGSLIHPQWVLTAAHCVGPD   49 (243)
T ss_dssp             CBSCEECCTTSCTTEEEEEE-CSSSCEEEEEEEEEETTEEEECHHHHCSB
T ss_pred             CCCCEECCCCCCCcEEEEEE-CCCcccEEEEEEEEeCCEEEECceeccCC
Confidence            78999999999999999963 45556679999999999999999998763

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=98.94  E-value=2.8e-10  Score=109.14  Aligned_cols=46  Identities=30%  Similarity=0.621  Sum_probs=41.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++||||+.|..    .+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~----~~~~~C~G~LIs~~~VLTaAhCv~~~   46 (234)
T d1op0a_           1 VIGGNECDINEHRFLVAFFN----TTGFFCGGTLINPEWVVTAAHCDSTD   46 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEEEETTEEEECGGGCCSS
T ss_pred             CCCCEECCCCCcCcEEEEEE----CCcEEEEEEEEcCCEEEECceeCCCC
Confidence            78999999999999999973    35689999999999999999998764

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.3e-10  Score=112.15  Aligned_cols=43  Identities=42%  Similarity=0.746  Sum_probs=39.6

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      |+||+++.+|+|||||.|+      +.++|+|+||+++||||||||+.+
T Consensus         1 i~gG~~~~~g~~Pw~v~i~------~~~~C~GtLIs~~~VLTaAhCv~~   43 (242)
T d1q3xa1           1 IYGGQKAKPGDFPWQVLIL------GGTTAAGALLYDNWVLTAAHAVYE   43 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEC------SSSSEEEEEETTTEEEECHHHHHH
T ss_pred             CCCCEECCCCCcCcEEEEc------CCCEEEEEEEcCCEEEEChhhccC
Confidence            7899999999999999995      357999999999999999999865

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=98.93  E-value=2e-10  Score=108.59  Aligned_cols=46  Identities=52%  Similarity=0.987  Sum_probs=41.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|..++|||++.|+.    ++.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~   46 (222)
T d1eq9a_           1 IVGGKDAPVGKYPYQVSLRL----SGSHRCGASILDNNNVLTAAHCVDGL   46 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEEE----TTEEEEEEEECSSSEEEECHHHHTTC
T ss_pred             CCCCEECCCCCCCcEEEEEE----CCCEEEEEEEEeCCEEEECceecccc
Confidence            78999999999999999963    45789999999999999999998864

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=98.93  E-value=1.9e-10  Score=110.30  Aligned_cols=42  Identities=40%  Similarity=0.863  Sum_probs=39.0

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+.+.+|+|||++.|+        ++|+|+||+++||||||||+.+.
T Consensus         1 ~~gG~~~~~~~~Pw~v~l~--------~~C~GtLIs~~~VLTaAhCv~~~   42 (223)
T d1os8a_           1 VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSGS   42 (223)
T ss_dssp             CBSCEECCTTSSTTEEEET--------TTEEEEEEETTEEEECGGGSSCS
T ss_pred             CCCCEECCCCCCCcEEEEe--------ccEeEEEEeCCEEEEChhhccCC
Confidence            7899999999999999994        68999999999999999999754

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=4.1e-10  Score=109.56  Aligned_cols=46  Identities=48%  Similarity=1.112  Sum_probs=41.5

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||+++..++|||+|.|+.    .+.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~~~~~e~Pw~v~I~~----~~~~~C~GtLIs~~~VLTaAhCv~~~   46 (255)
T d1z8ga1           1 IVGGRDTSLGRWPWQVSLRY----DGAHLCGGSLLSGDWVLTAAHCFPER   46 (255)
T ss_dssp             CBSCEECCTTSSTTEEEEEE----TTEEEEEEEESSSSEEEECGGGCCGG
T ss_pred             CCCCEECCCCCcCcEEEEEE----CCcEEEEEEEEeCCEEEECceecCCC
Confidence            78999999999999999863    35689999999999999999999864

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=4.3e-10  Score=108.70  Aligned_cols=47  Identities=51%  Similarity=0.973  Sum_probs=41.7

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|.+++|||++.|..   .++.++|+|+||+++||||||||+.+.
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~---~~~~~~C~GtlIs~~~VLTaA~Cv~~~   47 (241)
T d1eaxa_           1 VVGGTDADEGEWPWQVSLHA---LGQGHICGASLISPNWLVSAAHCYIDD   47 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEE---TTTEEEEEEEECSSSEEEECGGGGCCB
T ss_pred             CCCCEECCCCCCCcEEEEEE---CCCCEEEEEEEEcCCEEEECeeeeecC
Confidence            78999999999999999863   345679999999999999999998763

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.8e-09  Score=104.02  Aligned_cols=45  Identities=33%  Similarity=0.682  Sum_probs=39.4

