Psyllid ID: psy12833

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
Protein Sequence
MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALRMI
Secondary Structure (PSIPRED)
cccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccEEEEccccccccHHHHHHHHEEEEEHHHHHHHHHHHHHHHcccccccccEEEEEccHHHHHccccHHHHHHHHHHHHHHccHHHHHHccccccEEEEEccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccEEccccEEccHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccEEEEEEcccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEccHHHcccccccHHHHHHHcccccccEcHHHHHHHHHHHHHcccccccEEEEccccccc
Coil and Loop (DISEMBL)
MLKGVVGLVtggasglgKATVERIVREGgrvvlcdlptsegesvakelgpdvkfapvdvtseEDVQKAVLLCKDsfgkldvnvncagisCAFKIfnynkgtvhslddFKRILLVNTVGTFNVARLSAQLIHenklnedglrgVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARdlagagirvntiapglfdtpllSMLNEKVRNFLArsipapqrlghpdEFAQLVQSIItnplingeviridGALRMI
Flexible Loop (DISEMBL)
mlkgvvglvtggasglgkatVERIVREGGRVVlcdlptsegesvakelgpdvKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIhenklnedglRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSiitnplingeviridgalrmi
Low Complexity Region (SEG)
MLKGVVGLVTGGASGLGKATverivreggrvvLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALRMI
Disordered region (IsUnstruct)
****VVGLVTGGASGLGKATVERIVREGGRVVLCDLPT************DVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGA****
Disordered Region (DISOPRED)
**KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALRMI
Disordered Region (DISEMBL)
MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALRMI
Disordered Region (DISPRO)
*LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALRMI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALRMI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	254	2.2.26 [Sep-21-2011]
O18404	255	3-hydroxyacyl-CoA dehydro	yes	N/A	1.0	0.996	0.645	2e-94
O02691	261	3-hydroxyacyl-CoA dehydro	yes	N/A	0.992	0.965	0.623	8e-87
Q99714	261	3-hydroxyacyl-CoA dehydro	yes	N/A	0.992	0.965	0.634	2e-86
O70351	261	3-hydroxyacyl-CoA dehydro	yes	N/A	0.992	0.965	0.607	3e-85
O08756	261	3-hydroxyacyl-CoA dehydro	yes	N/A	0.992	0.965	0.607	2e-84
O06544	250	Uncharacterized oxidoredu	yes	N/A	0.956	0.972	0.527	4e-61
P66782	247	Uncharacterized oxidoredu	no	N/A	0.846	0.870	0.380	1e-30
P66781	247	Uncharacterized oxidoredu	no	N/A	0.846	0.870	0.380	1e-30
Q9X248	246	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.933	0.963	0.345	2e-30
Q9KQH7	244	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.940	0.979	0.304	8e-28

>sp|O18404|HCD2_DROME 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1

 Score =  345 bits (886), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 164/254 (64%), Positives = 203/254 (79%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           M+K  V LVTGGASGLG+AT ER+ ++G  V+L DLP+S+G  VAKELG  V F PVDVT
Sbjct: 1   MIKNAVSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKELGDKVVFVPVDVT 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SE+DV  A+   KD FG+LD+ VNCAG + A K FN+NK   H L+DF+R++ +NTVGTF
Sbjct: 61  SEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RLSA L+  N+ N+DG RGVI+NTAS+AA++GQ GQ AYSASK+ +VGMTLP+ARDL
Sbjct: 121 NVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIR+ TIAPGLF+TP+L+ L EKVR FLA+SIP PQRLG P E+A LVQ+I  NPL+
Sbjct: 181 STQGIRICTIAPGLFNTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENPLL 240

Query: 241 NGEVIRIDGALRMI 254
           NGEVIRIDGALRM+
Sbjct: 241 NGEVIRIDGALRMM 254

May function in mitochondrial tRNA maturation (By similarity). May play a role in germline formation.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 7EC: 8

>sp|O02691|HCD2_BOVIN 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Bos taurus GN=HSD17B10 PE=1 SV=3

 Score =  320 bits (819), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 157/252 (62%), Positives = 195/252 (77%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V L+TGGASGLG AT ER+V +G   VL DLP S+GE+ AK+LG    FAP DVTS
Sbjct: 8   VKGLVALITGGASGLGLATAERLVGQGATAVLLDLPNSDGETQAKKLGKSCAFAPADVTS 67

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+DVQ A+ L ++ FG++DV VNCAGI+ A K +N  K   H+L+DF+R++ VN +GTFN
Sbjct: 68  EKDVQAALTLAREKFGRVDVAVNCAGIAVASKTYNLKKSQAHTLEDFQRVINVNLIGTFN 127

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L +KVRNFLA  +P P RLG P E+A LVQ+II N  +N
Sbjct: 188 PMGIRVMTIAPGLFGTPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQAIIENSFLN 247

Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259

Functions in mitochondrial tRNA maturation. Part of mitochondrial ribonuclease P, an enzyme composed of MRPP1/RG9MTD1, MRPP2/HSD17B10 and MRPP3/KIAA0391, which cleaves tRNA molecules in their 5'-ends.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 8

>sp|Q99714|HCD2_HUMAN 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sapiens GN=HSD17B10 PE=1 SV=3

 Score =  318 bits (816), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 160/252 (63%), Positives = 195/252 (77%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG AT ER+V +G   VL DLP S GE+ AK+LG +  FAP DVTS
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 67

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+DVQ A+ L K  FG++DV VNCAGI+ A K +N  KG  H+L+DF+R+L VN +GTFN
Sbjct: 68  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 127

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L EKV NFLA  +P P RLG P E+A LVQ+II NP +N
Sbjct: 188 PIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 247

Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259

Functions in mitochondrial tRNA maturation. Part of mitochondrial ribonuclease P, an enzyme composed of MRPP1/RG9MTD1, MRPP2/HSD17B10 and MRPP3/KIAA0391, which cleaves tRNA molecules in their 5'-ends. By interacting with intracellular amyloid-beta, it may contribute to the neuronal dysfunction associated with Alzheimer disease (AD).

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 8

>sp|O70351|HCD2_RAT 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus GN=Hsd17b10 PE=1 SV=3

 Score =  315 bits (806), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 153/252 (60%), Positives = 198/252 (78%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG +T +R+V +G   VL D+P SEGE+ AK+LG +  FAP +VTS
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTS 67

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E++VQ A+ L K+ FG++DV VNCAGI+ A K ++  K  VH+L+DF+R++ VN +GTFN
Sbjct: 68  EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFN 127

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A ++ +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L +KVRNFLA  +P P RLG P E+A LVQ +I NP +N
Sbjct: 188 PIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQMVIENPFLN 247

Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259

Functions in mitochondrial tRNA maturation. Part of mitochondrial ribonuclease P, an enzyme composed of MRPP1/RG9MTD1, MRPP2/HSD17B10 and MRPP3/KIAA0391, which cleaves tRNA molecules in their 5'-ends.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 8

>sp|O08756|HCD2_MOUSE 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus GN=Hsd17b10 PE=1 SV=4

 Score =  311 bits (798), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 153/252 (60%), Positives = 194/252 (76%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V +VTGGASG   AT +R+V +G   VL D+P SEGES AK+LG    FAP +VTS
Sbjct: 8   VKGLVAVVTGGASGPWLATAKRLVGQGATAVLLDVPDSEGESQAKKLGESCIFAPANVTS 67

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+++Q A+ L K+ FG++DV VNCAGI+ A K ++  K  +H+L+DF+R++ VN +GTFN
Sbjct: 68  EKEIQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHQKKNKIHTLEDFQRVINVNLIGTFN 127

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GI GMTLP+ARDLA
Sbjct: 128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIDGMTLPIARDLA 187

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L EKVRNFLA  +P P RLG P E+A LVQ+II NP +N
Sbjct: 188 PTGIRVVTIAPGLFATPLLTTLPEKVRNFLASQVPFPSRLGDPAEYAHLVQTIIENPFLN 247

Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259

Functions in mitochondrial tRNA maturation. Part of mitochondrial ribonuclease P, an enzyme composed of MRPP1/RG9MTD1, MRPP2/HSD17B10 and MRPP3/KIAA0391, which cleaves tRNA molecules in their 5'-ends.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 8

>sp|O06544|Y1144_MYCTU Uncharacterized oxidoreductase Rv1144/MT1177 OS=Mycobacterium tuberculosis GN=Rv1144 PE=3 SV=1

 Score =  234 bits (598), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/252 (52%), Positives = 172/252 (68%), Gaps = 9/252 (3%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
           K  V +VTGGASGLG AT +R++  G +VV+ DL    G+ V   LG   +FA  DVT E
Sbjct: 4   KDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDL---RGDDVVGGLGDRARFAQADVTDE 60

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
             V  A+ L  DS G + V VNCAG   A ++ + +   V  L  F++I+ +N VGTFNV
Sbjct: 61  AAVSNALELA-DSLGPVRVVVNCAGTGNAIRVLSRDG--VFPLAAFRKIVDINLVGTFNV 117

Query: 123 ARLSAQLIHENK-LNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            RL A+ I + + + E+  RGVIINTAS+AA++GQ GQ AYSASK G+VGMTLP+ARDLA
Sbjct: 118 LRLGAERIAKTEPIGEE--RGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA 175

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
              IRV TIAPGLFDTPLL+ L  + +  L + +P P RLG+PDE+  LV  II NP++N
Sbjct: 176 SKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLN 235

Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 236 GEVIRLDGAIRM 247

Mycobacterium tuberculosis (taxid: 1773)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P66782|Y1385_MYCBO Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=fabG2 PE=3 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 127/234 (54%), Gaps = 19/234 (8%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG-PDVKFA-PVD 58
           +L     ++TGGA GLG A  +R V EG RVVL D+     E  AK LG  DV  A   D
Sbjct: 4   LLNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCD 63

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNT 116
           VT  +DV   +    + FG LDV VN AGI+           T+ ++  + F +++ V+ 
Sbjct: 64  VTQADDVDILIRTAVERFGGLDVMVNNAGIT--------RDATMRTMTEEQFDQVIAVHL 115

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            GT+N  RL+A ++ E K      RG I+N +S++   G  GQ  YSA+K+GIVGMT   
Sbjct: 116 KGTWNGTRLAAAIMRERK------RGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAA 169

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
           A++LA  GIRVN IAPGL  + +   + +++ +     +P   R G P E A +
Sbjct: 170 AKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMG-RAGEPSEVASV 222

Mycobacterium bovis (taxid: 1765)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P66781|Y1350_MYCTU Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 127/234 (54%), Gaps = 19/234 (8%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG-PDVKFA-PVD 58
           +L     ++TGGA GLG A  +R V EG RVVL D+     E  AK LG  DV  A   D
Sbjct: 4   LLNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCD 63

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNT 116
           VT  +DV   +    + FG LDV VN AGI+           T+ ++  + F +++ V+ 
Sbjct: 64  VTQADDVDILIRTAVERFGGLDVMVNNAGIT--------RDATMRTMTEEQFDQVIAVHL 115

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            GT+N  RL+A ++ E K      RG I+N +S++   G  GQ  YSA+K+GIVGMT   
Sbjct: 116 KGTWNGTRLAAAIMRERK------RGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAA 169

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
           A++LA  GIRVN IAPGL  + +   + +++ +     +P   R G P E A +
Sbjct: 170 AKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMG-RAGEPSEVASV 222

Mycobacterium tuberculosis (taxid: 1773)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9X248|FABG_THEMA 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=fabG PE=3 SV=1

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 137/255 (53%), Gaps = 18/255 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAP--VD 58
           L+G V L+TG ASG+GKAT     +EG  V+  D+     +S+ KE  G   K  P  ++
Sbjct: 3   LEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLN 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT  + +++ V      +G++DV VN AGI+    +    +      +D+  ++ VN  G
Sbjct: 63  VTDRDQIKEVVEKVVQKYGRIDVLVNNAGITRDALLVRMKE------EDWDAVINVNLKG 116

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            FNV ++    + + +       G I+N +S+    G  GQ  Y+ASK+G++GMT   A+
Sbjct: 117 VFNVTQMVVPYMIKQR------NGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAK 170

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN- 237
           +LAG  IRVN +APG  +TP+   L EK R      IP   R G P+E AQ++  + ++ 
Sbjct: 171 ELAGRNIRVNAVAPGFIETPMTEKLPEKARETALSRIPL-GRFGKPEEVAQVILFLASDE 229

Query: 238 -PLINGEVIRIDGAL 251
              + G+VI IDG L
Sbjct: 230 SSYVTGQVIGIDGGL 244

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q9KQH7|FABG_VIBCH 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabG PE=1 SV=2

 Score =  124 bits (310), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 135/256 (52%), Gaps = 17/256 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTG + G+GKA  E +   G +V+      S  ++++  LG + K   ++VT+
Sbjct: 3   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E ++  +    D FG +D+ VN AGI+    +    +      +++  I+  N    F 
Sbjct: 63  PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE------EEWSDIMETNLTSIFR 116

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +      +G IIN  S+    G +GQ  Y+A+K+G++G T  MAR++A
Sbjct: 117 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 170

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
             G+ VNT+APG  +T +   LN++ R      +PA  RLG P E A  V + + +P   
Sbjct: 171 SRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 228

Query: 239 LINGEVIRIDGALRMI 254
            I GE + ++G + MI
Sbjct: 229 YITGETLHVNGGMYMI 244

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
321478929	255	hypothetical protein DAPPUDRAFT_299789 [	0.996	0.992	0.679	2e-97
312379151	255	hypothetical protein AND_09073 [Anophele	1.0	0.996	0.669	1e-94
72006882	260	PREDICTED: 3-hydroxyacyl-CoA dehydrogena	0.992	0.969	0.674	2e-94
195447176	255	GK25326 [Drosophila willistoni] gi|19416	1.0	0.996	0.657	5e-94
194768110	255	GF19368 [Drosophila ananassae] gi|190623	1.0	0.996	0.653	1e-93
289739837	255	short-chain alcohol dehydrogenase/3-hydr	0.996	0.992	0.652	2e-93
21464392	255	RE18259p [Drosophila melanogaster]	1.0	0.996	0.649	2e-93
195132017	255	GI14682 [Drosophila mojavensis] gi|19390	1.0	0.996	0.649	3e-93
195396751	255	GJ16589 [Drosophila virilis] gi|19414675	1.0	0.996	0.649	4e-93
195048252	255	GH24783 [Drosophila grimshawi] gi|193893	1.0	0.996	0.653	5e-93

>gi|321478929|gb|EFX89885.1| hypothetical protein DAPPUDRAFT_299789 [Daphnia pulex]

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 172/253 (67%), Positives = 210/253 (83%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           MLKG V LVTGGASGLG+ATVERIVR+GGRVVLCDLPTS+G+ VA  +  +V FAP DV+
Sbjct: 1   MLKGAVALVTGGASGLGRATVERIVRQGGRVVLCDLPTSKGQQVAAGMSENVIFAPTDVS 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SE+DV  A+ + K+ FGKLDV VNCAGI  AFK +N+NK   H L+DF ++L+VNTVGTF
Sbjct: 61  SEKDVMNALSMTKEKFGKLDVAVNCAGIGVAFKTYNFNKNLPHKLEDFIKVLMVNTVGTF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RLSA L+ EN+ NEDG RGVI+NTAS+AAY+GQ GQ AYSASK  IVGMTLP+ARDL
Sbjct: 121 NVIRLSAGLMGENQPNEDGQRGVIVNTASVAAYDGQMGQAAYSASKGAIVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIRV TIAPGLF TPLL  L EKV+++LA+++P PQRLG PDE+A +V+SII NP++
Sbjct: 181 SSQGIRVCTIAPGLFKTPLLESLPEKVQSYLAKTVPFPQRLGKPDEYAMMVESIILNPMM 240

Query: 241 NGEVIRIDGALRM 253
           NGEV+R+DGA+RM
Sbjct: 241 NGEVVRVDGAIRM 253

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312379151|gb|EFR25520.1| hypothetical protein AND_09073 [Anopheles darlingi]

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 170/254 (66%), Positives = 206/254 (81%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           MLK  V LVTGGASGLG+ATVER  R G  V+LCDLPTS+G  VAKE+G +V + PVDV 
Sbjct: 1   MLKNAVALVTGGASGLGRATVERFARAGYNVLLCDLPTSKGNEVAKEIGDNVLYVPVDVL 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SE+DV  A+ L K  FG+LDV+VNCAGI+ A K +N+NK   H L+DF+R+LLVNT GTF
Sbjct: 61  SEKDVTGALDLAKSKFGRLDVSVNCAGIAVAVKTYNFNKKVAHKLEDFQRVLLVNTAGTF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RLSA L+ EN+ N DG RGVI+NTAS+AAY+GQ GQ AYSASK+ +VGMTLP+ARDL
Sbjct: 121 NVIRLSAGLMGENEPNVDGQRGVIVNTASVAAYDGQIGQAAYSASKAAVVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIR+ TIAPGLF+TP+L  L EKVR FLA++IP PQRLG P E+AQLVQ+I+ NPL+
Sbjct: 181 STQGIRIVTIAPGLFNTPMLQALPEKVRAFLAKTIPFPQRLGEPSEYAQLVQAIVDNPLL 240

Query: 241 NGEVIRIDGALRMI 254
           NGEVIR+DGALRM+
Sbjct: 241 NGEVIRLDGALRMM 254

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|72006882|ref|XP_780014.1| PREDICTED: 3-hydroxyacyl-CoA dehydrogenase type-2-like isoform 1 [Strongylocentrotus purpuratus]

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 170/252 (67%), Positives = 206/252 (81%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+VGLVTGGASGLGKATVER VR G R+V+ DLP S GE VAK LG D KF+P DVTS
Sbjct: 7   VKGLVGLVTGGASGLGKATVERFVRNGARMVIVDLPNSPGEEVAKSLGEDCKFSPGDVTS 66

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            +DV +A+ + KDSFG+LDV V+CAGI  A K +N+NK   H L++F+R+L+VNT GTFN
Sbjct: 67  ADDVTRAIDVAKDSFGRLDVAVSCAGIGVAVKTYNFNKDRPHPLEEFQRVLMVNTAGTFN 126

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +ARL+A  + +N+ N DG RG+IINTAS+AA++GQ GQ AYSASK  IVGMTLP+ARDLA
Sbjct: 127 LARLAAGAMGKNEPNVDGERGIIINTASVAAFDGQMGQAAYSASKGAIVGMTLPIARDLA 186

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLFDTPLL+ L EKVR FLARSIP P RL HPDE+A +V+SI+ NP++N
Sbjct: 187 SQGIRVCTIAPGLFDTPLLAGLPEKVRTFLARSIPFPSRLAHPDEYAHMVESIVQNPILN 246

Query: 242 GEVIRIDGALRM 253
           GEVIR+DGALRM
Sbjct: 247 GEVIRLDGALRM 258

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|195447176|ref|XP_002071098.1| GK25326 [Drosophila willistoni] gi|194167183|gb|EDW82084.1| GK25326 [Drosophila willistoni]

 Score =  350 bits (897), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 167/254 (65%), Positives = 206/254 (81%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           M+K VV LVTGGASGLG+ATVER+ ++G  VVL DLP+S+G  VAKELG  V F PVDV+
Sbjct: 1   MIKNVVSLVTGGASGLGRATVERLAKQGASVVLADLPSSQGNEVAKELGDKVVFVPVDVS 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SE+DV  AV   KD FG+LD+ VNCAG + A K +N+NK   H L+DF+R++ VNTVGTF
Sbjct: 61  SEKDVTAAVQTAKDKFGRLDLTVNCAGTATAVKTYNFNKNVAHRLEDFQRVINVNTVGTF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RLSA L+  N+ N+DG RGVI+NTAS+AA++GQ GQ AYSASK+ +VGMTLP+ARDL
Sbjct: 121 NVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIR+ TIAPGLF+TP+L+ L EKVR FLA+SIP PQRLG P E+AQLVQ+I  NPL+
Sbjct: 181 STQGIRICTIAPGLFNTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAQLVQAIYENPLL 240

Query: 241 NGEVIRIDGALRMI 254
           NGEVIR+DGALRM+
Sbjct: 241 NGEVIRLDGALRMM 254

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194768110|ref|XP_001966156.1| GF19368 [Drosophila ananassae] gi|190623041|gb|EDV38565.1| GF19368 [Drosophila ananassae]

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 166/254 (65%), Positives = 205/254 (80%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           MLK VV LVTGGASGLG+AT ER+ ++G  VVL DLP+S+G  VAKELG  V F P+DVT
Sbjct: 1   MLKNVVSLVTGGASGLGRATAERLAKQGASVVLADLPSSKGNDVAKELGDKVVFVPLDVT 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SE+DV  AV   KD FG+LD+ VNCAG + A K +N+NK   H L+DF+R++ +NTVGTF
Sbjct: 61  SEKDVTAAVQTAKDKFGRLDLTVNCAGTATAVKTYNFNKNVAHKLEDFQRVININTVGTF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RLSA L+  N+ N+DG RGVI+NTAS+AA++GQ GQ AYSASK+ +VGMTLP+ARDL
Sbjct: 121 NVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIR+ TIAPGLF+TP+L+ L EKVR FLA+SIP PQRLG P E+AQLVQ+I  NPL+
Sbjct: 181 STQGIRICTIAPGLFNTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAQLVQAIYENPLL 240

Query: 241 NGEVIRIDGALRMI 254
           NGEVIR+DGALRM+
Sbjct: 241 NGEVIRLDGALRMM 254

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289739837|gb|ADD18666.1| short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Glossina morsitans morsitans]

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/253 (65%), Positives = 205/253 (81%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           M+K  V LVTGGASGLG+ATVER+ ++G RVVL DL TS+G+  AKELG +V F PVDVT
Sbjct: 1   MIKNAVSLVTGGASGLGRATVERLAKQGARVVLADLGTSKGQEAAKELGDNVVFVPVDVT 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SE+DV  A+   KD FG+LD+ VNCAG + A + +N+NK T H L+DF R++++NTVGTF
Sbjct: 61  SEKDVTNAMQTAKDKFGRLDLAVNCAGTAAAVRTYNFNKSTAHRLEDFTRVIMINTVGTF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RL+A L+  N+ N+DG RGVIINTAS+AA++GQ GQ AYSASK+G+VGMTLP+ARDL
Sbjct: 121 NVIRLAAGLMGTNEPNQDGQRGVIINTASVAAFDGQIGQAAYSASKAGVVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIR+ TIAPGLF+TP+L+ L EKVR FLA+SIP PQRLG P E+A LVQ+I  NPL+
Sbjct: 181 STQGIRICTIAPGLFNTPMLASLPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENPLM 240

Query: 241 NGEVIRIDGALRM 253
           NGE IRIDGALRM
Sbjct: 241 NGETIRIDGALRM 253

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|21464392|gb|AAM51999.1| RE18259p [Drosophila melanogaster]

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/254 (64%), Positives = 203/254 (79%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           M+K  V LVTGGASGLG+AT ER+ ++G  V+L DLP+S+G  VAKELG  V F PVDVT
Sbjct: 1   MIKNAVSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKELGDKVVFVPVDVT 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SE+DV  A+   KD FG+LD+ VNCAG + A K FN+NK   H L+DF+R++ +NTVGTF
Sbjct: 61  SEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RLSA L+  NK N+DG RGVI+NTAS+AA++GQ GQ AYSASK+ +VGMTLP+ARDL
Sbjct: 121 NVIRLSAGLMGANKPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIR+ TIAPGLF+TP+L+ L EKVR FLA+SIP PQRLG P E+A LVQ+I  NPL+
Sbjct: 181 STQGIRICTIAPGLFNTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENPLL 240

Query: 241 NGEVIRIDGALRMI 254
           NGEVIRIDGALRM+
Sbjct: 241 NGEVIRIDGALRMM 254

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195132017|ref|XP_002010440.1| GI14682 [Drosophila mojavensis] gi|193908890|gb|EDW07757.1| GI14682 [Drosophila mojavensis]

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 165/254 (64%), Positives = 204/254 (80%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           M+K VV LVTGGASGLG+AT ER+ ++G  VVL DLP+S+G  VAKELG  V F PVDVT
Sbjct: 1   MIKNVVSLVTGGASGLGRATAERLAKQGASVVLADLPSSKGTEVAKELGDKVVFVPVDVT 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SE+DV  A+   KD FG+LD+ VNCAG + A K +N+NK   H L+DF+R++ +NTVGTF
Sbjct: 61  SEQDVSAALQTAKDKFGRLDLTVNCAGTATAVKTYNFNKNVAHRLEDFQRVININTVGTF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RLSA L+  N  N+DG RGVI+NTAS+AA++GQ GQ AYSASK+ +VGMTLP+ARDL
Sbjct: 121 NVIRLSAGLMGANAPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIR+ TIAPGLF+TP+L+ L EKVR FLA+SIP PQRLG P E+AQLVQ+I  NPL+
Sbjct: 181 STQGIRICTIAPGLFNTPMLAALPEKVRTFLAKSIPFPQRLGDPSEYAQLVQAIYENPLL 240

Query: 241 NGEVIRIDGALRMI 254
           NGEVIR+DGALRM+
Sbjct: 241 NGEVIRLDGALRMM 254

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195396751|ref|XP_002056992.1| GJ16589 [Drosophila virilis] gi|194146759|gb|EDW62478.1| GJ16589 [Drosophila virilis]

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 165/254 (64%), Positives = 203/254 (79%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           MLK VV LVTGGASGLG+AT ER+ ++G  VVL DLP+S+G  VAKELG  V F PVDVT
Sbjct: 1   MLKNVVSLVTGGASGLGRATAERLAKQGASVVLADLPSSKGNDVAKELGDKVVFVPVDVT 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SE+DV  A+   KD FG+LD+ VNCAG + A K +N+NK   H L+DF+R++ +NTVGTF
Sbjct: 61  SEQDVSAALQTAKDKFGRLDLTVNCAGTATAVKTYNFNKNVAHKLEDFQRVININTVGTF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RLSA L+  N  N+DG RGVI+NTAS+AA++GQ GQ AYSASK+ +VGMTLP+ARDL
Sbjct: 121 NVIRLSAGLMGSNAPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIR+ TIAPGLF+TP+L+ L EKVR FLA+SIP PQRLG P E+A LVQ+I  NPL+
Sbjct: 181 STQGIRICTIAPGLFNTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENPLL 240

Query: 241 NGEVIRIDGALRMI 254
           NGEVIR+DGALRM+
Sbjct: 241 NGEVIRLDGALRMM 254

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195048252|ref|XP_001992497.1| GH24783 [Drosophila grimshawi] gi|193893338|gb|EDV92204.1| GH24783 [Drosophila grimshawi]

 Score =  346 bits (888), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 166/254 (65%), Positives = 206/254 (81%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           MLK VV LVTGGASGLG+ATVER+ ++G  VVL DLP+S+G  VAKELG +V FAPV+VT
Sbjct: 1   MLKNVVSLVTGGASGLGRATVERLAKQGASVVLADLPSSKGNDVAKELGDNVVFAPVNVT 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           SEEDV  A+ L K  FG+LD+ VNCAG + A K +N+NK   H L+DF+R++ VNTVG+F
Sbjct: 61  SEEDVTAALELAKQKFGRLDLTVNCAGTATAVKTYNFNKNVAHKLEDFQRVINVNTVGSF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV RLSA L+  N  N+DG RGVI+NTAS+AA++GQ GQ AYSASK+ +VGMTLP+ARDL
Sbjct: 121 NVIRLSAGLMGANAPNKDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           +  GIR+ TIAPGLF+TP+L+ L +KVR FLA+SIP PQRLG P E+A LVQ+I  NPL+
Sbjct: 181 STQGIRICTIAPGLFNTPMLAALPDKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENPLL 240

Query: 241 NGEVIRIDGALRMI 254
           NGEVIR+DGALRM+
Sbjct: 241 NGEVIRLDGALRMM 254

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
FB|FBgn0021765	255	scu "scully" [Drosophila melan	1.0	0.996	0.629	1.2e-81
UNIPROTKB|E2R9F5	261	HSD17B10 "Uncharacterized prot	0.992	0.965	0.623	9e-77
UNIPROTKB|O02691	261	HSD17B10 "3-hydroxyacyl-CoA de	0.992	0.965	0.603	1e-75
UNIPROTKB|Q99714	261	HSD17B10 "3-hydroxyacyl-CoA de	0.992	0.965	0.615	1e-75
UNIPROTKB|F1RUI1	261	LOC100524293 "Uncharacterized	0.992	0.965	0.607	4.5e-75
RGD|69231	261	Hsd17b10 "hydroxysteroid (17-b	0.992	0.965	0.591	4.5e-75
UNIPROTKB|K7GP28	293	LOC100524293 "Uncharacterized	0.988	0.856	0.609	5.7e-75
ZFIN|ZDB-GENE-041010-201	260	hsd17b10 "hydroxysteroid (17-b	0.992	0.969	0.603	5.7e-75
MGI|MGI:1333871	261	Hsd17b10 "hydroxysteroid (17-b	0.992	0.965	0.591	1.4e-73
UNIPROTKB|K7GLL2	252	LOC100524293 "Uncharacterized	0.956	0.964	0.575	1.7e-68

FB|FBgn0021765 scu "scully" [Drosophila melanogaster (taxid:7227)]

 Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
 Identities = 160/254 (62%), Positives = 195/254 (76%)

Query:     1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVT 60
             M+K  V LVTGGASGLG+AT            L DLP+S+G  VAKELG  V F PVDVT
Sbjct:     1 MIKNAVSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKELGDKVVFVPVDVT 60

Query:    61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
             SE+DV  A+   KD FG+LD+ VNCAG + A K FN+NK   H L+DF+R++ +NTVGTF
Sbjct:    61 SEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTF 120

Query:   121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
             NV RLSA L+  N+ N+DG RGVI+NTAS+AA++GQ GQ AYSASK+ +VGMTLP+ARDL
Sbjct:   121 NVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDL 180

Query:   181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
             +  GIR+ TIAPGLF+TP+L+ L EKVR FLA+SIP PQRLG P E+A LVQ+I  NPL+
Sbjct:   181 STQGIRICTIAPGLFNTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENPLL 240

Query:   241 NGEVIRIDGALRMI 254
             NGEVIRIDGALRM+
Sbjct:   241 NGEVIRIDGALRMM 254

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS;NAS

GO:0005739 "mitochondrion" evidence=NAS

GO:0050327 "testosterone 17-beta-dehydrogenase (NAD+) activity" evidence=IDA

GO:0006637 "acyl-CoA metabolic process" evidence=IDA

GO:0016229 "steroid dehydrogenase activity" evidence=IDA

GO:0008210 "estrogen metabolic process" evidence=IDA

GO:0004303 "estradiol 17-beta-dehydrogenase activity" evidence=IDA

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0006631 "fatty acid metabolic process" evidence=IDA

GO:0047022 "7-beta-hydroxysteroid dehydrogenase (NADP+) activity" evidence=IDA

GO:0018454 "acetoacetyl-CoA reductase activity" evidence=IDA

GO:0008205 "ecdysone metabolic process" evidence=IDA

GO:0005829 "cytosol" evidence=NAS

GO:0047035 "testosterone dehydrogenase (NAD+) activity" evidence=IDA

GO:0008209 "androgen metabolic process" evidence=IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

GO:0005875 "microtubule associated complex" evidence=IDA

UNIPROTKB|E2R9F5 HSD17B10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
 Identities = 157/252 (62%), Positives = 188/252 (74%)

Query:     2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             +KG+V LVTGGASGLG AT            L DLP S+GE  AK+LG +  FA  DVTS
Sbjct:     8 VKGLVALVTGGASGLGLATAERLVGQGATAVLLDLPNSDGEVQAKKLGKNCTFAAADVTS 67

Query:    62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             E+DVQ A+ L K+ FG++DV VNCAGI+ A K +N  K   H+L+DF+R+L VN +GTFN
Sbjct:    68 EKDVQAALTLAKEKFGRVDVAVNCAGIAVAIKTYNLKKNQAHTLEDFQRVLNVNLLGTFN 127

Query:   122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct:   128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187

Query:   182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
               GIRV TIAPGLF TPLL+ L EKVRNFLA  +P P RLG P E+A LVQ+II NP IN
Sbjct:   188 PVGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVPFPNRLGDPAEYAHLVQAIIENPFIN 247

Query:   242 GEVIRIDGALRM 253
             GEVIR+DGA+RM
Sbjct:   248 GEVIRLDGAIRM 259

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|O02691 HSD17B10 "3-hydroxyacyl-CoA dehydrogenase type-2" [Bos taurus (taxid:9913)]

 Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
 Identities = 152/252 (60%), Positives = 188/252 (74%)

Query:     2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             +KG+V L+TGGASGLG AT            L DLP S+GE+ AK+LG    FAP DVTS
Sbjct:     8 VKGLVALITGGASGLGLATAERLVGQGATAVLLDLPNSDGETQAKKLGKSCAFAPADVTS 67

Query:    62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             E+DVQ A+ L ++ FG++DV VNCAGI+ A K +N  K   H+L+DF+R++ VN +GTFN
Sbjct:    68 EKDVQAALTLAREKFGRVDVAVNCAGIAVASKTYNLKKSQAHTLEDFQRVINVNLIGTFN 127

Query:   122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct:   128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187

Query:   182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
               GIRV TIAPGLF TPLL+ L +KVRNFLA  +P P RLG P E+A LVQ+II N  +N
Sbjct:   188 PMGIRVMTIAPGLFGTPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQAIIENSFLN 247

Query:   242 GEVIRIDGALRM 253
             GEVIR+DGA+RM
Sbjct:   248 GEVIRLDGAIRM 259

GO:0005739 "mitochondrion" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0047015 "3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity" evidence=IEA

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA

GO:0008033 "tRNA processing" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q99714 HSD17B10 "3-hydroxyacyl-CoA dehydrogenase type-2" [Homo sapiens (taxid:9606)]

 Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
 Identities = 155/252 (61%), Positives = 188/252 (74%)

Query:     2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             +KG+V ++TGGASGLG AT            L DLP S GE+ AK+LG +  FAP DVTS
Sbjct:     8 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 67

Query:    62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             E+DVQ A+ L K  FG++DV VNCAGI+ A K +N  KG  H+L+DF+R+L VN +GTFN
Sbjct:    68 EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 127

Query:   122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct:   128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187

Query:   182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
               GIRV TIAPGLF TPLL+ L EKV NFLA  +P P RLG P E+A LVQ+II NP +N
Sbjct:   188 PIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 247

Query:   242 GEVIRIDGALRM 253
             GEVIR+DGA+RM
Sbjct:   248 GEVIRLDGAIRM 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008033 "tRNA processing" evidence=IEA

GO:0047015 "3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISS

GO:0006629 "lipid metabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0008709 "cholate 7-alpha-dehydrogenase activity" evidence=TAS

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=EXP

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0009083 "branched-chain amino acid catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1RUI1 LOC100524293 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
 Identities = 153/252 (60%), Positives = 184/252 (73%)

Query:     2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             +KG+V ++TGGASGLG AT            L DLP S+GE+ AK+LG    FAP DVTS
Sbjct:     8 VKGLVAIITGGASGLGLATAERLVGQGASAVLLDLPHSDGEAQAKKLGKSCAFAPADVTS 67

Query:    62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             E+DVQ A+ L K+ FG++DV VNCAGI  A K +N  K   H+L+DF+R+L VN  GTFN
Sbjct:    68 EKDVQAALTLAKEKFGRVDVAVNCAGIGVASKTYNLKKSQAHTLEDFQRVLNVNLTGTFN 127

Query:   122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             V RL A  + +N+ ++ G RGVIINTASIAA+EGQ GQ AYSASK GIV MTLP+ARDLA
Sbjct:   128 VIRLVAGEMGQNEPDQGGQRGVIINTASIAAFEGQVGQAAYSASKGGIVSMTLPIARDLA 187

Query:   182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
               GIRV TIAPGLF TPLL+ L +KVRNFLA  +P P RLG P E+A L Q II NP +N
Sbjct:   188 PMGIRVMTIAPGLFGTPLLNTLPDKVRNFLANQVPFPSRLGDPAEYAHLAQVIIENPFLN 247

Query:   242 GEVIRIDGALRM 253
             GEVIR+DGA+RM
Sbjct:   248 GEVIRLDGAIRM 259

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|69231 Hsd17b10 "hydroxysteroid (17-beta) dehydrogenase 10" [Rattus norvegicus (taxid:10116)]

 Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
 Identities = 149/252 (59%), Positives = 191/252 (75%)

Query:     2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             +KG+V ++TGGASGLG +T            L D+P SEGE+ AK+LG +  FAP +VTS
Sbjct:     8 VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTS 67

Query:    62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             E++VQ A+ L K+ FG++DV VNCAGI+ A K ++  K  VH+L+DF+R++ VN +GTFN
Sbjct:    68 EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFN 127

Query:   122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             V RL A ++ +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct:   128 VIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187