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||.++... +|||+.|..    ++.++|+|+||+++||||||||+.+.
T Consensus         1 ~~~g~~~~~~-~~w~vsi~~----~~~~~C~GtLIs~~~VLTaAhCv~~~   45 (234)
T d1si5h_           1 VVNGIPTRTN-IGWMVSLRY----RNKHICGGSLIKESWVLTARQCFPSR   45 (234)
T ss_dssp             CBSCEECSSC-CTTEEEEEE----SSSEEEEEEEEETTEEEEEGGGCSSS
T ss_pred             CCCCEeCCCC-cCeEEEEEE----CCcEEEEEEEEeCCEEEECcCccCCC
Confidence            6899999774 999999964    35689999999999999999999865

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=9.6e-10  Score=106.12  Aligned_cols=44  Identities=39%  Similarity=0.779  Sum_probs=39.8

Q ss_pred             eeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       563 I~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      |+||++|..++|||++.|+.      .++|+|+||+++||||||||+.+.
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~------~~~C~GtLIs~~~VLTaAhC~~~~   44 (240)
T d2qy0b1           1 IIGGQKAKMGNFPWQVFTNI------HGRGGGALLGDRWILTAAHTLYPK   44 (240)
T ss_dssp             CBSCEECCTTSSTTEEEEES------SSEEEEEEETTTEEEECHHHHSCS
T ss_pred             CCCCEECCCCCcCCEEEECC------CceEEEEEEcCCEEEEChHhCCCc
Confidence            78999999999999999963      468999999999999999998754

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.9e-09  Score=107.79  Aligned_cols=45  Identities=29%  Similarity=0.482  Sum_probs=37.4

Q ss_pred             cccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeecccccc
Q psy12777        567 EKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED  611 (697)
Q Consensus       567 ~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~  611 (697)
                      +++..++|||||.|.......+.++|+|+||+++||||||||+..
T Consensus         9 ~~t~~~e~PW~v~i~~~~~~~~~~~C~GtLIs~~~VLTAAhCv~~   53 (287)
T d1rrka1           9 KGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV   53 (287)
T ss_dssp             TCCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCT
T ss_pred             CCCCcCCCCCEEEEEEEECCCCcEEEEEEEecCCEEEEChhheec
Confidence            456688999999998655666778999999999999999999864

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.66  E-value=7.7e-09  Score=98.73  Aligned_cols=42  Identities=36%  Similarity=0.889  Sum_probs=35.3

Q ss_pred             cccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccccc
Q psy12777        573 KWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS  614 (697)
Q Consensus       573 ~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~~~  614 (697)
                      .|||||.|+........++|+|+||+++||||||||+.+...
T Consensus         1 ~~PW~v~l~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~   42 (232)
T d1fona_           1 SWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTSRT   42 (232)
T ss_dssp             CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCTTSC
T ss_pred             CCccEEEEEEeCCCceEEEEEEEEecCCEEEEChhhccCCCc
Confidence            499999998655555567999999999999999999987643

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.41  E-value=5.5e-08  Score=92.21  Aligned_cols=36  Identities=36%  Similarity=0.871  Sum_probs=31.2

Q ss_pred             cccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        573 KWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       573 ~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      .+|||+.|..    ++.++|+|+||+++||||||||+.+.
T Consensus         2 ~~Pw~v~i~~----~~~~~C~GtLIs~~~VLTaAhCv~~~   37 (228)
T d1sgfa_           2 SQPWHVAVYR----FNKYQCGGVLLDRNWVLTAAHCYNDK   37 (228)
T ss_dssp             CCTTEEEEEC----TTSCCEEEEECSSSEEEECGGGCCSC
T ss_pred             CCCcEEEEEE----CCcEEEEEEEEcCCEEEeCHHHccCC
Confidence            4699999973    45689999999999999999999763

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

Probab=98.40  E-value=2.2e-08  Score=91.89  Aligned_cols=63  Identities=21%  Similarity=0.258  Sum_probs=42.3

Q ss_pred             eeeee-EEEe---eCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecC
Q psy12777        417 LHKCG-AALF---NENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFY  492 (697)
Q Consensus       417 ~~~CG-GTLI---S~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~  492 (697)
                      .+.|. |.++   +.+||||||||+...  .  .+.+.     .     ..+.+.+.....|++       +|+|+++++
T Consensus        11 ~~~Ct~Gf~v~~~g~~~ilTAaHCv~~~--~--~~~~~-----~-----~~~~~~~~~~~~~~~-------~D~a~~~~~   69 (187)
T d1hpga_          11 GSRCSAAFNVTKGGARYFVTAGHCTNIS--A--NWSAS-----S-----GGSVVGVREGTSFPT-------NDYGIVRYT   69 (187)
T ss_dssp             TEEEECCEEEEETTEEEEEECHHHHTTC--S--EEESS-----T-----TCCEEEEEEEEECSB-------SCEEEEEEC
T ss_pred             CCeEeeeEEEEcCCCcEEEEchhcCCCC--C--eeEEC-----C-----CCEEEEEEEeecccC-------Cchhheecc
Confidence            46797 7777   557999999999752  1  12211     1     235566777777776       499999998


Q ss_pred             cccccCCC
Q psy12777        493 EPVKFQPN  500 (697)
Q Consensus       493 ~PV~fs~~  500 (697)
                      .+......
T Consensus        70 ~~~~~~~~   77 (187)
T d1hpga_          70 DGSSPAGT   77 (187)
T ss_dssp             SSCCCCSE
T ss_pred             cCccccee
Confidence            77655443

>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Exfoliative toxin B
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.15  E-value=4e-06  Score=82.26  Aligned_cols=124  Identities=15%  Similarity=0.166  Sum_probs=72.2

Q ss_pred             eCCCCCcce--EEEEEEEecCCceeeeeEEEeeCcceeeecccccCCC--CCceEEEEccccCCCCC-CCCCcEEEEEEE
Q psy12777        396 KATFGKWPW--QISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP--PSDLLLRLGEHDLSTEE-EPYGYQERRVQI  470 (697)
Q Consensus       396 ~A~~GewPW--~VsL~~~~~~~~~~~CGGTLIS~rwVLTAAHC~~~~~--~~~l~V~LG~~dl~~~~-~~~~~q~~~V~~  470 (697)
                      -....++||  ++.|..    .+..+|.|.||++++||||+||+.+..  ...+.+..+........ .......+.+..
T Consensus        28 v~d~~~~p~~~v~~i~~----~g~~~GTGflI~~~~ILTa~HVv~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (246)
T d1qtfa_          28 ITDNARSPYNSVGTVFV----KGSTLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEE  103 (246)
T ss_dssp             CSCCSSTTGGGEEEEEE----TTTEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEE
T ss_pred             ecccccCccccEEEEEe----CCCceEEEEEEeCCeEEEchhecccCCcceEEEEEecCCcceeeeeeecCCCceEEEEE
Confidence            344566777  555543    345789999999999999999997532  22344445443221111 111233455555


Q ss_pred             EEECCCCCCCCCCCceEEEecCcccccCCCeee---eecCCCCCCCCCCEEEEEeccccC
Q psy12777        471 VASHPQFDPRTFEYDLALLRFYEPVKFQPNIIP---ICVPEDDTNFVGTSAHVTGWGRLY  527 (697)
Q Consensus       471 IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V~P---ICLP~~~~~~~G~~c~VtGWG~t~  527 (697)
                      +..++.    ....|||||+|............   +.+........++...++||....
T Consensus       104 ~~~~~~----~~~~DiAll~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~P~~~  159 (246)
T d1qtfa_         104 IKESPY----GQGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNY  159 (246)
T ss_dssp             EESCTT----CTTSCCEEEEECCCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTT
T ss_pred             EEecCC----cccCceEEEEeccccccccccccCceeeccccccccCCCEEEEEeCCCCC
Confidence            554432    33569999999876544333222   222222222358899999996543

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

Probab=98.15  E-value=2.8e-07  Score=90.37  Aligned_cols=28  Identities=4%  Similarity=-0.022  Sum_probs=24.8

Q ss_pred             cCcCCCeEEEeeCCCCCCCCcccCCCCC
Q psy12777        668 EHIPEIFICAGWRKGSFDSCEEHARDGT  695 (697)
Q Consensus       668 ~~i~~~~ICAG~~~g~~dtCqGDSGgg~  695 (697)
                      ..+...|+|++...++.++|+|||||++
T Consensus       171 ~~~~~~~~c~~~~~~~~~~c~GDSGGPL  198 (263)
T d1arba_         171 GGAGTTHLNVQWQPSGGVTEPGSSGSPI  198 (263)
T ss_dssp             SSSCSSEEEEECCTTSCCCCTTCTTCEE
T ss_pred             CCCCccEEEEEecCCCccccCCCCcceE
Confidence            4577899999988888899999999987

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

Probab=97.52  E-value=1.2e-05  Score=75.03  Aligned_cols=39  Identities=21%  Similarity=0.173  Sum_probs=29.8

Q ss_pred             CCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        571 FGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       571 ~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ...+||++.++..   .+.+.|+|+||+++||||||||+.+.
T Consensus        14 ~~~~P~~~~~~i~---~~~~~CsG~LI~~~~VLTaaHCv~~~   52 (215)
T d1p3ca_          14 TRVAPYNSIAYIT---FGGSSCTGTLIAPNKILTNGHCVYNT   52 (215)
T ss_dssp             TTSTTGGGEEEEE---CSSCEEEEEEEETTEEEECHHHHEET
T ss_pred             CCCCCcEEEEEEE---cCCeEEEEEEEeCCEEEECcceeccC
Confidence            3558998655421   23468999999999999999998754

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.25  E-value=6.7e-05  Score=70.45  Aligned_cols=41  Identities=12%  Similarity=0.033  Sum_probs=31.9