Query:   182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
               GIRV TIAPGLF TPLL+ L +KVRNFLA  +P P RLG P E+A LVQ +I NP +N
Sbjct:   188 PIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQMVIENPFLN 247

Query:   242 GEVIRIDGALRM 253
             GEVIR+DGA+RM
Sbjct:   248 GEVIRLDGAIRM 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001540 "beta-amyloid binding" evidence=IDA

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA;ISO

GO:0004303 "estradiol 17-beta-dehydrogenase activity" evidence=IDA

GO:0005496 "steroid binding" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO;ISS;IDA

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0007569 "cell aging" evidence=IEP

GO:0008033 "tRNA processing" evidence=IEA

GO:0018454 "acetoacetyl-CoA reductase activity" evidence=IDA

GO:0030331 "estrogen receptor binding" evidence=IPI

GO:0033327 "Leydig cell differentiation" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0047015 "3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity" evidence=IEA

GO:0051287 "NAD binding" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=IDA

UNIPROTKB|K7GP28 LOC100524293 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
 Identities = 153/251 (60%), Positives = 183/251 (72%)

Query:     3 KGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
             KG+V ++TGGASGLG AT            L DLP S+GE+ AK+LG    FAP DVTSE
Sbjct:    41 KGLVAIITGGASGLGLATAERLVGQGASAVLLDLPHSDGEAQAKKLGKSCAFAPADVTSE 100

Query:    63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
             +DVQ A+ L K+ FG++DV VNCAGI  A K +N  K   H+L+DF+R+L VN  GTFNV
Sbjct:   101 KDVQAALTLAKEKFGRVDVAVNCAGIGVASKTYNLKKSQAHTLEDFQRVLNVNLTGTFNV 160

Query:   123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
              RL A  + +N+ ++ G RGVIINTASIAA+EGQ GQ AYSASK GIV MTLP+ARDLA 
Sbjct:   161 IRLVAGEMGQNEPDQGGQRGVIINTASIAAFEGQVGQAAYSASKGGIVSMTLPIARDLAP 220

Query:   183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLING 242
              GIRV TIAPGLF TPLL+ L +KVRNFLA  +P P RLG P E+A L Q II NP +NG
Sbjct:   221 MGIRVMTIAPGLFGTPLLNTLPDKVRNFLANQVPFPSRLGDPAEYAHLAQVIIENPFLNG 280

Query:   243 EVIRIDGALRM 253
             EVIR+DGA+RM
Sbjct:   281 EVIRLDGAIRM 291

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-041010-201 hsd17b10 "hydroxysteroid (17-beta) dehydrogenase 10" [Danio rerio (taxid:7955)]

 Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
 Identities = 152/252 (60%), Positives = 186/252 (73%)

Query:     2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             +KG+VGLVTGGASGLG+AT            + DLP+S+G  VA  LG    FAP DVTS
Sbjct:     7 VKGMVGLVTGGASGLGRATVERLIKHGASAVILDLPSSDGHKVAAALGDRCAFAPTDVTS 66

Query:    62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             E DV+ A+ L K+ +GK+D+ VNCAGI+ A K +N+ K   HSL+DF R++ VN  GTFN
Sbjct:    67 ESDVRSALDLAKEKYGKVDLAVNCAGIAVAVKTYNFKKDLPHSLEDFTRVITVNIAGTFN 126

Query:   122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             V RL+   + +N+ + DG RG I+NTAS+AAY+GQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct:   127 VIRLAVGEMGKNEPDADGHRGCIVNTASVAAYDGQVGQAAYSASKGGIVGMTLPIARDLA 186

Query:   182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
               GIRV TIAPGLF TPLL+ L EKV++FLAR +P P RLG P EFA LV SI  NP+IN
Sbjct:   187 PMGIRVVTIAPGLFATPLLAGLPEKVQSFLARQVPFPSRLGDPAEFAHLVTSIAENPMIN 246

Query:   242 GEVIRIDGALRM 253
             GEVIR+DGA+RM
Sbjct:   247 GEVIRLDGAIRM 258

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:1333871 Hsd17b10 "hydroxysteroid (17-beta) dehydrogenase 10" [Mus musculus (taxid:10090)]

 Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
 Identities = 149/252 (59%), Positives = 187/252 (74%)

Query:     2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             +KG+V +VTGGASG   AT            L D+P SEGES AK+LG    FAP +VTS
Sbjct:     8 VKGLVAVVTGGASGPWLATAKRLVGQGATAVLLDVPDSEGESQAKKLGESCIFAPANVTS 67

Query:    62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             E+++Q A+ L K+ FG++DV VNCAGI+ A K ++  K  +H+L+DF+R++ VN +GTFN
Sbjct:    68 EKEIQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHQKKNKIHTLEDFQRVINVNLIGTFN 127

Query:   122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GI GMTLP+ARDLA
Sbjct:   128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIDGMTLPIARDLA 187

Query:   182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
               GIRV TIAPGLF TPLL+ L EKVRNFLA  +P P RLG P E+A LVQ+II NP +N
Sbjct:   188 PTGIRVVTIAPGLFATPLLTTLPEKVRNFLASQVPFPSRLGDPAEYAHLVQTIIENPFLN 247

Query:   242 GEVIRIDGALRM 253
             GEVIR+DGA+RM
Sbjct:   248 GEVIRLDGAIRM 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001540 "beta-amyloid binding" evidence=ISO

GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA

GO:0004303 "estradiol 17-beta-dehydrogenase activity" evidence=ISO

GO:0005496 "steroid binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0008033 "tRNA processing" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0018454 "acetoacetyl-CoA reductase activity" evidence=ISO

GO:0030331 "estrogen receptor binding" evidence=ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0047015 "3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity" evidence=IEA

GO:0051287 "NAD binding" evidence=ISO

GO:0051289 "protein homotetramerization" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|K7GLL2 LOC100524293 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
 Identities = 145/252 (57%), Positives = 176/252 (69%)

Query:     2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             +KG+V ++TGGASGLG AT            L DLP S+GE+ AK+LG    FAP DVTS
Sbjct:     8 VKGLVAIITGGASGLGLATAERLVGQGASAVLLDLPHSDGEAQAKKLGKSCAFAPADVTS 67

Query:    62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             E+DVQ A+ L K+ FG++DV VNCAGI  A K +N  K   H+L+DF+R+L VN  GTFN
Sbjct:    68 EKDVQAALTLAKEKFGRVDVAVNCAGIGVASKTYNLKKSQAHTLEDFQRVLNVNLTGTFN 127

Query:   122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             V RL A  + +N+ ++ G RGVIINTASIAA+EGQ GQ AYSASK GIV MTLP+ARDLA
Sbjct:   128 VIRLVAGEMGQNEPDQGGQRGVIINTASIAAFEGQVGQAAYSASKGGIVSMTLPIARDLA 187

Query:   182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
               G         LF TPLL+ L +KVRNFLA  +P P RLG P E+A L Q II NP +N
Sbjct:   188 PMG---------LFGTPLLNTLPDKVRNFLANQVPFPSRLGDPAEYAHLAQVIIENPFLN 238

Query:   242 GEVIRIDGALRM 253
             GEVIR+DGA+RM
Sbjct:   239 GEVIRLDGAIRM 250

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.3125	0.9330	0.9556	yes	N/A
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3450	0.9330	0.9634	yes	N/A
Q8KWS9	BACC_BACAM	1, ., -, ., -, ., -	0.3294	0.8976	0.8976	yes	N/A
Q9Z8P2	FABG_CHLPN	1, ., 1, ., 1, ., 1, 0, 0	0.3132	0.9094	0.9314	yes	N/A
O18404	HCD2_DROME	1, ., 1, ., 1, ., 1, 7, 8	0.6456	1.0	0.9960	yes	N/A
Q2FVD5	Y2778_STAA8	1, ., -, ., -, ., -	0.2970	0.8464	0.9307	yes	N/A
O02691	HCD2_BOVIN	1, ., 1, ., 1, ., 1, 7, 8	0.6230	0.9921	0.9655	yes	N/A
P55336	FABG_VIBHA	1, ., 1, ., 1, ., 1, 0, 0	0.3023	0.9330	0.9713	yes	N/A
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.3046	0.9409	0.9795	yes	N/A
Q5HLD8	Y2049_STAEQ	1, ., -, ., -, ., -	0.3131	0.7322	0.8086	yes	N/A
O70351	HCD2_RAT	1, ., 1, ., 1, ., 1, 7, 8	0.6071	0.9921	0.9655	yes	N/A
Q5HD73	Y2488_STAAC	1, ., -, ., -, ., -	0.2970	0.8464	0.9307	yes	N/A
P0A2C9	FABG_SALTY	1, ., 1, ., 1, ., 1, 0, 0	0.2627	0.9448	0.9836	yes	N/A
O06544	Y1144_MYCTU	1, ., -, ., -, ., -	0.5277	0.9566	0.972	yes	N/A
Q8CN40	Y2036_STAES	1, ., -, ., -, ., -	0.3131	0.7322	0.8086	yes	N/A
Q99714	HCD2_HUMAN	1, ., 1, ., 1, ., 1, 7, 8	0.6349	0.9921	0.9655	yes	N/A
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.28	0.9094	0.9314	yes	N/A
O08756	HCD2_MOUSE	1, ., 1, ., 1, ., 1, 7, 8	0.6071	0.9921	0.9655	yes	N/A
P39640	BACC_BACSU	1, ., -, ., -, ., -	0.3399	0.9015	0.9051	yes	N/A
Q8NUV9	Y2403_STAAW	1, ., -, ., -, ., -	0.2887	0.8464	0.9307	yes	N/A
Q99RF5	Y2478_STAAM	1, ., -, ., -, ., -	0.2928	0.8464	0.9307	yes	N/A
Q7A3L9	Y2266_STAAN	1, ., -, ., -, ., -	0.2928	0.8464	0.9307	yes	N/A
Q6GDV6	Y2567_STAAR	1, ., -, ., -, ., -	0.2928	0.8464	0.9307	yes	N/A
Q6G6J1	Y2370_STAAS	1, ., -, ., -, ., -	0.2887	0.8464	0.9307	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.178	0.991
3rd Layer	1.1.1.35	0.991
4th Layer	1.1.1.69	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	254
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-137
cd05233	234	cd05233, SDR_c, classical (c) SDRs	9e-58
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-55
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-54
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	3e-52
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-49
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-48
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	9e-47
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-46
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-46
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-46
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	4e-42
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	7e-42
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	9e-41
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-39
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-39
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	6e-38
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	7e-38
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-37
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-37
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-37
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-37
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	6e-37
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	6e-37
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	6e-37
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-36
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-36
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-35
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	4e-35
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	5e-35
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	7e-35
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-34
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-34
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-34
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-34
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-34
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-34
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-34
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-33
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-33
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-33
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-33
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-33
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	6e-32
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	7e-32
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	8e-32
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	9e-32
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-31
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-31
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-31
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-31
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	4e-31
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	4e-31
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	9e-31
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-30
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	4e-30
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	4e-30
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	4e-30
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-29
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	5e-29
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-28
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-28
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-28
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	5e-28
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	8e-28
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-27
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-27
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-27
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-27
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-27
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-27
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-27
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-27
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-27
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	4e-27
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	4e-27
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	4e-27
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	4e-27
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	2e-26
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	3e-26
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	5e-26
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	7e-26
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	7e-26
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	8e-26
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	8e-26
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	9e-26
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-25
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-25
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-25
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-25
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	3e-25
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	5e-25
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	8e-25
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	8e-25
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-25
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-24
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-24
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-24
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-24
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-24
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	5e-24
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	8e-24
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	9e-24
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	1e-23
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-23
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-23
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-23
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-23
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	4e-23
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	6e-23
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	7e-23
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	1e-22
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-22
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-22
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-22
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-22
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-22
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-22
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-22
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-22
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	4e-22
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	4e-22
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	4e-22
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-21
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	2e-21
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-21
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-21
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	3e-21
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-21
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	4e-21
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-21
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-20
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-20
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-20
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-20
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-20
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	5e-20
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	5e-20
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	5e-20
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-20
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	7e-20
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	7e-20
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	7e-20
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	8e-20
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-19
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-19
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-19
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-19
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	3e-19
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	3e-19
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	8e-19
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-18
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-18
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-18
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	7e-18
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-17
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-17
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	1e-17
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-17
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-17
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	2e-17
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-17
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-17
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	6e-17
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-16
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-16
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-16
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-16
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	6e-16
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	7e-16
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-16
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-15
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-15
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-15
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-15
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	3e-15
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	4e-15
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	6e-15
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	6e-15
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	9e-15
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	1e-14
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-14
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-14
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	5e-14
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	5e-14
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	5e-14
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-14
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-13
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-13
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-13
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	4e-13
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	5e-13
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	7e-13
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-12
pfam08659	181	pfam08659, KR, KR domain	3e-12
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	4e-12
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	6e-12
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-11
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-11
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-11
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-11
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-11
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	5e-11
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	6e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	7e-11
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	8e-11
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	8e-11
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	3e-10
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	5e-10
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	5e-10
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	8e-10
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-09
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-09
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-09
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	6e-09
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	1e-08
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-08
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-08
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	3e-08
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	5e-08
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	6e-08
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	6e-08
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	7e-08
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	9e-08
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-07
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	4e-07
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	7e-07
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	7e-07
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	1e-06
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	1e-06
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	1e-06
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	2e-06
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	4e-06
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	6e-06
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	7e-06
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	9e-06
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-05
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-05
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	5e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	6e-05
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	7e-05
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	8e-05
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	9e-05
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	2e-04
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-04
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	3e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	3e-04
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	4e-04
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	0.002
PRK07904	253	PRK07904, PRK07904, short chain dehydrogenase; Pro	0.002
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	0.003
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	0.003
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	0.004

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  384 bits (989), Expect = e-137
 Identities = 159/251 (63%), Positives = 198/251 (78%), Gaps = 1/251 (0%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
           KG+V +VTGGASGLG ATVER++ +G +VV+ DLP S GE+VAK LG + +F PVDVTSE
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAK-LGDNCRFVPVDVTSE 59

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           +DV+ A+ L K  FG+LD+ VNCAGI+ A K +N      HSL+ F+R++ VN +GTFNV
Sbjct: 60  KDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFNV 119

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            RL+A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA 
Sbjct: 120 IRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLAP 179

Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLING 242
            GIRV TIAPGLFDTPLL+ L EKVR+FLA+ +P P RLG P E+A LVQ II NP +NG
Sbjct: 180 QGIRVVTIAPGLFDTPLLAGLPEKVRDFLAKQVPFPSRLGDPAEYAHLVQHIIENPYLNG 239

Query: 243 EVIRIDGALRM 253
           EVIR+DGA+RM
Sbjct: 240 EVIRLDGAIRM 250

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  183 bits (466), Expect = 9e-58
 Identities = 86/245 (35%), Positives = 130/245 (53%), Gaps = 16/245 (6%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA--KELGPDVKFAPVDVTSEEDV 65
           LVTG +SG+G+A   R+ REG +VVL D        +A  + LG +      DV+ EEDV
Sbjct: 2   LVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEEDV 61

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
           +  V    + FG+LD+ VN AGI+    +         + +D+ R+L VN  G F + R 
Sbjct: 62  EALVEEALEEFGRLDILVNNAGIARPGPLEEL------TDEDWDRVLDVNLTGVFLLTRA 115

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
           +   + +         G I+N +S+A      GQ AY+ASK+ + G+T  +A +LA  GI
Sbjct: 116 ALPHMKKQG------GGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGI 169

Query: 186 RVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL--INGE 243
           RVN +APGL DTP+L+ L  +       +     RLG P+E A+ V  + ++    I G+
Sbjct: 170 RVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQ 229

Query: 244 VIRID 248
           VI +D
Sbjct: 230 VIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  176 bits (448), Expect = 9e-55
 Identities = 89/264 (33%), Positives = 138/264 (52%), Gaps = 32/264 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G   LVTG + G+G+A   R+  +G +VV+ D      E++A EL   G + +    D
Sbjct: 3   LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFD 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           V+ E  V+  +    ++FG LD+ VN AGI+            +   S +D+ R++ VN 
Sbjct: 63  VSDEAAVRALIEAAVEAFGALDILVNNAGIT--------RDALLPRMSEEDWDRVIDVNL 114

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            GTFNV R +   + + +       G I+N +S++   G  GQ  YSA+K+G++G T  +
Sbjct: 115 TGTFNVVRAALPPMIKAR------YGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKAL 168

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ---- 232
           A +LA  GI VN +APG  DT +   L E+V+  + + IP   RLG P+E A  V     
Sbjct: 169 ALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPL-GRLGQPEEVANAVAFLAS 227

Query: 233 ---SIITNPLINGEVIRIDGALRM 253
              S IT     G+VI ++G + M
Sbjct: 228 DAASYIT-----GQVIPVNGGMYM 246

Length = 246

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  174 bits (445), Expect = 3e-54
 Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 23/262 (8%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAP 56
            L+G V LVTG + G+G+A  ER+  +G  VV+    +  G E++  E+   G       
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
            DV+  E V++AV   K  FG +D+ VN AGI+            +     +D+ R++  
Sbjct: 62  GDVSDAESVERAVDEAKAEFGGVDILVNNAGIT--------RDNLLMRMKEEDWDRVIDT 113

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N  G FN+ +  A+ + + +       G IIN +S+    G  GQ  Y+ASK+G++G T 
Sbjct: 114 NLTGVFNLTKAVARPMMKQR------SGRIINISSVVGLMGNPGQANYAASKAGVIGFTK 167

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
            +AR+LA  GI VN +APG  +T +   L E V+  +   IP   RLG P+E A  V  +
Sbjct: 168 SLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPL-GRLGQPEEIASAVAFL 226

Query: 235 ITNPL--INGEVIRIDGALRMI 254
            ++    I G+ + ++G + M 
Sbjct: 227 ASDEAAYITGQTLHVNGGMVMG 248

Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  169 bits (430), Expect = 3e-52
 Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 22/253 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGPDVKFAPVDVTSE 62
           V LVTG + G+G+A   R+  EG +V + D             K LG +      DV+  
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTF 120
           E V+  V   +  FG +D+ VN AGI+            +   S +D+  ++ VN  G F
Sbjct: 62  EAVEALVEKVEAEFGPVDILVNNAGIT--------RDNLLMRMSEEDWDAVINVNLTGVF 113

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NV +   + + + +       G IIN +S+    G  GQ  Y+ASK+G++G T  +A++L
Sbjct: 114 NVTQAVIRAMIKRR------SGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKEL 167

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP-- 238
           A  GI VN +APG  DT +   L EKV+  + + IP   RLG P+E A  V  + ++   
Sbjct: 168 ASRGITVNAVAPGFIDTDMTDALPEKVKEKILKQIPL-GRLGTPEEVANAVAFLASDDAS 226

Query: 239 LINGEVIRIDGAL 251
            I G+V+ ++G +
Sbjct: 227 YITGQVLHVNGGM 239

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  161 bits (410), Expect = 4e-49
 Identities = 87/265 (32%), Positives = 131/265 (49%), Gaps = 28/265 (10%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG------ESVAKELGPDVKF 54
            L G V LVTG +SG+G+A    + REG RVV+    + E        ++ +  G     
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 55  APVDVTS-EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILL 113
              DV+  EE V+  V   ++ FG++D+ VN AGI+              + +D+ R++ 
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPL-----EELTEEDWDRVID 116

Query: 114 VNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
           VN +G F + R +  L+ +           I+N +S+A   G  GQ AY+ASK+ ++G+T
Sbjct: 117 VNLLGAFLLTRAALPLMKK---------QRIVNISSVAGLGGPPGQAAYAASKAALIGLT 167

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN---FLARSIPAPQRLGHPDEFAQL 230
             +A +LA  GIRVN +APG  DTP+ + L          LA  IP   RLG P+E A  
Sbjct: 168 KALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPL-GRLGTPEEVAAA 226

Query: 231 V---QSIITNPLINGEVIRIDGALR 252
           V    S      I G+ + +DG L 
Sbjct: 227 VAFLASDEAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  159 bits (404), Expect = 4e-48
 Identities = 100/258 (38%), Positives = 144/258 (55%), Gaps = 13/258 (5%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVA--KELGPDVKFAPVD 58
           LK  V ++TGGA GLG+A  E + ++G ++ L DL   +  E+VA    LG +V+    +
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH---SLDDFKRILLVN 115
           VT EEDV+       + FG+L+  +N AGI     +     G V    SL+ F+ ++ VN
Sbjct: 63  VTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVN 122

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G F   R +A      K+ E G +GVIIN +SIA   G  GQ  YSASK+G+  MT+ 
Sbjct: 123 LTGVFLCGREAAA-----KMIESGSKGVIINISSIARA-GNMGQTNYSASKAGVAAMTVT 176

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            A++LA  GIRV  IAPG+ +T + + +  +    L + IP   RLG P+E A  V+ II
Sbjct: 177 WAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPV-GRLGEPEEIAHTVRFII 235

Query: 236 TNPLINGEVIRIDGALRM 253
            N  + G V+ IDG LR+
Sbjct: 236 ENDYVTGRVLEIDGGLRL 253

Length = 253

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  155 bits (394), Expect = 9e-47
 Identities = 80/250 (32%), Positives = 131/250 (52%), Gaps = 19/250 (7%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPVDVTSEE 63
           LVTG + G+G+A   ++ +EG +V++    + EG E V +EL   G        DV+  E
Sbjct: 2   LVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDRE 61

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
           DV+  V   ++  G +D+ VN AGI+        N       +D+  ++  N  G FN+ 
Sbjct: 62  DVKAVVEEIEEELGPIDILVNNAGIT------RDNLLMRMKEEDWDAVIDTNLTGVFNLT 115

Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
           +   +++ + +       G IIN +S+    G +GQ  Y+ASK+G++G T  +A++LA  
Sbjct: 116 QAVLRIMIKQR------SGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASR 169

Query: 184 GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLIN 241
            I VN +APG  DT +   L+EKV+  +   IP   R G P+E A  V  + ++    I 
Sbjct: 170 NITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPL-GRFGTPEEVANAVAFLASDEASYIT 228

Query: 242 GEVIRIDGAL 251
           G+VI +DG +
Sbjct: 229 GQVIHVDGGM 238

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  155 bits (394), Expect = 1e-46
 Identities = 80/264 (30%), Positives = 112/264 (42%), Gaps = 30/264 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD--VKFAPVD 58
            L+G V +VTG +SG+G+    R   EG RVV+ D      E VA E+           D
Sbjct: 2   RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAAD 61

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V+ E DV+ AV    + FG +D+ VN AG +                 +F RI  VN   
Sbjct: 62  VSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPL-----LDVDEAEFDRIFAVNVKS 116

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            +    L  Q        E G  G I+N AS A    + G   Y+ASK  ++ +T  +A 
Sbjct: 117 PY----LWTQAAVPAMRGEGG--GAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAA 170

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFAQLV--- 231
           +L    IRVN +AP + +T LL         + R     +IP   RLG P++ A      
Sbjct: 171 ELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPL-GRLGTPEDIANAALFL 229

Query: 232 ----QSIITNPLINGEVIRIDGAL 251
                S IT     G  + +DG  
Sbjct: 230 ASDEASWIT-----GVTLVVDGGR 248

Length = 251

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  154 bits (391), Expect = 2e-46
 Identities = 90/258 (34%), Positives = 127/258 (49%), Gaps = 26/258 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           LKG V +VTGGA GLG A    +V EG +VVL D+   EG++ A ELG   +F  +DVT 
Sbjct: 3   LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHLDVTD 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
           E+     V   +++FG+LDV VN AGI           GTV   +L++++R+L +N  G 
Sbjct: 63  EDGWTAVVDTAREAFGRLDVLVNNAGIL--------TGGTVETTTLEEWRRLLDINLTGV 114

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F   R     + E         G IIN +SI    G     AY+ASK  + G+T   A +
Sbjct: 115 FLGTRAVIPPMKEAG------GGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALE 168

Query: 180 LA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGH---PDEFAQLVQSI 234
            A  G GIRVN++ PG   TP   M +E +             +G    PDE A  V  +
Sbjct: 169 CATQGYGIRVNSVHPGYIYTP---MTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYL 225

Query: 235 ITN--PLINGEVIRIDGA 250
            ++    + G  + +DG 
Sbjct: 226 ASDESSFVTGSELVVDGG 243

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  153 bits (389), Expect = 7e-46
 Identities = 90/254 (35%), Positives = 141/254 (55%), Gaps = 19/254 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAKEL---GPDVKFAPV 57
           L G V +VTG + G+G+A  E + +EG +VV+  D+     + + +E+   G D      
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV+SEEDV+  V    + FGK+D+ VN AGIS  F +      T  + +++ R++ VN  
Sbjct: 63  DVSSEEDVENLVEQIVEKFGKIDILVNNAGIS-NFGLV-----TDMTDEEWDRVIDVNLT 116

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G   + R +   + + K       GVI+N +SI    G S +V YSASK  +   T  +A
Sbjct: 117 GVMLLTRYALPYMIKRK------SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALA 170

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           ++LA +GIRVN +APG  DT + S  +E+ +  LA  IP   RLG P+E A++V  + ++
Sbjct: 171 KELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLG-RLGKPEEIAKVVLFLASD 229

Query: 238 --PLINGEVIRIDG 249
               I G++I +DG
Sbjct: 230 DASYITGQIITVDG 243

Length = 247

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  143 bits (363), Expect = 4e-42
 Identities = 82/266 (30%), Positives = 124/266 (46%), Gaps = 31/266 (11%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG----ESVAKELGPDVKFAPVDVTS 61
           V ++TG A G+G+A  ER+  +G  +VL DL   E          E G +      DVT 
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           ++DV+  +    + FG  DV VN AGI+    +    +      +D K++  VN  G   
Sbjct: 64  KDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITE------EDLKKVYAVNVFGVLF 117

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             + +A      +  + G  G IIN +SIA  +G     AYSASK  + G+T   A++LA
Sbjct: 118 GIQAAA-----RQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELA 172

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKV-----------RNFLARSIPAPQRLGHPDEFAQL 230
             GI VN  APG+  T +   ++E+V               + SIP   RL  P++ A L
Sbjct: 173 PKGITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPL-GRLSEPEDVAGL 231

Query: 231 VQSIITNP---LINGEVIRIDGALRM 253
           V S + +     I G+ I +DG +  
Sbjct: 232 V-SFLASEDSDYITGQTILVDGGMVY 256

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  143 bits (362), Expect = 7e-42
 Identities = 79/259 (30%), Positives = 112/259 (43%), Gaps = 19/259 (7%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
            L G   LVTG A GLG A  E +   G  V   D   +E   +A  L   G        
Sbjct: 4   NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+     VQ+       + G LD  VN AGI+ +             +D +  ++ VN  
Sbjct: 64  DLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATEL------DIDTWDAVMNVNVR 117

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           GTF + R +   +       D  RG I+N AS  A  G     AY ASK  ++GMT  +A
Sbjct: 118 GTFLMLRAALPHL------RDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLA 171

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           R+L G GI VN IAPGL  T   + +    R+       A +RL  PD+ A  V   + +
Sbjct: 172 RELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAV-LFLLS 230

Query: 238 PL---INGEVIRIDGALRM 253
                + G+++ ++G   M
Sbjct: 231 DAARFVTGQLLPVNGGFVM 249

Length = 250

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  140 bits (354), Expect = 9e-41
 Identities = 87/259 (33%), Positives = 137/259 (52%), Gaps = 21/259 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP-DVKFAPVDVT 60
           L G V ++TGGASG+G+AT     + G RVV+ D+    G++VA ELG  D+ F   DVT
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDVT 61

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVG 118
            E DV+ AV      FG+LD+  N AG+  A  + I         SL++F+R+L VN  G
Sbjct: 62  VEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILET------SLEEFERVLDVNVYG 115

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F   + +A+++   K      +G I++ AS+A   G  G  AY+ASK  ++G+T   A 
Sbjct: 116 AFLGTKHAARVMIPAK------KGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAAT 169

Query: 179 DLAGAGIRVNTIAPGLFDTPLL----SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
           +L   GIRVN ++P    TPLL     + +E +   +  +         P++ A  V  +
Sbjct: 170 ELGEHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYL 229

Query: 235 ITNP--LINGEVIRIDGAL 251
            ++    ++G+ + +DG L
Sbjct: 230 ASDDSRYVSGQNLVVDGGL 248

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  136 bits (346), Expect = 1e-39
 Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 18/235 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G V LVTG A G+G+A   R+  +G  V++ D+   +  + A+ +   G   +   VD
Sbjct: 4   LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVD 63

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V     ++ AV    + FG+LD+ V  AGI      F          + ++R++ VN  G
Sbjct: 64  VRDRAALKAAVAAGVEDFGRLDILVANAGI------FPLTPFAEMDDEQWERVIDVNLTG 117

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPMA 177
           TF + + +   +           G I+ T+S+A    G  G   Y+ASK+G+VG T  +A
Sbjct: 118 TFLLTQAALPAL------IRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALA 171

Query: 178 RDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
            +LA   I VN++ PG  DTP+  ++ + +    +A +IP   RLG P++ A  V
Sbjct: 172 LELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLG-RLGEPEDIAAAV 225

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  135 bits (342), Expect = 6e-39
 Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 27/263 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE----LGPDVKFAPV 57
           L G V LVTG A GLG+A   R+ R G  VV+      E      E    LG   +    
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQA 63

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DVT +  ++ AV    + FG++D+ VN AGI     + +       S D++  ++ VN  
Sbjct: 64  DVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADM------SDDEWDEVIDVNLS 117

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F++ R     + + +       G I+N +S+A   G  G+  Y+A+K+G+VG+T  +A
Sbjct: 118 GVFHLLRAVVPPMRKQRG------GRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALA 171

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV------ 231
           R+LA  GI VN +APG  DT +     E+ R       P   R G P++ A+ V      
Sbjct: 172 RELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPL-GRSGTPEDIARAVAFLCSD 230

Query: 232 QSIITNPLINGEVIRIDGALRMI 254
            S      I G+VI + G + +I
Sbjct: 231 AS----DYITGQVIEVTGGVDVI 249

Length = 249

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  132 bits (334), Expect = 6e-38
 Identities = 83/256 (32%), Positives = 125/256 (48%), Gaps = 23/256 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE----LGPDVKFAPVDVTS 61
           + LVTGG  G+G A  +R+ ++G RV     P  E      +    LG D +    DV+S
Sbjct: 2   IALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS 61

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNTVGT 119
            E  + AV   +   G +DV VN AGI+           T   +    +  ++  N    
Sbjct: 62  FESCKAAVAKVEAELGPIDVLVNNAGIT--------RDATFKKMTYEQWSAVIDTNLNSV 113

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           FNV +    +I  + + E G  G IIN +S+   +GQ GQ  YSA+K+G++G T  +A++
Sbjct: 114 FNVTQ---PVI--DGMRERGW-GRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQE 167

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
            A  G+ VNTI+PG   T ++  + E V N +   IP   RLG P+E A  V  + +   
Sbjct: 168 GATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPV-GRLGRPEEIAAAVAFLASEEA 226

Query: 239 -LINGEVIRIDGALRM 253
             I G  + I+G L M
Sbjct: 227 GYITGATLSINGGLYM 242

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  132 bits (335), Expect = 7e-38
 Identities = 81/251 (32%), Positives = 122/251 (48%), Gaps = 16/251 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V +VTGGASG+G A  E    +G RV L D      E  A+ LG + K    DV+ 
Sbjct: 13  LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD 72

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            + V+ AV     +FG++D+ VN AG++      +       S +D+ + + +N  G+F 
Sbjct: 73  SQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDV------SEEDWDKTIDINLKGSFL 126

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +A+   +      +   G  G I+N AS A        VAY ASK+G+VGMT  +A +  
Sbjct: 127 MAQAVGR-----HMIAAG-GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWG 180

Query: 182 GAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--P 238
             GI VN I+P +  T L       +      + IPA  R  +P+E A     + ++   
Sbjct: 181 PYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPA-GRFAYPEEIAAAALFLASDAAA 239

Query: 239 LINGEVIRIDG 249
           +I GE + IDG
Sbjct: 240 MITGENLVIDG 250

Length = 255

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  132 bits (333), Expect = 1e-37
 Identities = 90/257 (35%), Positives = 124/257 (48%), Gaps = 22/257 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V +VTG  SG G+    R  +EG RVV+ D+     E VA ++G        DVT 
Sbjct: 3   LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVTK 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNTVGTF 120
             DV+  V      FG+LD+ VN AGI+      + NK  +    ++F R+  VN    +
Sbjct: 63  RADVEAMVEAALSKFGRLDILVNNAGIT------HRNKPMLEVDEEEFDRVFAVNVKSIY 116

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
               LSAQ +  +   + G  GVIIN AS A    + G   Y+ASK  +V  T  MA +L
Sbjct: 117 ----LSAQALVPHMEEQGG--GVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVEL 170

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLN-----EKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           A   IRVN + P   +TPLLSM       E    F A +IP   RL  PD+ A     + 
Sbjct: 171 APRNIRVNCLCPVAGETPLLSMFMGEDTPENRAKFRA-TIPL-GRLSTPDDIANAALYLA 228

Query: 236 TN--PLINGEVIRIDGA 250
           ++    I G  + +DG 
Sbjct: 229 SDEASFITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  137 bits (347), Expect = 1e-37
 Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 17/253 (6%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
           +  V LVTG A G+G+A  +R  R G +VV+ D         A  LGPD     +DV+ E
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDE 63

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
             +++        FG++DV VN AG++        +     +L++F R+  +N  G + V
Sbjct: 64  AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDT----TLEEFARLQAINLTGAYLV 119

Query: 123 ARLSAQLIHENKLNEDGLRGV-IINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           AR + +L+ E         G  I+N AS A       + AYSASK+ ++ +T  +A + A
Sbjct: 120 AREALRLMIEQG------HGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWA 173

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNE--KV-RNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
             GIRVN + PG   T +++ L    K+  + +   IP   RLG P+E A+ V  + ++ 
Sbjct: 174 AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPL-GRLGRPEEIAEAVFFLASDQ 232

Query: 239 --LINGEVIRIDG 249
              I G  + +DG
Sbjct: 233 ASYITGSTLVVDG 245

Length = 520

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  131 bits (332), Expect = 2e-37
 Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 21/234 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD----VKFAPV 57
           LKG V +VTGG+ G+G A    +   G  V +        E  A+EL        K    
Sbjct: 6   LKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKC 65

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV+S+E V+K     +  FGK+D+ +  AGI+      +Y        + + +++ VN  
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTY------EQWNKVIDVNLN 119

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY---EGQSGQVAYSASKSGIVGMTL 174
           G FN A+ +A++  +        +G +I TAS++       Q  Q AY+ASK+ ++ +  
Sbjct: 120 GVFNCAQAAAKIFKKQG------KGSLIITASMSGTIVNRPQP-QAAYNASKAAVIHLAK 172

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
            +A + A   IRVN+I+PG  DT L   +++++R      IP  +R+  P+E  
Sbjct: 173 SLAVEWAKYFIRVNSISPGYIDTDLTDFVDKELRKKWESYIPL-KRIALPEELV 225

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  131 bits (330), Expect = 4e-37
 Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 26/262 (9%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTGGA G+GK   ER+ ++G  V + DL     +  AKE+   G       +DV+ +
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           + V  A+    + FG  DV VN AG++    I    +      ++ K++  VN  G    
Sbjct: 62  DQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITE------EELKKVYNVNVKGVL-- 113

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
                Q     +  + G  G IIN ASIA +EG     AYS++K  + G+T   A++LA 
Sbjct: 114 --FGIQAAAR-QFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAP 170

Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ----------RLGHPDEFAQLVQ 232
            GI VN   PG+  TP+   ++E+      + I              R   P++ A LV 
Sbjct: 171 KGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVS 230

Query: 233 SIITNP--LINGEVIRIDGALR 252
            + +     I G+ I +DG + 
Sbjct: 231 FLASEDSDYITGQSILVDGGMV 252

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 6e-37
 Identities = 82/236 (34%), Positives = 122/236 (51%), Gaps = 23/236 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V +VTGGA+ +G A    +V  G RV + D+    G +VA  LG   +F   D+T 
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           +  +++AV      FG++D+ VN A   C +     + G   S  D+   L VN V    
Sbjct: 64  DAAIERAVATVVARFGRVDILVNLA---CTYL----DDGLASSRADWLAALDVNLVS--- 113

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            A + AQ  H + L   G  G I+N  SI+A   Q+G+  Y ASK+ I  +T  MA DLA
Sbjct: 114 -AAMLAQAAHPH-LARGG--GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLA 169

Query: 182 GAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAP----QRLGHPDEFAQLV 231
             GIRVN+++PG   + ++  L   ++ +   A  + AP     R+G P+E AQ+V
Sbjct: 170 PDGIRVNSVSPGWTWSRVMDELSGGDRAK---ADRVAAPFHLLGRVGDPEEVAQVV 222