Q ss_pred             CcccceE-EEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        572 GKWPWQI-SLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       572 g~~Pw~~-~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ..+||++ ........++.++|.|+||++++|||||||+.+.
T Consensus        15 ~~~p~~~v~~i~~~~~~~~~~cTG~lI~~~~vLTAaHcv~~~   56 (216)
T d2o8la1          15 TNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDAT   56 (216)
T ss_dssp             TSGGGTTEEEEEEEETTEEEEEEEEEEETTEEEECHHHHHTT
T ss_pred             CcCchheEEEEEEEcCCCCEEEEEEEEeCCEEEEeeeeeccC
Confidence            3578883 3234455677889999999999999999998864

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

Probab=96.43  E-value=0.00091  Score=64.08  Aligned_cols=54  Identities=13%  Similarity=0.120  Sum_probs=36.3

Q ss_pred             cCCCcceeCCcccCCCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        557 LFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       557 ~~p~~rI~~g~~~~~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ..++.++..-.......+||++-.+.+  ..+..+|.|+||++++|||||||+.+.
T Consensus        24 ~~~~~~~~~v~~~~~~~~p~~~v~~i~--~~g~~~gTG~lI~~~~ILTa~Hvv~~~   77 (242)
T d1agja_          24 NLPKELFSKVDEKDRQKYPYNTIGNVF--VKGQTSATGVLIGKNTVLTNRHIAKFA   77 (242)
T ss_dssp             GSCTTTEEECCTTGGGSTTGGGEEEEE--ETTTEEEEEEECSSSEEEECHHHHGGG
T ss_pred             HcChHHhhhccccccccCCcccEEEEE--eCCCccEEEEEEeCCEEEEcccEeccC
Confidence            344444444344455678998433221  135668999999999999999999764

>d2qaaa1 b.47.1.1 (A:16-242) Protease B {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease B
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=96.37  E-value=0.0019  Score=59.64  Aligned_cols=86  Identities=14%  Similarity=0.172  Sum_probs=45.7

Q ss_pred             eeee-EEEe---eCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCc
Q psy12777        418 HKCG-AALF---NENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYE  493 (697)
Q Consensus       418 ~~CG-GTLI---S~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~  493 (697)
                      ..|. |..+   +.++|||||||+....    .+.+...         ....+.......||.       +|+||||++.
T Consensus        12 ~~CT~Gf~v~~~~~~~ilTA~Hcv~~~~----~~~~~~~---------~~~~~g~~~~~~~~~-------~D~All~~~~   71 (185)
T d2qaaa1          12 GRCSLGFNVRSGSTYYFLTAGHCTDGAT----TWWANSA---------RTTVLGTTSGSSFPN-------NDYGIVRYTN   71 (185)
T ss_dssp             CEEECCEEEEETTEEEEEECHHHHTTCC----EEESSTT---------SCSEEEEEEEEECSB-------SCEEEEEECC
T ss_pred             CcEeeeEeEEECCccEEEECCCccCCCC----EEEEEcC---------CCeEeeeEEeccCCC-------CCeEEEEecc
Confidence            4687 7766   3459999999997521    1221111         112233333444554       6999999986


Q ss_pred             ccccCCCe-eeeecCCCCCCCCCCEEEEEec
Q psy12777        494 PVKFQPNI-IPICVPEDDTNFVGTSAHVTGW  523 (697)
Q Consensus       494 PV~fs~~V-~PICLP~~~~~~~G~~c~VtGW  523 (697)
                      +....... ...-+........|+.+...|+
T Consensus        72 ~~~~~~~~~~~~~v~~~~~~~~G~~v~~~G~  102 (185)
T d2qaaa1          72 TTIPKDGTVGGQDITSAANATVGMAVTRRGS  102 (185)
T ss_dssp             SSSCCCSEETTEECCEECCCCTTCEEEEEET
T ss_pred             CCcccccccCceeccCCCcCCCCCEEEEccC
Confidence            54322211 1111221222235888877776

>d1lcya2 b.47.1.1 (A:6-210) Mitochondrial serine protease HtrA2, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Mitochondrial serine protease HtrA2, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0034  Score=58.86  Aligned_cols=83  Identities=19%  Similarity=0.147  Sum_probs=50.9

Q ss_pred             eeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccccc
Q psy12777        419 KCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF  497 (697)
Q Consensus       419 ~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~f  497 (697)
                      .-.|.+|+++ +|||+|||+.+  ...+.|...           ....+..+-+..++       ..|+|||+++.+-. 
T Consensus        43 ~GSGf~i~~~G~IlT~~HVv~~--~~~i~V~~~-----------~g~~~~a~vv~~d~-------~~dlall~~~~~~~-  101 (205)
T d1lcya2          43 NGSGFVVAADGLIVTNAHVVAD--RRRVRVRLL-----------SGDTYEAVVTAVDP-------VADIATLRIQTKEP-  101 (205)
T ss_dssp             EEEEEEEETTTEEEECHHHHTT--CSEEEEECT-----------TSCEEEEEEEEEET-------TTTEEEEECCCSSC-
T ss_pred             ceEEEEEECCCeEEEechhhhh--hhhcccccc-----------ccccccceeeeeec-------ceeeEEEEecCCCC-
Confidence            3568899987 99999999976  334555321           11223333333343       35999999875432 