Length = 261

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  130 bits (328), Expect = 6e-37
 Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 23/257 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTS----EGESVAKELGPDVKFAPVDVTS 61
           + LVTG   G+G A    ++ +G RV+      +    +           V+   +DVT 
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
            E+  +A+   ++  G +D+ VN AGI+                S  ++  ++  N    
Sbjct: 64  TEECAEALAEIEEEEGPVDILVNNAGIT--------RDSVFKRMSHQEWNDVINTNLNSV 115

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           FNV     Q +      +   R  IIN +S+   +GQ GQ  YSA+K+G++G T  +A +
Sbjct: 116 FNVT----QPLFAAMCEQGYGR--IINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASE 169

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
            A  GI VN IAPG   TP++  +  +V   +   IP  +RLG P+E A  V  +++   
Sbjct: 170 GARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPM-KRLGTPEEIAAAVAFLVSEAA 228

Query: 239 -LINGEVIRIDGALRMI 254
             I GE I I+G L M 
Sbjct: 229 GFITGETISINGGLYMH 245

Length = 245

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  130 bits (329), Expect = 6e-37
 Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 33/266 (12%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVT 60
           G V LVT  +SG+G A    + REG RV +C       E  A EL   G  V     D+T
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVG 118
             ED+ + V    D+FG++D+ VN AG            G    L  +D+     +  + 
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAG--------GPPPGPFAELTDEDWLEAFDLKLLS 112

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
              + R     + E         G I+N +S+   E +   V  + +++G++G+   ++R
Sbjct: 113 VIRIVRAVLPGMKERG------WGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSR 166

Query: 179 DLAGAGIRVNTIAPGLFDTPLL-----------SMLNEKVRNFLARSIPAPQRLGHPDEF 227
           +LA  G+ VN++ PG  DT  +            +  E+    +A  IP   R+G P+E 
Sbjct: 167 ELAPDGVTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPL-GRVGKPEEL 225

Query: 228 AQLVQSIITNP--LINGEVIRIDGAL 251
           A L+  + +     I G+ I +DG L
Sbjct: 226 AALIAFLASEKASYITGQAILVDGGL 251

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  128 bits (325), Expect = 2e-36
 Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 16/248 (6%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDL---PTSEGESVAKELGPDVKFAPVDVTSE 62
           V ++TGGASG+G AT + ++++G +V + D    P +  E  A        F   DVTS 
Sbjct: 2   VAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTSW 61

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           E +  A     + FG++D+ +N AGI          K         ++ + VN  G  N 
Sbjct: 62  EQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPW----EKTIDVNLTGVINT 117

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA-RDLA 181
             L+   +H    N+ G  GVI+N  S+A          YSASK G+VG T  +A     
Sbjct: 118 TYLA---LHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEY 174

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             G+RVN I PG  +TPLL  L  K    L  +         P+  A+ +  +I +   N
Sbjct: 175 KTGVRVNAICPGFTNTPLLPDLVAKEAEMLPSAPTQS-----PEVVAKAIVYLIEDDEKN 229

Query: 242 GEVIRIDG 249
           G +  +DG
Sbjct: 230 GAIWIVDG 237

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  129 bits (325), Expect = 2e-36
 Identities = 90/262 (34%), Positives = 120/262 (45%), Gaps = 27/262 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDV 59
           L G V +VTG  SG+G+AT +   REG RVV+ D      E VA  +  G        DV
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDV 62

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNTV 117
            S E V+  V      +G+LDV VN AG  C         GTV + D  D+  ++ VN  
Sbjct: 63  GSAEAVEALVDFVAARWGRLDVLVNNAGFGCG--------GTVVTTDEADWDAVMRVNVG 114

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F  A+ +  ++           G I+NTAS  A  G  G+ AY ASK  I  +T  MA
Sbjct: 115 GVFLWAKYAIPIMQRQG------GGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMA 168

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLV 231
            D A  GIRVN +APG  DTP    +       E +R  L R+     R G  +E AQ  
Sbjct: 169 LDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREAL-RARHPMNRFGTAEEVAQAA 227

Query: 232 QSIITN--PLINGEVIRIDGAL 251
             + ++      G  + +DG  
Sbjct: 228 LFLASDESSFATGTTLVVDGGW 249

Length = 252

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  126 bits (318), Expect = 2e-35
 Identities = 77/262 (29%), Positives = 117/262 (44%), Gaps = 29/262 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           LKG V  +TGG +G+GKA  +     G  V +        E+ A+E+    G        
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG---ISCAFKIFNYNKGTVHSLDDFKRILLV 114
           DV   E V+ AV      FGK+D+ +N A    ++ A  +         S + FK ++ +
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESL---------SPNGFKTVIDI 111

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           +  GTFN  +         +L E    G I+N ++  AY G   QV  +A+K+G+  +T 
Sbjct: 112 DLNGTFNTTKAVG-----KRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTR 166

Query: 175 PMARDLAGAGIRVNTIAPGLFD-TPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLV 231
            +A +    GIRVN IAPG    T  +  L    K    +   +P   RLG P+E A L 
Sbjct: 167 SLAVEWGPYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPL-GRLGTPEEIANLA 225

Query: 232 QSIITNPL---INGEVIRIDGA 250
              + +     ING  + +DG 
Sbjct: 226 -LFLLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  125 bits (317), Expect = 4e-35
 Identities = 68/197 (34%), Positives = 100/197 (50%), Gaps = 11/197 (5%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V L+TG ASG+G+A  ER + EG RVV+ D+  +     A E+GP      +DVT 
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           ++ + + V    + FG +D+  N A       +F+       S D + R+  VN  G F 
Sbjct: 64  QDSIDRIVAAAVERFGGIDILFNNAA------LFDMAPILDISRDSYDRLFAVNVKGLFF 117

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + +  A+      + E G  G IIN AS A   G++    Y A+K+ ++  T   A  L 
Sbjct: 118 LMQAVAR-----HMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALI 172

Query: 182 GAGIRVNTIAPGLFDTP 198
             GI VN IAPG+ DTP
Sbjct: 173 RHGINVNAIAPGVVDTP 189

Length = 257

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 5e-35
 Identities = 84/234 (35%), Positives = 118/234 (50%), Gaps = 17/234 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V ++TGG SG+G AT  R+  EG  VV+ D+    G++ A E+G    F P DVT 
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--GLFVPTDVTD 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+ V        +++G +D+  N AGIS        N G    LD ++R+  VN    + 
Sbjct: 63  EDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTG----LDAWQRVQDVNLTSVYL 118

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-SGQVAYSASKSGIVGMTLPMARDL 180
             +  A L H   +   G +G IINTAS  A  G  + Q++Y+ASK G++ M+  +    
Sbjct: 119 CCK--AALPH---MVRQG-KGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQF 172

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS---IPAPQRLGHPDEFAQLV 231
           A  GIRVN + PG  +TPLL  L  K     AR    +P   R   P+E A  V
Sbjct: 173 ARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPM-GRFAEPEEIAAAV 225

Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  125 bits (315), Expect = 7e-35
 Identities = 87/268 (32%), Positives = 121/268 (45%), Gaps = 36/268 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAP 56
           L G V LVTG A G+G A      REG  V L DL  +  E  A  +     G  V   P
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DVT    V  AV   +++FG LDV VN AGI+       +      + +D++R   V+ 
Sbjct: 65  ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINV------FADPLAMTDEDWRRCFAVDL 118

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G +N  R  A L     + E G RG I+N AS  A++   G   Y  +K G++G+T  +
Sbjct: 119 DGAWNGCR--AVLPG---MVERG-RGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRAL 172

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA-----------PQRLGHPD 225
             + A   +RVN IAPG  +T L          + A+  PA            +R+G P+
Sbjct: 173 GIEYAARNVRVNAIAPGYIETQLT------EDWWNAQPDPAAARAETLALQPMKRIGRPE 226

Query: 226 EFAQLVQSIITN--PLINGEVIRIDGAL 251
           E A     + ++  P IN   I IDG  
Sbjct: 227 EVAMTAVFLASDEAPFINATCITIDGGR 254

Length = 260

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  124 bits (314), Expect = 1e-34
 Identities = 59/246 (23%), Positives = 104/246 (42%), Gaps = 29/246 (11%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           L+TG +SG+G A    +  +G RV+       + ES+ + L  +++   +DVT EE ++ 
Sbjct: 4   LITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEESIKA 63

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTFNVARL 125
           AV    + FG++DV VN AG            G +   S+++ + +  VN  G   V R 
Sbjct: 64  AVKEVIERFGRIDVLVNNAGYGLF--------GPLEETSIEEVRELFEVNVFGPLRVTRA 115

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
              L+ +         G I+N +S+A          Y ASK+ +  ++  +  +LA  GI
Sbjct: 116 FLPLMRKQG------SGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGI 169

Query: 186 RVNTIAPGLFDTPLL-------------SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
           +V  I PG   T                S    + +     +       G P++ A ++ 
Sbjct: 170 KVTIIEPGPVRTGFADNAAGSALEDPEISPYAPERKEIKENAAGVGSNPGDPEKVADVIV 229

Query: 233 SIITNP 238
             +T+ 
Sbjct: 230 KALTSE 235

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 1e-34
 Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 33/264 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-------GPDVKF 54
           L     L+TGG+ GLG+A   R+  +G  V++ D+    G + A  +       G     
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 55  APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGIS--CAFKIFNYNKGTVHSLDDFKRIL 112
              DV      + A+    + FG+LD+ VN AGI+   AF           S++++  ++
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAEL--------SIEEWDDVI 115

Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
            VN  G FNV +  A L    +    G    I+N AS+A   G  GQV Y+ASK+G++G+
Sbjct: 116 DVNLDGFFNVTQ--AALPPMIRARRGG---RIVNIASVAGVRGNRGQVNYAASKAGLIGL 170

Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAP-QRLGHPDEFAQ 229
           T  +A +LA  GI VN +APG  +TP+       E + N      P P QRLG PDE A 
Sbjct: 171 TKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLN------PVPVQRLGEPDEVAA 224

Query: 230 LVQSIITN--PLINGEVIRIDGAL 251
           LV  ++++    + G+VI +DG  
Sbjct: 225 LVAFLVSDAASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  124 bits (313), Expect = 1e-34
 Identities = 81/242 (33%), Positives = 115/242 (47%), Gaps = 30/242 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVL---CDLPTSEG-ESVAKELGPDVKFAPV 57
           LKG V LVTG +SG+GKA   R+   G  VV+        +E      K +G        
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           DV+ EEDV          FG LD+ VN AG+            + H  +L+D+ +++ VN
Sbjct: 61  DVSKEEDVVALFQSAIKEFGTLDILVNNAGLQ--------GDASSHEMTLEDWNKVIDVN 112

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G F  AR + +   ++K+     +G IIN +S+       G V Y+ASK G+  MT  
Sbjct: 113 LTGQFLCAREAIKRFRKSKI-----KGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKT 167

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV------RNFLARSIPAPQRLGHPDEFAQ 229
           +A++ A  GIRVN IAPG  +TP    +N +       R  L   IP   R+G P+E A 
Sbjct: 168 LAQEYAPKGIRVNAIAPGAINTP----INAEAWDDPEQRADLLSLIPMG-RIGEPEEIAA 222

Query: 230 LV 231
             
Sbjct: 223 AA 224

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  123 bits (311), Expect = 2e-34
 Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 27/260 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V +VTG  +G+G A   R+ REG RVV+ D+     ++V  ++        VDVT 
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTD 60

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGI-SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           E+ V        + FG LD+ VN AG       I +        L  + + + +N  GTF
Sbjct: 61  EQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDT------DLAVWDQTMAINLRGTF 114

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R +A  +    +   G  G I+N +SIA   G  G  AY ASK+ I  +T  +A +L
Sbjct: 115 LCCRHAAPRM----IARGG--GSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAEL 168

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAP---------QRLGHPDEFAQLV 231
             AGIR N +APGL DTP   +L  K+  F     P            RLG P++ A  V
Sbjct: 169 RHAGIRCNALAPGLIDTP---LLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAV 225

Query: 232 QSIITN--PLINGEVIRIDG 249
             ++++    I G+V+ +DG
Sbjct: 226 VFLLSDDASFITGQVLCVDG 245

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  128 bits (323), Expect = 3e-34
 Identities = 84/251 (33%), Positives = 129/251 (51%), Gaps = 19/251 (7%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           V  +TGGA G+G+A  +R    G R+++ D      + +A+ LG +      D+T E  V
Sbjct: 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAV 330

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
           + A    +  +G+LDV VN AGI+  FK          S +DF R+  VN  G F  AR 
Sbjct: 331 ESAFAQIQARWGRLDVLVNNAGIAEVFK-----PSLEQSAEDFTRVYDVNLSGAFACARA 385

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
           +A+L+ +         GVI+N  SIA+      + AY ASK+ +  ++  +A + A AGI
Sbjct: 386 AARLMSQG--------GVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGI 437

Query: 186 RVNTIAPGLFDTPLLSMLNEKVR---NFLARSIPAPQRLGHPDEFAQLVQSIITN--PLI 240
           RVNT+APG  +TP +  L    R   + + R IP   RLG P+E A+ +  + +     +
Sbjct: 438 RVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL-GRLGDPEEVAEAIAFLASPAASYV 496

Query: 241 NGEVIRIDGAL 251
           NG  + +DG  
Sbjct: 497 NGATLTVDGGW 507

Length = 520

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 3e-34
 Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 24/259 (9%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGPDVKFAPV 57
              G V LVTGGA+G+G+AT     REG +VV+ D   + GE      +E G +  F   
Sbjct: 4   TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVAC 63

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVN 115
           DVT + +V+  V     ++G+LD   N AGI          +G +   S  +F  I+ VN
Sbjct: 64  DVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIE-------QGRLAEGSEAEFDAIMGVN 116

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G +   +    L+    L + G  G I+NTAS+A          Y+ASK  ++G+T  
Sbjct: 117 VKGVWLCMKYQIPLM----LAQGG--GAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKS 170

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNE---KVRNFLARSIPAPQRLGHPDEFAQLVQ 232
            A + A  GIRVN + P + DT +     E   +   F A   P   R+G  +E A  V 
Sbjct: 171 AAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV-GRIGKVEEVASAVL 229

Query: 233 SIITN--PLINGEVIRIDG 249
            + ++      G  + +DG
Sbjct: 230 YLCSDGASFTTGHALMVDG 248

Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 4e-34
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
           MLKG V LVTG ASG+G      + +EG +VV+ DL      + A+ L   G       +
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DVT EE +   +    ++FG +D+ VN AGI     I ++        + +K+++ +   
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDF------PTEKWKKMIAIMLD 114

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F   + +  ++           G IIN AS+    G +G+ AY ++K G++G+T  +A
Sbjct: 115 GAFLTTKAALPIMKAQGG------GRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVA 168

Query: 178 RDLAGAGIRVNTIAPGLFDTPL 199
            + A  G+ VN I PG  DTPL
Sbjct: 169 LEGATHGVTVNAICPGYVDTPL 190

Length = 258

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  122 bits (306), Expect = 1e-33
 Identities = 92/259 (35%), Positives = 136/259 (52%), Gaps = 22/259 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKEL---GPDVKFAPV 57
           L G V +VTGGA G+GKA    + +EG +VV+    + E  E++  EL   G DV     
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQA 63

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISC--AFKIFNYNKGTVHSLDDFKRILLVN 115
           DV+  ED  + V    + FGK+D+ VN AGI+    FK  N         +D++R++ VN
Sbjct: 64  DVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNR--------EDWERVIDVN 115

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               FN    SA L +  +  E    G II+ +SI    G  GQ  YSA+K+G++G T  
Sbjct: 116 LSSVFNTT--SAVLPYITEAEE----GRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKS 169

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           +A +LA   + VN I PG  DT +++ + E+VR  +   IP  +R G  DE A+ V  + 
Sbjct: 170 LALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPK-KRFGQADEIAKGVVYLC 228

Query: 236 TN-PLINGEVIRIDGALRM 253
            +   I G+ + I+G L M
Sbjct: 229 RDGAYITGQQLNINGGLYM 247

Length = 247

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  121 bits (306), Expect = 1e-33
 Identities = 77/255 (30%), Positives = 122/255 (47%), Gaps = 22/255 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           L G V LVTG + G+G+A  +R+ R+G  VV+    +    E V  E+   G        
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV+    V +     + +FG +D+ VN AG+     +      T  S ++F R+  VNT 
Sbjct: 61  DVSDPSQVARLFDAAEKAFGGVDILVNNAGVM----LKKPIAET--SEEEFDRMFTVNTK 114

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F V + +A+ + +         G IIN +S           AY+ SK+ +   T  +A
Sbjct: 115 GAFFVLQEAAKRLRDG--------GRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLA 166

Query: 178 RDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           ++L G GI VN +APG  DT +  +   E+     A+  P   RLG P++ A +V  + +
Sbjct: 167 KELGGRGITVNAVAPGPVDTDMFYAGKTEEAVEGYAKMSPL-GRLGEPEDIAPVVAFLAS 225

Query: 237 NPL--INGEVIRIDG 249
                +NG+VIR +G
Sbjct: 226 PDGRWVNGQVIRANG 240

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  121 bits (306), Expect = 2e-33
 Identities = 82/266 (30%), Positives = 116/266 (43%), Gaps = 33/266 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPV-DVT 60
           L G+  LVTGGASG+G+A  E     G RV +CD+  +   + A  L      A V DV 
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVA 68

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNTVG 118
               V++      + FG LDV VN AGI+          G +  +    +++ L VN  G
Sbjct: 69  DPAQVERVFDTAVERFGGLDVLVNNAGIAGP-------TGGIDEITPEQWEQTLAVNLNG 121

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F  AR +  L     L   G  GVII  +S+A   G  G+  Y+ASK  +VG+   +A 
Sbjct: 122 QFYFARAAVPL-----LKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAI 176

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ------------RLGHPDE 226
           +L   GIRVN I PG+   P   M            I   +            R+  P++
Sbjct: 177 ELGPLGIRVNAILPGIVRGP--RMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPED 234

Query: 227 FAQLVQSIITNPL---INGEVIRIDG 249
            A     + + P    I G+ I +DG
Sbjct: 235 IAATALFLAS-PAARYITGQAISVDG 259

Length = 264

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  121 bits (304), Expect = 3e-33
 Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 35/264 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           LK  V +VTGG+ G+GKA V R+  EG  V+  +    E          DV +  VDV++
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVI--NFDIKEPSYN------DVDYFKVDVSN 55

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           +E V K +      +G++D+ VN AGI       +Y        D++ RI+ VN  G F 
Sbjct: 56  KEQVIKGIDYVISKYGRIDILVNNAGIE------SYGAIHAVEEDEWDRIINVNVNGIFL 109

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++ +   + +        +GVIIN AS+ ++       AY  SK  ++G+T  +A D A
Sbjct: 110 MSKYTIPYMLKQD------KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYA 163

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNE----KVRNFLARSI-------PAPQRLGHPDEFAQL 230
              IR   + PG   TPLL    E    K    + R I       P  +R+G P+E A +
Sbjct: 164 PT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPM-KRVGKPEEVAYV 221

Query: 231 VQSIITN--PLINGEVIRIDGALR 252
           V  + ++    I GE + +DG LR
Sbjct: 222 VAFLASDLASFITGECVTVDGGLR 245

Length = 258

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  120 bits (303), Expect = 3e-33
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 22/256 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LKG V LVTG + G+G      +   G  +V+      + E   + +   G +      D
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V+ EE ++ AV   ++ FGK+D+ VN AGI         +        +++ ++ VN  G
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGII------RRHPAEEFPEAEWRDVIDVNLNG 116

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F V++  A+ + +         G IIN  S+ +  G     AY+ASK G+ G+T  +A 
Sbjct: 117 VFFVSQAVARHMIKQG------HGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALAT 170

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEF---AQLVQS 233
           + A  GI+VN IAPG F T +   +  + +  + + + IPA  R G P++    A  + S
Sbjct: 171 EWARHGIQVNAIAPGYFATEMTEAVVADPEFNDDILKRIPA-GRWGQPEDLVGAAVFLAS 229

Query: 234 IITNPLINGEVIRIDG 249
             ++  +NG++I +DG
Sbjct: 230 DASD-YVNGQIIFVDG 244

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  117 bits (296), Expect = 6e-32
 Identities = 83/269 (30%), Positives = 119/269 (44%), Gaps = 32/269 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
            L G V L+TGG SG+G+A VER + EG RV + +    +  S+ +  G  V     DVT
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVT 62

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-----FKRILLVN 115
           S  D Q+AV    D+FGKLD  V  AG      I++YN   V    +     F  I  VN
Sbjct: 63  SYADNQRAVDQTVDAFGKLDCFVGNAG------IWDYNTSLVDIPAETLDTAFDEIFNVN 116

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G    A+ +   +  +        G +I T S +++    G   Y+ASK  +VG+   
Sbjct: 117 VKGYLLGAKAALPALKAS-------GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQ 169

Query: 176 MARDLAGAGIRVNTIAPGLFDTPL-----LSMLNEKVRNFLAR-----SIPAPQRLGHPD 225
           +A +LA   IRVN +APG   T L     L      + +         +I   Q    P+
Sbjct: 170 LAYELA-PKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPE 228

Query: 226 EFAQ---LVQSIITNPLINGEVIRIDGAL 251
           +      L+ S   +  + G VI  DG L
Sbjct: 229 DHTGPYVLLASRRNSRALTGVVINADGGL 257

Length = 263

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 7e-32
 Identities = 69/207 (33%), Positives = 100/207 (48%), Gaps = 17/207 (8%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFA-PV 57
              V +V GG   LG      +  EG RV + D+ + +  +VA+E+    G  + +    
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D TSE+ V        + FG++D+ V  AGI+ A  I      T   L DF R L VN V
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFI------TDFQLGDFDRSLQVNLV 114

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F  AR  ++L     +  DG++G II   S +   G      YSA+K G VG+T  +A
Sbjct: 115 GYFLCAREFSRL-----MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLA 169

Query: 178 RDLAGAGIRVNTIAPG-LFDTPLLSML 203
            DLA  GI V+++  G L  +P+   L
Sbjct: 170 LDLAEYGITVHSLMLGNLLKSPMFQSL 196

Length = 259

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  117 bits (295), Expect = 8e-32
 Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 16/195 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDV 59
           L G V LVTGGA+G+G++ V    + G +V + DL    G++V   LG  P+V F   DV
Sbjct: 16  LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDV 75

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTV 117
           T E+DV +AV    D FG LD+ VN AG++      I N        L +F+++  VN  
Sbjct: 76  TVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNV------ELSEFEKVFDVNVK 129

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F   + +A+++   K      +G I++  S+A+  G  G  AY+ SK  ++G+T  +A
Sbjct: 130 GVFLGMKHAARIMIPLK------KGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVA 183

Query: 178 RDLAGAGIRVNTIAP 192
            +L   GIRVN ++P
Sbjct: 184 AELGKHGIRVNCVSP 198

Length = 280

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  122 bits (309), Expect = 9e-32
 Identities = 72/197 (36%), Positives = 96/197 (48%), Gaps = 21/197 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPV--DV 59
           L G V LVTG A G+GKAT +R+  EG  VVL DL     E+ A ELG   +   V  DV
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDV 479

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           T E  VQ A      +FG +D+ V+ AGI+ +  I         S +D++R   VN  G 
Sbjct: 480 TDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEE------TSDEDWRRSFDVNATGH 533

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR- 178
           F VAR + ++     +   GL G I+  AS  A        AY A+K+      L + R 
Sbjct: 534 FLVAREAVRI-----MKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKA----AELHLVRQ 584

Query: 179 ---DLAGAGIRVNTIAP 192
              +L   GIRVN + P
Sbjct: 585 LALELGPDGIRVNGVNP 601

Length = 681

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  116 bits (293), Expect = 1e-31
 Identities = 84/267 (31%), Positives = 132/267 (49%), Gaps = 39/267 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA--KELGPDVKFAPVDV 59
           L+  V ++TG ++G+G+A+   + +EG  V+  D+  +  E+V   K  G   K   VD+
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDI 63

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHS--LDDFKRILLVNTV 117
           + E+ V+      K+ FG++DV  N AG+  A        G +H   +D F +I+ V+  
Sbjct: 64  SDEQQVKDFASEIKEQFGRVDVLFNNAGVDNA-------AGRIHEYPVDVFDKIMAVDMR 116

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA------YSASKSGIVG 171
           GTF + ++   L+ E         G IINT+S       SGQ A      Y+A+K  ++ 
Sbjct: 117 GTFLMTKMLLPLMMEQG-------GSIINTSSF------SGQAADLYRSGYNAAKGAVIN 163

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ-------RLGHP 224
            T  +A +    GIR N IAPG  +TPL+  L     +   ++    Q       RLG P
Sbjct: 164 FTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKP 223

Query: 225 DEFAQLVQSIITN--PLINGEVIRIDG 249
           +E A+LV  + ++    I GE IRIDG
Sbjct: 224 EEVAKLVVFLASDDSSFITGETIRIDG 250

Length = 272

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  116 bits (291), Expect = 2e-31
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 29/260 (11%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTS---EGESVAKELGPDVKFAPV--DVT 60
           V L+TGG SGLG AT  R+ +EG ++ L DL        ++   E+ PD +   +  DV+
Sbjct: 5   VVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVS 64

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
            E  V+  V    + FG++D   N AGI         N       D+F +++ +N  G F
Sbjct: 65  DEAQVEAYVDATVEQFGRIDGFFNNAGIEG-----KQNLTEDFGADEFDKVVSINLRGVF 119

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
                  +++ E         G+I+NTAS+    G   Q  Y+A+K G+VG+T   A + 
Sbjct: 120 YGLEKVLKVMREQGS------GMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEY 173

Query: 181 AGAGIRVNTIAPGLFDTPL----LSMLN-----EKVRNFLARSIPAPQRLGHPDEFAQLV 231
              GIR+N IAPG   TP+    L  L      E    F+  S+   +R G P+E A +V
Sbjct: 174 GQYGIRINAIAPGAILTPMVEGSLKQLGPENPEEAGEEFV--SVNPMKRFGEPEEVAAVV 231

Query: 232 QSIIT--NPLINGEVIRIDG 249
             +++     +N  V+ IDG
Sbjct: 232 AFLLSDDAGYVNAAVVPIDG 251

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  116 bits (292), Expect = 2e-31
 Identities = 74/239 (30%), Positives = 105/239 (43%), Gaps = 32/239 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGES-----VAKELGPDVKFAP 56
           LKG   L+TGG SG+G+A      REG  V +  LP  E ++     + +E G      P
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIP 83

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-----FKRI 111
            D+  E   +  V      FGKLD+ VN A            +    S++D      ++ 
Sbjct: 84  GDLGDESFCRDLVKEVVKEFGKLDILVNNAA----------YQHPQESIEDITTEQLEKT 133

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVG 171
              N    F + + +   + +           IINT S+ AY+G    + Y+A+K  IV 
Sbjct: 134 FRTNIFSMFYLTKAALPHLKKG--------SSIINTTSVTAYKGSPHLLDYAATKGAIVA 185

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTPLL--SMLNEKVRNFLARSIPAPQRLGHPDEFA 228
            T  ++  LA  GIRVN +APG   TPL+  S   EKV  F    +P   R G P E A
Sbjct: 186 FTRGLSLQLAEKGIRVNAVAPGPIWTPLIPSSFPEEKVSEF-GSQVP-MGRAGQPAEVA 242

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 3e-31
 Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 26/258 (10%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAP 56
            L   V +VTG + G+G A   R+  +G  V +    ++   + +  E+   G       
Sbjct: 2   TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQ 61

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DV     V +     + +FG++DV VN AG+     I ++       L+DF R +  N 
Sbjct: 62  ADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADF------DLEDFDRTIATNL 115

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G F V R +A+ +        G R + ++T+ IA      G   Y+ASK+ + G+   +
Sbjct: 116 RGAFVVLREAARHL------GQGGRIINLSTSVIALP--LPGYGPYAASKAAVEGLVHVL 167

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR--SIPAPQRLGHPDEFAQLVQSI 234
           A +L G GI VN +APG   T L    N K    + +   +   +RLG P+E A  V + 
Sbjct: 168 ANELRGRGITVNAVAPGPVATELF--FNGKSAEQIDQLAGLAPLERLGTPEEIAAAV-AF 224

Query: 235 ITNP---LINGEVIRIDG 249
           +  P    +NG+V+R++G
Sbjct: 225 LAGPDGAWVNGQVLRVNG 242

Length = 245

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 4e-31
 Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 18/203 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G + +VTGG+SG+G A V+ ++  G  VV  D+   +G+        + +F P DV+S
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------HENYQFVPTDVSS 60

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFN-YNKGTVHSLD--DFKRILLVNTVG 118
            E+V   V    + FG++D  VN AGI+    + +  +    + L+   F ++  +N  G
Sbjct: 61  AEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKG 120

Query: 119 TFNVARLSA-QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
            F +++  A Q++ ++        GVI+N +S A  EG  GQ  Y+A+K+ +   T   A
Sbjct: 121 VFLMSQAVARQMVKQHD-------GVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWA 173

Query: 178 RDLAGAGIRVNTIAPGLFD-TPL 199
           ++L    IRV  +APG+ + T L
Sbjct: 174 KELGKHNIRVVGVAPGILEATGL 196

Length = 266

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 4e-31
 Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 22/235 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE----LGPDVKFAPV 57
           L G V  VTG  SG+G+     + + G  V L DL T +G +   E     G        
Sbjct: 6   LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAA 65

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DVTS+ D++ AV   +   G L + VN AGI+      N N       + ++ ++ +N  
Sbjct: 66  DVTSKADLRAAVARTEAELGALTLAVNAAGIA------NANPAEEMEEEQWQTVMDINLT 119

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG--QVAYSASKSGIVGMTLP 175
           G F   +  A+ + EN        G I+N AS++      G  Q  Y+ASK+G++ ++  
Sbjct: 120 GVFLSCQAEARAMLENG------GGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKS 173

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPAPQRLGHPDEFA 228
           +A +  G GIRVN+I+PG   TP+ +   +  + + F     P  QR+   DE  
Sbjct: 174 LAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLF-EEQTPM-QRMAKVDEMV 226

Length = 254

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  113 bits (286), Expect = 9e-31
 Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 13/239 (5%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD-VKFAPVDV 59
            LKG V L+TG +SG+G+AT   +   G +VVL        E++A E+G        +DV
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV 62

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           T    V+ A+    + FG++D+ VN AG++    +   +      LDD+ R++  N  G 
Sbjct: 63  TDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEAD------LDDWDRMIDTNVKGL 116

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
            N  R     + E K       G IIN  SIA      G   Y A+K+ +   +L + ++
Sbjct: 117 LNGTRAVLPGMVERK------SGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQE 170

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
           LAG GIRV  I+PGL +T   S +  +  +  A  +        P++ A+ V    T P
Sbjct: 171 LAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQP 229

Length = 246

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  113 bits (285), Expect = 2e-30
 Identities = 65/201 (32%), Positives = 99/201 (49%), Gaps = 16/201 (7%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG----PDVKFAPVD 58
              V +VTGG+ G+G+  V   V  G +VV C    + G+++  EL        KF P D
Sbjct: 8   ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCD 67

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT EED++  + +  + FG++D  VN AG     +  +       S  +F+ +L +N + 
Sbjct: 68  VTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDET-----SAQEFRDLLNLNLIS 122

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F  ++ +  L H  K      +G IIN +S+    GQ     Y A+K  I  MT  +A 
Sbjct: 123 YFLASKYA--LPHLRKS-----QGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAV 175

Query: 179 DLAGAGIRVNTIAPGLFDTPL 199
           D +  G+RVN I+PG   TPL
Sbjct: 176 DESRYGVRVNCISPGNIWTPL 196

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  112 bits (283), Expect = 4e-30
 Identities = 79/268 (29%), Positives = 117/268 (43%), Gaps = 31/268 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
            LKG V L+TGG SGLG+A VER V EG +V + D    +   +  + G  V     DV 
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVR 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-----FKRILLVN 115
           S  D ++AV  C + FGKLD  +  AG      I++Y+   V   ++     F  +  +N
Sbjct: 61  SLADNERAVARCVERFGKLDCFIGNAG------IWDYSTSLVDIPEEKLDEAFDELFHIN 114

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G    A+ +   ++          G +I T S A +    G   Y+ASK  +VG+   
Sbjct: 115 VKGYILGAKAALPALYAT-------EGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQ 167

Query: 176 MARDLAGAGIRVNTIAPGLFDTPL-----LSMLNEKVRNF----LARSIPAPQRLGHPDE 226
           +A +LA   IRVN +APG   T L     L      +       + +SI        P++
Sbjct: 168 LAYELA-PHIRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPED 226

Query: 227 FAQ---LVQSIITNPLINGEVIRIDGAL 251
           +      + S   N    G VI  DG +
Sbjct: 227 YTGAYVFLASRGDNRPATGTVINYDGGM 254

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  112 bits (282), Expect = 4e-30
 Identities = 85/263 (32%), Positives = 122/263 (46%), Gaps = 24/263 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGPDVKFAPVD 58
           LK    +VTGG  G+G AT  R   EG +V + DL     E VA   +  G + +    D
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           +T  + V  AV   + + G +DV VN AG    F  F     T      ++R++ +N  G
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPF-----TKTEPPLWERLIAINLTG 114

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
             ++       + E         G I+N AS AA  G SG+  Y+A K G+V  +  MAR
Sbjct: 115 ALHMHHAVLPGMVERG------AGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAR 168

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
           + A  GI VN + PG  DT LL  +       EK+R    R+IP   RLG PD+    + 
Sbjct: 169 EHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL-GRLGQPDDLPGAIL 227

Query: 233 SIITN--PLINGEVIRIDGALRM 253
              ++    I G+V+ + G L M
Sbjct: 228 FFSSDDASFITGQVLSVSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  112 bits (281), Expect = 4e-30
 Identities = 80/256 (31%), Positives = 118/256 (46%), Gaps = 20/256 (7%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEE 63
           G V +VTGG  G+GK      +  G +VV  D+    G   A+  GP++ F   DV  E 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADET 60

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
            V+  V    +  G++DV VN A       + +        L+++ RIL VN  G + ++
Sbjct: 61  LVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSL------LLEEWDRILSVNLTGPYELS 114

Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
           R     + +NK       G IIN AS  A++ +    AY+ASK G+V +T  +A  L G 
Sbjct: 115 RYCRDELIKNK-------GRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSL-GP 166

Query: 184 GIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--LI 240
            IRVN I+PG  +T          +        PA  R+G P + A LV  +       I
Sbjct: 167 DIRVNCISPGWINTTEQQEFTAAPLTQEDHAQHPA-GRVGTPKDIANLVLFLCQQDAGFI 225

Query: 241 NGEVIRIDGAL--RMI 254
            GE   +DG +  +MI
Sbjct: 226 TGETFIVDGGMTKKMI 241

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  110 bits (276), Expect = 3e-29
 Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 28/246 (11%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           L+TG ASG+G A     + +G +V   D           +L  +  F  +D++  +D++ 
Sbjct: 9   LITGAASGIGLAQARAFLAQGAQVYGVDKQDKP------DLSGNFHFLQLDLS--DDLEP 60

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
                 D    +D+  N AGI     + +Y      SL++++ I   N   TF + R   
Sbjct: 61  LF----DWVPSVDILCNTAGI-----LDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYL 111

Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
             + E K       G+IIN  SIA++    G  AY+ASK  + G T  +A D A  GI+V
Sbjct: 112 PQMLERK------SGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQV 165

Query: 188 NTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL--INGE 243
             IAPG   TP+ +       + +++AR  P  +R   P+E A+L   + +     + G 
Sbjct: 166 FGIAPGAVKTPMTAADFEPGGLADWVARETPI-KRWAEPEEVAELTLFLASGKADYMQGT 224

Query: 244 VIRIDG 249
           ++ IDG
Sbjct: 225 IVPIDG 230

Length = 235

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  110 bits (276), Expect = 5e-29
 Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 30/271 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LK  V ++TGG   LG A    + + G +V        +G+ VAKE+   G        D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAG-------ISCAFKIFNYNKGTVHSLDD--FK 109
           V     +++A       FG +D+ +N AG                  +     LD+  ++
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPE-TEQNFFDLDEEGWE 121

Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
            +  +N  G+F    L +Q+  ++ L + G  G IIN +S+ A+   +   AYSA+K+ +
Sbjct: 122 FVFDLNLNGSF----LPSQVFGKDMLEQKG--GSIINISSMNAFSPLTKVPAYSAAKAAV 175

Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARS------IPAPQRLG 222
              T  +A + A  G+RVN IAPG F TP    +L     ++  RS       P   R G
Sbjct: 176 SNFTQWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPM-GRFG 234