Q ss_pred             CCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        498 QPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       498 s~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                         +.++-|........|+.+++.|+-.
T Consensus       102 ---~~~l~l~~~~~~~~G~~v~~iG~P~  126 (205)
T d1lcya2         102 ---LPTLPLGRSADVRQGEFVVAMGSPF  126 (205)
T ss_dssp             ---CCCCCBCCGGGCCTTCEEEECCCTT
T ss_pred             ---CcEEEccccccCCCCCEEEEEECCc
Confidence               3344454433333588999888744

>d2z9ia2 b.47.1.1 (A:6-226) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease PepD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.22  E-value=0.0049  Score=58.17  Aligned_cols=100  Identities=16%  Similarity=0.265  Sum_probs=54.6

Q ss_pred             ceEEEEEEEecCCceeeeeEEEeeCc-ceeeecccccCC-------CCCceEEEEccccCCCCCCCCCcEEEEEEEEEEC
Q psy12777        403 PWQISLRQWIRSTYLHKCGAALFNEN-WAVTAAHCVEDV-------PPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASH  474 (697)
Q Consensus       403 PW~VsL~~~~~~~~~~~CGGTLIS~r-wVLTAAHC~~~~-------~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiH  474 (697)
                      |-+|.|.... ........|.+|+++ +|||+||++.+.       ....+.|.+..           ...+...-+...
T Consensus        12 ~svV~I~~~~-~~~~~~GSGfvi~~~G~IlTn~HVV~~~~~~~~~~~~~~i~v~~~d-----------g~~~~a~vi~~d   79 (221)
T d2z9ia2          12 PSVVMLETDL-GRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD-----------GRTAPFTVVGAD   79 (221)
T ss_dssp             GGEEEEEEEC-----CEEEEEECCTTSEEEECHHHHHHHHCCC------EEEEEETT-----------SCEECCEEEEEE
T ss_pred             CcEEEEEecc-CCcCcceEEEEEECCCEEEEcHHHhhccccccccccCceEEEEcCC-----------ceeeeeeeEeec
Confidence            6677776422 223346889999987 999999998531       12234444321           112222222222


Q ss_pred             CCCCCCCCCCceEEEecCcccccCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        475 PQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       475 P~Yn~~t~~nDIALLrL~~PV~fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                      +       ..|||||++..+.....    ..+-.......|..+.+.|+-.
T Consensus        80 ~-------~~DlAll~~~~~~~~~~----~~~~~~~~~~~g~~v~~~g~p~  119 (221)
T d2z9ia2          80 P-------TSDIAVVRVQGVSGLTP----ISLGSSSDLRVGQPVLAIGSPL  119 (221)
T ss_dssp             T-------TTTEEEEECCSCCSCCC----CEECCGGGCCTTCEEEEEECGG
T ss_pred             c-------ccceeeeeeccccccee----eccccccccccCceeeeeeccC
Confidence            2       46999999987654321    1122222222588999998754

>d2qf3a1 b.47.1.1 (A:43-252) Stress sensor protease DegS, catalytic domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Stress sensor protease DegS, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=95.67  E-value=0.027  Score=52.65  Aligned_cols=87  Identities=15%  Similarity=0.228  Sum_probs=53.8

Q ss_pred             eeeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        418 HKCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       418 ~~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      ....|.+|+++ ||||++|.+.+  ...+.|.+..           ...+....+..++       .+|||||++..+..
T Consensus        36 s~GSGfvi~~~G~IlTn~HVV~~--~~~i~v~~~~-----------~~~~~~~~~~~~~-------~~Dlall~~~~~~~   95 (210)
T d2qf3a1          36 TLGSGVIMDQRGYIITNKHVIND--ADQIIVALQD-----------GRVFEALLVGSDS-------LTDLAVLKINATGG   95 (210)
T ss_dssp             EEEEEEECSTTCEEEEEHHHHTT--CSEEEEECTT-----------SCEEECEEEEEET-------TTTEEEEECCCSSC
T ss_pred             cceEEEEEECCceEEechhhccc--cccccccccc-----------ccceeeEEecccc-------ccchhheecccccc
Confidence            35889999976 99999999975  3455665321           1223333333443       36999999976543


Q ss_pred             cCCCeeeeecCCCCCCCCCCEEEEEeccccCC
Q psy12777        497 FQPNIIPICVPEDDTNFVGTSAHVTGWGRLYE  528 (697)
Q Consensus       497 fs~~V~PICLP~~~~~~~G~~c~VtGWG~t~~  528 (697)
                      +.    +..|........+..+.+.|+.....
T Consensus        96 ~~----~~~~~~~~~~~~g~~v~~~G~p~~~~  123 (210)
T d2qf3a1          96 LP----TIPINARRVPHIGDVVLAIGNPYNLG  123 (210)
T ss_dssp             CC----CCCCCTTCCCCTTBEEEEEECGGGSS
T ss_pred             cc----ccccccccccccceEEEEeccccccc
Confidence            22    33333333333588999999865443