Query: 223 HPDEFAQLVQSIITNP---LINGEVIRIDGA 250
            P+E    +  + +      + G VI +DG 
Sbjct: 235 KPEELLGALLFLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  108 bits (272), Expect = 1e-28
 Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 11/197 (5%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   L+TG A G+G+A  +  VREG RV + D+      + A E+GP      +DVT 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           +  + + V    D +G +D+ VN A       +F+       + + + R+  +N  GT  
Sbjct: 61  QASIDRCVAALVDRWGSIDILVNNAA------LFDLAPIVDITRESYDRLFAINVSGTLF 114

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + +  A+      +   G  G IIN AS A   G++    Y A+K+ ++ +T     +L 
Sbjct: 115 MMQAVAR-----AMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI 169

Query: 182 GAGIRVNTIAPGLFDTP 198
             GI VN IAPG+ D  
Sbjct: 170 RHGINVNAIAPGVVDGE 186

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  107 bits (270), Expect = 2e-28
 Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 32/261 (12%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL----GPDVKFA-PVDVTS 61
            +TG A GLG+A   R+  +G +V L D+  + G ++ A E+    G  V FA   DVT 
Sbjct: 3   FITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHS--LDDFKRILLVNTVGT 119
           E   Q  +    D+ G L V VN AG+           G +    LD+++R++ +N    
Sbjct: 63  EAQWQALLAQAADAMGGLSVLVNNAGVGSF--------GAIEQIELDEWRRVMAINVESI 114

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F    L  +  H            I+N +S+AA++ +    AY+ASK+ +  +T  +A D
Sbjct: 115 F----LGCK--HALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALD 168

Query: 180 LA--GAGIRVNTIAPGLFDTPLL-----SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
            A  G  +R N+I P    T ++      +  E+    LAR +P   RLG PD+ A  V 
Sbjct: 169 CARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPL-GRLGEPDDVAHAVL 227

Query: 233 SIITNP--LINGEVIRIDGAL 251
            + ++    + G  + IDG +
Sbjct: 228 YLASDESRFVTGAELVIDGGI 248

Length = 251

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 4e-28
 Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 26/252 (10%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEE 63
           G   LVTG +SG+G+A    + + G RVV      +  + +A E G +     +DV  + 
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEP--LRLDVGDDA 66

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD-DFKRILLVNTVGTFNV 122
            ++ A+     + G  D  VNCAGI          +  +      F R++ VN  G   V
Sbjct: 67  AIRAAL----AAAGAFDGLVNCAGI-------ASLESALDMTAEGFDRVMAVNARGAALV 115

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           AR  A+      +   G  G I+N +S AA  G    +AY ASK+ +  +T  +  +L  
Sbjct: 116 ARHVAR-----AMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGP 170

Query: 183 AGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
            GIRVN++ P +  TP+ +      +K    LA  IP   R    D+ A  +  ++++  
Sbjct: 171 HGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA-IPL-GRFAEVDDVAAPILFLLSDAA 228

Query: 238 PLINGEVIRIDG 249
            +++G  + +DG
Sbjct: 229 SMVSGVSLPVDG 240

Length = 245

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 5e-28
 Identities = 64/203 (31%), Positives = 93/203 (45%), Gaps = 19/203 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKEL---GPDVKFAPV 57
           L G V LVTGG  GLG A        G   +V+C     +GE+ A EL   G    F   
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVN 115
           D++  ED ++ V    ++FG+LD  VN AG++        ++GT+   S + F R   VN
Sbjct: 64  DLSDVEDCRRVVAAADEAFGRLDALVNAAGLT--------DRGTILDTSPELFDRHFAVN 115

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F + + + +L     +      G I+N  S++A+ GQ    AY ASK  +  +T  
Sbjct: 116 VRAPFFLMQEAIKL-----MRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRN 170

Query: 176 MARDLAGAGIRVNTIAPGLFDTP 198
            A  L    IRVN +  G   T 
Sbjct: 171 AAYALLRNRIRVNGLNIGWMATE 193

Length = 260

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  106 bits (266), Expect = 8e-28
 Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 25/236 (10%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESV--AKELGPDVKFAPVDVTSEED 64
           L+TGG SG+G+       + G +VV+ D+      E+    ++ G  V +   DV+  E+
Sbjct: 3   LITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKREE 62

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
           V +A    K   G + + +N AG+    K+           ++ ++   VNT+  F   +
Sbjct: 63  VYEAAKKIKKEVGDVTILINNAGVVSGKKLLE------LPDEEIEKTFEVNTLAHFWTTK 116

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA- 183
                + E         G I+  AS+A     +G   Y ASK+  VG    +  +L    
Sbjct: 117 AFLPDMLERN------HGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYG 170

Query: 184 --GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
             GI+   + P   +T +      K    L   I  P+ +       ++V++I+TN
Sbjct: 171 KPGIKTTLVCPYFINTGMFQ--GVKTPRPLLAPILEPEYVA-----EKIVRAILTN 219

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  106 bits (265), Expect = 1e-27
 Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 14/202 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G   +VTG ASG+GK     + R G  V + DL      +VA E+   G       +D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT+E+ V   +    + FG +D+ V+ AGI     I NY      S  D+K++  ++  G
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENY------SFADWKKMQAIHVDG 118

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F   +  A L H  K   D   GV+I   S+ ++E    + AY  +K G++G+   +A+
Sbjct: 119 AFLTTK--AALKHMYK---DDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAK 173

Query: 179 DLAGAGIRVNTIAPGLFDTPLL 200
           + A   +R + + PG   TPL+
Sbjct: 174 EGAKHNVRSHVVCPGFVRTPLV 195

Length = 262

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  105 bits (264), Expect = 1e-27
 Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 23/200 (11%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEG---------ESVAKELGPDVKFAPVD 58
           L+TGG+SG+GKA  + +V+EG  V++  +  SE          E+ A   G  V +   D
Sbjct: 5   LITGGSSGIGKALAKELVKEGANVII--VARSESKLEEAVEEIEAEANASGQKVSYISAD 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           ++  E+V++A     +  G  D+ VNCAGIS    +F        + ++F+R + VN  G
Sbjct: 63  LSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS-IPGLF-----EDLTAEEFERGMDVNYFG 116

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
           + NVA     L+ E +       G I+  +S AA  G  G  AY  SK  + G+   + +
Sbjct: 117 SLNVAHAVLPLMKEQR------PGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQ 170

Query: 179 DLAGAGIRVNTIAPGLFDTP 198
           +L    IRV+ + P   DTP
Sbjct: 171 ELKPYNIRVSVVYPPDTDTP 190

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  105 bits (265), Expect = 2e-27
 Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 19/204 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           L+G V ++TGG++GLG+A   R  +E  +VV+      E    VA+E+   G +      
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG 64

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           DVT E DV   +      FG LDV +N AGI         N    H  SL+D+ +++  N
Sbjct: 65  DVTVESDVVNLIQTAVKEFGTLDVMINNAGIE--------NAVPSHEMSLEDWNKVINTN 116

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G F  +R + +   E+      ++G IIN +S+         V Y+ASK G+  MT  
Sbjct: 117 LTGAFLGSREAIKYFVEH-----DIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTET 171

Query: 176 MARDLAGAGIRVNTIAPGLFDTPL 199
           +A + A  GIRVN I PG  +TP+
Sbjct: 172 LAMEYAPKGIRVNNIGPGAINTPI 195

Length = 261

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  105 bits (264), Expect = 2e-27
 Identities = 64/200 (32%), Positives = 93/200 (46%), Gaps = 15/200 (7%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
                V +VTG A G+G+A  E + REG  VV+ D+     E VAK++   G       V
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV+  +  +        +FG +D  VN A I    K+      TV   D +K+ + VN  
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKL--DLLITV-PWDYYKKFMSVNLD 119

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G     R   + + +         G I+N +S AA+   +    Y  +K G+ G+T  +A
Sbjct: 120 GALVCTRAVYKHMAKRG------GGAIVNQSSTAAWLYSN---FYGLAKVGLNGLTQQLA 170

Query: 178 RDLAGAGIRVNTIAPGLFDT 197
           R+L G  IRVN IAPG  DT
Sbjct: 171 RELGGMNIRVNAIAPGPIDT 190

Length = 250

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  106 bits (266), Expect = 2e-27
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 18/208 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LKG V ++TGG   LG A  + + R G +V + D    + E+V  E+   G +      D
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAG-------ISCAFKIFNYNKGTVHSLD--DFK 109
           V  +E +++A     + FG  D+ +N AG           F        T   LD   F+
Sbjct: 68  VLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127

Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
            +  +N +GT     L  Q+  ++ +   G  G IIN +S+ A+   +   AYSA+K+ I
Sbjct: 128 FVFDLNLLGTL----LPTQVFAKDMVGRKG--GNIINISSMNAFTPLTKVPAYSAAKAAI 181

Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDT 197
              T  +A   A  GIRVN IAPG F T
Sbjct: 182 SNFTQWLAVHFAKVGIRVNAIAPGFFLT 209

Length = 278

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 2e-27
 Identities = 80/263 (30%), Positives = 115/263 (43%), Gaps = 37/263 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           LKG V L+TGG SG+G+A      +EG  + +  L   E  +  K+     G      P 
Sbjct: 44  LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPG 103

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
           DV+ E   + AV       G+LD+ VN A        F Y + ++  +      +    N
Sbjct: 104 DVSDEAFCKDAVEETVRELGRLDILVNNAA-------FQYPQQSLEDITAEQLDKTFKTN 156

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F++ +  A L H  +         IINT SI  YEG    + YSA+K  I   T  
Sbjct: 157 IYSYFHMTK--AALPHLKQ------GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRS 208

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL--SMLNEKVRNFLARSIPAPQRLGHPDE------- 226
           +A+ L   GIRVN +APG   TPL+      EKV  F + +    QR G P+E       
Sbjct: 209 LAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNT--PMQRPGQPEELAPAYVF 266

Query: 227 FAQLVQSIITNPLINGEVIRIDG 249
            A    S IT     G+++ ++G
Sbjct: 267 LASPDSSYIT-----GQMLHVNG 284

Length = 290

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 2e-27
 Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 19/202 (9%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD--VKFAPVD 58
            LKG V L+TGG+ G+G A  E ++ EG +V +      E E  A EL     V     D
Sbjct: 3   SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAAD 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           V  E DVQ+AV     +FG LDV +  AG+      F      V   + ++++ ++  N 
Sbjct: 63  VRDEADVQRAVDAIVAAFGGLDVLIANAGVG----HF----APVEELTPEEWRLVIDTNL 114

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G F   + +   +           G IIN +S+A     +G  AY+ASK G+VG +   
Sbjct: 115 TGAFYTIKAAVPALKRGG-------GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAA 167

Query: 177 ARDLAGAGIRVNTIAPGLFDTP 198
             DL   GI+V+TI PG   T 
Sbjct: 168 MLDLRQYGIKVSTIMPGSVATH 189

Length = 237

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  104 bits (262), Expect = 3e-27
 Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 29/236 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP-DVK--FAPVD 58
           L+G   L+TG   G+G+A    + +EG  V L        ++VA+E+    VK   A  D
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNT 116
           V+  E+V  A+   K+  G +D+ +N AGIS  F       G    LD  ++++I+ VN 
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGIS-KF-------GKFLELDPAEWEKIIQVNL 116

Query: 117 VGTFNVAR-LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
           +G +   R +   +I           G IIN +S A  +G +   AYSASK G++G+T  
Sbjct: 117 MGVYYATRAVLPSMIERQ-------SGDIINISSTAGQKGAAVTSAYSASKFGVLGLTES 169

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           + +++    IRV  + P    T +   L     N        P ++  P++ A+ +
Sbjct: 170 LMQEVRKHNIRVTALTPSTVATDMAVDLGLTDGN--------PDKVMQPEDLAEFI 217

Length = 239

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  105 bits (263), Expect = 3e-27
 Identities = 81/263 (30%), Positives = 117/263 (44%), Gaps = 30/263 (11%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDL---PTSEGESVAKELGPDVKFAPVDVT 60
           G   LVTG ASG+G A    +   G  VV+ D           VA + G  V + P DVT
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
            E+++   +      FG LD+ VN AGI     I  +        +D+ RI+ V     F
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEF------PPEDWDRIIAVMLTSAF 114

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           +  R  A L H   + + G  G IIN AS         + AY A+K G++G+T  +A ++
Sbjct: 115 HTIR--AALPH---MKKQG-WGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEV 168

Query: 181 AGAGIRVNTIAPGLFDTPL-----------LSMLNEKV-RNFLARSIPAPQRLGHPDEFA 228
           A  GI VN I PG   TPL             +  E+V R  + +  P  +R    DE A
Sbjct: 169 AEHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPT-KRFVTVDEVA 227

Query: 229 QLVQSIITNPL--INGEVIRIDG 249
           +    + ++    I G+ I +DG
Sbjct: 228 ETALYLASDAAAQITGQAIVLDG 250

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 4e-27
 Identities = 74/211 (35%), Positives = 106/211 (50%), Gaps = 25/211 (11%)

Query: 1   MLKGVVGLVTGGA-SGLGKATVERIVREGGRVVLCDL-PTSEGESV---AKELGPDVKFA 55
           +L G V LVT  A +G+G AT  R + EG RVV+ D+     GE+    A ELG     A
Sbjct: 14  LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEA 73

Query: 56  -PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD----DFKR 110
              DVTSE  V   +    +  G+LDV VN AG+           G    +D    ++ R
Sbjct: 74  VVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLG----------GQTPVVDMTDDEWSR 123

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
           +L V   GTF   R  A L +   +   G  GVI+N AS+  +  Q GQ  Y+A+K+G++
Sbjct: 124 VLDVTLTGTFRATR--AALRY---MRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVM 178

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
            +T   A + A  G+R+N +AP +   P L+
Sbjct: 179 ALTRCSALEAAEYGVRINAVAPSIAMHPFLA 209

Length = 262

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 4e-27
 Identities = 68/236 (28%), Positives = 99/236 (41%), Gaps = 24/236 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA--KELGPDVKFAPVDV 59
           LK  V +VTGGASG+G A   R+  EG   V+      + E     + L P  +F  VD+
Sbjct: 5   LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDL 64

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           T +   + AV      FG++D  VN AG+       N   G     + F   L  N +  
Sbjct: 65  TDDAQCRDAVEQTVAKFGRIDGLVNNAGV-------NDGVGLEAGREAFVASLERNLIHY 117

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           + +A      +  +       RG I+N +S  A  GQ G   Y+A+K   + +T   A  
Sbjct: 118 YVMAHYCLPHLKAS-------RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVA 170

Query: 180 LAGAGIRVNTIAPGLFDTPL-------LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           LA  G+RVN + P    TPL             K+   +   IP   R+   +E A
Sbjct: 171 LAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAA-ITAKIPLGHRMTTAEEIA 225

Length = 258

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 4e-27
 Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 15/199 (7%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEED 64
           ++TG ASGLG+A   R  REG R+ L D+    GE   K L   G D  +   DV     
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
           +      C++ +G +DV VN AG++              SL+D+   + +N +G     +
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGVASGGFF------EELSLEDWDWQIAINLMGVVKGCK 117

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAG 184
               L    K       G I+N AS+A         +Y+ +K+G+V ++  +  +LA   
Sbjct: 118 AFLPLFKRQK------SGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDE 171

Query: 185 IRVNTIAPGLFDTPLLSML 203
           I V+ + P  F T LL   
Sbjct: 172 IGVHVVCPSFFQTNLLDSF 190

Length = 270

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  104 bits (261), Expect = 4e-27
 Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 23/259 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G   LVTGG  G+G A VE +   G  V  C     E +    E    G  V+ +  D
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCD 63

Query: 59  VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           V+S  + Q+ +      F GKL++ VN AG +         +   ++ +D+  I+  N  
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTNI------RKEAKDYTEEDYSLIMSTNFE 117

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             ++++RL+  L+  +        G I+  +S+A          Y A+K  +  +T  +A
Sbjct: 118 AAYHLSRLAHPLLKASG------NGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLA 171

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
            + A   IRVN +AP +  TPL+  +    E +   + R+    +R G P+E A LV  +
Sbjct: 172 CEWAKDNIRVNAVAPWVIATPLVEPVIQQKENLDKVIERT--PLKRFGEPEEVAALVAFL 229

Query: 235 I--TNPLINGEVIRIDGAL 251
                  I G++I +DG L
Sbjct: 230 CMPAASYITGQIIAVDGGL 248

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  103 bits (258), Expect = 2e-26
 Identities = 66/206 (32%), Positives = 96/206 (46%), Gaps = 16/206 (7%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVD 58
              V +V GG   LG+     +   G  V + D+ +   E VA E+    G        D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
            T+E+ V        + F ++D+ V  AGI+ + KI ++       L DF R L VN VG
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDF------ELGDFDRSLQVNLVG 114

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F  AR  ++L     +  DG++G II   S +   G      YSA+K G VG+T  +A 
Sbjct: 115 YFLCAREFSKL-----MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLAL 169

Query: 179 DLAGAGIRVNTIAPG-LFDTPLLSML 203
           DLA  GI VN++  G L  +P+   L
Sbjct: 170 DLAEHGITVNSLMLGNLLKSPMFQSL 195

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  102 bits (256), Expect = 3e-26
 Identities = 80/265 (30%), Positives = 117/265 (44%), Gaps = 32/265 (12%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFA---PVDVTSE 62
           V LVTG   G+G A  +R+V +G +V + D      ++ A +L  D   A     DV+  
Sbjct: 4   VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDR 63

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           + V  AV    D+FG L+V VN AG++    I    +      + F ++  +N  G    
Sbjct: 64  DQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITE------EQFDKVYNINVGGVI-- 115

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
                Q   E    + G  G IIN  S A   G      YS++K  + G+T   ARDLA 
Sbjct: 116 --WGIQAAQE-AFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLAS 172

Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKV------------RNFLARSIPAPQRLGHPDEFAQL 230
            GI VN  APG+  TP++  +  +V              F A+ I    RL  P++ A  
Sbjct: 173 EGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQF-AKDI-TLGRLSEPEDVANC 230

Query: 231 VQSIITNP---LINGEVIRIDGALR 252
           V S +  P    I G+ I +DG + 
Sbjct: 231 V-SFLAGPDSDYITGQTIIVDGGMV 254

Length = 256

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 5e-26
 Identities = 73/260 (28%), Positives = 109/260 (41%), Gaps = 24/260 (9%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
            L G V LVTG A GLG      +   G  V++     +  E+    L   G   +    
Sbjct: 8   SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF 67

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
           D+  EE V  A        G+LD+ VN  G          ++  +  LDD   + +L  +
Sbjct: 68  DIADEEAVAAAFARIDAEHGRLDILVNNVGAR--------DRRPLAELDDAAIRALLETD 119

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
            V    ++RL+AQ +           G II   SIA    ++G   Y A+K G+ G+   
Sbjct: 120 LVAPILLSRLAAQRMKRQG------YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRA 173

Query: 176 MARDLAGAGIRVNTIAPGLFDT-PLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
           +A +    GI  N IAPG F T    +M  +  V  +LA+  P   R G P+E A     
Sbjct: 174 LAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPL-GRWGRPEEIAGAAVF 232

Query: 234 IITN--PLINGEVIRIDGAL 251
           + +     +NG V+ +DG  
Sbjct: 233 LASPAASYVNGHVLAVDGGY 252

Length = 256

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  101 bits (253), Expect = 7e-26
 Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 30/239 (12%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD---VKFAPVDVTSEED 64
           LVTG A G+G A    +   G RV   D    +   +  +L           +DV     
Sbjct: 2   LVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSAA 61

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVGTFNV 122
           V + V   +  +G +DV VN AGI           G + SL  +D++    VNT G FNV
Sbjct: 62  VDEVVQRLEREYGPIDVLVNVAGI--------LRLGAIDSLSDEDWQATFAVNTFGVFNV 113

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           ++  +  +   +       G I+   S AA   + G  AY+ASK+ +  +T  +  +LA 
Sbjct: 114 SQAVSPRMKRRR------SGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAP 167

Query: 183 AGIRVNTIAPGLFDTPLL-SMLNEK------VRNFLAR---SIPAPQRLGHPDEFAQLV 231
            GIR N ++PG  DT +   + N++      +     +    IP   ++  P + A  V
Sbjct: 168 YGIRCNVVSPGSTDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPL-GKIAEPSDIANAV 225

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  101 bits (253), Expect = 7e-26
 Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 32/264 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFA 55
           L G V ++TG +SG+G  T     R G R+ L        E   +           +   
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILL 113
             D+T EE   + +      FG+LD+ VN AGI          KG     D  ++ +++ 
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILA--------KGGGEDQDIEEYDKVMN 112

Query: 114 VNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
           +N      + +L+   + + K       G I+N +S+A      G + Y  SK+ +   T
Sbjct: 113 LNLRAVIYLTKLAVPHLIKTK-------GEIVNVSSVAGGRSFPGVLYYCISKAALDQFT 165

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPL---LSMLNEKVRNFLAR---SIPAPQRLGHPDEF 227
              A +LA  G+RVN+++PG+  T     + M  E+   FL+R   + P   R G  DE 
Sbjct: 166 RCTALELAPKGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPL-GRPGTVDEV 224

Query: 228 AQLVQSII--TNPLINGEVIRIDG 249
           A+ +  +    +  I G+++ +DG
Sbjct: 225 AEAIAFLASDASSFITGQLLPVDG 248

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  105 bits (264), Expect = 8e-26
 Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 14/197 (7%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVDVT 60
           G + +VTG  SG+G+ T     REG  VV  D+  +  E  A+     G       VDV+
Sbjct: 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS 374

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
             + ++      +   G  D+ VN AGI  A    +       S +D+ R+L VN  G  
Sbjct: 375 DADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLD------TSAEDWDRVLDVNLWGVI 428

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           +  RL  +     ++ E G  G I+N AS AAY       AY+ SK+ ++ ++  +  +L
Sbjct: 429 HGCRLFGR-----QMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL 483

Query: 181 AGAGIRVNTIAPGLFDT 197
           A AGI V  I PG  DT
Sbjct: 484 AAAGIGVTAICPGFVDT 500

Length = 582

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  100 bits (251), Expect = 8e-26
 Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 20/240 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           V LVTG + G+G      + R+G RV L  L   E  +     G DV+  P D    ED 
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLG-LRNPEDLAALSASGGDVEAVPYDARDPEDA 60

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
           +  V   +D FG++DV V+ AGI     +   +   +           +N +       L
Sbjct: 61  RALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELE------AHFSINVIAPA---EL 111

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
           +  L+    L E G  G ++   S++     +G   YSASK  +  +   + ++    G+
Sbjct: 112 TRALL--PALREAG-SGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGV 168

Query: 186 RVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVI 245
           RV+ + PG  DTP+   L              P+ +  P + A LV+ +I  P     V 
Sbjct: 169 RVSAVCPGFVDTPMAQGLTL-------VGAFPPEEMIQPKDIANLVRMVIELPENITSVA 221

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  100 bits (252), Expect = 9e-26
 Identities = 69/197 (35%), Positives = 97/197 (49%), Gaps = 14/197 (7%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE--LGPDVKFAPVDVTS 61
           G V LVTGGASG+G A  +R+  EG  VV+ D+     E VA+    GP       DVTS
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E  VQ A       FG LD+ V+ AGI+ +  I         SL+D+ R + +N  G F 
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAET------SLEDWNRSMDINLTGHFL 114

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V+R + ++     +   G+ G I+  AS  A        AYSA+K+    +   +A +  
Sbjct: 115 VSREAFRI-----MKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGG 169

Query: 182 GAGIRVNTIAP-GLFDT 197
             GIRVNT+ P  +F  
Sbjct: 170 EDGIRVNTVNPDAVFRG 186

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 1e-25
 Identities = 79/261 (30%), Positives = 118/261 (45%), Gaps = 29/261 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G   LVTGG+ GLG    E +   G RVVL      E E  A  L   G D  +   D
Sbjct: 10  LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V  E D+++      + FG +D+ VN AG +      +      H ++ + +++ +N  G
Sbjct: 70  VADEADIERLAEETLERFGHVDILVNNAGATWGAPAED------HPVEAWDKVMNLNVRG 123

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS----GQVAYSASKSGIVGMTL 174
            F    L +Q + +  +   G  G IIN AS+A   G        +AY+ SK  ++  T 
Sbjct: 124 LF----LLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFT- 177

Query: 175 PMARDLAGA----GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEF--A 228
              R LA      GIRVN IAPG F T +     E++   L    P   RLG  ++   A
Sbjct: 178 ---RALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPL-GRLGDDEDLKGA 233

Query: 229 QLVQSIITNPLINGEVIRIDG 249
            L+ +   +  I G+++ +DG
Sbjct: 234 ALLLASDASKHITGQILAVDG 254

Length = 259

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 2e-25
 Identities = 61/200 (30%), Positives = 89/200 (44%), Gaps = 13/200 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V  +TGGA G+G AT   +   G RV + DL  +  +  A ELG  V   P+DVT 
Sbjct: 3   LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVV-GGPLDVTD 61

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
                  +   +   G +DV VN AG+       +             RIL VN  G   
Sbjct: 62  PASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTR------RILDVNVYGVIL 115

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            ++L+A  +          RG ++N AS+A      G   Y ASK  +VG T     +L 
Sbjct: 116 GSKLAAPRMVPRG------RGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELR 169

Query: 182 GAGIRVNTIAPGLFDTPLLS 201
           G G+ V+ + P   +T L++
Sbjct: 170 GTGVHVSVVLPSFVNTELIA 189

Length = 273

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 2e-25
 Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 22/237 (9%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
            L G V ++TG +SG+G+A  +   REG +VV+     +E + +  E+   G +      
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           DV  E   +  V L  + FG LD+  N AG            G V   SL+ ++  L  N
Sbjct: 63  DVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEM-------GPVAEMSLEGWRETLATN 115

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-GQSGQVAYSASKSGIVGMTL 174
               F  A+   Q+     +   G  G +I T++   +  G  G  AY+ASK+G++G+T 
Sbjct: 116 LTSAFLGAK--HQIPA---MLARG-GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQ 169

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQ 229
            +A +    GIRVN + PG  DTP+   +    +   F    + A +R+  P+E AQ
Sbjct: 170 VLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAF-VAGLHALKRMAQPEEIAQ 225

Length = 254

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 2e-25
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 23/257 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLC--DLPTSEGESVAKELGPDVKFAPVDV 59
           L G V +VTGG +GLG+     + + G  +++        E   + ++ G  V F  VD+
Sbjct: 13  LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDL 72

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           T  E  +K V    + FGK+D+ VN AG      +  Y        +D+  ++ +N    
Sbjct: 73  TKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKD------EDWNAVMDINLNSV 126

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           +++++  A+++ +         G IIN AS+ +++G     AY+ASK G+ G+T   A +
Sbjct: 127 YHLSQAVAKVMAKQG------SGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANE 180

Query: 180 LAGAGIRVNTIAPGLFDTPLLSML-NEKVRN--FLARSIPAPQRLGHPDEFAQLV---QS 233
           LA   I+VN IAPG   T   + +  +K RN   L R IPA  R G PD+         S
Sbjct: 181 LAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR-IPA-GRWGEPDDLMGAAVFLAS 238

Query: 234 IITNPLINGEVIRIDGA 250
             ++  +NG ++ +DG 
Sbjct: 239 RASD-YVNGHILAVDGG 254

Length = 258

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 99.7 bits (249), Expect = 3e-25
 Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 34/213 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVK-----FA 55
           MLKG   L+TG    +G A V+ I+  GG V+  D+       + + LG + K       
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV 60

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNK--GTVH---SLDDFKR 110
            +D+T +E +++ +    + +GK+D  VNCA        +  NK  G      SLDDF  
Sbjct: 61  ELDITDQESLEEFLSKSAEKYGKIDGAVNCA--------YPRNKDYGKKFFDVSLDDFNE 112

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI---AA-----YEGQSGQ--V 160
            L ++   +F  ++  A+   +         G ++N +SI    A     YEG S    V
Sbjct: 113 NLSLHLGSSFLFSQQFAKYFKKQG------GGNLVNISSIYGVVAPKFEIYEGTSMTSPV 166

Query: 161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
            Y+A K+GI+ +T  +A+    + IRVN ++PG
Sbjct: 167 EYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPG 199

Length = 256

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 99.1 bits (247), Expect = 5e-25
 Identities = 69/235 (29%), Positives = 102/235 (43%), Gaps = 26/235 (11%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
            G V L+T  A G+G+A      REG  V+  D+  +E +    E GP +    +DVT +
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDI--NEEKLKELERGPGITTRVLDVTDK 58

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           E V           G++DV  NCAG      I +         DD+   + +N    + +
Sbjct: 59  EQVAALA----KEEGRIDVLFNCAGFVHHGSILDCED------DDWDFAMNLNVRSMYLM 108

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            +     +   K       G IIN +S+A+  +G   +  YS +K+ ++G+T  +A D A
Sbjct: 109 IKAVLPKMLARK------DGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFA 162

Query: 182 GAGIRVNTIAPGLFDTPLL------SMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
             GIR N I PG  DTP L          E+     A   P   RL  P+E A L
Sbjct: 163 QQGIRCNAICPGTVDTPSLEERIQAQPDPEEALKAFAARQPL-GRLATPEEVAAL 216

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 98.7 bits (246), Expect = 8e-25
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 30/263 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLC-----DLPTSEGESVAKELGPDVKFAP 56
           L G   L+TG + G+G A     +  G  V++       L  +  E   +    +V    
Sbjct: 7   LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLA 66

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DV+ +ED +  +   +D +  L + VN AG +      +Y      + D+++ I   N 
Sbjct: 67  ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDY------TEDEWRGIFETNL 120

Query: 117 VGTFNVARLSAQL--IHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
              F ++R +  L   H +          I+N  S++          Y  +K+ ++ MT 
Sbjct: 121 FSAFELSRYAHPLLKQHAS--------SAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTR 172

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLS-MLN--EKVRNFLARSIPAP-QRLGHPDEFAQL 230
            +A + A  GIRVN +AP    TPL S  L+  +     + R+   P +R+G P+E A  
Sbjct: 173 NLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERT---PMRRVGEPEEVAAA 229

Query: 231 VQ--SIITNPLINGEVIRIDGAL 251
           V    +     I G+ I +DG  
Sbjct: 230 VAFLCMPAASYITGQCIAVDGGF 252

Length = 257

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 98.9 bits (247), Expect = 8e-25
 Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 16/202 (7%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAP 56
            +KG   L+TG +SG+G    +++ R G  ++L      + E++AKEL    G +V+  P
Sbjct: 3   PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIP 62

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            D++  E +++     K+  G +DV VN AG    F  F        SLD+ + ++ +N 
Sbjct: 63  ADLSDPEALERLEDELKERGGPIDVLVNNAGFG-TFGPFLE-----LSLDEEEEMIQLNI 116

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           +    + +     + E         G IIN  S A          YSA+K+ ++  +  +
Sbjct: 117 LALTRLTKAVLPGMVERG------AGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEAL 170

Query: 177 ARDLAGAGIRVNTIAPGLFDTP 198
             +L G G++V  + PG   T 
Sbjct: 171 REELKGTGVKVTAVCPGPTRTE 192

Length = 265

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 96.1 bits (240), Expect = 8e-25
 Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 27/186 (14%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK------ELGPDVKFAPV 57
           G V L+TGG  GLG A    +  EG R ++           A+       LG +V  A  
Sbjct: 1   GTV-LITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAAC 59

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVN 115
           DV   + +   +     + G LD  V+ AG+         + G +  L  + F+R+L   
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVL--------DDGPLEELTPERFERVLAPK 111

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G +N+  L+           D   G  +  +S+A   G  GQ  Y+A+ + +  +   
Sbjct: 112 VTGAWNLHELTR----------DLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEH 161

Query: 176 MARDLA 181
              +  
Sbjct: 162 RRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 97.7 bits (243), Expect = 2e-24
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 17/256 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG + G+G+     +  +G  V L      + E++A ELG  VK  P +++ 
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD-DFKRILLVNTVGTF 120
            ++V+      +     +D+ VN AGI+        +   V   D D+  +L VN   TF
Sbjct: 64  RDEVKALGQKAEADLEGVDILVNNAGIT-------KDGLFVRMSDEDWDSVLEVNLTATF 116

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              RL+ +L H       G    IIN  S+    G  GQ  Y ASK+G++G +  +A+++
Sbjct: 117 ---RLTRELTHPMMRRRYGR---IINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEI 170

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--P 238
           A   + VN +APG  ++ +   LN+K +  +  +IP  +R+G   E A  V  + ++   
Sbjct: 171 ATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPM-KRMGTGAEVASAVAYLASSEAA 229

Query: 239 LINGEVIRIDGALRMI 254
            + G+ I ++G + MI
Sbjct: 230 YVTGQTIHVNGGMAMI 245

Length = 245

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 97.7 bits (244), Expect = 2e-24
 Identities = 71/237 (29%), Positives = 104/237 (43%), Gaps = 39/237 (16%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP-DVKFAPVDVTSEEDVQ 66
            +TG ASG+G+AT      EG RV   D+  +   ++A ELG  +     +DVT      
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWD 64

Query: 67  KAVL-LCKDSFGKLDVNVNCAGI--SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
            A+      + G+LDV  N AGI     F            L+   R++ +N  G  N A
Sbjct: 65  AALADFAAATGGRLDVLFNNAGILRGGPF--------EDIPLEAHDRVIDINVKGVLNGA 116

Query: 124 RLSAQLIHENKLNEDGLR----GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
              A L +        L+      +INT+S +A  GQ G   YSA+K  + G+T   A D
Sbjct: 117 H--AALPY--------LKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT--EALD 164

Query: 180 L--AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLG---HPDEFAQLV 231
           L     GIRV  + P   DT +L   + +V         + +RLG    P++ A+ V
Sbjct: 165 LEWRRHGIRVADVMPLFVDTAMLDGTSNEVD------AGSTKRLGVRLTPEDVAEAV 215

Length = 260

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 97.6 bits (243), Expect = 2e-24
 Identities = 75/262 (28%), Positives = 117/262 (44%), Gaps = 28/262 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G   L+TG   G+G+       R G  ++L D+ + E E +A EL   G        D
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDI-SPEIEKLADELCGRGHRCTAVVAD 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V     V  A+   K+  G++D+ VN AG+ C    F        S +D    + +N  G
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGV-CRLGSF-----LDMSDEDRDFHIDINIKG 116

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPMA 177
            +NV +     +   K       G I+  +S+        G+ AY+ +K+ IVG+T  +A
Sbjct: 117 VWNVTKAVLPEMIARK------DGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLA 170

Query: 178 RDLAGAGIRVNTIAPGLFDTPLL-SMLN-------EKVRNFLARSIPAPQRLGHPDEFAQ 229
            + A +GIRVN I PG   TP+  S+         E V   +A++IP  +RL  P E  +
Sbjct: 171 VEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL-RRLADPLEVGE 229

Query: 230 LVQSIITN--PLINGEVIRIDG 249
           L   + ++    + G    IDG
Sbjct: 230 LAAFLASDESSYLTGTQNVIDG 251

Length = 263

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 97.2 bits (242), Expect = 2e-24
 Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 13/198 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKELGPDVKFAPVDVT 60
           L+G V  +TGG  GLG+AT   +   G RV L     +   +++       ++   +D+ 
Sbjct: 5   LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLV 64

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
             +  ++AV      FG+LD  VN AG       F +        D + R+  VN   T 
Sbjct: 65  DPQAARRAVDEVNRQFGRLDALVNIAGA------FVWGTIADGDADTWDRMYGVNVKTTL 118

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           N ++  A L     L   G  G I+N  + AA +   G  AY+A+K+G+  +T  +A +L
Sbjct: 119 NASK--AALPA---LTASG-GGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAEL 172

Query: 181 AGAGIRVNTIAPGLFDTP 198
              GI VN + P + DTP
Sbjct: 173 LDRGITVNAVLPSIIDTP 190

Length = 239

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  100 bits (251), Expect = 4e-24
 Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 16/196 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFA-P 56
           L   V  VTGGA G+G+ T  R+  EG  VVL DL     E+VA E+    G     A  
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALK 471

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           +DVT E+ V+ A      ++G +D+ VN AGI+ +       + T  +L +++  L +  
Sbjct: 472 MDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPF----EET--TLQEWQLNLDILA 525

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G F VAR + +      + E GL G I+  AS  A        AYSA+K+    +   +
Sbjct: 526 TGYFLVAREAFRQ-----MREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCL 580

Query: 177 ARDLAGAGIRVNTIAP 192
           A +    GIRVNT+ P
Sbjct: 581 AAEGGTYGIRVNTVNP 596

Length = 676

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 96.5 bits (240), Expect = 5e-24
 Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 16/196 (8%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEE 63
           G V LVTG A G+G      ++ EG +VVL DL    G  VAK LG +  F  +DV  E 
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEA 69