>d1l1ja_ b.47.1.1 (A:) Protease Do (DegP, HtrA), catalytic domain {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease Do (DegP, HtrA), catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.62  E-value=0.012  Score=56.29  Aligned_cols=84  Identities=13%  Similarity=0.172  Sum_probs=50.4

Q ss_pred             eeeEEEeeCc-ceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCccccc
Q psy12777        419 KCGAALFNEN-WAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF  497 (697)
Q Consensus       419 ~CGGTLIS~r-wVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~f  497 (697)
                      ...|.+|+++ ||||++|++.+.  ..+.|....           ......+-+..       ....|+|||++...-  
T Consensus        57 ~GSGfiI~~~G~IlTn~HVv~~~--~~~~v~~~~-----------~~~~~a~v~~~-------~~~~dlall~v~~~~--  114 (228)
T d1l1ja_          57 LGSGFIFDPEGYILTNYHVVGGA--DNITVTMLD-----------GSKYDAEYIGG-------DEELDIAVIKIKASD--  114 (228)
T ss_dssp             EEEEEEEETTTEEEEEHHHHSSC--SSCEEECTT-----------SCEEEBCCCEE-------ETTTTEEEEEBCCSS--
T ss_pred             ceEEEEeecCceEEeeccccccc--ccceEEeec-----------ceeEeEEEeee-------cccccceeeEeecCC--
Confidence            5789999876 999999999763  344443221           11111111111       234699999986432  


Q ss_pred             CCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        498 QPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       498 s~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                       ..+.++-|........|+.+++.|+-.
T Consensus       115 -~~~~~l~l~~s~~~~~G~~V~aiG~P~  141 (228)
T d1l1ja_         115 -KKFPYLEFGDSDKVKIGEWAIAIGNPL  141 (228)
T ss_dssp             -SCCCCCEECCGGGCCTTCEEEEEECTT
T ss_pred             -CCCceEEccCccccccCCcEEEEECCC
Confidence             233455565433333699999999843

>d2sgaa_ b.47.1.1 (A:) Protease A {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease A
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=95.05  E-value=0.014  Score=53.53  Aligned_cols=80  Identities=20%  Similarity=0.350  Sum_probs=43.9

Q ss_pred             eeee-EEEeeC---cceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCc
Q psy12777        418 HKCG-AALFNE---NWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYE  493 (697)
Q Consensus       418 ~~CG-GTLIS~---rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~  493 (697)
                      ..|. |..+..   .+|||||||+.....    +.+|..                 .-..||       .+|+|||+++.
T Consensus        12 ~~ct~Gf~v~~~~~~~vlTA~Hc~~~~~~----~~vg~~-----------------~g~~~p-------~~D~Ali~~~~   63 (181)
T d2sgaa_          12 SRCSLGFNVSVNGVAHALTAGHCTNISAS----WSIGTR-----------------TGTSFP-------NNDYGIIRHSN   63 (181)
T ss_dssp             EEEECCEEEEETTEEEEEECHHHHTTCSE----ETTEEE-----------------EEEECS-------BSCEEEEEESC
T ss_pred             ccEeeeEeEEECCCCEEEEChhhCCCCCe----EEEEec-----------------cCccCC-------ccceEEEEecC
Confidence            3587 665533   489999999965321    111111                 011244       36999999998


Q ss_pred             ccccCCCee-----eeecCCCCCCCCCCEEEEEeccc
Q psy12777        494 PVKFQPNII-----PICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       494 PV~fs~~V~-----PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                      +..+...+.     .+-+........|+.+...|+..
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~G~~~  100 (181)
T d2sgaa_          64 PAAADGRVYLYNGSYQDITTAGNAFVGQAVQRSGSTT  100 (181)
T ss_dssp             GGGCCCEEECSSSCEEECCEECCCCTTCEEEEEETTT
T ss_pred             cccccceeecCCCceeeecCCCcCCCCCEEEEeCCCC
Confidence            776543221     11111111222588888888743

>d1ky9a2 b.47.1.1 (A:11-259) Protease Do (DegP, HtrA), catalytic domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease Do (DegP, HtrA), catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=94.16  E-value=0.046  Score=53.01  Aligned_cols=82  Identities=21%  Similarity=0.374  Sum_probs=53.1