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNTVGTFN 121
            V   V      FG+LD  V  A I+      + +  T+ SL    + R+L VN  G   
Sbjct: 70  QVAAGVAEVLGQFGRLDALVCNAAIA------DPHNTTLESLSLAHWNRVLAVNLTGPML 123

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +A+  A  +  +        G I+N AS  A + +    AY+ASK G++ +T  +A  L 
Sbjct: 124 LAKHCAPYLRAH-------NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISL- 175

Query: 182 GAGIRVNTIAPGLFDT 197
           G  IRVN ++PG  D 
Sbjct: 176 GPEIRVNAVSPGWIDA 191

Length = 255

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 96.1 bits (239), Expect = 8e-24
 Identities = 77/249 (30%), Positives = 112/249 (44%), Gaps = 31/249 (12%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KEL---GPDVKFAPVDV 59
           V LVTG  SG+G A   R+ +EG RV +C       E +A   KEL   G +      DV
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVC---ARGEEGLATTVKELREAGVEADGRTCDV 61

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
            S  +++  V      +G +DV VN AG S          G    L D   + +V T  T
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNNAGRS--------GGGATAELADELWLDVVETNLT 113

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
             V R++ +++    + E G  G IIN AS    +G      YSASK G+VG T  +  +
Sbjct: 114 -GVFRVTKEVLKAGGMLERG-TGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLE 171

Query: 180 LAGAGIRVNTIAPGLFDTPL-----------LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           LA  GI VN + PG  +TP+             +  E+  + +   +P   R   P+E A
Sbjct: 172 LARTGITVNAVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPL-GRYVTPEEVA 230

Query: 229 QLVQSIITN 237
            +V  +I +
Sbjct: 231 GMVAYLIGD 239

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 95.9 bits (239), Expect = 9e-24
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPV--D 58
           +  + L+TG A  +GKA  + ++  G R++L D+     E + +EL      +   +  D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYN-KGTVHSLDDFKRILLVNTV 117
           +TS+E +++ +    + FG++D+ +N A  S       +  +      + +  +L VN  
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPS----PKVWGSRFEEFPYEQWNEVLNVNLG 116

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA--------YEGQSGQ--VAYSASKS 167
           G F  ++   +L  +        +G IIN ASI          YE       V YS  K+
Sbjct: 117 GAFLCSQAFIKLFKKQG------KGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKA 170

Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPG 193
           GI+ +T  +A+  A  GIRVN I+PG
Sbjct: 171 GIIHLTKYLAKYYADTGIRVNAISPG 196

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 95.5 bits (237), Expect = 1e-23
 Identities = 73/230 (31%), Positives = 118/230 (51%), Gaps = 17/230 (7%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE----SVAKELGPDVKFAPVDVTS 61
           +  VTGG  G+G +  +R+ ++G +VV    P S          K LG D   +  +V  
Sbjct: 5   IAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD 64

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            +  + A    K   G++DV VN AGI+   +   + K T    +D+  ++  N    FN
Sbjct: 65  WDSTKAAFDKVKAEVGEIDVLVNNAGIT---RDVVFRKMT---REDWTAVIDTNLTSLFN 118

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V +   Q+I  + + E G  G IIN +S+   +GQ GQ  YS +K+GI G T+ +A+++A
Sbjct: 119 VTK---QVI--DGMVERGW-GRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA 172

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
             G+ VNT++PG   T ++  +   V   +  +IP  +RLG PDE   +V
Sbjct: 173 TKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPV-RRLGSPDEIGSIV 221

Length = 246

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 95.1 bits (237), Expect = 2e-23
 Identities = 68/205 (33%), Positives = 98/205 (47%), Gaps = 29/205 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL---------PTSEGESVAKELGPDV 52
             G V LVTG   GLG+A        G +VV+ DL          +S  + V  E+    
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAG 62

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGI----SCAFKIFNYNKGTVHSLDDF 108
             A  +  S ED +K V    D+FG++D+ VN AGI    S A K+         S +D+
Sbjct: 63  GKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFA-KM---------SEEDW 112

Query: 109 KRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSG 168
             ++ V+  G+F V R +   + + K       G IINT+S A   G  GQ  YSA+K G
Sbjct: 113 DLVMRVHLKGSFKVTRAAWPYMRKQK------FGRIINTSSAAGLYGNFGQANYSAAKLG 166

Query: 169 IVGMTLPMARDLAGAGIRVNTIAPG 193
           ++G++  +A + A   I  NTIAP 
Sbjct: 167 LLGLSNTLAIEGAKYNITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 95.1 bits (237), Expect = 2e-23
 Identities = 80/266 (30%), Positives = 124/266 (46%), Gaps = 51/266 (19%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG-PDVKFAPV--DVTSEED 64
           ++TGG+SG+GKA  +R   EG  VV+      + E    E+     +   V  DV + ED
Sbjct: 5   IITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPED 64

Query: 65  VQKAVLLCKDSFGKLDVNVNCAG---ISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           VQK V    + FG++D  +N A    I  A  +         S++ +  ++ +   GTF 
Sbjct: 65  VQKMVEQIDEKFGRIDALINNAAGNFICPAEDL---------SVNGWNSVIDIVLNGTFY 115

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS-KSGIVGMTLPMARDL 180
            ++            E G++G IIN  +  A++   G V +SA+ K+G++ MT    R L
Sbjct: 116 CSQAVG-----KYWIEKGIKGNIINMVATYAWDAGPG-VIHSAAAKAGVLAMT----RTL 165

Query: 181 A---GA--GIRVNTIAPG----------LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD 225
           A   G   GIRVN IAPG          L+        +E+      +S+P   RLG P+
Sbjct: 166 AVEWGRKYGIRVNAIAPGPIERTGGADKLW-------ESEEAAKRTIQSVPL-GRLGTPE 217

Query: 226 EFAQLVQSIITN--PLINGEVIRIDG 249
           E A L   ++++    ING  I +DG
Sbjct: 218 EIAGLAYFLLSDEAAYINGTCITMDG 243

Length = 252

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 96.0 bits (239), Expect = 2e-23
 Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKE---LGPDVKFAPV 57
           L G V +VTG A+GLG+A    + R G  VV+ D+    +   V  E    G        
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+ S+      ++      G LD+ VN AGI+    +FN       S +++  ++ V+  
Sbjct: 70  DI-SQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNM------SDEEWDAVIAVHLR 122

Query: 118 GTFNVARLSAQLIHENKLNEDG-LRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           G F + R +A           G + G I+NT+S A   G  GQ  Y A+K+GI  +TL  
Sbjct: 123 GHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSA 182

Query: 177 ARDLAGAGIRVNTIAP 192
           AR L   G+R N I P
Sbjct: 183 ARALGRYGVRANAICP 198

Length = 306

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.9 bits (236), Expect = 2e-23
 Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 25/258 (9%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD-VKFAPVDV 59
             KG V L+TGG  G+G+A  E  +REG +V +     +  E+ AKEL    V     DV
Sbjct: 4   RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVL---YNSAENEAKELREKGVFTIKCDV 60

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
            + + V+K+  + +  FG++DV VN AGI        +++      + + +++ +N  G 
Sbjct: 61  GNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDE------EKYNKMIKINLNGA 114

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQSGQVAYSASKSGIVGMTLPMAR 178
                    L+  +K       G I+N AS A       G   Y+ +K+GI+ +T  +A 
Sbjct: 115 IYTTYEFLPLLKLSK------NGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAF 168

Query: 179 DLAGAGIRVNTIAPGLFDTPL-LSMLN----EKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
           +L   GIRVN +APG  +T + LS  +    EK+R  L R+    +  G P++ A +V  
Sbjct: 169 ELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRE-LFRNKTVLKTTGKPEDIANIVLF 227

Query: 234 IITNP--LINGEVIRIDG 249
           + ++    I G+VI  DG
Sbjct: 228 LASDDARYITGQVIVADG 245

Length = 255

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 94.3 bits (235), Expect = 4e-23
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 17/196 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V ++TG + G+G+A   R+ R G ++VL     +   S+A+EL   G +    P DV+  
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDA 62

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           E  ++ +      FG +D+ VN AGI+  +  F+     +  L  F+R++ VN +G    
Sbjct: 63  EACERLIEAAVARFGGIDILVNNAGIT-MWSRFD----ELTDLSVFERVMRVNYLGAVYC 117

Query: 123 ARLS-AQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
              +   L           RG I+  +S+A   G   +  Y+ASK  + G    +  +LA
Sbjct: 118 THAALPHLKAS--------RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELA 169

Query: 182 GAGIRVNTIAPGLFDT 197
             G+ V  + PG   T
Sbjct: 170 DDGVAVTVVCPGFVAT 185

Length = 263

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 93.8 bits (233), Expect = 6e-23
 Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 18/231 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGPDVKFAPVD 58
           L G   ++TG  +G+GK         G  VV+ D+       V    ++LG        D
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           +TSE+++           GK+D+ VN AG     K F+        + DF+R   +N   
Sbjct: 69  ITSEQELSALADFALSKLGKVDILVNNAG-GGGPKPFDM------PMADFRRAYELNVFS 121

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F++++L A  + +N        GVI+   S+AA        +Y++SK+    +   MA 
Sbjct: 122 FFHLSQLVAPEMEKNG------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAF 175

Query: 179 DLAGAGIRVNTIAPGLFDT-PLLSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           DL    IRVN IAPG   T  L S++  ++   + +  P  +RLG P + A
Sbjct: 176 DLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI-RRLGQPQDIA 225

Length = 255

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 93.2 bits (232), Expect = 7e-23
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 15/195 (7%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG---PDVKFAPVDVTSEED 64
           L+TG +SG+G+A      + G  V L    T   + +  EL    P V+   +DVT EE 
Sbjct: 2   LITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEER 61

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
            Q  +   +   G LD+ +  AG+               S   F+  +  N +G   +  
Sbjct: 62  NQLVIAELEAELGGLDLVIINAGVGKG------TSLGDLSFKAFRETIDTNLLGAAAILE 115

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAG 184
            +              RG ++  +S+AA  G  G  AYSASK+ +  +   +  D+   G
Sbjct: 116 AALPQFRAKG------RGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRG 169

Query: 185 IRVNTIAPGLFDTPL 199
           IRV  I PG  DTPL
Sbjct: 170 IRVTVINPGFIDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 92.9 bits (231), Expect = 1e-22
 Identities = 76/256 (29%), Positives = 119/256 (46%), Gaps = 14/256 (5%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG--ESVA--KELGPDVKFAPVDVTS 61
           V +VTG + G+G+A    +   G  + + DLP  +   E VA     G    +   D+  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVGT 119
             D +  +    + FG+LD  VN AGI+         +G +  L  D F R++ +N  G 
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVR------PRGDLLDLTEDSFDRLIAINLRGP 116

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F + +  A+ + E     DG    II   SI AY     +  Y  SK+G+   T  +A  
Sbjct: 117 FFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYR 176

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
           LA  GI V+ I PGL  T + + + EK    +A  +   +R G P++ A+ V+++ +   
Sbjct: 177 LADEGIAVHEIRPGLIHTDMTAPVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLASGLL 236

Query: 238 PLINGEVIRIDGALRM 253
           P   G+ I IDG L M
Sbjct: 237 PYSTGQPINIDGGLSM 252

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 93.8 bits (234), Expect = 1e-22
 Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 30/227 (13%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG--ESVAKEL---GPDVKFA 55
            +   V ++TG ++G+G+AT     R G +VVL  L   E   E++A E+   G +    
Sbjct: 5   PIGRQVVVITGASAGVGRATARAFARRGAKVVL--LARGEEGLEALAAEIRAAGGEALAV 62

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILL 113
             DV   E VQ A    ++  G +D  VN A ++    +F    G     + ++F+R+  
Sbjct: 63  VADVADAEAVQAAADRAEEELGPIDTWVNNAMVT----VF----GPFEDVTPEEFRRVTE 114

Query: 114 VNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
           V  +G  +     A L H    +    RG II   S  AY     Q AY A+K  I G T
Sbjct: 115 VTYLGVVHGTL--AALRHMRPRD----RGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFT 168

Query: 174 LPMARDL--AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAP 218
             +  +L   G+ + V  + P   +TP      +  R+ L    P P
Sbjct: 169 DSLRCELLHDGSPVSVTMVQPPAVNTP----QFDWARSRLPVE-PQP 210

Length = 334

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 91.9 bits (229), Expect = 2e-22
 Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 19/196 (9%)

Query: 6   VGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTS 61
           V LVTG   G+G   V ++ + G G V+L       G++  ++L   G  V+F  +DVT 
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           +  ++ A    ++ +G LD+ VN AGI  AFK F+ +  T    +  +  +  N  GT +
Sbjct: 62  DASIEAAADFVEEKYGGLDILVNNAGI--AFKGFDDSTPTR---EQARETMKTNFFGTVD 116

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V +    L+ ++        G I+N +S       S   AY  SK+ +  +T  +A++L 
Sbjct: 117 VTQALLPLLKKSP------AGRIVNVSSGLG----SLTSAYGVSKAALNALTRILAKELK 166

Query: 182 GAGIRVNTIAPGLFDT 197
             GI+VN   PG   T
Sbjct: 167 ETGIKVNACCPGWVKT 182

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 92.5 bits (230), Expect = 2e-22
 Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 17/202 (8%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-----SEGESVAKELGPDVKFAPV 57
           KG V LVTG  SG+G      +   G  +VL          +    +A + G  V +   
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D++    ++  V   +  FG +D+ VN AGI     I ++        + +  I+ +N  
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDF------PTEKWDAIIALNLS 114

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             F+  RL+  L H  K       G IIN AS+      + + AY A+K G+VG+T  +A
Sbjct: 115 AVFHTTRLA--LPHMKKQG----WGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVA 168

Query: 178 RDLAGAGIRVNTIAPGLFDTPL 199
            + AG G+  N I PG   TPL
Sbjct: 169 LETAGTGVTCNAICPGWVLTPL 190

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 91.8 bits (228), Expect = 2e-22
 Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 12/190 (6%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTG + G+G+AT   +  EG RV +C    +   + A +    V     DV  E DV++
Sbjct: 4   LVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLAGDVRDEADVRR 63

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
           AV   +++FG LD  VN AG+     +         + ++++ +L  N  G F     +A
Sbjct: 64  AVDAMEEAFGGLDALVNNAGVGVMKPVEEL------TPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
             +           G I+N  S+A      G  AY+ASK G++G++     DL  A IRV
Sbjct: 118 PALLRRG------GGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRV 171

Query: 188 NTIAPGLFDT 197
             + PG  DT
Sbjct: 172 VNVMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 92.6 bits (230), Expect = 2e-22
 Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 33/231 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL------------PTSE--GESVA-- 45
           L+G V  +TG A G G+A   R+  EG  ++  DL             T E   E+    
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 46  KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
           + LG  V     DV    +V+  V    + FG+LDV V  AG+         + G    L
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVL--------SYGRSWEL 112

Query: 106 DD--FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS 163
            +  +  +L +N  G +   +  A + H   + E G  G II T+S+A  +   G   Y+
Sbjct: 113 SEEQWDTVLDINLTGVWRTCK--AVVPH---MIERGNGGSIIITSSVAGLKALPGLAHYA 167

Query: 164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS 214
           A+K G+VG+T  +A +LA  GIRVN+I P   DTP+++   E +R    + 
Sbjct: 168 AAKHGLVGLTKTLANELAEYGIRVNSIHPYSVDTPMIA--PEAMREAFLKY 216

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 92.0 bits (229), Expect = 2e-22
 Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 16/230 (6%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKE---LGPDVKFAPVDVTS 61
           V +VT   SG+GKA    + ++G  + +      EG +  A+E    G   +   +D++ 
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             +  +A+       G++DV VN AG        +         D++++I  V+  G F 
Sbjct: 64  LPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDM------DFDEWRKIFTVDVDGAFL 117

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            ++++A+      + + G  G IIN  S+  +    G  AY+A+K  + G+T  MA +L 
Sbjct: 118 CSQIAAR-----HMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELV 172

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
             GI VN +APG   TP+  M +  V+      IP   R G   E A LV
Sbjct: 173 EHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLG-RPGDTHEIASLV 221

Length = 256

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 91.3 bits (227), Expect = 3e-22
 Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 22/218 (10%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGPDVKFAPVDVTSE 62
           V ++TG +SG+G+AT       G +VVL          +A   +ELG +      DV   
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
             V++A     + FG++D  VN AG++   +  +          +F+R+  VN +G    
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPE------EFRRVFDVNYLGHVYG 115

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT--LPMARDL 180
               A L H  +       G +IN  S+  Y     Q AYSASK  + G T  L      
Sbjct: 116 TL--AALPHLRRRGG----GALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAH 169

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAP 218
            GA I V  + P   +TP         R+++ +  P P
Sbjct: 170 DGAPISVTLVQPTAMNTP----FFGHARSYMGKK-PKP 202

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 91.8 bits (228), Expect = 3e-22
 Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 28/261 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G   LVTG + G+G A  E + + G  V+L     ++  + A+ L   G        D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT  + V+ A+   +   G +D+ VN AG+     + ++        D F+R+L  N   
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDF------PADAFERLLRTNISS 121

Query: 119 TFNVARLSAQ-LIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
            F V +  A+ +I           G IIN AS+ +   + G   Y+A+K  +  +T  MA
Sbjct: 122 VFYVGQAVARHMIARG-------AGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMA 174

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            D A  G++ N IAPG FDTPL + L  + +   +L +  PA  R G  +E   LV + +
Sbjct: 175 TDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPA-GRWGKVEE---LVGACV 230

Query: 236 -----TNPLINGEVIRIDGAL 251
                 +  +NG V+ +DG +
Sbjct: 231 FLASDASSFVNGHVLYVDGGI 251

Length = 255

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 92.2 bits (229), Expect = 4e-22
 Identities = 73/260 (28%), Positives = 115/260 (44%), Gaps = 25/260 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGES-----VAKELGPDVKFAP 56
           L+G   L+TG  SG+G+AT     REG  + L  LP  E ++     + +  G      P
Sbjct: 53  LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            D+  E   ++ V       G LD+ VN AG   A K    +   + + + F      N 
Sbjct: 113 GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVK----DIADI-TTEQFDATFKTNV 167

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              F + + +   +             IINT SI +Y+     + Y+++K+ IV  T  +
Sbjct: 168 YAMFWLCKAAIPHLPPG--------ASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKAL 219

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLL---SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
           A+ +A  GIRVN +APG   TPL        EK+ +F + +    +R G P E A L   
Sbjct: 220 AKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSET--PMKRPGQPVEMAPLYVL 277

Query: 234 IIT--NPLINGEVIRIDGAL 251
           + +  +  + GEV  + G L
Sbjct: 278 LASQESSYVTGEVFGVTGGL 297

Length = 300

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 91.2 bits (227), Expect = 4e-22
 Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 19/257 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G + LVTG + G+G+A  + + ++G  V++        ++VA  +   G   +     
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           +   E +       ++  G+LD+ VN A    A   F +   T   L  F++ + VN  G
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAA---ANPYFGHILDT--DLGAFQKTVDVNIRG 120

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F ++  + +L+ E         G I+N AS+        Q  YS +K+ ++ MT   A+
Sbjct: 121 YFFMSVEAGKLMKEQG------GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAK 174

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           + A  GIRVN + PGL DT   S L  N+ +       IP  +R   P E A  V  + +
Sbjct: 175 ECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL-RRHAEPSEMAGAVLYLAS 233

Query: 237 N--PLINGEVIRIDGAL 251
           +      GE + +DG  
Sbjct: 234 DASSYTTGECLNVDGGY 250

Length = 252

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 91.1 bits (227), Expect = 4e-22
 Identities = 65/245 (26%), Positives = 97/245 (39%), Gaps = 37/245 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFA--PVD 58
              G    VTG A G+G A     V  G +V+  D      E        D  FA   +D
Sbjct: 5   DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE--------DYPFATFVLD 56

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNT 116
           V+    V +         G LDV VN AGI           G   SL  +D+++   VN 
Sbjct: 57  VSDAAAVAQVCQRLLAETGPLDVLVNAAGI--------LRMGATDSLSDEDWQQTFAVNA 108

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G FN+ R         +       G I+   S AA+  + G  AY ASK+ +  +   +
Sbjct: 109 GGAFNLFRAVMPQFRRQR------SGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCV 162

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLL-SMLNEK------VRNFLAR---SIPAPQRLGHPDE 226
             +LA  G+R N ++PG  DT +  ++  ++      +  F  +    IP   ++  P E
Sbjct: 163 GLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL-GKIARPQE 221

Query: 227 FAQLV 231
            A  V
Sbjct: 222 IANAV 226

Length = 252

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 89.5 bits (222), Expect = 1e-21
 Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 15/240 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G V LVTG +SG+G+AT   +  EG  V +        E++A EL   G       +D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT E+ V  AV    ++ G+LD+ VN AGI     + + +        D+ R++  N +G
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTT------DWTRMIDTNLLG 114

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
                   A L H    N    +G I+N +S+A          Y+A+K G+   +  + +
Sbjct: 115 LMYTTH--AALPHHLLRN----KGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQ 168

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
           ++   G+RV  I PG  DT L   +   +         +  R    ++ A  V+  +T P
Sbjct: 169 EVTERGVRVVVIEPGTVDTELRDHITHTITKEAYEERISTIRKLQAEDIAAAVRYAVTAP 228

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 89.8 bits (223), Expect = 2e-21
 Identities = 68/203 (33%), Positives = 100/203 (49%), Gaps = 19/203 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           LKG V LVTGGASGLG+A V+R V EG RV + D   +  + +    G  V     DV S
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-----FKRILLVNT 116
            +D ++AV  C  +FGK+D  +  AG      I++Y+   V   DD     F  +  +N 
Sbjct: 63  LDDHKEAVARCVAAFGKIDCLIPNAG------IWDYSTALVDIPDDRIDEAFDEVFHINV 116

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G     + +   +  +       RG +I T S A +    G   Y+A+K  +VG+   +
Sbjct: 117 KGYLLAVKAALPALVAS-------RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKEL 169

Query: 177 ARDLAGAGIRVNTIAPGLFDTPL 199
           A +LA   +RVN +APG   + L
Sbjct: 170 AFELA-PYVRVNGVAPGGMSSDL 191

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 89.6 bits (223), Expect = 2e-21
 Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 15/196 (7%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPV 57
           +LKG V +V+G   GLG+    R  R G  VVL        + VA E   LG      P 
Sbjct: 2   LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPT 61

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+T E+     V L  + FG++D  VN A     F++ +           ++ ++ +N +
Sbjct: 62  DITDEDQCANLVALALERFGRVDALVNNA-----FRVPSMKPLADADFAHWRAVIELNVL 116

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           GT  + +     + E+        G I+   S+     Q    AY  +K  ++  +  +A
Sbjct: 117 GTLRLTQAFTPALAESG-------GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLA 169

Query: 178 RDLAGAGIRVNTIAPG 193
            +L   GIRVN++APG
Sbjct: 170 TELGPQGIRVNSVAPG 185

Length = 258

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 88.7 bits (220), Expect = 2e-21
 Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 31/231 (13%)

Query: 9   VTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD-VKFAPVDVTSEEDVQK 67
           +TG ASG+G+ T     R G  V L D+      ++A ELG + V    +DVT       
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRAAWAA 64

Query: 68  AVL-LCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTFNVAR 124
           A+      + G+LD   N AG+           G      L    R++ +N  G  N A 
Sbjct: 65  ALADFAAATGGRLDALFNNAGVGRG--------GPFEDVPLAAHDRMVDINVKGVLNGAY 116

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAG 184
            +   +      +      +INTAS +A  GQ     YSA+K  + G+T  +  + A  G
Sbjct: 117 AALPYL------KATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHG 170

Query: 185 IRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLG----HPDEFAQLV 231
           IRV  + P   DTP+L+            +  AP++         + A++V
Sbjct: 171 IRVADVWPWFVDTPILTK---------GETGAAPKKGLGRVLPVSDVAKVV 212

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 88.5 bits (220), Expect = 3e-21
 Identities = 67/248 (27%), Positives = 102/248 (41%), Gaps = 22/248 (8%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA-----KELGPDVKFAPVDVTSE 62
           LVTG A  +G+A  E +  EG RVV+     SE E+         L         D++  
Sbjct: 4   LVTGAAKRIGRAIAEALAAEGYRVVV-HYNRSEAEAQRLKDELNALRNSAVLVQADLSDF 62

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
                 V     +FG+ DV VN A        F        S D +  +  +N    + +
Sbjct: 63  AACADLVAAAFRAFGRCDVLVNNASA------FYPTPLGQGSEDAWAELFGINLKAPYLL 116

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            +  A+ +           G IIN          +G  AY  SK+ + G+T   A +LA 
Sbjct: 117 IQAFARRLAG------SRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELA- 169

Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLING 242
             IRVN IAPGL    L   ++ + R    R +P  +R    +E A  V  ++ +  I G
Sbjct: 170 PNIRVNGIAPGL--ILLPEDMDAEYRENALRKVPL-KRRPSAEEIADAVIFLLDSNYITG 226

Query: 243 EVIRIDGA 250
           ++I++DG 
Sbjct: 227 QIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 89.0 bits (221), Expect = 3e-21
 Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 17/231 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKELGPDVKFAPVDVT 60
           L+G V LVTG  +GLG+     +   G  +V       SE +   + LG        D++
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLS 62

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
             E ++  V    + FG +D+ VN AGI               S  D+  ++ VN    F
Sbjct: 63  DIEAIKALVDSAVEEFGHIDILVNNAGI------IRRADAEEFSEKDWDDVMNVNLKSVF 116

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
            + + +A         + G  G IIN AS+ +++G     +Y+ASK  + G+T  +A + 
Sbjct: 117 FLTQAAA-----KHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEW 171

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLN-EKVRN--FLARSIPAPQRLGHPDEFA 228
           A  GI VN IAPG   T     L  ++ RN   L R IPA  R G PD+  
Sbjct: 172 AAKGINVNAIAPGYMATNNTQALRADEDRNAAILER-IPA-GRWGTPDDIG 220

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 88.7 bits (220), Expect = 4e-21
 Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 18/256 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDV 59
           + G + LVTGG+ G+G+   +  +  G RV++           A+EL    +    P D+
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADL 63

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNY-NKGTVHSLDDFKRILLVNTVG 118
           +SEE ++  V    +   +LDV VN AG +    +  +   G       + +++ +N   
Sbjct: 64  SSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESG-------WDKVMDINVKS 116

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMTLPMA 177
            F + +    L+      E+  R  +IN  SIA       +  +Y ASK+ +  +T  +A
Sbjct: 117 VFFLTQALLPLLRAAATAENPAR--VINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLA 174

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           ++LAG  I VN IAPG F + + + L  +        +SIP   R G P++ A L   + 
Sbjct: 175 KELAGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPL-GRWGRPEDMAGLAIMLA 233

Query: 236 T--NPLINGEVIRIDG 249
           +     + G VI +DG
Sbjct: 234 SRAGAYLTGAVIPVDG 249

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 89.3 bits (222), Expect = 5e-21
 Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 21/203 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD--VKFAPVDV 59
           L G V +VTG A G+G     R+   G ++ L DL  +E  ++A ELG D  V     DV
Sbjct: 7   LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV 66

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNTV 117
           T    +Q A     + FG +DV V  AGI+        + G+V  +D   F+R++ VN +
Sbjct: 67  TDLAAMQAAAEEAVERFGGIDVVVANAGIA--------SGGSVAQVDPDAFRRVIDVNLL 118

Query: 118 GTFNVARLS-AQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           G F+  R +   LI          RG ++  +S+AA+    G  AY ASK+G+      +
Sbjct: 119 GVFHTVRATLPALIER--------RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANAL 170

Query: 177 ARDLAGAGIRVNTIAPGLFDTPL 199
             ++A  G+ V +      DT L
Sbjct: 171 RLEVAHHGVTVGSAYLSWIDTDL 193

Length = 296

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 89.9 bits (224), Expect = 1e-20
 Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 22/203 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE--SVAKELGPDVKFAPVDV 59
           L G V LVTG A G+G A  E + R+G  VV  D+P +     +VA  +G       +D+
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG--GTALALDI 265

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           T+ +   +      +  G LD+ V+ AGI+    + N ++    S      +L VN    
Sbjct: 266 TAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDS------VLAVN---- 315

Query: 120 FNVARLSAQL-IHENKLNEDGLR--GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
                L A L I E  L    L   G I+  +SI+   G  GQ  Y+ASK+G++G+   +
Sbjct: 316 -----LLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQAL 370

Query: 177 ARDLAGAGIRVNTIAPGLFDTPL 199
           A  LA  GI +N +APG  +T +
Sbjct: 371 APLLAERGITINAVAPGFIETQM 393

Length = 450

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 23/254 (9%)

Query: 7   GLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKE---LGPDVKFAPVDVTSE 62
            LVTGG+ G+GKA   R+   G  VV+    + +    VA E   LG        DV+  
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           +DV++     K+ FG+LDV V+ A    AF+  +       +   +   +  N     + 
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNAAAG-AFRPLSE-----LTPAHWDAKMNTNLKALVHC 114

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           A+ +A+L+ E         G I+  +S+ +       +A   +K+ +  +   +A +L  
Sbjct: 115 AQQAAKLMRERG------GGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGP 168

Query: 183 AGIRVNTIAPGLFDT-PLLSMLNEKVRNF-LARSIPAPQRLGHPDEFAQLVQSIITNP-- 238
            GIRVN ++PG+ DT  L    N +      A + PA  R+G P + A  V   + +   
Sbjct: 169 RGIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAG-RVGTPQDVADAV-GFLCSDAA 226

Query: 239 -LINGEVIRIDGAL 251
            +I G+ + +DG L
Sbjct: 227 RMITGQTLVVDGGL 240

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 87.3 bits (217), Expect = 1e-20
 Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 30/260 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAKELG---PDVKFAP 56
                V L+TGGA  +G A    +   G RV +      +E +++A EL    P    A 
Sbjct: 3   TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAAL 62

Query: 57  V-DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D+   + + + V  C  +FG+LD  VN A    +F  +    G++     +  +   N
Sbjct: 63  QADLLDPDALPELVAACVAAFGRLDALVNNAS---SF--YPTPLGSITE-AQWDDLFASN 116

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F +++ +A  + +        RG I+N   I A     G   Y A+K+ +  +T  
Sbjct: 117 LKAPFFLSQAAAPQLRKQ-------RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRS 169

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL-----SMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
           +A +LA   +RVN +APG     +L     +  +E+ R  +    P  +R+G P++ A+ 
Sbjct: 170 LALELAPE-VRVNAVAPG----AILWPEDGNSFDEEARQAILARTPL-KRIGTPEDIAEA 223

Query: 231 VQSIIT-NPLINGEVIRIDG 249
           V+ ++     I G+++ +DG
Sbjct: 224 VRFLLADASFITGQILAVDG 243

Length = 249

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 86.4 bits (214), Expect = 2e-20
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 31/236 (13%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           +VTG A G+G+A    +++ G  V+  DLP      +  E G  ++  P+DV     V++
Sbjct: 2   IVTGAAQGIGRAVARHLLQAGATVIALDLP----FVLLLEYGDPLRLTPLDVADAAAVRE 57

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVGTFNVARL 125
                    G +D  VNCAG+           G    L  +D+++   VN  G FN+ + 
Sbjct: 58  VCSRLLAEHGPIDALVNCAGV--------LRPGATDPLSTEDWEQTFAVNVTGVFNLLQA 109

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
            A  +      +D   G I+  AS AA+  +    AY ASK+ +  ++  +  +LA  G+
Sbjct: 110 VAPHM------KDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGV 163

Query: 186 RVNTIAPGLFDTPLL-SMLNEK------VRNFLAR---SIPAPQRLGHPDEFAQLV 231
           R N ++PG  DT +  ++ +++      +     +    IP   ++  P + A  V
Sbjct: 164 RCNVVSPGSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPL-GKIAQPADIANAV 218

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 86.0 bits (213), Expect = 4e-20
 Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 11/252 (4%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKELGPDVKFAPVDVTSEED 64
           V LVTG + GLG A      REG RVV+    ++E  E+VA E G        DV   + 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDRDQ 61

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
           VQ  +   K+ FG +D  VN A I   F             +D+++ L     G  N+ +
Sbjct: 62  VQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNLLQ 121

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAG 184
                  E         G +IN  +            Y+ +K+ ++G T  MA++L   G
Sbjct: 122 AVLPDFKERG------SGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYG 175

Query: 185 IRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLIN 241
           I VN ++ GL      S    ++V + +A++ P   ++  P + A  V    +     + 
Sbjct: 176 ITVNMVSGGLLKVTDASAATPKEVFDAIAQTTPL-GKVTTPQDIADAVLFFASPWARAVT 234

Query: 242 GEVIRIDGALRM 253
           G+ + +DG L M
Sbjct: 235 GQNLVVDGGLVM 246

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 85.8 bits (213), Expect = 5e-20
 Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 36/237 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V LVTGG  G+G       +  G  VV+C       E+V    G   +F   DV  
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVC--GRRAPETVD---GRPAEFHAADVRD 58

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD------FKRILLVN 115
            + V   V    +  G+LDV VN AG            G+ ++L         ++I+ +N
Sbjct: 59  PDQVAALVDAIVERHGRLDVLVNNAG------------GSPYALAAEASPRFHEKIVELN 106

Query: 116 TVGTFNVARLSAQLIHENKL--NEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
            +    VA+        N +   + G  G I+N  S++      G  AY A+K+G++ +T
Sbjct: 107 LLAPLLVAQ------AANAVMQQQPG-GGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLT 159

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFA 228
             +A + A   +RVN +  GL  T    +   + +    +A ++P   RL  P + A
Sbjct: 160 RSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL-GRLATPADIA 214

Length = 252

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 5e-20
 Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 24/254 (9%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEED 64
           L+TG A G+G      +   G  +++ D+     E    +L   G     AP +VT +++
Sbjct: 13  LITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQE 72

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGIS--CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           V+ A+   +   G +DV +N AGI     F  F           ++  ++ VN    F V
Sbjct: 73  VEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEF--------PEQEWNDVIAVNQTAVFLV 124

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           ++  A+ + + +       G IIN  S+ +  G+     Y+ASK  +  +T  M  +LA 
Sbjct: 125 SQAVARYMVKRQ------AGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELAR 178

Query: 183 AGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEF--AQLVQSIITNP 238
             I+VN IAPG F T +   L  +E    +L +  PA  R G P E   A +  S   + 
Sbjct: 179 HNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA-ARWGDPQELIGAAVFLSSKASD 237

Query: 239 LINGEVIRIDGALR 252
            +NG ++ +DG + 
Sbjct: 238 FVNGHLLFVDGGML 251

Length = 254

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 85.4 bits (212), Expect = 5e-20
 Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 23/199 (11%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEG--ESVAKEL---GPDVKFAPVDVTSE 62
           L+TG +SG+GKAT     + G  + L  +  S+   E++A EL   G       +D+++ 
Sbjct: 10  LITGASSGIGKATALAFAKAGWDLAL--VARSQDALEALAAELRSTGVKAAAYSIDLSNP 67

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVNTVGTF 120
           E +   +    + FG  DV +N AG   A+       G +    L D++ ++ +N    F
Sbjct: 68  EAIAPGIAELLEQFGCPDVLINNAG--MAYT------GPLLEMPLSDWQWVIQLNLTSVF 119

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
                    +           G+IIN +SIAA        AY  SK+ +   T  +A + 
Sbjct: 120 QCCSAVLPGMRARG------GGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEE 173

Query: 181 AGAGIRVNTIAPGLFDTPL 199
              GIRV TI  G  +TPL
Sbjct: 174 RSHGIRVCTITLGAVNTPL 192

Length = 241

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.8 bits (213), Expect = 6e-20
 Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 22/260 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA----KELGPDVKFAPVDVTS 61
           V LVTGG  G+G      +   G  + + D P  E  +      + LG +V F P DV  
Sbjct: 4   VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVAD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVGT 119
               +  +   + ++G++D  VN AG+          +G +  L  + F R+L +N  G 
Sbjct: 64  LSAHEAMLDAAQAAWGRIDCLVNNAGVGVK------VRGDLLDLTPESFDRVLAINLRGP 117

Query: 120 F----NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
           F     VA+   +++ + +  E+     I+  +S+ A      +  Y  SK+G+      
Sbjct: 118 FFLTQAVAK---RMLAQPE-PEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQL 173

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            A  LA  GI V  + PGL  T + + +  K    +A+ +    R G P++ A+ V ++ 
Sbjct: 174 FAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALA 233

Query: 236 TNPLI--NGEVIRIDGALRM 253
           +  L    G+ I +DG L +
Sbjct: 234 SGDLPYSTGQAIHVDGGLSI 253

Length = 256

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 85.5 bits (212), Expect = 7e-20
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 28/262 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT---SEGESVAKELGPDVKFAPVD 58
           LKG + L+TG + G+G A  +   + G  +V  D+      +G +  +ELG +      D
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCD 67