Q ss_pred             eeeEEEeeC--cceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        419 KCGAALFNE--NWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       419 ~CGGTLIS~--rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      .-.|.+|+.  .||||.+|.+.+  ...+.|.+..           ...+..+.+...+.       .|+|||+++.+- 
T Consensus        77 ~GSG~iI~~~~g~IlTn~HVv~~--~~~~~v~~~~-----------~~~~~a~~~~~d~~-------~dlavl~i~~~~-  135 (249)
T d1ky9a2          77 LGSGVIIDADKGYVVTNNHVVDN--ATVIKVQLSD-----------GRKFDAKMVGKDPR-------SDIALIQIQNPK-  135 (249)
T ss_dssp             EEEEEEEETTTTEEEEEHHHHTT--EEEEEEEETT-----------SCEEEEEEEEEETT-------TTEEEEEESSCC-
T ss_pred             cccEEEEeccCceEEeecccccc--ceeeeeeecc-----------cccccceeeEeccc-------hhhceeeecccc-
Confidence            456899985  489999999975  3345554431           13344444444433       599999997543 


Q ss_pred             cCCCeeeeecCCCCCCCCCCEEEEEecc
Q psy12777        497 FQPNIIPICVPEDDTNFVGTSAHVTGWG  524 (697)
Q Consensus       497 fs~~V~PICLP~~~~~~~G~~c~VtGWG  524 (697)
                         .+.++.|...+....|+.+++.|+-
T Consensus       136 ---~~~~~~l~~~~~~~~G~~v~aiG~P  160 (249)
T d1ky9a2         136 ---NLTAIKMADSDALRVGDYTVAIGNP  160 (249)
T ss_dssp             ---SCCCCCBCCGGGCCTTCEEEEEECT
T ss_pred             ---cceEEEcCCcCcCCcCCEEEEEecc
Confidence               3446666554444469999999973

>d2h5ca1 b.47.1.1 (A:15A-245) alpha-Lytic protease {Lysobacter enzymogenes, 495 [TaxId: 69]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: alpha-Lytic protease
species: Lysobacter enzymogenes, 495 [TaxId: 69]

Probab=93.72  E-value=0.11  Score=47.26  Aligned_cols=22  Identities=27%  Similarity=0.303  Sum_probs=15.7

Q ss_pred             eeee-EEEe---eCcceeeecccccC
Q psy12777        418 HKCG-AALF---NENWAVTAAHCVED  439 (697)
Q Consensus       418 ~~CG-GTLI---S~rwVLTAAHC~~~  439 (697)
                      ..|. |..+   +.+||||||||+..
T Consensus        15 ~~CS~Gf~v~~~~~~~ilTA~Hc~~~   40 (198)
T d2h5ca1          15 SLCSVGFSVTRGATKGFVTAGHCGTV   40 (198)
T ss_dssp             EEEECCEEEEETTEEEEEECGGGCCT
T ss_pred             CEEeeeEEEEECCCCEEEEChhcCCC
Confidence            4575 3333   56799999999964

>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Exfoliative toxin B
species: Staphylococcus aureus [TaxId: 1280]

Probab=92.57  E-value=0.023  Score=54.56  Aligned_cols=40  Identities=15%  Similarity=0.102  Sum_probs=29.8

Q ss_pred             CCcccceEEEeeeecccceeeeeeeEeeCcEEEeeccccccc
Q psy12777        571 FGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL  612 (697)
Q Consensus       571 ~g~~Pw~~~l~~~~~~~~~~~CgGslI~~~~VLSAAHC~~~~  612 (697)
                      ...+||.+-.+.+  ..+..+|.|.||++++|||||||+.+.
T Consensus        31 ~~~~p~~~v~~i~--~~g~~~GTGflI~~~~ILTa~HVv~~~   70 (246)
T d1qtfa_          31 NARSPYNSVGTVF--VKGSTLATGVLIGKNTIVTNYHVAREA   70 (246)
T ss_dssp             CSSTTGGGEEEEE--ETTTEEEEEEEEETTEEEECHHHHGGG
T ss_pred             cccCccccEEEEE--eCCCceEEEEEEeCCeEEEchhecccC
Confidence            5568887332221  235678999999999999999999764

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

Probab=91.68  E-value=0.021  Score=50.79  Aligned_cols=25  Identities=28%  Similarity=0.363  Sum_probs=19.2

Q ss_pred             ceeeee-eeEee---CcEEEeeccccccc
Q psy12777        588 YLHKCG-AALFN---ENWAVTAAHCVEDL  612 (697)
Q Consensus       588 ~~~~Cg-GslI~---~~~VLSAAHC~~~~  612 (697)
                      +.++|- |.++.   .+||||||||+.+.
T Consensus        10 ~~~~Ct~Gf~v~~~g~~~ilTAaHCv~~~   38 (187)
T d1hpga_          10 GGSRCSAAFNVTKGGARYFVTAGHCTNIS   38 (187)
T ss_dssp             TTEEEECCEEEEETTEEEEEECHHHHTTC
T ss_pred             CCCeEeeeEEEEcCCCcEEEEchhcCCCC
Confidence            456786 77764   56999999999863

>d2bhga1 b.47.1.4 (A:7-205) 3C cysteine protease (picornain 3C) {Foot-and-mouth disease virus FMDV [TaxId: 12110]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Viral cysteine protease of trypsin fold
domain: 3C cysteine protease (picornain 3C)
species: Foot-and-mouth disease virus FMDV [TaxId: 12110]