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT E+ VQ  V   +   G +D+ VN AGI     +         S +DF++++ ++   
Sbjct: 68  VTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEM------SAEDFRQVIDIDLNA 121

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F V++     + +         G IIN  S+ +  G+    AY+A+K G+  +T  +A 
Sbjct: 122 PFIVSKAVIPSMIKKG------HGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIAS 175

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVR--------NFLARSIPAPQRLGHPDEF--- 227
           +   A I+ N I PG   TP  + L E            F+    PA  R G P++    
Sbjct: 176 EYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPA-ARWGDPEDLAGP 234

Query: 228 AQLVQSIITNPLINGEVIRIDG 249
           A  + S  +N  +NG ++ +DG
Sbjct: 235 AVFLASDASN-FVNGHILYVDG 255

Length = 265

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 85.0 bits (210), Expect = 7e-20
 Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 27/254 (10%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAKEL---GPDVKFAPVDVTSEE 63
           LVTG + G+G+A   R+  +G  + +      S+ ESV   +   G + +    DV    
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGIS--CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             +  +       G     V  AGI+   AF           S +D+  ++  N  G +N
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPAL--------SEEDWDIVIHTNLDGFYN 113

Query: 122 VARLSAQLIHENKLNEDGLR--GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           V       IH   +     R  G II  AS++   G  GQV YSA+K+G++G T  +A +
Sbjct: 114 V-------IHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVE 166

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
           LA   I VN IAPGL DT +L+ +   +   L +++P   R+G P E A L   ++++  
Sbjct: 167 LAKRKITVNCIAPGLIDTEMLAEVEHDLDEAL-KTVPM-NRMGQPAEVASLAGFLMSDGA 224

Query: 238 PLINGEVIRIDGAL 251
             +  +VI ++G +
Sbjct: 225 SYVTRQVISVNGGM 238

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 85.5 bits (212), Expect = 7e-20
 Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 21/200 (10%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFA-PVDVTSEE 63
            VTG ASG+G+AT  R+  +G  + L D           +   LG  V     +D++  +
Sbjct: 4   FVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD 63

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVGTFN 121
            V         + G +DV +N AGIS A+       GTV  L  + ++R++ VN +G  +
Sbjct: 64  AVAAFAADIHAAHGSMDVVMNIAGIS-AW-------GTVDRLTHEQWRRMVDVNLMGPIH 115

Query: 122 VAR-LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           V       ++        G  G ++N +S A         AYSASK G+ G++  +  DL
Sbjct: 116 VIETFVPPMV------AAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDL 169

Query: 181 AGAGIRVNTIAPGLFDTPLL 200
           A  GI V+ + PG   TPL+
Sbjct: 170 ARHGIGVSVVVPGAVKTPLV 189

Length = 272

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 85.2 bits (211), Expect = 8e-20
 Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 23/259 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G V LVTG +SGLG    + + + G +VVL        + +  E+   G       +D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT  + ++ AV   +   G +D+ VN +G+S   K+ +       +  DF  +   NT G
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDV------TPADFDFVFDTNTRG 120

Query: 119 TFNVARLSAQ-LIHENKLNEDGLRGV-IINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            F VA+  A+ +I   K   +   G  IIN AS+A          Y  SK+ +V MT  M
Sbjct: 121 AFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAM 180

Query: 177 ARDLAGAGIRVNTIAPGLFDTPL-----LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           A +    GI VN I PG  DT +      +   +K+ + L R     +R+G P++   L+
Sbjct: 181 ALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPR-----KRVGKPEDLDGLL 235

Query: 232 QSIITNP--LINGEVIRID 248
             +  +    ING +I  D
Sbjct: 236 LLLAADESQFINGAIISAD 254

Length = 258

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 84.9 bits (210), Expect = 1e-19
 Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 19/201 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
            +G V +VTG A G+G+   ER+  EG RV+L D        V  E+   G        D
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAGDAAHVHTAD 60

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIF-NYNKGTVHSLDDFKRILLVNTV 117
           + +    Q  V    + FG++DV +N  G +   K + +Y +  + +  + +R L   T+
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEA--EIRRSLF-PTL 117

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
                  L   L  +        +GVI+N +SIA       ++ YSA+K G+  +T  +A
Sbjct: 118 WCCRAV-LPHMLERQ--------QGVIVNVSSIATRGIY--RIPYSAAKGGVNALTASLA 166

Query: 178 RDLAGAGIRVNTIAPGLFDTP 198
            + A  GIRVN +APG  + P
Sbjct: 167 FEHARDGIRVNAVAPGGTEAP 187

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 25/199 (12%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD--VKFAPV--DVTSEE 63
           L+TG +SG+G+AT  R  + G +++L        + +A ELG    VK  P+  DV+  E
Sbjct: 4   LITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVSDRE 63

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH----SLDDFKRILLVNTVGT 119
            ++ A+    + F  +D+ VN AG++          G        L+D++ ++  N  G 
Sbjct: 64  SIEAALENLPEEFRDIDILVNNAGLA---------LGLDPAQEADLEDWETMIDTNVKGL 114

Query: 120 FNVARL-SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            NV RL    +I  N+       G IIN  SIA     +G   Y A+K+ +   +L + +
Sbjct: 115 LNVTRLILPIMIARNQ-------GHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRK 167

Query: 179 DLAGAGIRVNTIAPGLFDT 197
           DL G GIRV  I PGL +T
Sbjct: 168 DLIGTGIRVTNIEPGLVET 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 69/256 (26%), Positives = 102/256 (39%), Gaps = 52/256 (20%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPV---- 57
           L+G V +VTGG+SG+G ATVE ++  G  V +C        S    L      A +    
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 58  -DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--------- 107
            DV  E DV       +  FG +D+ VN AG           +G V +  D         
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAG-----------QGRVSTFADTTDDAWRDE 114

Query: 108 --FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
              K   ++N    F    L                  I+   S+ A + +   VA SA+
Sbjct: 115 LELKYFSVINPTRAF----LPLL--------RASAAASIVCVNSLLALQPEPHMVATSAA 162

Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT----------PLLSMLNEKVRNFLA--R 213
           ++G++ +   +A +LA  G+RVN+I  GL ++                 E     LA  +
Sbjct: 163 RAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKK 222

Query: 214 SIPAPQRLGHPDEFAQ 229
            IP   RLG PDE A+
Sbjct: 223 GIPL-GRLGRPDEAAR 237

Length = 265

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 83.7 bits (207), Expect = 3e-19
 Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 34/259 (13%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPV--DVTSEE 63
             LVTG A G+G+A   R +  G RV+  D+  +   + A  LG D +F PV  D+T   
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-DARFVPVACDLTDAA 62

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTFN 121
            +  A+       G +DV V  AG + A         ++H      ++    +N    + 
Sbjct: 63  SLAAALANAAAERGPVDVLVANAGAARAA--------SLHDTTPASWRADNALNLEAAY- 113

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASI---AAYEGQSGQVAYSASKSGIVGMTLPMAR 178
              L  + + E  L     RG ++N  S+   AA     G  AYSA+K+G++  T  +A 
Sbjct: 114 ---LCVEAVLEGMLKRS--RGAVVNIGSVNGMAAL----GHPAYSAAKAGLIHYTKLLAV 164

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSM---LNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           +    GIR N +APG   T         N +V   L +  P  Q    PD+ A  V   +
Sbjct: 165 EYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPL-QDFATPDDVANAV-LFL 222

Query: 236 TNPL---INGEVIRIDGAL 251
            +P    I G  + +DG L
Sbjct: 223 ASPAARAITGVCLPVDGGL 241

Length = 257

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 83.4 bits (206), Expect = 3e-19
 Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 16/227 (7%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVDVTSE 62
           V +VTGGA+G+GKA    + + G  VV+ DL +   E+VA      G        +VTSE
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           +D++  V      FG + + VN AG                + +DF+    +N    F +
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGP-----KPFDMPMTEEDFEWAFKLNLFSAFRL 115

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           ++L A  + +         G I+N +S+++        AY +SK+ +  MT  +A DL  
Sbjct: 116 SQLCAPHMQKAG------GGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGP 169

Query: 183 AGIRVNTIAPGLFDT-PLLSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
            GIRVN +APG   T  L S+L  ++   + +  P   RLG P++ A
Sbjct: 170 KGIRVNAVAPGAVKTDALASVLTPEIERAMLKHTPL-GRLGEPEDIA 215

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 3e-19
 Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 21/235 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-----ESVAKELGPDVKFAPVDVT 60
           V ++TG + G+G AT       G  V L  L   +      +++ ++ G  +  A  DV 
Sbjct: 4   VMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVA-ADVA 62

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNTVG 118
            E DV +         G+LD  VN AGI  A       +  +  +D     RI   N VG
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEA-------QMRLEQMDAARLTRIFATNVVG 115

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMTLPMA 177
           +F  AR   + +        G  G I+N +S+AA  G  G+ + Y+ASK  I  MT+ +A
Sbjct: 116 SFLCAR---EAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLA 172

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR-NFLARSIPAPQRLGHPDEFAQLV 231
           +++A  GIRVN + PG+  T + +   E  R + +   IP   R G  +E A+ +
Sbjct: 173 KEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPM-GRGGTAEEVARAI 226

Length = 248

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 8e-19
 Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 25/253 (9%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP-----DVKFAPVDVTSE 62
           LVTGG SG+GK     +V  G  V++      +  + A+E+        V++ P DVT E
Sbjct: 11  LVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE 70

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
           + V +AV       G+L   V+CAG S          G +  +D   ++R + +N  GT 
Sbjct: 71  DQVARAVDAATAWHGRLHGVVHCAGGSETI-------GPITQIDSDAWRRTVDLNVNGTM 123

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
            V + +A+ +        G  G  +  +SIAA        AY  +KS +  +    A +L
Sbjct: 124 YVLKHAARELVR------GGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADEL 177

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
             + +RVN+I PGL  T L++ + E  ++        P P R+G  ++ A L   ++++ 
Sbjct: 178 GPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLP-RVGEVEDVANLAMFLLSDA 236

Query: 239 --LINGEVIRIDG 249
              I G+VI +DG
Sbjct: 237 ASWITGQVINVDG 249

Length = 276

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 82.3 bits (204), Expect = 1e-18
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 35/217 (16%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVD 58
           G V ++TG  SG+GK T   + + G  V++      +GE  A E+        V+   +D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGI-SCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           ++S   V++        F +LD+ +N AGI +   ++         + D F+    VN +
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRL---------TKDGFELQFAVNYL 111

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--------------SGQVAYS 163
           G F +  L   L+   K +       I+N +SIA   G               S   AY 
Sbjct: 112 GHFLLTNL---LLPVLKASAPSR---IVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYG 165

Query: 164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL 200
            SK   +  T  +AR L G G+ VN + PG+  T LL
Sbjct: 166 QSKLANILFTRELARRLEGTGVTVNALHPGVVRTELL 202

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 82.4 bits (204), Expect = 2e-18
 Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 18/204 (8%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-----PTSEGESVAKELGPDVKFA 55
           +L G V +VTG   G+G+A       EG RVV+ D+      ++ G S A+ +  ++  A
Sbjct: 3   LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA 62

Query: 56  -------PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDF 108
                    D+   +     V    ++FG LDV VN AGI    ++         S +++
Sbjct: 63  GGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGI-LRDRMI-----ANMSEEEW 116

Query: 109 KRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSG 168
             ++ V+  G F   R +A            +   IINT+S A  +G  GQ  YSA+K+G
Sbjct: 117 DAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAG 176

Query: 169 IVGMTLPMARDLAGAGIRVNTIAP 192
           I  +TL  A +L   G+ VN IAP
Sbjct: 177 IAALTLVAAAELGRYGVTVNAIAP 200

Length = 286

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 80.9 bits (200), Expect = 3e-18
 Identities = 69/257 (26%), Positives = 109/257 (42%), Gaps = 28/257 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGES---VAKELGPDVKFAPV 57
           LK  V +VTG   G+G+A   R+ +EG  VV+       E      + KE G +      
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLA 63

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
           DV++ E  +       D +G  D+ VN AG+       N        +DD    + +  +
Sbjct: 64  DVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLN--------VDDKLIDKHISTD 115

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
                  ++  A+ + E         G I+N AS+A      G   Y A K+ ++ +T  
Sbjct: 116 FKSVIYCSQELAKEMREG--------GAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKY 167

Query: 176 MARDLAGAGIRVNTIAPGLFDT----PLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           +A +LA   IRVN IAPG   T     L  +L    + F A       ++  P+E A+ V
Sbjct: 168 LALELA-PKIRVNAIAPGFVKTKLGESLFKVLGMSEKEF-AEKFTLMGKILDPEEVAEFV 225

Query: 232 QSIITNPLINGEVIRID 248
            +I+    I G+V  +D
Sbjct: 226 AAILKIESITGQVFVLD 242

Length = 252

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 80.0 bits (198), Expect = 7e-18
 Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 31/202 (15%)

Query: 9   VTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFA--PVDVTSEEDVQ 66
           +TG +SG+G+A      R+G  + L    T   ++ A  L    + +    DV   + + 
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALA 66

Query: 67  KAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHS----LDDFKRILLVNTVGTFN- 121
            A      + G  DV +  AGIS          GT+      L  F+ ++  N  G    
Sbjct: 67  AAAADFIAAHGLPDVVIANAGISV---------GTLTEEREDLAVFREVMDTNYFGMVAT 117

Query: 122 ----VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
               +A + A             RG ++  AS+A   G  G  AYSASK+  +     + 
Sbjct: 118 FQPFIAPMRAAR-----------RGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLR 166

Query: 178 RDLAGAGIRVNTIAPGLFDTPL 199
            +L  AG+RV TIAPG   TP+
Sbjct: 167 VELRPAGVRVVTIAPGYIRTPM 188

Length = 257

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 79.3 bits (195), Expect = 1e-17
 Identities = 76/256 (29%), Positives = 119/256 (46%), Gaps = 20/256 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPV--D 58
           L G   L+TG ++G+GK      V  G +V +        E +A E+     K  PV  D
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V+  + V   +       G +D+ V  AGI     + +        L++F+R+   N  G
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDM------PLEEFQRLQNTNVTG 120

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA--YSASKSGIVGMTLPM 176
            F  A+ +A+      + + G  GVIINTAS++ +     Q    Y ASK+ ++ +T  M
Sbjct: 121 VFLTAQAAAK-----AMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAM 175

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           A +LA   IRVN+++PG   T L+    E    +  + IP   RLG P+E A L   + +
Sbjct: 176 AVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPK-IPL-GRLGRPEELAGLYLYLAS 233

Query: 237 --NPLINGEVIRIDGA 250
             +  + G  I IDG 
Sbjct: 234 EASSYMTGSDIVIDGG 249

Length = 253

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 79.0 bits (195), Expect = 1e-17
 Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 24/239 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVL--CDLPTSEGESVAKELGPDVKFAPVDV 59
           +K    LVTG   G+GKA VE ++  G + V      P S    VAK  G  V    +DV
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKY-GDKVVPLRLDV 59

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           T  E ++ A    KD    +DV +N AG+    K     +     L+  K+ + VN  G 
Sbjct: 60  TDPESIKAAAAQAKD----VDVVINNAGV---LKPATLLEEGA--LEALKQEMDVNVFGL 110

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
             +A+  A ++  N        G I+N  S+A+ +       YSASKS    +T  +  +
Sbjct: 111 LRLAQAFAPVLKANG------GGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAE 164

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
           LA  G  V ++ PG  DT + +         E V   + +++ A +    PDE A+ V+
Sbjct: 165 LAAQGTLVLSVHPGPIDTRMAAGAGGPKESPETVAEAVLKALKAGEFHVFPDEMAKQVK 223

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 78.9 bits (195), Expect = 1e-17
 Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 35/256 (13%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDV 65
           LV GG+SG+G A       EG RV +         + A+ L  G  V+ A +D+T E  V
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAV 60

Query: 66  QKAVLLCKDSFGKLD-VNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNTVGTFNV 122
                   ++ G  D V +  A             G V +L     +  +     G + V
Sbjct: 61  DA---FFAEA-GPFDHVVITAADTP---------GGPVRALPLAAAQAAMDSKFWGAYRV 107

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           AR  A  I           G +   +  AA    +  V   A  + +  +   +A +LA 
Sbjct: 108 AR--AARIAPG--------GSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP 157

Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNF----LARSIPAPQRLGHPDEFAQLVQSIITNP 238
             +RVNT++PGL DTPL S L    R       A  +PA +R+G P++ A  +  +  N 
Sbjct: 158 --VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA-RRVGQPEDVANAILFLAANG 214

Query: 239 LINGEVIRIDGALRMI 254
              G  + +DG   ++
Sbjct: 215 FTTGSTVLVDGGHAIV 230

Length = 230

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 79.3 bits (196), Expect = 2e-17
 Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 11/201 (5%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
             G V ++TG ASG G A        G ++VL D+     +    EL   G +V     D
Sbjct: 4   FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V+    V+       + FG + +  N AG+     ++       +SL D++ +L VN  G
Sbjct: 64  VSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWE------NSLADWEWVLGVNLWG 117

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
             +  R    L+      +    G I+NTAS+A          Y+ SK  +V +T  + +
Sbjct: 118 VIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQ 177

Query: 179 DLA--GAGIRVNTIAPGLFDT 197
           DL+     +  + + P    T
Sbjct: 178 DLSLVTDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 78.4 bits (193), Expect = 2e-17
 Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 19/254 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKELGPDVKFAPVDVT 60
           L G V ++TG  +GLG+     + + G  +V   +    E ++  + LG    F   D+ 
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLI 65

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
            ++D+   V    +  G +D+ +N AGI     +  +         D+  ++ +N    F
Sbjct: 66  QQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEF------GNKDWDDVININQKTVF 119

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
            +++  A+     +  + G  G IIN AS+ +++G     +Y+ASKS ++G+T  +A +L
Sbjct: 120 FLSQAVAK-----QFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATEL 174

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLN-EKVRN--FLARSIPAPQRLGHPDEFA--QLVQSII 235
           +   I VN IAPG   T   + L  +  RN   L R IPA  R G PD+ A   +  S  
Sbjct: 175 SQYNINVNAIAPGYMATDNTAALRADTARNEAILER-IPA-SRWGTPDDLAGPAIFLSSS 232

Query: 236 TNPLINGEVIRIDG 249
            +  + G  + +DG
Sbjct: 233 ASDYVTGYTLAVDG 246

Length = 251

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 79.3 bits (195), Expect = 2e-17
 Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 25/236 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE--GESVAK---ELGPDVKFAP 56
           LK    LVTGG SG+G+A      REG  V +  LP  E   + V K   E G      P
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLP 106

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFK-IFNYNKGTVHSLDDFKRILLVN 115
            D++ E+  +  V     + G LD+    AG   A   I +       + + F++   +N
Sbjct: 107 GDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADL------TSEQFQKTFAIN 160

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F + + +  L+ +           II T+SI AY+     + Y+A+K+ I+  +  
Sbjct: 161 VFALFWLTQEAIPLLPKG--------ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRG 212

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL---SMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           +A+ +A  GIRVN +APG   T L        +K+  F  +  P  +R G P E A
Sbjct: 213 LAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQF-GQQTPM-KRAGQPAELA 266

Length = 294

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 77.9 bits (192), Expect = 3e-17
 Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 22/236 (9%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFA-----PV--DVT 60
           L+TG + G+G+AT       G  V    +  +   + A+E    V+ A      V  DV 
Sbjct: 6   LITGASRGIGRATAVLAAARGWSV---GINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           +E DV       + +FG+LD  VN AGI     +              +R+   N +G +
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGI-----VAPSMPLADMDAARLRRMFDTNVLGAY 117

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMTLPMARD 179
             AR +A+ +  ++    G  G I+N +SIA+  G   + V Y+ SK  +  +TL +A++
Sbjct: 118 LCAREAARRLSTDR---GGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKE 174

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           L   G+RVN + PGL +T + +   +  R   A  + A   LG   E  ++ ++I+
Sbjct: 175 LGPHGVRVNAVRPGLIETEIHASGGQPGR---AARLGAQTPLGRAGEADEVAETIV 227

Length = 248

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 78.1 bits (193), Expect = 3e-17
 Identities = 62/241 (25%), Positives = 99/241 (41%), Gaps = 31/241 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G   L+TGG SG+G  T  + + EG RV +     +  E+   ELG        D   
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-----FKRILLVNT 116
               +       ++FG+LD     AG++               L+D     F R    N 
Sbjct: 64  VAAQKALAQALAEAFGRLDAVFINAGVA-----------KFAPLEDWDEAMFDRSFNTNV 112

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G + +  + A L             +++N  SI A+ G      Y+ASK+ ++ +   +
Sbjct: 113 KGPYFL--IQALLPLLANPAS-----IVLNG-SINAHIGMPNSSVYAASKAALLSLAKTL 164

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLARSIPAPQRLGHPDEFAQL 230
           + +L   GIRVN ++PG   TPL   L       + V   +   +P   R G P+E A+ 
Sbjct: 165 SGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL-GRFGTPEEIAKA 223

Query: 231 V 231
           V
Sbjct: 224 V 224

Length = 249

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 76.6 bits (189), Expect = 6e-17
 Identities = 47/196 (23%), Positives = 75/196 (38%), Gaps = 28/196 (14%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LV GG   LG A V+     G  V   DL  +E    +  +     F        + V  
Sbjct: 5   LVYGGRGALGSAVVQAFKSRGWWVASIDLAENEEADASIIVLDSDSF----TEQAKQVVA 60

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK---RILLVNTVGTFNVAR 124
           +V       GK+D  +  AG         +  G+  S    K    +   N   +F  + 
Sbjct: 61  SV---ARLSGKVDALICVAG--------GWAGGSAKSKSFVKNWDLMWKQNLWTSFIASH 109

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG-- 182
           L+ + +           G+++ T + AA E   G + Y A+K+ +  +T  +A + +G  
Sbjct: 110 LATKHLLSG--------GLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLP 161

Query: 183 AGIRVNTIAPGLFDTP 198
           AG   N I P   DTP
Sbjct: 162 AGSTANAILPVTLDTP 177

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 76.1 bits (188), Expect = 1e-16
 Identities = 58/201 (28%), Positives = 85/201 (42%), Gaps = 22/201 (10%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
            +KG V LVTG   G+G+A VE+++  G   V       + ESV  +LGP V    +DVT
Sbjct: 3   DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVY--AAARDPESVT-DLGPRVVPLQLDVT 59

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVNTVG 118
               V  A     D    + + VN AGI             +     D  +  +  N  G
Sbjct: 60  DPASVAAAAEAASD----VTILVNNAGI-------FRTGSLLLEGDEDALRAEMETNYFG 108

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
              +AR  A ++  N        G I+N  S+ ++        YSASK+    +T  +  
Sbjct: 109 PLAMARAFAPVLAANG------GGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRA 162

Query: 179 DLAGAGIRVNTIAPGLFDTPL 199
           +LA  G RV  + PG  DT +
Sbjct: 163 ELAPQGTRVLGVHPGPIDTDM 183

Length = 238

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 76.1 bits (187), Expect = 2e-16
 Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 27/258 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL--PTSEGESVAKELGPDVKFAPV-- 57
           L+G V +VTG  +GLG+     +   G  +V  ++  PT   E++ +      +F  +  
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT---ETIEQVTALGRRFLSLTA 64

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+   + +   +      FG +D+ VN AG+               S  D+  ++ +N  
Sbjct: 65  DLRKIDGIPALLERAVAEFGHIDILVNNAGL------IRREDAIEFSEKDWDDVMNLNIK 118

Query: 118 GTFNVARLSA-QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
             F +++ +A   I        G  G IIN AS+ +++G     +Y+ASKSG++G+T  M
Sbjct: 119 SVFFMSQAAAKHFI------AQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLM 172

Query: 177 ARDLAGAGIRVNTIAPGLF---DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
           A + A   I VN IAPG     +T  L    ++    L R IPA  R G P +    V  
Sbjct: 173 ANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDR-IPA-GRWGLPSDLMGPVVF 230

Query: 234 IITNP--LINGEVIRIDG 249
           + ++    ING  I +DG
Sbjct: 231 LASSASDYINGYTIAVDG 248

Length = 253

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 65/196 (33%), Positives = 91/196 (46%), Gaps = 21/196 (10%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKEL---GPDVKFAPVD 58
            G V +VTG A G+G+    R   EG RVVL D   SE    VA EL   G +      D
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVD--RSELVHEVAAELRAAGGEALALTAD 64

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIF-NYNKGTVHSLDDFKRILLVNTV 117
           + +    Q A+    ++FG++DV +N  G +   K F  Y       ++   R  L  T+
Sbjct: 65  LETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEY---EEEQIEAEIRRSLFPTL 121

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
                    A L H   +   G  G I+N +SIA       +V YSA+K G+  +T  +A
Sbjct: 122 WC-----CRAVLPH---MLAQG-GGAIVNVSSIAT--RGINRVPYSAAKGGVNALTASLA 170

Query: 178 RDLAGAGIRVNTIAPG 193
            + A  GIRVN +APG
Sbjct: 171 FEYAEHGIRVNAVAPG 186

Length = 260

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 75.2 bits (185), Expect = 3e-16
 Identities = 72/251 (28%), Positives = 110/251 (43%), Gaps = 34/251 (13%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKELGPDVKFAPVDVTSEEDVQ 66
           LV GG+ G+G A V R V +G  V      + +  E +A+E G        D    + V 
Sbjct: 10  LVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQT--DSADRDAVI 67

Query: 67  KAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVGTFNVAR 124
             V       G LD+ V  AGI   F       G    L  DD  R+  +N    ++ + 
Sbjct: 68  DVV----RKSGALDILVVNAGI-AVF-------GDALELDADDIDRLFKINIHAPYHASV 115

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAG 184
            +A+     ++ E G R +II + +       +G  AY+ASKS + GM   +ARD    G
Sbjct: 116 EAAR-----QMPEGG-RIIIIGSVN-GDRMPVAGMAAYAASKSALQGMARGLARDFGPRG 168

Query: 185 IRVNTIAPGLFDT---PLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
           I +N + PG  DT   P    + + + +F+     A +R G P+E A +V  +       
Sbjct: 169 ITINVVQPGPIDTDANPANGPMKDMMHSFM-----AIKRHGRPEEVAGMVAWLAGPEASF 223

Query: 240 INGEVIRIDGA 250
           + G +  IDGA
Sbjct: 224 VTGAMHTIDGA 234

Length = 237

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 74.8 bits (184), Expect = 6e-16
 Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 20/257 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGPDVKFAPVD 58
           L   V +VTG   GLG A        G  V++     S+ + VA   +  G        D
Sbjct: 8   LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAAD 67

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           +   E          ++FG+LD+ VN  G +    + +       S  D       N   
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLS------TSTKDLADAFTFNVAT 121

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
              +   +  L+    L   G  G +IN +S        G  AY  +K+ +   T   A 
Sbjct: 122 AHALTVAAVPLM----LEHSG-GGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAAL 176

Query: 179 DLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           DL    IRVN IAPG   T  L     N+++R  + ++ P  +RLG P++ A     + +
Sbjct: 177 DLC-PRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPL-RRLGDPEDIAAAAVYLAS 234

Query: 237 --NPLINGEVIRIDGAL 251
                + G+ + +DG L
Sbjct: 235 PAGSYLTGKTLEVDGGL 251

Length = 263

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 74.5 bits (184), Expect = 7e-16
 Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 22/203 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L+G V ++TG +SG+G+     + R G R+VL        E V  E      P     P+
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           D++  ED ++ V      FG LD+ +N AGIS         +   H  S+D  ++I+ VN
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGIS--------MRSLFHDTSIDVDRKIMEVN 112

Query: 116 TVGTFNVARLSA-QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
             G   + + +   LI  ++       G I+  +SIA   G   + AY+ASK  + G   
Sbjct: 113 YFGPVALTKAALPHLIERSQ-------GSIVVVSSIAGKIGVPFRTAYAASKHALQGFFD 165

Query: 175 PMARDLAGAGIRVNTIAPGLFDT 197
            +  +L+   I V  + PGL DT
Sbjct: 166 SLRAELSEPNISVTVVCPGLIDT 188

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 74.2 bits (183), Expect = 7e-16
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 20/200 (10%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE--SVAKELGPDVKFAPV--DVTSEE 63
           ++TG + G+G+A  E +++ G   V+  L  SE     + +EL P ++   V  D++   
Sbjct: 3   ILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSDAA 62

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
            V++ +   +   G+ D+ +N AG      +   +K     LD+ ++   +N   T  V 
Sbjct: 63  GVEQLLEAIRKLDGERDLLINNAGS-----LGPVSKIEFIDLDELQKYFDLNL--TSPVC 115

Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA-- 181
             S  L       + GL+  ++N +S AA     G   Y +SK+    M     R LA  
Sbjct: 116 LTSTLL---RAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAAR-DM---FFRVLAAE 168

Query: 182 GAGIRVNTIAPGLFDTPLLS 201
              +RV + APG+ DT +  
Sbjct: 169 EPDVRVLSYAPGVVDTDMQR 188

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 27/203 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTGG  G+G ATV R++  G RVV     T+   S   +L   V+F   D+T+
Sbjct: 7   LAGKRALVTGGTKGIGAATVARLLEAGARVV-----TT-ARSRPDDLPEGVEFVAADLTT 60

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGT 119
            E          +  G +D+ V+  G S A        G   +L D  ++  L +N +  
Sbjct: 61  AEGCAAVARAVLERLGGVDILVHVLGGSSAP------AGGFAALTDEEWQDELNLNLLAA 114

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAA----YEGQSGQVAYSASKSGIVGMTLP 175
               RL   L+    +   G  GVII+  SI       E      AY+A+K+ +   +  
Sbjct: 115 ---VRLDRALL--PGMIARG-SGVIIHVTSIQRRLPLPE---STTAYAAAKAALSTYSKS 165

Query: 176 MARDLAGAGIRVNTIAPGLFDTP 198
           +++++A  G+RVNT++PG  +T 
Sbjct: 166 LSKEVAPKGVRVNTVSPGWIETE 188

Length = 260

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 73.3 bits (180), Expect = 2e-15
 Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 16/191 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             G   LVTG   G+G+ATV+ + + G RVV      ++ +S+ +E  P ++   VD++ 
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVREC-PGIEPVCVDLSD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            +  ++A+     S G +D+ VN A ++         K      + F R   VN     +
Sbjct: 64  WDATEEAL----GSVGPVDLLVNNAAVAILQPFLEVTK------EAFDRSFDVNVRAVIH 113

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V+++ A+      +   G+ G I+N +S A+    +    Y ++K+ +  +T  MA +L 
Sbjct: 114 VSQIVAR-----GMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELG 168

Query: 182 GAGIRVNTIAP 192
              IRVN++ P
Sbjct: 169 PHKIRVNSVNP 179

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.2 bits (180), Expect = 2e-15
 Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 22/256 (8%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKELGPDVKFAPVDVTSEEDVQ 66
           LVTGG+ GLG A      REG RVV+    + +  E++A ELG        DVT  E VQ
Sbjct: 9   LVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQ 68

Query: 67  KAVLLCKDSFGK-LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV--A 123
                  + FGK +   VN A    +F      K    + +DF++ L  +  G  N   A
Sbjct: 69  AMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQA 128

Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA---YSASKSGIVGMTLPMARDL 180
            L                G IIN   I     Q+  V    Y+ +K+ ++G+T  +A +L
Sbjct: 129 ALPGMREQGF--------GRIIN---IGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAEL 177

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
              GI VN ++ GL  T   S    ++V + +A + P  +++  P EFA  V    +   
Sbjct: 178 GPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPL-RKVTTPQEFADAVLFFASPWA 236

Query: 238 PLINGEVIRIDGALRM 253
             + G+ + +DG L M
Sbjct: 237 RAVTGQNLVVDGGLVM 252

Length = 253

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 72.5 bits (178), Expect = 3e-15
 Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 34/250 (13%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDV--KFAPVDVTSEEDV 65
           LVTG   G+G A   R+   G +V+           +A+    D   +    D+ ++ + 
Sbjct: 7   LVTGATKGIGLALSLRLANLGHQVI----------GIARSAIDDFPGELFACDL-ADIEQ 55

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
             A L   +    +D  VN  GI+    +   +   +  + D      V     F     
Sbjct: 56  TAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMK 115

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
             +            +G I+N  S A + G   + +YSA+KS +VG T   A +LA  GI
Sbjct: 116 LRE------------QGRIVNICSRAIF-GALDRTSYSAAKSALVGCTRTWALELAEYGI 162

Query: 186 RVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
            VN +APG  +T L        +E+ +  LA SIP  +RLG P+E A  +  ++++    
Sbjct: 163 TVNAVAPGPIETELFRQTRPVGSEEEKRVLA-SIPM-RRLGTPEEVAAAIAFLLSDDAGF 220

Query: 240 INGEVIRIDG 249
           I G+V+ +DG
Sbjct: 221 ITGQVLGVDG 230

Length = 234

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 72.8 bits (178), Expect = 3e-15
 Identities = 75/270 (27%), Positives = 119/270 (44%), Gaps = 41/270 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVL--------CDLPTSEGESVAKELGPDVK 53
           L G V LVTG + G+G+A   R+  +G  V +         D    E ES     G    
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN----GGKAF 59

Query: 54  FAPVDVTSEEDVQKAVLLCKDSF------GKLDVNVNCAGISCAFKIFNYNKGTVHSLDD 107
               D+ S + V+K V   K+         ++D+ VN AGI          +GT+ +  +
Sbjct: 60  LIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIG--------TQGTIENTTE 111

Query: 108 --FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
             F  I+ VN    F + + +  L+           G +IN +S     G +G +AY  S
Sbjct: 112 EIFDEIMAVNIKAPFFLIQQTLPLLRA--------EGRVINISSAEVRLGFTGSIAYGLS 163

Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGH 223
           K  +  MTLP+A+ L   GI VNTI PG   T + + L  + ++RNF   S     R+G 
Sbjct: 164 KGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS-SVFGRIGQ 222

Query: 224 PDEFAQLVQSIITNP--LINGEVIRIDGAL 251
            ++ A  V  + ++    + G++I + G  
Sbjct: 223 VEDIADAVAFLASSDSRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 72.2 bits (177), Expect = 4e-15
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 19/255 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L   V LVT    G+G A   R+ ++G  VV+        +     L   G  V      
Sbjct: 8   LANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCH 67

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V   ED ++ V    +  G +D+ V+ A ++  F   N    T    D   +IL VN   
Sbjct: 68  VGKAEDRERLVATAVNLHGGVDILVSNAAVNPFF--GNILDSTEEVWD---KILDVNVKA 122

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
           T  + +         ++ + G   V+I  +S+AA+    G   Y+ SK+ ++G+T  +A 
Sbjct: 123 TALMTKAVVP-----EMEKRGGGSVVI-VSSVAAFHPFPGLGPYNVSKTALLGLTKNLAP 176

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           +LA   IRVN +APGL  T   S L  ++ V   +  ++   +RLG P++ A +V  + +
Sbjct: 177 ELAPRNIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRI-RRLGQPEDCAGIVSFLCS 235

Query: 237 N--PLINGEVIRIDG 249
                I GE + + G
Sbjct: 236 EDASYITGETVVVGG 250

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 71.8 bits (176), Expect = 6e-15
 Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 19/234 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG--ESVAK--ELGPDVKFAPVDVTS 61
           + LVTGG+ G+G+AT   + +EG  V +          E V    + G        D++ 
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVGT 119
           E  V             L   VN AGI        + + TV +L  +   R+L  N  G 
Sbjct: 63  ENQVVAMFTAIDQHDEPLAALVNNAGIL-------FTQCTVENLTAERINRVLSTNVTGY 115

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMTLPMAR 178
           F   R   + +    L   G  G I+N +S A+  G  G+ V Y+ASK  I  +T  ++ 
Sbjct: 116 FLCCR---EAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSL 172

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVR-NFLARSIPAPQRLGHPDEFAQLV 231
           ++A  GIRVN + PG   T + +   E  R + +  +IP  QR G P+E AQ +
Sbjct: 173 EVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPM-QRGGQPEEVAQAI 225

Length = 247

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 71.8 bits (176), Expect = 6e-15
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 19/245 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
            +G V LVTG + G+G A    +V+ G +VV C     + E++A E      P +     
Sbjct: 4   WRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQC 63

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+++EE +       +     +DV +N AG+  A      +  T    + +K +  VN +
Sbjct: 64  DLSNEEQILSMFSAIRTQHQGVDVCINNAGL--ARPEPLLSGKT----EGWKEMFDVNVL 117

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA--YSASKSGIVGMTLP 175
                 R + Q + E  ++     G IIN  S++ +      V   Y+A+K  +  +T  
Sbjct: 118 ALSICTREAYQSMKERNVD----DGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEG 173

Query: 176 MARDL--AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
           + ++L  A   IR  +I+PGL +T     L++      A +         P++ A  V  
Sbjct: 174 LRQELREAKTHIRATSISPGLVETEFAFKLHDNDPE-KAAATYESIPCLKPEDVANAVLY 232

Query: 234 IITNP 238
           +++ P
Sbjct: 233 VLSTP 237

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 70.8 bits (174), Expect = 9e-15
 Identities = 59/241 (24%), Positives = 90/241 (37%), Gaps = 24/241 (9%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           L+TGG SG+G A   + +  G  V++            KEL P++    +DV   E V+ 
Sbjct: 9   LITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL-PNIHTIVLDVGDAESVEA 67

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
                   +  LD+ +N AGI    +  +        LD     +  N +G     RL  
Sbjct: 68  LAEALLSEYPNLDILINNAGIQ---RPIDLRDPASD-LDKADTEIDTNLIGPI---RLIK 120

Query: 128 QLI-HENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIR 186
             + H  K  E      I+N +S  A+   +    Y A+K+ +   TL +   L   G+ 
Sbjct: 121 AFLPHLKKQPE----ATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVE 176

Query: 187 VNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIR 246
           V  I P   DT L             R +P        DEF   V + +       E IR
Sbjct: 177 VVEIVPPAVDTELHEERRNPDGGTP-RKMPL-------DEFVDEVVAGLER---GREEIR 225

Query: 247 I 247
           +
Sbjct: 226 V 226

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 65/235 (27%), Positives = 93/235 (39%), Gaps = 48/235 (20%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVD 58
           L G V ++TG +SG+G+AT E   R G R+VL        ++VA+E   LG +V   P D
Sbjct: 5   LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTD 64

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT  + V+          G++DV VN  G                          V  VG
Sbjct: 65  VTDADQVKALATQAASFGGRIDVWVNNVG--------------------------VGAVG 98

Query: 119 TFNVARLSA--QLIHENKLN------------EDGLRGVIINTASIAAYEGQSGQVAYSA 164
            F    + A  Q+I  N +             +    G+ IN  S+  +  Q    AYSA
Sbjct: 99  RFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSA 158

Query: 165 SKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAP 218
           SK G+ G +  +  +LA    I V  + P   DTP          N+  R +  P
Sbjct: 159 SKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFR----HGANYTGRRLTPP 209

Length = 330

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 17/190 (8%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTG  +G G+    R +++G +V+         + +  ELG ++  A +DV +   +++
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEE 63

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTFNVAR- 124
            +      +  +DV VN AG++   +         H  S++D++ ++  N  G   + R 
Sbjct: 64  MLASLPAEWRNIDVLVNNAGLALGLE-------PAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAG 184
           +   ++  N        G IIN  S A     +G   Y A+K+ +   +L +  DL G  
Sbjct: 117 VLPGMVERN-------HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169

Query: 185 IRVNTIAPGL 194
           +RV  I PGL
Sbjct: 170 VRVTDIEPGL 179

Length = 248

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 69.8 bits (171), Expect = 3e-14
 Identities = 75/277 (27%), Positives = 108/277 (38%), Gaps = 67/277 (24%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           ++TG ASG+G AT E +   G  V+  DL   E + +A            D+++ E    
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDL--READVIA------------DLSTPEGRAA 48

Query: 68  AVL-LCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLS 126
           A+  +     G LD  VNCAG+           GT  +      +L VN  G    A + 
Sbjct: 49  AIADVLARCSGVLDGLVNCAGVG----------GTTVAGL----VLKVNYFGL--RALME 92

Query: 127 AQLIHENKLNEDGLRGVIINTASIAAYE---------------------------GQSGQ 159
           A L         G     +  +SIA                              GQ G 
Sbjct: 93  ALL----PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGY 148

Query: 160 VAYSASKSGIVGMTLPMARD-LAGAGIRVNTIAPGLFDTPLLS-MLNEKVRNFLARSIPA 217
           +AY+ SK  +   T   A   L GAG+RVNT+APG  +TP+L   L +        +   
Sbjct: 149 LAYAGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVT 208

Query: 218 P-QRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGAL 251
           P  R   PDE A ++  + +     ING  + +DG L
Sbjct: 209 PMGRRAEPDEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 69.6 bits (171), Expect = 5e-14
 Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 24/213 (11%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAKEL----GPDVKFAPV 57
           K V  L+TG  SG G    +++   G  V+  C      G   AKEL       ++   +
Sbjct: 1   KAV--LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPG---AKELRRVCSDRLRTLQL 55

Query: 58  DVTSEEDVQKAVLLCKDSFGK--LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
           DVT  E +++A    K+  G+  L   VN AGI   F         +  +DD+++ + VN
Sbjct: 56  DVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGI-LGFGG----DEELLPMDDYRKCMEVN 110

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             GT  V +    L+   K       G ++N +S+          AY ASK+ +   +  
Sbjct: 111 LFGTVEVTKAFLPLLRRAK-------GRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDS 163

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR 208
           + R+L   G++V+ I PG F T +        +
Sbjct: 164 LRRELQPWGVKVSIIEPGNFKTGITGNSELWEK 196

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 5e-14
 Identities = 55/207 (26%), Positives = 81/207 (39%), Gaps = 25/207 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G V L+TG +SG+G+AT  ++   G  V L        + +  E+   G        D
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCD 428

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD---DFKRILLVN 115
           +T    V   V       G +D  VN AG S         +   +S D   D++R + VN
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNAGRSI-------RRSVENSTDRFHDYERTMAVN 481

Query: 116 TVGTFNVARLSAQLI---HENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
             G     RL   L+    E +       G ++N +SI          AY ASK+ +   
Sbjct: 482 YFGA---VRLILGLLPHMRERR------FGHVVNVSSIGVQTNAPRFSAYVASKAALDAF 532

Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPL 199
           +   A +    GI   TI   L  TP+
Sbjct: 533 SDVAASETLSDGITFTTIHMPLVRTPM 559

Length = 657

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 69.6 bits (170), Expect = 5e-14
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVT 60
           G   ++TGGASG+G AT     R G RVVL D+           L   G DV     DV 
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 61  SEEDVQKAVLLCKDSF---GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
             E+V     L  ++F   G +DV  + AGI     I           DD++ ++ V+  
Sbjct: 66  HREEVTH---LADEAFRLLGHVDVVFSNAGIVVGGPIVEMTH------DDWRWVIDVDLW 116

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G+ +   + A L    +L E G  G ++ TAS A     +G  AY  +K G+VG+   +A
Sbjct: 117 GSIHT--VEAFL---PRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLA 171

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR 208
           R++   GI V+ + P + +T L++  +E++R
Sbjct: 172 REVTADGIGVSVLCPMVVETNLVAN-SERIR 201

Length = 275

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 68.6 bits (168), Expect = 8e-14
 Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 25/256 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDV 59
           LKG    + G + GLG A     ++EG +V +     ++ + + K L    ++ +   DV
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDV 62

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           +S E  +  +         +D  V   G         Y + TV      + +L  +    
Sbjct: 63  SSTESARNVIEKAAKVLNAIDGLVVTVG--------GYVEDTVEEFSGLEEMLTNHIKIP 114

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
                 S + + E          +++ ++    Y+    Q++Y+ +K+G+      +A +
Sbjct: 115 LYAVNASLRFLKEGS-------SIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASE 167

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
           L G GIRVN IAP           N K      R +        P++FA+++  ++T+  
Sbjct: 168 LLGRGIRVNGIAPTTISGDFEPERNWKK----LRKLGDDM--APPEDFAKVIIWLLTDEA 221

Query: 239 -LINGEVIRIDGALRM 253
             ++G VI +DG  R+
Sbjct: 222 DWVDGVVIPVDGGARL 237

Length = 238

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 30/242 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPV--DV 59
           LK    L+TG + G+G+A  E +   G R++L      + E++A  L    +   V  D+
Sbjct: 3   LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADL 62

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           TSE   + AVL      G ++V +N AG++  F +           +  +R+L +N    
Sbjct: 63  TSEAGRE-AVLARAREMGGINVLINNAGVNH-FALL-----EDQDPEAIERLLALNLTAP 115

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
             + R    L+            +++N  S     G  G  +Y ASK  + G +  + R+
Sbjct: 116 MQLTRALLPLLRAQP------SAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRE 169

Query: 180 LAGAGIRVNTIAPGLFDTPLLS----MLNEKVRNFLARSIPAPQRLGHPDEFA-QLVQSI 234
           LA  G+RV  +AP    T + S     LN  + N           +  P++ A  ++Q+I
Sbjct: 170 LADTGVRVLYLAPRATRTAMNSEAVQALNRALGN----------AMDDPEDVAAAVLQAI 219

Query: 235 IT 236
             
Sbjct: 220 EK 221

Length = 263

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 17/198 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA----KELGPDVKFAPVDVTS 61
           V  V G   GLG A   R   EG  V L     ++ E++     ++ G   K  P D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E++V     L ++  G L+V V  AG +  F I         +   F+++  +   G F 
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGANVWFPI------LETTPRVFEKVWEMAAFGGFL 114

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            AR +A+ +          RG II T + A+  G++G  A++ +K  +  +   MAR+L 
Sbjct: 115 AAREAAKRMLARG------RGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELG 168

Query: 182 GAGIRV-NTIAPGLFDTP 198
             GI V + I  G  DT 
Sbjct: 169 PKGIHVAHVIIDGGIDTD 186

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 58/196 (29%), Positives = 85/196 (43%), Gaps = 24/196 (12%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK---ELGPDVKFA-PVDVTSEE 63
           L+TG +SG G+A  +  +  G RVV     T   E+       L PD   A  +DVT  +
Sbjct: 8   LITGVSSGFGRALAQAALAAGHRVVG----TVRSEAARADFEALHPDRALARLLDVTDFD 63

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTFN 121
            +   V   + +FG +DV VN AG          ++G +    L + +R   VN  G   
Sbjct: 64  AIDAVVADAEATFGPIDVLVNNAGYG--------HEGAIEESPLAEMRRQFEVNVFGA-- 113

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           VA   A L           RG I+N  S+       G   Y  SK  + G++  +A+++A
Sbjct: 114 VAMTKAVLPGMRARR----RGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVA 169

Query: 182 GAGIRVNTIAPGLFDT 197
             GI V  + PG F T
Sbjct: 170 PFGIHVTAVEPGSFRT 185

Length = 277

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 66.5 bits (163), Expect = 4e-13
 Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 29/253 (11%)

Query: 11  GGASGLGKATVERIVREGGRVVLCDLPTSEG----ESVAKELGPDVKFAPVDVTSEEDVQ 66
              + +  A  +    EG  VVL   P +      + +AKEL  DV   P+DVTS+ED+ 
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVI--PLDVTSDEDID 60

Query: 67  KAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD----DFKRILLVNTVGTFNV 122
           +     K+  GK+D  V+   +S         +     LD     F + L ++     ++
Sbjct: 61  ELFEKVKEDGGKIDFLVHSIAMS------PEIRKGKPYLDTSREGFLKALDISAYSFISL 114

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           A+ +     +  +NE    G I+  + IAA     G      +K+ +  +   +A +L  
Sbjct: 115 AKAA-----KPLMNEG---GSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGR 166

Query: 183 AGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--P 238
            GIRVNTI+ G   T   S     +K+  +     P   R    +E A     ++++   
Sbjct: 167 KGIRVNTISAGPTKTTAGSGIGGFDKMVEYAEEMAPL-GRNASAEEVANAAAFLLSDLAR 225

Query: 239 LINGEVIRIDGAL 251
            I G+++ +DG  
Sbjct: 226 GITGQILYVDGGF 238

Length = 239

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 5e-13
 Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 31/236 (13%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
             L+TG + G+G A    +      ++L   P    + +A EL P     PVD+T  E +
Sbjct: 5   TALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAEL-PGATPFPVDLTDPEAI 62

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVGTFNVA 123
             AV    +  G+LDV V+ AG++        + G V     D+++  L VN V     A
Sbjct: 63  AAAV----EQLGRLDVLVHNAGVA--------DLGPVAESTVDEWRATLEVNVVA---PA 107

Query: 124 RLSAQLIHENKLNEDGLRGVIINT-ASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            L+  L+    L       V IN+ A + A  G     +Y+ASK  +  +   +  +  G
Sbjct: 108 ELTRLLL--PALRAAHGHVVFINSGAGLRANPGWG---SYAASKFALRALADALREEEPG 162

Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
             +RV ++ PG  DT +       +          P+R   P+  A+ V+  +  P
Sbjct: 163 N-VRVTSVHPGRTDTDMQ----RGLVAQEGGEY-DPERYLRPETVAKAVRFAVDAP 212

Length = 227

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 7e-13
 Identities = 62/206 (30%), Positives = 89/206 (43%), Gaps = 31/206 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           M    V LVTG +SG+G+AT E++ R G RV      TS   + A  + P V+   +DVT
Sbjct: 1   MSNSKVALVTGASSGIGRATAEKLARAGYRVF----GTSRNPARAAPI-PGVELLELDVT 55

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVG 118
            +  VQ AV       G++DV VN AG+  A        G     S+   + +   N  G
Sbjct: 56  DDASVQAAVDEVIARAGRIDVLVNNAGVGLA--------GAAEESSIAQAQALFDTNVFG 107

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASI-----AAYEGQSGQVAYSASKSGIVGMT 173
              + R  A L H          G IIN +S+     A Y        Y+ASK  + G +
Sbjct: 108 ILRMTR--AVLPHMRAQG----SGRIINISSVLGFLPAPYMA-----LYAASKHAVEGYS 156

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPL 199
             +  ++   GIRV+ + P    T  
Sbjct: 157 ESLDHEVRQFGIRVSLVEPAYTKTNF 182

Length = 270

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 37/254 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLC-------------DLPTSEGESV--AK 46
           L G V  VTG + G+G+A   R+ + G  VV+               LP +  E+    +
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 47  ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
             G       VDV  E+ V+  V    D FG+LD+ VN AG      + +          
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDT------PAK 114

Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
            F  +  VN  GT+ +++ +   + +        +G I+N +   +     G VAY+A K
Sbjct: 115 RFDLMQRVNLRGTYLLSQAALPHMVKAG------QGHILNISPPLSLRPARGDVAYAAGK 168

Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD 225
           +G+  +TL +A +L   GI VN++ P    +TP  + L+       ARS         P+
Sbjct: 169 AGMSRLTLGLAAELRRHGIAVNSLWPSTAIETPAATELSGGSDPARARS---------PE 219

Query: 226 EFAQLVQSIITNPL 239
             +  V +I++ P 
Sbjct: 220 ILSDAVLAILSRPA 233

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 62.9 bits (154), Expect = 3e-12
 Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 23/164 (14%)

Query: 8   LVTGGASGLGKATVERIVREGGR-VVLC---DLPTSEGESVAKEL---GPDVKFAPVDVT 60
           LVTGG  GLG      +   G R +VL      P  E E++  EL   G +V     DV+
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
             + V+  +   +     L   ++ AG+     + N       + +DF R+L     G +
Sbjct: 64  DRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLAN------MTAEDFARVLAPKVTGAW 117

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA 164
           N+   +          +  L   ++  +SIA   G  GQ  Y+A
Sbjct: 118 NLHEATR---------DRPLDFFVL-FSSIAGVLGSPGQANYAA 151

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 29/173 (16%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGG-RVVLC--------DLPTSEGESVAKELGPDVK 53
            G V LVTGGA G+G+A    + R  G R+VL         +   ++  +  + LG  V 
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVL 263

Query: 54  FAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRI 111
           +   DVT    V++ +   ++ +G +D  ++ AG+             +   + +DF+ +
Sbjct: 264 YISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL--------RDALLAQKTAEDFEAV 315

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA 164
           L     G  N+A+  A          + L   ++  +S++A+ G +GQ  Y+A
Sbjct: 316 LAPKVDGLLNLAQALAD---------EPLDFFVL-FSSVSAFFGGAGQADYAA 358

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 63.2 bits (154), Expect = 6e-12
 Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 46/275 (16%)

Query: 2   LKGVVGLVTGGA--SGLGKATVERIVREGGRVVL-----------CDLPTSEGESVAKEL 48
           L   + LVTG +  +G+G A   R+  +G  +               +   E   + +E+
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 49  G-PDVKFAPVDVT-SEEDVQKAVL-LCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
               V+   +++  S+      V     +  G   + +N A  S         + T   L
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHT---RLEELTAEQL 119

Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLR-GVIINTASIAAYEGQS-----GQ 159
           D       VN   T  ++   A+         DG   G IIN  S     GQS      +
Sbjct: 120 DKH---YAVNVRATMLLSSAFAK-------QYDGKAGGRIINLTS-----GQSLGPMPDE 164

Query: 160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ 219
           +AY+A+K  I   T  +A +LA  GI VN + PG  DT     + E++++ L    P   
Sbjct: 165 LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDT---GWITEELKHHLVPKFPQ-G 220

Query: 220 RLGHPDEFAQLVQSIITN--PLINGEVIRIDGALR 252
           R+G P + A+L+  +++     I G+VI  +G   
Sbjct: 221 RVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGFS 255

Length = 256

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 62.4 bits (151), Expect = 1e-11
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 29/264 (10%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAKELGPDVKFA---P 56
           MLKG V LVTG + G+G+A  +R+  +G  V +       E E    E+  +   A    
Sbjct: 1   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 60

Query: 57  VDVTSEEDVQKAV------LLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKR 110
            ++ S   V+         L  +    K D+ +N AGI     I    + T      F R
Sbjct: 61  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI----EETTEQF--FDR 114

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
           ++ VN    F + + +   + +N          IIN +S A        +AYS +K  I 
Sbjct: 115 MVSVNAKAPFFIIQQALSRLRDNSR--------IINISSAATRISLPDFIAYSMTKGAIN 166

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFAQ 229
            MT  +A+ L   GI VN I PG   T +   +L++ +    A +I A  RLG  ++ A 
Sbjct: 167 TMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIAD 226

Query: 230 LVQSIITNP---LINGEVIRIDGA 250
              + + +P    + G++I + G 
Sbjct: 227 -TAAFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 19/197 (9%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVL--CDLPTSEGE-SVAKELGPDVKFAPVDVTSEED 64
           L+TG + G+G   V +++  G   V+  C  P++  E +        +    +DVT E  
Sbjct: 2   LITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEIA 61

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
                +  +     LDV +N AGI     + +Y   +    +D   +  VN +G   + +
Sbjct: 62  ESAEAVAERLGDAGLDVLINNAGI-----LHSYGPASEVDSEDLLEVFQVNVLGPLLLTQ 116

Query: 125 LSAQLIHENKLNEDGLRGVIINT----ASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
               L+        G R  IIN      SI       G  +Y ASK+ +  +T  +A +L
Sbjct: 117 AFLPLL------LKGARAKIINISSRVGSIGD-NTSGGWYSYRASKAALNMLTKSLAVEL 169

Query: 181 AGAGIRVNTIAPGLFDT 197
              GI V ++ PG   T
Sbjct: 170 KRDGITVVSLHPGWVRT 186

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 61.8 bits (150), Expect = 2e-11
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 17/204 (8%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAP 56
           +L   + LVTG + G+G+       R G  V+L      +   VA  +    G   ++  
Sbjct: 1   LLNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFI 60

Query: 57  VDV--TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
           +D+   + E+ Q+       ++ +LD  ++ AG+     + +    +  +   ++ +  V
Sbjct: 61  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGL-----LGDVCPLSEQNPQVWQDVXQV 115

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N   TF + +    L+     ++ G    ++ T+S    +G++   AY+ SK    G+  
Sbjct: 116 NVNATFMLTQALLPLL---LKSDAG---SLVFTSSSVGRQGRANWGAYAVSKFATEGLXQ 169

Query: 175 PMARDLAGAGIRVNTIAPGLFDTP 198
            +A +     +RVN I PG   T 
Sbjct: 170 VLADEYQQRNLRVNCINPGGTRTA 193

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 16/194 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           V  +TG + G G+A  E  +  G RVV     T+    +A++ G  +    +DVT    V
Sbjct: 5   VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAV 64

Query: 66  QKAVLLCKDSFGKLDVNVNCAGI--SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
             AV    + FG+LD+ VN AG       +          +  + +  +  N  G   V 
Sbjct: 65  FAAVETAVEHFGRLDIVVNNAGYGLFGMIEEV--------TESEARAQIDTNFFGALWVT 116

Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
           +  A L +   L E    G II  +SI           Y ASK  + GM+  +A+++A  
Sbjct: 117 Q--AVLPY---LREQR-SGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEF 170

Query: 184 GIRVNTIAPGLFDT 197
           GI+V  + PG + T
Sbjct: 171 GIKVTLVEPGGYST 184

Length = 275

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 32/254 (12%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRV-VLCDLPTSEGESVAKELGPDVKFAPV---DVTS 61
             LVTG A  +G+A    +   G  V V  +    E E++A E+    + A     D+  
Sbjct: 11  AALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD 70

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E +V+  V     + G + + VN A       +F Y+     +   + R +  N    F 
Sbjct: 71  EAEVRALVARASAALGPITLLVNNA------SLFEYDSAASFTRASWDRHMATNLRAPFV 124

Query: 122 VAR-LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           +A+  +  L           RG+++N      +      ++Y+ SK+ +   T  +A+ L
Sbjct: 125 LAQAFARAL-------PADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQAL 177

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLA--RSIPAPQRLGH---PDEFAQLVQSII 235
           A   IRVN I PG    P L    +   +F     + P    LG    P+E A  V+ ++
Sbjct: 178 APR-IRVNAIGPG----PTLPSGRQSPEDFARQHAATP----LGRGSTPEEIAAAVRYLL 228

Query: 236 TNPLINGEVIRIDG 249
             P + G++I +DG
Sbjct: 229 DAPSVTGQMIAVDG 242

Length = 258

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 60.5 bits (147), Expect = 5e-11
 Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 11/194 (5%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           L+TGGASG+G A  +R +  G  V++C            E  P++     DV   +  ++
Sbjct: 9   LITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-PEIHTEVCDVADRDSRRE 67

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
            V   K  +  L+V +N AGI     +          LDD ++ +  N +      RL+A
Sbjct: 68  LVEWLKKEYPNLNVLINNAGIQRNEDLTGAED----LLDDAEQEIATNLLAPI---RLTA 120

Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
            L+       +     IIN +S  A+   +    Y A+K+ I   TL +   L    + V
Sbjct: 121 LLLPHLLRQPEAT---IINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEV 177

Query: 188 NTIAPGLFDTPLLS 201
             +AP L DT   +
Sbjct: 178 IELAPPLVDTTEGN 191

Length = 245

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 6e-11
 Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 28/253 (11%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEED 64
           +V GG SG+     +   R G  V +      + ++   +L   GP+      DV     
Sbjct: 13  VVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAA 72

Query: 65  VQKAVLLCKDSFGKLDVNVNCAG---ISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           V+ A     D FG +DV V+ A     + A  +         S + FK ++ ++ +GTFN
Sbjct: 73  VEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGM---------SANGFKTVVDIDLLGTFN 123

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V + +  L     L   G    II  ++  A+     Q    A+K+G+  +T  +A +  
Sbjct: 124 VLKAAYPL-----LRRPG--ASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWG 176

Query: 182 GAGIRVNTIAPG-LFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN- 237
             GIRVN+I PG +  T  ++ L  + +++  +A+S+P  +R G   + A     + ++ 
Sbjct: 177 PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPL-KRNGTKQDIANAALFLASDM 235

Query: 238 -PLINGEVIRIDG 249
              I G V+ +DG
Sbjct: 236 ASYITGVVLPVDG 248

Length = 264

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 7e-11
 Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 36/254 (14%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVV--LCDLPTSEG-ESVAKELGP--DVKFAPVDVT 60
           + +VTG +SG G  T   + ++G  V+  + +    E   S A +L    ++K   +DVT
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVG 118
            +  +    L+ K   G++D+ VN AG +        N G V    ++++++    N  G
Sbjct: 65  DQNSIHNFQLVLK-EIGRIDLLVNNAGYA--------NGGFVEEIPVEEYRKQFETNVFG 115

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
             +V +     + + K       G IIN +SI+   G  G   Y +SK  + G +  +  
Sbjct: 116 AISVTQAVLPYMRKQK------SGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRL 169

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL--------------GHP 224
           +L   GI V  I PG ++T +  +  +   N    + P  + +              G+P
Sbjct: 170 ELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNP 229

Query: 225 DEFAQLVQSIITNP 238
            + A L+  I  + 
Sbjct: 230 IDVANLIVEIAESK 243

Length = 280

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 60.6 bits (147), Expect = 8e-11
 Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 37/216 (17%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPV-----D 58
           G   ++TG  +G+GK T   + R G RV++     ++ E  A E+  D     V     D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGI-SCAFKIFNYNKGTVHSL--DDFKRILLVN 115
           + S + ++           +LDV +N AG+  C            +S   D F+    VN
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCP-----------YSKTEDGFEMQFGVN 109

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ------------SGQVAYS 163
            +G F +  L   L+ ++  +       I+N +S+A   G+            +   AY 
Sbjct: 110 HLGHFLLTNLLLDLLKKSAPSR------IVNVSSLAHKAGKINFDDLNSEKSYNTGFAYC 163

Query: 164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL 199
            SK   V  T  +AR L G G+ VN + PG+  T L
Sbjct: 164 QSKLANVLFTRELARRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 60.5 bits (147), Expect = 8e-11
 Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 22/208 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G   L+TG +SG+G+A  E+  R G  VV         ++VA  +   G D    P D
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCD 97

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD---DFKRILLVN 115
           ++  + V   V   +   G +D+ +N AG S         +    SLD   D +R +++N
Sbjct: 98  LSDLDAVDALVADVEKRIGGVDILINNAGRSI-------RRPLAESLDRWHDVERTMVLN 150

Query: 116 TVGTFNVAR-LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMT 173
                 + R L+  ++           G IIN A+       S     Y+ASK+ +  ++
Sbjct: 151 YYAPLRLIRGLAPGMLERGD-------GHIINVATWGVLSEASPLFSVYNASKAALSAVS 203

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLS 201
             +  +    G+   T+   L  TP+++
Sbjct: 204 RVIETEWGDRGVHSTTLYYPLVATPMIA 231

Length = 293

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 49/241 (20%), Positives = 83/241 (34%), Gaps = 44/241 (18%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           +V G    +G A  + +   G  V+                G       VD+T E  ++ 
Sbjct: 2   IVIGATGTIGLAVAQLLSAHGHEVIT--------------AGRSSGDYQVDITDEASIKA 47

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
                 +  G  D  V+ AG    F           +  DF+R L    +G  N+ R   
Sbjct: 48  LF----EKVGHFDAIVSTAG-DAEFAPLAE-----LTDADFQRGLNSKLLGQINLVRHGL 97

Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
             +++         G I  T+ I A     G  A +     + G     A +L   GIR+
Sbjct: 98  PYLNDG--------GSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELP-RGIRI 148

Query: 188 NTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRI 247
           N ++PG+ +  L     E   +F     P P      ++ A+     +      G+V+ +
Sbjct: 149 NAVSPGVVEESL-----EAYGDFFPGFEPVP-----AEDVAKAYVRSVEGA-FTGQVLHV 197

Query: 248 D 248
           D
Sbjct: 198 D 198

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFA---PVDVTSEED 64
           LV G +SG+G AT   +   G  V L      + E +  ++  D   A   P+DVT  + 
Sbjct: 14  LVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDS 73

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTFNV 122
           V+  V   +++ G+++V V+ AG        +   G +H  S + F+  + ++ VG   +
Sbjct: 74  VKSFVAQAEEALGEIEVLVSGAG--------DTYFGKLHEISTEQFESQVQIHLVGANRL 125

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           A      + E +      RG +I   S  A   +    AY A+K+G+  M   +  +L G
Sbjct: 126 ATAVLPGMIERR------RGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEG 179

Query: 183 AGIRVNTIAPG 193
            G+R + + PG
Sbjct: 180 TGVRASIVHPG 190

Length = 274

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 24/209 (11%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFA--PVDVTSE 62
           L+TG +SGLG         +G  + LC   T   E +  EL    P +K A   +DV   
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 63  EDVQKAVLLCKDSFGKLD-VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           + V +     +D  G LD V VN AGI    ++     GT       K     N V    
Sbjct: 66  DQVFEVFAEFRDELGGLDRVIVN-AGIGKGARL-----GTGK-FWANKATAETNFVAALA 118

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMTLPMARDL 180
               + ++  E         G ++  +S++A  G  G   AY+ASK+G+  +   +  +L
Sbjct: 119 QCEAAMEIFREQG------SGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAEL 172

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRN 209
           A   I+V+TI PG   +     +N K ++
Sbjct: 173 AKTPIKVSTIEPGYIRSE----MNAKAKS 197

Length = 248

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 57.1 bits (138), Expect = 8e-10
 Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 23/205 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPV---- 57
           LKG V L+ GGA  LG      +  +G + V     ++  ++ A+E    VK A      
Sbjct: 6   LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65

Query: 58  ---DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILL 113
              D+T+   V+K     K +FG+ D+ +N  G     K+    K  V  S  ++  +  
Sbjct: 66  FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVG-----KVL--KKPIVEISEAEYDEMFA 118

Query: 114 VNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
           VN+   F   + + +      LN++G + V + T+ + A+       AY+ SK+ +   T
Sbjct: 119 VNSKSAFFFIKEAGR-----HLNDNG-KIVTLVTSLLGAFTP--FYSAYAGSKAPVEHFT 170

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTP 198
              +++    GI V  + PG  DTP
Sbjct: 171 RAASKEFGARGISVTAVGPGPMDTP 195

Length = 257

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 58/220 (26%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLC--------DLPTSEGESVAKEL---GP 50
           L G    +TG + G+G A   R  R+G  +V+          LP +   + A+E+   G 
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTI-HTAAEEIEAAG- 61

Query: 51  DVKFAPV--DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG-ISCAFKIFNYNKGTVHSLDD 107
             +  P+  DV  E+ V  AV    + FG +D+ VN A  I+          GT  +   
Sbjct: 62  -GQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLT--------GTEDT--P 110

Query: 108 FKRILL---VNTVGTFNVARLSAQLIHENKLNEDGLRG------------VIINTASIAA 152
            KR  L   +N  GTF V++  A L H        L+             + ++    A 
Sbjct: 111 MKRFDLMQQINVRGTFLVSQ--ACLPH--------LKKSENPHILTLSPPLNLDPKWFAP 160

Query: 153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAP 192
           +       AY+ +K G+   TL +A +    GI VN + P
Sbjct: 161 H------TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 62/203 (30%), Positives = 89/203 (43%), Gaps = 35/203 (17%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           V LVTG +SG+GKAT  R+  +G  V        + E +A  LG  V    +DVT E  +
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLG--VHPLSLDVTDEASI 61

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTFNVA 123
           + AV       G++DV VN AG            G +    +D+ +R   VN    F  A
Sbjct: 62  KAAVDTIIAEEGRIDVLVNNAGYGSY--------GAIEDVPIDEARRQFEVN---LFGAA 110

Query: 124 RLSAQLI--HENKLNEDGLRGVIINTASIAAYEGQSGQVA------YSASKSGIVGMTLP 175
           RL+ QL+  H          G IIN +S+       G++       Y A+K  + G +  
Sbjct: 111 RLT-QLVLPHMRAQR----SGRIINISSMG------GKIYTPLGAWYHATKFALEGFSDA 159

Query: 176 MARDLAGAGIRVNTIAPGLFDTP 198
           +  ++A  GI V  I PG   T 
Sbjct: 160 LRLEVAPFGIDVVVIEPGGIKTE 182

Length = 273

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 55.1 bits (133), Expect = 5e-09
 Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 45/269 (16%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKE---LGPDVKFAP 56
           +  G V LVTG + G+GKA   R+  EG  + +    +    E  A+E   LG       
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVK 60

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            +V   E +++      + FG+LDV VN           N   G +      +  + +  
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVN-----------NAASGVL------RPAMELEE 103

Query: 117 VG---TFNVARLS----AQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
                T N+   +    AQ     KL E    G II+ +S+ +            SK+ +
Sbjct: 104 SHWDWTMNINAKALLFCAQ--EAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAAL 161

Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS-------MLNEKVRNFLARSIPAPQRLG 222
             +T  +A +LA  GI VN ++ G  DT  L        +L +      A       R+ 
Sbjct: 162 EALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPA------GRMV 215

Query: 223 HPDEFAQLVQSIITNP--LINGEVIRIDG 249
            P++ A  V  + +    +I G+ I +DG
Sbjct: 216 EPEDVANAVLFLCSPEADMIRGQTIIVDG 244

Length = 250

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 6e-09
 Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 35/200 (17%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESV---AKELGPDVKFAPVDVTSEED 64
           L+TG  SG G+    R+ R+G  V+       +  ++   A   G  ++   +D+T   D
Sbjct: 6   LITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAID 65

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHS--LDDFKRILLVNTVGTFNV 122
             +A          +DV +N AGI  A        G V    ++  + +   N  G   +
Sbjct: 66  RAQAAEW------DVDVLLNNAGIGEA--------GAVVDIPVELVRELFETNVFGPLEL 111

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIA-----AYEGQSGQVAYSASKSGIVGMTLPMA 177
            +   + +          +G ++ T+S+A      + G     AY ASK  +  +   M 
Sbjct: 112 TQGFVRKMVARG------KGKVVFTSSMAGLITGPFTG-----AYCASKHALEAIAEAMH 160

Query: 178 RDLAGAGIRVNTIAPGLFDT 197
            +L   GI+V T+ PG + T
Sbjct: 161 AELKPFGIQVATVNPGPYLT 180

Length = 257

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 54.2 bits (130), Expect = 1e-08
 Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 24/268 (8%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
             +VTG A  +G +    + +EG RVVL     S   +       + +     VT + D+
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVL-HYHRSAAAASTLAAELNARRPNSAVTCQADL 61

Query: 66  QKAVLL----------CKDSFGKLDVNVNCAGISCAFKIF-------NYNKGTVHSLDDF 108
             +  L          C  +FG+ DV VN A       +          +K ++      
Sbjct: 62  SNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEV--QV 119

Query: 109 KRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSG 168
             +   N +  + + +  AQ     +  +      I+N       +   G   Y+ +K  
Sbjct: 120 AELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHA 179

Query: 169 IVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           + G+T   A +LA   IRVN +APGL   P    +  +V+    R +P  QR    ++ A
Sbjct: 180 LEGLTRSAALELAPLQIRVNGVAPGLSLLP--DAMPFEVQEDYRRKVPLGQREASAEQIA 237

Query: 229 QLVQSIITNP--LINGEVIRIDGALRMI 254
            +V  +++     I G  I++DG L + 
Sbjct: 238 DVVIFLVSPKAKYITGTCIKVDGGLSLT 265

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 31/198 (15%)

Query: 9   VTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEED 64
           VTG   G+GKA  E + + G  V+L      + ++VAKE+    G + K    D ++ +D
Sbjct: 6   VTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAGDD 65

Query: 65  VQKAVLLCKDSFGKLDVN--VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           + + +   +     LD+   VN  GIS +   +          D+ + I+ VN + T  +
Sbjct: 66  IYERI---EKELEGLDIGILVNNVGISHSIPEYFLET----PEDELQDIINVNVMATLKM 118

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV------AYSASKSGIVGMTLPM 176
            RL    + + K      +G I+N +S A      G +       YSASK+ +   +  +
Sbjct: 119 TRLILPGMVKRK------KGAIVNISSFA------GLIPTPLLATYSASKAFLDFFSRAL 166

Query: 177 ARDLAGAGIRVNTIAPGL 194
             +    GI V ++ P L
Sbjct: 167 YEEYKSQGIDVQSLLPYL 184

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 50/202 (24%), Positives = 77/202 (38%), Gaps = 38/202 (18%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG---PDVKFAPVDVTSEED 64
           L+TG  SG+GK       ++G +V+ C       +SV  EL     ++     DVT    
Sbjct: 5   LITGATSGIGKQLALDYAKQGWQVIAC----GRNQSVLDELHTQSANIFTLAFDVTDHPG 60

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-------FKRILLVNTV 117
            + A+                + +    +++ +N G    +DD         R+  VN +
Sbjct: 61  TKAAL----------------SQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVL 104

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G  N        +        G R VI+   SIA+        AY ASK+ +      + 
Sbjct: 105 GVANCIEGIQPHL------SCGHRVVIV--GSIASELALPRAEAYGASKAAVAYFARTLQ 156

Query: 178 RDLAGAGIRVNTIAPGLFDTPL 199
            DL   GI V T+ PG   TPL
Sbjct: 157 LDLRPKGIEVVTVFPGFVATPL 178

Length = 240

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 46/207 (22%)

Query: 8   LVTGGASGLGKATVERIVREGGRVV--------LCDLPTSEGESVAKELGPDVKFAPVDV 59
            +TG +SG G+   ER++  G RV         L DL    G+         +    +DV
Sbjct: 6   FITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDR--------LWVLQLDV 57