Probab=89.90  E-value=0.32  Score=44.31  Aligned_cols=95  Identities=13%  Similarity=0.036  Sum_probs=53.1

Q ss_pred             eeeeeEEEeeCcceeeecccccCCCCCceEEEEccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccc
Q psy12777        417 LHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK  496 (697)
Q Consensus       417 ~~~CGGTLIS~rwVLTAAHC~~~~~~~~l~V~LG~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~  496 (697)
                      ...|.|..|..+++|+.+|.+...   .-.+.++........    .........++     ......|||||+|.+...
T Consensus        22 ~~~g~gl~v~g~~~l~~~H~~~~~---~~~i~~~~~~~~~~~----~~~~~~~~~v~-----~~d~~~Dlall~l~~~~~   89 (199)
T d2bhga1          22 VAICCATGVFGTAYLVPRHLFAEK---YDKIMLDGRAMTDSD----YRVFEFEIKVK-----GQDMLSDAALMVLHRGNK   89 (199)
T ss_dssp             EEEEEEEEEEBTEEEEEHHHHTSC---CSEEEETTEEECGGG----EEEECCEECCS-----SSCEECSEEEEEESSSCC
T ss_pred             EEEeEEEEEECCEEEECCcEeecC---CCEEEEeeeEEEEEe----ccceEEEEEEE-----ecCCCccEEEEEcCCCCc
Confidence            457899999999999999988642   123333332221110    11111111111     123357999999987655


Q ss_pred             cCCCeeeeecCCCCCCCCCCEEEEEeccc
Q psy12777        497 FQPNIIPICVPEDDTNFVGTSAHVTGWGR  525 (697)
Q Consensus       497 fs~~V~PICLP~~~~~~~G~~c~VtGWG~  525 (697)
                      |.+....  +........+..+.+.||..
T Consensus        90 ~~~~~~~--~~~~~~~~~g~~v~~ig~p~  116 (199)
T d2bhga1          90 VRDITKH--FRDTARMKKGTPVVGVVNNA  116 (199)
T ss_dssp             BCCCGGG--BCSSCEECTTCEEEEEEEET
T ss_pred             CCccccc--ccccccccccceEEEEEcCC
Confidence            5444322  23333223588888888854

>d1lvmb_ b.47.1.3 (B:) TEV protease (nucleat inclusion protein A, NIA) {Tobacco etch virus, TEV [TaxId: 12227]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Viral proteases
domain: TEV protease (nucleat inclusion protein A, NIA)
species: Tobacco etch virus, TEV [TaxId: 12227]

Probab=85.40  E-value=0.79  Score=43.20  Aligned_cols=81  Identities=11%  Similarity=0.030  Sum_probs=43.7

Q ss_pred             EeeCcceeeecccccCCCCCceEEEE--ccccCCCCCCCCCcEEEEEEEEEECCCCCCCCCCCceEEEecCcccccCCCe
Q psy12777        424 LFNENWAVTAAHCVEDVPPSDLLLRL--GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNI  501 (697)
Q Consensus       424 LIS~rwVLTAAHC~~~~~~~~l~V~L--G~~dl~~~~~~~~~q~~~V~~IiiHP~Yn~~t~~nDIALLrL~~PV~fs~~V  501 (697)
                      ++...||||.||.+.+.+ ..+.|..  |.+...           .+..+.+++.     ...||||||+....  .+. 
T Consensus        33 i~~~~~IiTN~HVv~~~~-~~~~i~~~~G~~~~~-----------~~~~i~i~~~-----~~~DLaiik~~~~~--~p~-   92 (219)
T d1lvmb_          33 IGFGPFIITNKHLFRRNN-GTLLVQSLHGVFKVK-----------NTTTLQQHLI-----DGRDMIIIRMPKDF--PPF-   92 (219)
T ss_dssp             EEETTEEEECGGGGSCCS-EEEEEEETTEEEEES-----------CGGGSEEEEC-----TTSSCEEEECCTTS--CCC-
T ss_pred             EEeCCEEEECccccccCC-ceEEEEEcCCcEeec-----------ceEEEEeeec-----CCccEEEEEcCCCC--CCc-
Confidence            677889999999996522 2333332  111111           1111112211     23599999997643  122 


Q ss_pred             eeeecCCCCCCCCCCEEEEEecccc
Q psy12777        502 IPICVPEDDTNFVGTSAHVTGWGRL  526 (697)
Q Consensus       502 ~PICLP~~~~~~~G~~c~VtGWG~t  526 (697)
                        +.|-.......|+.+.+.|....
T Consensus        93 --~~l~~~~~~~~Ge~V~aiG~p~~  115 (219)
T d1lvmb_          93 --PQKLKFREPQREERICLVTTNFQ  115 (219)
T ss_dssp             --CSCCCBCCCCTTCEEEEEEECCS
T ss_pred             --ceecccCCCCcCCEEEEEEccCC
Confidence              23333233336999999998544