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTV 117
           T    V+  V     + G++DV V+ AG    + +F    G    L D   +R +  N +
Sbjct: 58  TDSAAVRAVVDRAFAALGRIDVVVSNAG----YGLF----GAAEELSDAQIRRQIDTNLI 109

Query: 118 GTFNVARLSAQLIHENKLNEDGLR----GVIINTASI---AAYEGQSGQVAYSASKSGIV 170
           G+  V R  A L H        LR    G I+  +S     AY G S    Y A+K GI 
Sbjct: 110 GSIQVIR--AALPH--------LRRQGGGRIVQVSSEGGQIAYPGFS---LYHATKWGIE 156

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDT 197
           G    +A+++A  GI    + PG   T
Sbjct: 157 GFVEAVAQEVAPFGIEFTIVEPGPART 183

Length = 276

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 51.8 bits (124), Expect = 5e-08
 Identities = 53/263 (20%), Positives = 90/263 (34%), Gaps = 36/263 (13%)

Query: 5   VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK--ELGPDVKFAPVDVTSE 62
            + LVT      G A+ E +  +G  VV  D   ++           P  K       SE
Sbjct: 2   SIALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAERQAFESENPGTK-----ALSE 56

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFK-IFNYN----KGTVHSLDDFKRILLVNTV 117
           +  ++ V     + G +DV V+   I      I   +    +    +L       L+   
Sbjct: 57  QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALS-IFPFALLQAA 115

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
               +A++                G II   S    +  +    Y  +++  V +   +A
Sbjct: 116 ----IAQMKKAG-----------GGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLA 160

Query: 178 RDLAGAGIRVNTIAPGLFDTPL-----LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
           ++L+   I V  I P  F++P          N ++R  + R +P   RLG PDE   LV 
Sbjct: 161 KELSRDNILVYAIGPNFFNSPTYFPTSDWENNPELRERVKRDVPL-GRLGRPDEMGALVA 219

Query: 233 SII--TNPLINGEVIRIDGALRM 253
            +       I G+     G    
Sbjct: 220 FLASRRADPITGQFFAFAGGYLP 242

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 50.9 bits (123), Expect = 6e-08
 Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 24/168 (14%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGR-VVLC---DLPTSEGESVAKEL---GPDVKFAP 56
           G   L+TGG  GLG+A    +   G R +VL            ++  EL   G  V    
Sbjct: 1   GTY-LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVA 59

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DV   + +   +       G L   ++ AG+     + +       + + F  +L    
Sbjct: 60  CDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLAS------LTPERFAAVLAPKA 113

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA 164
            G +N+  L+A         +  L    +  +SIA   G  GQ  Y+A
Sbjct: 114 AGAWNLHELTA---------DLPLD-FFVLFSSIAGVLGSPGQANYAA 151

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 51.0 bits (122), Expect = 6e-08
 Identities = 49/233 (21%), Positives = 80/233 (34%), Gaps = 58/233 (24%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTGG+ G+G A    +   G   VL                         V S      
Sbjct: 2   LVTGGSGGIGGAIARWLASRGSPKVL-------------------------VVS------ 30

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK--RILLVNTVGTFNVARL 125
                     + DV V+ A I         + G +  L   +  R +  N VGT  +   
Sbjct: 31  ----------RRDVVVHNAAIL--------DDGRLIDLTGSRIERAIRANVVGTRRLLEA 72

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
           + +L+   +L      G  I  +S+A   G  G   Y+ASK+ + G+    A +  G G+
Sbjct: 73  ARELMKAKRL------GRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGL 126

Query: 186 RVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
               +A G +    ++         L        R   P+E A+ + + +  P
Sbjct: 127 PATAVACGTWAGSGMAKGPVAPEEILGNRRHG-VRTMPPEEVARALLNALDRP 178

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 7e-08
 Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 36/265 (13%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDVTSEEDV 65
           LVT  + G+G      ++++G RVV+        E   KEL    +V     D++ ++D+
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDL 63

Query: 66  QKAVLLCKDSFGKLDVNV-NCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNTVGTFNV 122
           +  V    +  G +D  V N   + C           +H     D+    L++ V    +
Sbjct: 64  KNLVKEAWELLGGIDALVWNAGNVRC-------EPCMLHEAGYSDWLEAALLHLVAPGYL 116

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
             L  Q   E K+     +GV++  +S++  E     V    +++G+V +   ++R   G
Sbjct: 117 TTLLIQAWLEKKM-----KGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGG 171

Query: 183 AGIRVNTIAPGLFDTP----LLSMLNEKV---------RNFLARSIPAP-QRLGHPDEFA 228
            GIR  T+  G FDTP     L+ + E+          R  L R+   P +R G  +E  
Sbjct: 172 KGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT---PLKRTGRWEELG 228

Query: 229 QLVQSIITN--PLINGEVIRIDGAL 251
            L+  +++     + G  I  DGA+
Sbjct: 229 SLIAFLLSENAEYMLGSTIVFDGAM 253

Length = 259

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 51.0 bits (123), Expect = 9e-08
 Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 27/203 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           LK  + LVTG   G+G+       R G  V+L      + E+V  E+    GP     P+
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPL 69

Query: 58  DV--TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV-----HSLDDFKR 110
           D+   + ++ Q+     ++ FG+LD  ++ AG+           G +        + ++ 
Sbjct: 70  DLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLL----------GELGPMEQQDPEVWQD 119

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
           ++ VN   TF    L+  L+     +       ++ T+S    +G++   AY+ SK    
Sbjct: 120 VMQVNVNATF---MLTQALLPLLLKSPAA---SLVFTSSSVGRQGRANWGAYAVSKFATE 173

Query: 171 GMTLPMARDLAGAGIRVNTIAPG 193
           GM   +A +  G  +RVN I PG
Sbjct: 174 GMMQVLADEYQGTNLRVNCINPG 196

Length = 247

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 44/271 (16%)

Query: 2   LKGVVGLVTGG--ASGLGKATVERIVREGGRVVLC-------DLP----TSEGESVAKEL 48
           LK  V +VTG     G+G A  + +   G  +          ++P      E   + +EL
Sbjct: 4   LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEEL 63

Query: 49  ---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
              G  V    +D+T  +  ++ +    +  G   + VN A  S      +++  T   L
Sbjct: 64  LKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNN---DFSNLTAEEL 120

Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-----GQV 160
           D   +  +VN   T     LS+Q     +  +    G IIN  S     GQ      G++
Sbjct: 121 D---KHYMVNVRATT---LLSSQFA---RGFDKKSGGRIINMTS-----GQFQGPMVGEL 166

Query: 161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQR 220
           AY+A+K  I  +T  +A ++A  GI VN I PG  DT     + E+++  L    P   R
Sbjct: 167 AYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDT---GWMTEEIKQGLLPMFPF-GR 222

Query: 221 LGHPDEFAQLVQSIITN--PLINGEVIRIDG 249
           +G P + A+L++ + +     I G++I  +G
Sbjct: 223 IGEPKDAARLIKFLASEEAEWITGQIIHSEG 253

Length = 256

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 48.4 bits (115), Expect = 4e-07
 Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 3/102 (2%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVD 58
           L G V +VTGG  G+G+ T   + ++G +V++ D+    G++  +E   LG +  F   D
Sbjct: 14  LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYD 73

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKG 100
           +  + D Q+ + +  ++F ++D+    AG+     IF+  + 
Sbjct: 74  MEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQE 115

Length = 169

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 20/128 (15%)

Query: 133 NKLNEDGLRGVIINTASI------AAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIR 186
           N   ED LRG     + I         +G    +AY+ASK+ +  MTL  A  LA   ++
Sbjct: 113 NLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLA-PEVK 171

Query: 187 VNTIAPGLFDTPLLSMLNEK-----VRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
           VN+IAP L       + NE       +  LA+S+      G  +E   LV  ++T+  + 
Sbjct: 172 VNSIAPALI------LFNEGDDAAYRQKALAKSL-LKIEPG-EEEIIDLVDYLLTSCYVT 223

Query: 242 GEVIRIDG 249
           G  + +DG
Sbjct: 224 GRSLPVDG 231

Length = 236

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 48.8 bits (116), Expect = 7e-07
 Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 19/121 (15%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTGGA  +G   VER++  G  V   D            L   V+F  +D+T  + V +
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDR----LRDGLDPLLSGVEFVVLDLTDRDLVDE 59

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
                       D  ++ A  S              +  D    L VN  GT N+   + 
Sbjct: 60  LAKGVP------DAVIHLAAQS---------SVPDSNASDPAEFLDVNVDGTLNLLEAAR 104

Query: 128 Q 128
            
Sbjct: 105 A 105

Length = 314

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 22/123 (17%)

Query: 8   LVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQ 66
           LVTGG+   G+  V++++  GG  V   D+    GE+++    P+++F   D+T   DV+
Sbjct: 3   LVTGGSGFFGERLVKQLLERGGTYVRSFDIAPP-GEALSAWQHPNIEFLKGDITDRNDVE 61

Query: 67  KAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLS 126
           +A                 +G  C F         V           VN  GT NV    
Sbjct: 62  QA----------------LSGADCVFHTAAI----VPLAGPRDLYWEVNVGGTQNVLDAC 101

Query: 127 AQL 129
            + 
Sbjct: 102 QRC 104

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 27/209 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L     LVTG + GLG+   +     G  V+L      + E V   +     P+      
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRF 63

Query: 58  DVTSEEDV---QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
           D+ S E+    Q A  + + + GKLD  V+CAG   A    ++      ++ ++     +
Sbjct: 64  DLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDF-----QTVAEWVNQYRI 118

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVII----NTASIAAYEGQSGQVAYSASKSGIV 170
           NTV    + R    L     L +     VI     +  +  AY G      + ASK+ + 
Sbjct: 119 NTVAPMGLTRALFPL-----LKQSPDASVIFVGESHGETPKAYWG-----GFGASKAALN 168

Query: 171 GMTLPMARDLAGAG-IRVNTIAPGLFDTP 198
            +    A +    G +R N + PG  ++P
Sbjct: 169 YLCKVAADEWERFGNLRANVLVPGPINSP 197

Length = 239

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 69/254 (27%), Positives = 101/254 (39%), Gaps = 47/254 (18%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEED 64
           +V  GA G+G+A   R V  G +V+L D      E+ AK L   G DV    VDV+S E 
Sbjct: 5   VVVIGAGGIGQAIARR-VGAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES 63

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCA-------FKIFNYNKGTVHSLDDFKRILLVNTV 117
           V+ A+     + G +   V+ AG+S +        K+  Y  GT   L++F +++     
Sbjct: 64  VK-ALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLY--GTALVLEEFGKVIAPGGA 120

Query: 118 G--------------TFNVARLSAQLIHENKLNEDGLR-GVIINTASIAAYEGQSGQVAY 162
           G              T    R  A    E  L+   L+   I ++             AY
Sbjct: 121 GVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSL-----------HAY 169

Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP-----LLSMLNEKVRNFLARSIPA 217
             +K       +  A      G R+N+I+PG+  TP     L     +  RN  A+S   
Sbjct: 170 QIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS--P 227

Query: 218 PQRLGHPDEFAQLV 231
             R G PDE A L 
Sbjct: 228 AGRPGTPDEIAALA 241

Length = 275

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 49/215 (22%), Positives = 78/215 (36%), Gaps = 32/215 (14%)

Query: 8   LVTGGASGLGKATVERIVREGGR-VVLCDL--PTSEGESVAKEL---GPDVKFAPVDVTS 61
           L+TGG  GLG      +   G R +VL     P     + A  L   G  V     DVT 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVNTVGT 119
              +  A+L    + G L   ++ AG+             +   +   F  +L     G 
Sbjct: 214 PAALA-ALLAELAAGGPLAGVIHAAGV--------LRDALLAELTPAAFAAVLAAKVAGA 264

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
            N+  L+  L             V+   +S+AA  G +GQ AY+A+ +        +A  
Sbjct: 265 LNLHELTPDL--------PLDFFVL--FSSVAALLGGAGQAAYAAANA----FLDALAAQ 310

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS 214
               G+   ++  G +    +      +R  LARS
Sbjct: 311 RRRRGLPATSVQWGAWAGGGM-AAAAALRARLARS 344

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 66/254 (25%), Positives = 101/254 (39%), Gaps = 42/254 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE--------SVAKEL---GP 50
           L G    +TG + G+GKA   +  R+G  VV+    T+E          + A+E+   G 
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIA-AKTAEPHPKLPGTIYTAAEEIEAAGG 59

Query: 51  DVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA-GISCAFKIFNYNKGTVHSLDDFK 109
                 VD+  E+ V+ AV    + FG +D+ VN A  IS          GT+ +    K
Sbjct: 60  KALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLT--------GTLDT--PMK 109

Query: 110 RILL---VNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--SGQVAYSA 164
           R  L   VNT GT+  ++  A L +  K         I+N +       +      AY+ 
Sbjct: 110 RYDLMMGVNTRGTYLCSK--ACLPYLKKSKNPH----ILNLSPPLNLNPKWFKNHTAYTM 163

Query: 165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHP 224
           +K G+    L MA +    GI VN + P        + +     N L     A      P
Sbjct: 164 AKYGMSMCVLGMAEEFKPGGIAVNALWP-------RTAIATAAMNMLGGVDVA-ACCRKP 215

Query: 225 DEFAQLVQSIITNP 238
           +  A    +I+T P
Sbjct: 216 EIMADAAYAILTKP 229

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 46.2 bits (110), Expect = 6e-06
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   +VTGG SGLG  T   + + G  V++              +   V+   +D+  
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-DGVEVVMLDLAD 82

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGI 88
            E V+       DS  ++D+ +N AG+
Sbjct: 83  LESVRAFAERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 45.5 bits (108), Expect = 7e-06
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 29/219 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREG------GRVVLCDLPTSEGESVAKELGPDVKFA 55
           L G + LVTG + G+G+    ++   G      GR +L  LP +  E   +  G      
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEE--IEARGGKCIPV 58

Query: 56  PVDVTSEEDVQKAV-LLCKDSFGKLDVNVNCAGISCAFKIFNYNKG----TVHSLDDFKR 110
             D + +++V+     + ++  G+LD+ VN A  +    +    K          DD   
Sbjct: 59  RCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDD--- 115

Query: 111 ILLVNTVGTFNVARLSAQLI---HENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKS 167
              +N VG      L A      +   L     +G+I+  +S    E     VAY   K+
Sbjct: 116 ---INNVG------LRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLF-NVAYGVGKA 165

Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK 206
            I  M   MA +L   G+ V ++ PG   T L+  + E 
Sbjct: 166 AIDRMAADMAHELKPHGVAVVSLWPGFVRTELVLEMPED 204

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 44/217 (20%), Positives = 83/217 (38%), Gaps = 26/217 (11%)

Query: 5   VVGLVTGGASGLGKATVERIVR----EGGRVVLCD-----LPTSEGESVAKELGPDVKFA 55
            V LVTG + G G+   + + +     G  +VL       L   + E  A+  G  V   
Sbjct: 1   AVCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRV 60

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-------SLDDF 108
            +D+ +E  ++            L       G+     +   N GT+         L D 
Sbjct: 61  SLDLGAEAGLE-------QLLKALRELPRPKGLQRL--LLINNAGTLGDVSKGFVDLSDS 111

Query: 109 KRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSG 168
            ++     +   ++  L++ ++   K +  GL   ++N +S+ A +   G   Y A K+ 
Sbjct: 112 TQVQNYWALNLTSMLCLTSSVLKAFK-DSPGLNRTVVNISSLCAIQPFKGWALYCAGKAA 170

Query: 169 IVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE 205
              +   +A +     +RV   APG+ DT +   + E
Sbjct: 171 RDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVRE 207

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 31/203 (15%)

Query: 4   GVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTS---EGESVAKELGPDVKFAPVD 58
           G   L+TG A+   +     + +   G  +     P +     E +A+ LG      P D
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           V+++E++++     K  +GKLD  V+    S AF      KG     S   F + L ++ 
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVH----SIAFAPKVQLKGPFLDTSRKGFLKALDISA 116

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA------YEGQSGQVAYSASKSGIV 170
               ++A+          +   G  G I+  + + +      Y      VA +A +S + 
Sbjct: 117 YSLVSLAK------AALPIMNPG--GSIVTLSYLGSERVVPGYNVMG--VAKAALESSVR 166

Query: 171 GMTLPMARDLAGAGIRVNTIAPG 193
                +A +L   GIRVN I+ G
Sbjct: 167 ----YLAYELGRKGIRVNAISAG 185

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 55/277 (19%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE------GESVAKELGPDVKFA 55
           L G +   T  + G+G      + R G  V+L  L  +E       E +  E   DV + 
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVIL--LSRNEENLKKAREKIKSESNVDVSYI 63

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-------SLDDF 108
             D+T  ED+++ V   K+  G+ D             IF ++ G          S++D+
Sbjct: 64  VADLTKREDLERTVKELKN-IGEPD-------------IFFFSTGGPKPGYFMEMSMEDW 109

Query: 109 K---RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
           +   ++LL   V       L+  L+    +   G  G II + S+A  E        +  
Sbjct: 110 EGAVKLLLYPAV------YLTRALV--PAMERKGF-GRIIYSTSVAIKEPIPNIALSNVV 160

Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARS 214
           +  + G+   +A++L   GI VN I PG+  T  +  L            E+     A+ 
Sbjct: 161 RISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP 220

Query: 215 IPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDG 249
           IP   RLG P+E   LV  + ++    ING +I +DG
Sbjct: 221 IPL-GRLGEPEEIGYLVAFLASDLGSYINGAMIPVDG 256

Length = 263

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPV 57
            G V +VTG  +GLG  T   +  +G  VVL      +G++ A  +     G DV    +
Sbjct: 15  SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQEL 74

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGI 88
           D+TS   V+ A    + ++ ++D+ +N AG+
Sbjct: 75  DLTSLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 21/193 (10%)

Query: 8   LVTGGASGLGKATVERIVREGGR-----VVLCDLPTSEG--ESVAKELGPDVKFAPVDVT 60
           L+TG +SG+G     R+  +  +       + DL       E+     G  ++   +DV 
Sbjct: 4   LITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQLDVC 63

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
             + V  AV    +    +DV V  AG+     +         S D    +  VN  GT 
Sbjct: 64  DSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPL------EALSEDAMASVFDVNVFGT- 114

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R+    + + K    G    I+ T+S+   +G      Y ASK  + G+   +A  L
Sbjct: 115 --VRMLQAFLPDMKRRGSGR---ILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQL 169

Query: 181 AGAGIRVNTIAPG 193
               + ++ I  G
Sbjct: 170 LPFNVHLSLIECG 182

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 42.6 bits (100), Expect = 7e-05
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 28/210 (13%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVD 58
           G   L+TG  SG+GKA    I + GG V +     +  E   KE+       ++    VD
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           ++  + V + V   K+   KL V +N AG  C       NK  +   D  ++    NT+G
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAG--CMV-----NKRELTE-DGLEKNFATNTLG 112

Query: 119 TFNVARLSAQLIHENKLNED---------GLRGVIINTASIAAYEGQ-SGQVAYSASKSG 168
           T+    L+  LI   +  ED         G+    +NT ++ +      G + Y+ +K  
Sbjct: 113 TY---ILTTHLIPVLEKEEDPRVITVSSGGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQ 169

Query: 169 IVGMTLPMARDLAGAGIRVNTIAPGLFDTP 198
            V MT   A+      I  + + PG  DTP
Sbjct: 170 QVIMTEQWAK--KHPEIHFSVMHPGWADTP 197

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 10/97 (10%)

Query: 162 YSASKSGIVGMTLPMAR-DLAGAGIRVNTIAPGLFDTPLL----SMLNEKVRNFLARSIP 216
           Y  SK  ++  T+  A+      GIRVN +APG   TP+L    SML ++    +     
Sbjct: 137 YQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQE---RVDSDAK 193

Query: 217 APQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGAL 251
              R    DE A ++  + ++    ING  + +DG L
Sbjct: 194 RMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGL 230

Length = 241

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 9e-05
 Identities = 60/270 (22%), Positives = 102/270 (37%), Gaps = 42/270 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLC-----DLPTSEGESVAKELGPDVKFAP 56
           +KG   +++GG  G+GKA V    + G  +        +      E + ++ G   K  P
Sbjct: 6   MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRI----- 111
           +++   E  ++      + F ++D  ++ A I          +  V     F R+     
Sbjct: 66  LNILEPETYKELFKKIDEDFDRVDFFISNAII--------SGRAVVGGYTKFMRLKPKGL 117

Query: 112 --LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS------IAAYEGQSGQVAYS 163
             +   TV  F V    A      K  E    G II+ +S      I  Y G      + 
Sbjct: 118 NNIYTATVNAFVVGAQEAA-----KRMEKVGGGSIISLSSTGNLVYIENYAG------HG 166

Query: 164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRL 221
            SK+ +  M    A +L    IRVN ++ G  DT  L      E+V+       P   R+
Sbjct: 167 TSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL-NRM 225

Query: 222 GHPDEFAQLVQSIITN--PLINGEVIRIDG 249
           G P++ A     + +     + G+ I +DG
Sbjct: 226 GQPEDLAGACLFLCSEKASWLTGQTIVVDG 255

Length = 260

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 42/206 (20%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAK--ELGPDVKFAPV 57
           M K V  L+TG +SG+G      + R G RV+  C  P    + VA+   LG    F  +
Sbjct: 1   MQKSV--LITGCSSGIGLEAALELKRRGYRVLAACRKP----DDVARMNSLG----FTGI 50

Query: 58  --DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFN------YNKGTVHSLDDFK 109
             D+   E V++A     D    L  N         + +FN      Y   +  S    +
Sbjct: 51  LLDLDDPESVERAA----DEVIALTDN-------RLYGLFNNAGFGVYGPLSTISRQQME 99

Query: 110 RILLVNTVGTFNVAR--LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKS 167
           +    N  GT  +    L A L H          G I+ T+S+       G+ AY+ASK 
Sbjct: 100 QQFSTNFFGTHQLTMLLLPAMLPHGE--------GRIVMTSSVMGLISTPGRGAYAASKY 151

Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPG 193
            +   +  +  +L  +GI+V+ I PG
Sbjct: 152 ALEAWSDALRMELRHSGIKVSLIEPG 177

Length = 256

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 39/267 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L G   L+TG + G+G A  E    EG  + L        E++A +L    G DV    +
Sbjct: 5   LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
           D++S E  ++         G +D+ VN AG            G +  +DD  ++    + 
Sbjct: 65  DLSSPEAREQLA----AEAGDIDILVNNAG--------AIPGGGLDDVDDAAWRAGWELK 112

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G  ++ RL+       ++   G  GVI+N    A     +  +  SA  + ++  T  
Sbjct: 113 VFGYIDLTRLAYP-----RMKARG-SGVIVNVIGAAGENPDADYICGSAGNAALMAFTRA 166

Query: 176 MARDLAGAGIRVNTIAPG---------LFDTPLLSMLNEKVR-NFLARSIPAPQRLGHPD 225
           +       G+RV  + PG         L      + L ++ R   L   +P   R   P+
Sbjct: 167 LGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPL-GRPATPE 225

Query: 226 EFAQLVQSIITNP---LINGEVIRIDG 249
           E A LV + + +P     +G V+ +DG
Sbjct: 226 EVADLV-AFLASPRSGYTSGTVVTVDG 251

Length = 259

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 22/117 (18%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           L+TGG    G      + + G  V+L D+         +EL   +KF   DV     ++K
Sbjct: 3   LITGGGGYFGFRLGCALAKSGVHVILFDI-----RRPQQELPEGIKFIQADVRDLSQLEK 57

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
           AV                AG+ C F I +Y       L+  + I  +N  GT N+ +
Sbjct: 58  AV----------------AGVDCVFHIASYGMSGREQLNR-ELIEEINVRGTENIIQ 97

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 51/273 (18%), Positives = 107/273 (39%), Gaps = 61/273 (22%)

Query: 8   LVTGGASGLGKATVERIVREGGRVV-LCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQ 66
           ++TG + GLG+A   +++ +G  V+ +      E   +A++   ++ F  +D+    +++
Sbjct: 5   IITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELE 64

Query: 67  KAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN----V 122
                    F ++  ++                      D+   I L+N  G       +
Sbjct: 65  TN-------FNEILSSIQ--------------------EDNVSSIHLINNAGMVAPIKPI 97

Query: 123 ARLSAQLIHEN----------------KLNED-GLRGVIINTASIAAYEGQSGQVAYSAS 165
            +  ++ +  N                K  +D  +   +IN +S AA     G  AY +S
Sbjct: 98  EKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSS 157

Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIA--PGLFDTPLLSMLNE-------KVRNFLARSIP 216
           K+G+   T  +A +       V  +A  PG+ DT + + +          +  F   ++ 
Sbjct: 158 KAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRF--ITLK 215

Query: 217 APQRLGHPDEFAQLVQSIITNPLI-NGEVIRID 248
              +L  P+  A+ +++++      NGEVI ID
Sbjct: 216 EEGKLLSPEYVAKALRNLLETEDFPNGEVIDID 248

Length = 251

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 50/238 (21%), Positives = 80/238 (33%), Gaps = 47/238 (19%)

Query: 5   VVGLVTGGASGLGKATVERIV-----REGGRVVLCDLPTSEGESVAKEL-------GPDV 52
            V LVTG  SGLG A  ER++          ++L        E+  + L           
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLD-VNVNCAGISCAFKIFNYNKGTVHSLDDFKRI 111
            +  VD+++   V  A    K  + +LD + +N AGI       ++       L +    
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLN-AGIM-PNPGIDWIGAIKEVLTNPLFA 119

Query: 112 LLVNTVGTFNVARLSAQ---------------------LIHENK--LNEDGLRGVIINTA 148
           +   T        LS                       LI E +  L        II T+
Sbjct: 120 VTNPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTS 179

Query: 149 SIAA---------YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT 197
           S+ A          +   G   YS+SK  +  ++L + R     G+    + PG+  T
Sbjct: 180 SLNASPKYFSLEDIQHLKGPAPYSSSKYLVDLLSLALNRKFNKLGVYSYVVHPGICTT 237

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 53/207 (25%), Positives = 81/207 (39%), Gaps = 36/207 (17%)

Query: 2   LKGVVGLVTGGAS------GLGKATVERIVREGGRVVLCDLPTSEGESV---AKELGPDV 52
           L+G   L+ G A+      G+ KA  E    +G  +          + V   A+ELG D+
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAE----QGAELAFTYQGERLEKRVEELAEELGSDL 59

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKR 110
              P DVT++E +       K  +GKLD  V+      AF      KG     S + F  
Sbjct: 60  VL-PCDVTNDESIDALFATIKKKWGKLDGLVHSI----AFAPKEELKGDYLDTSREGFLI 114

Query: 111 ILLVNTVGTFNVARLSAQLIHEN----KLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
            + ++      +A+ +  L++       L   G   V+ N      Y      VA    K
Sbjct: 115 AMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPN------YNVMG--VA----K 162

Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPG 193
           + +      +A DL   GIRVN I+ G
Sbjct: 163 AALEASVRYLAADLGKEGIRVNAISAG 189

Length = 259

>gnl|CDD|181162 PRK07904, PRK07904, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 49/195 (25%), Positives = 75/195 (38%), Gaps = 25/195 (12%)

Query: 8   LVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVA----KELGPD----VKFAPVD 58
           L+ GG S +G A  ER ++    RVVL  LP       A    K  G      + F  +D
Sbjct: 12  LLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD 71

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
             S   V         +F   DV+V       AF +    +    +     +I  +N   
Sbjct: 72  TDSHPKV------IDAAFAGGDVDVAIV----AFGLLGDAEELWQNQRKAVQIAEINYTA 121

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
             +V  L  +     K+   G  G II  +S+A    +     Y ++K+G+ G  L +  
Sbjct: 122 AVSVGVLLGE-----KMRAQG-FGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGE 175

Query: 179 DLAGAGIRVNTIAPG 193
            L   G+RV  + PG
Sbjct: 176 ALREYGVRVLVVRPG 190

Length = 253

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 21/157 (13%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLC----DLPTSEGESVAKELGPDVKFAPVDV 59
           G   LVTG   G+GK    ++ R+G  +VL     D      +S+  +     +   V V
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS-KTQIKTVVV 111

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNV--NCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
               D+ + V   K++   LDV V  N  G+S  +  F       H +D+   K ++ VN
Sbjct: 112 DFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARF------FHEVDEELLKNLIKVN 165

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA 152
             GT  V     Q +    L     +G IIN  S AA
Sbjct: 166 VEGTTKV----TQAVLPGMLKRK--KGAIINIGSGAA 196

Length = 320

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 50/248 (20%), Positives = 92/248 (37%), Gaps = 43/248 (17%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK---ELGPDVKFAPVDVTSEED 64
           L+T   S LG+       R G  ++LCD   S  +   +    L  +V    +   S+E 
Sbjct: 9   LITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQES 68

Query: 65  VQKAVLLCKDSFGK-LDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRILLVNTV 117
           ++      +  F +  DV VN            +    + SL      + F + L     
Sbjct: 69  IRHLFDAIEQQFNRAPDVLVNN-----------WTSSPLPSLFDEQPSESFIQQLSSLAS 117

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             F   +++A+ + +        +GVI+N  S   ++  +G     +S + + G T   A
Sbjct: 118 TLFTYGQVAAERMRKRNK-----KGVIVNVISHDDHQDLTG---VESSNALVSGFTHSWA 169

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           ++L    IRV  + P +F        N ++       I         DE  +  + I+ N
Sbjct: 170 KELTPFNIRVGGVVPSIFSA------NGELDAVHWAEI--------QDELIRNTEYIVAN 215

Query: 238 PLINGEVI 245
              +G V+
Sbjct: 216 EYFSGRVV 223

Length = 227

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)

Query: 8  LVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKELGPDVKFAPVDVTSEEDVQ 66
          LVTGGA  +G   VER++  G  V++ D L T + E++  E+ P+VKF   D+  +E V+
Sbjct: 3  LVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENL-PEVKPNVKFIEGDIRDDELVE 61

Query: 67 KAV 69
           A 
Sbjct: 62 FAF 64

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	254
KOG1200|consensus	256		100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
KOG0725|consensus	270		100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
KOG1199|consensus	260		100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
KOG1205|consensus	282		100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
KOG1201|consensus	300		100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1207|consensus	245		100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG4169|consensus	261		100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
KOG1610|consensus	322		100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1208|consensus	314		100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1209|consensus	289		100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
KOG1611|consensus	249		100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
KOG1014|consensus	312		100.0
KOG1210|consensus	331		99.98
PRK09291	257	short chain dehydrogenase; Provisional	99.98
PRK08177	225	short chain dehydrogenase; Provisional	99.98
PRK08264	238	short chain dehydrogenase; Validated	99.98
KOG1204|consensus	253		99.98
PRK08017	256	oxidoreductase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
PLN03209	576	translocon at the inner envelope of chloroplast su	99.94
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.94
KOG1478|consensus	341		99.92
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.92
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.91
PLN02653	340	GDP-mannose 4,6-dehydratase	99.89
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.89
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.88
PLN02583	297	cinnamoyl-CoA reductase	99.88
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.88
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.87
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.87
PLN02572	442	UDP-sulfoquinovose synthase	99.87
PLN02214	342	cinnamoyl-CoA reductase	99.86
PLN00198	338	anthocyanidin reductase; Provisional	99.86
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.86
PLN02650	351	dihydroflavonol-4-reductase	99.86
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.85
PLN02240	352	UDP-glucose 4-epimerase	99.85
PRK06720	169	hypothetical protein; Provisional	99.85
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.84
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.84
KOG1502|consensus	327		99.84
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.83
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.81
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.81
PLN02427	386	UDP-apiose/xylose synthase	99.81
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.81
PLN02686	367	cinnamoyl-CoA reductase	99.81
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.8
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.8
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.8
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.79
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.78
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.78
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.77
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.77
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.76
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.76
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.75
PLN02260	668	probable rhamnose biosynthetic enzyme	99.74
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.74
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.74
PLN02206	442	UDP-glucuronate decarboxylase	99.73
CHL00194	317	ycf39 Ycf39; Provisional	99.73
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.72
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.72
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.71
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.69
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.69
PRK07201	657	short chain dehydrogenase; Provisional	99.64
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.63
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.62
PRK05865	854	hypothetical protein; Provisional	99.62
PLN02996	491	fatty acyl-CoA reductase	99.62
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.59
KOG1430|consensus	361		99.57
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.57
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.56
PLN02778	298	3,5-epimerase/4-reductase	99.55
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.54
KOG1371|consensus	343		99.52
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.49
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.45
PLN00016	378	RNA-binding protein; Provisional	99.44
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.43
PRK12320	699	hypothetical protein; Provisional	99.41
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.4
KOG4022|consensus	236		99.4
PRK08309	177	short chain dehydrogenase; Provisional	99.39
PLN02503	605	fatty acyl-CoA reductase 2	99.36
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.35
PLN02260	668	probable rhamnose biosynthetic enzyme	99.34
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.3
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.27
KOG1429|consensus	350		99.25
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.22
KOG0747|consensus	331		99.22
KOG2865|consensus	391		99.09
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.05
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.98
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.95
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.88
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.86
KOG1372|consensus	376		98.8
COG2910	211	Putative NADH-flavin reductase [General function p	98.79
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.79
KOG1221|consensus	467		98.76
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.74
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.73
KOG1202|consensus	2376		98.67
KOG1431|consensus	315		98.67
KOG1203|consensus	411		98.67
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.62
PRK09620	229	hypothetical protein; Provisional	98.51
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.46
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.42
PLN00106	323	malate dehydrogenase	98.35
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.3
PRK14982	340	acyl-ACP reductase; Provisional	98.27
KOG4039|consensus	238		98.2
KOG2733|consensus	423		98.14
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.09
KOG2774|consensus	366		98.07
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.06
PTZ00325	321	malate dehydrogenase; Provisional	98.05
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	98.01
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.95
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.9
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.89
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.85
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.79
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.77
COG3268	382	Uncharacterized conserved protein [Function unknow	97.76
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.72
PRK06849	389	hypothetical protein; Provisional	97.72
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.69
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.63
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.62
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.61
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.6
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.57
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.57
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.55
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.55
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.55
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.54
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.53
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.51
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.48
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.48
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.47
PRK05086	312	malate dehydrogenase; Provisional	97.46
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.45
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.44
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.44
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.44
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.44
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.43
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.42
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.39
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.35
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.34
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.33
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.33
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.33
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.31
PLN00203	519	glutamyl-tRNA reductase	97.27
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.27
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.25
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.22
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.22
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.2
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.18
KOG1198|consensus	347		97.17
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.17
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.16
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.14
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.14
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	97.13
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.1
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.08
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.05
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.05
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.03
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.02
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	97.01
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.98
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.95
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.95
PRK04148	134	hypothetical protein; Provisional	96.93
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.92
PRK09496	453	trkA potassium transporter peripheral membrane com	96.9
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.88
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.83
PRK05442	326	malate dehydrogenase; Provisional	96.8
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.79
KOG1196|consensus	343		96.78
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.77
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.76
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.75
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.73
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.73
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.68
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.68
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.67
KOG4288|consensus	283		96.67
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.66
PRK08223	287	hypothetical protein; Validated	96.65
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.65
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.64
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.63
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.63
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.62
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.61
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.6
PTZ00117	319	malate dehydrogenase; Provisional	96.59
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.59
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.57
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.57
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.55
PLN02740	381	Alcohol dehydrogenase-like	96.54
PRK08328	231	hypothetical protein; Provisional	96.54
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.53
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.53
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.52
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.51
PLN02494	477	adenosylhomocysteinase	96.51
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.5
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.5
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.5
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.5
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.48
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.48
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.47
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.46
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.46
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.45
PRK09496	453	trkA potassium transporter peripheral membrane com	96.43
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.42
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	96.38
PTZ00354	334	alcohol dehydrogenase; Provisional	96.38
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.37
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.37
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.36
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.36
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.35
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.34
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.34
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.32
PRK08655	437	prephenate dehydrogenase; Provisional	96.3
PRK14968	188	putative methyltransferase; Provisional	96.3
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.29
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.27
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.25
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.25
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.24
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.22
KOG0024|consensus	354		96.22
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.21
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	96.18
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.15
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.14
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	96.13
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.12
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	96.11
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	96.1
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.09
PRK12480	330	D-lactate dehydrogenase; Provisional	96.09
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	96.09
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	96.09
KOG0023|consensus	360		96.08
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	96.05
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.03
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.02
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	96.02
PLN02602	350	lactate dehydrogenase	96.01
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	96.0
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.0
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.98
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.97
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.95
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.95
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.95
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.94
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.92
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.92
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.92
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.9
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	95.9
PRK13243	333	glyoxylate reductase; Reviewed	95.9
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.9
PRK10669	558	putative cation:proton antiport protein; Provision	95.89
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.86
PRK14851	679	hypothetical protein; Provisional	95.86
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	95.86
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.81
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.79
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.79
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.78
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.77
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.76
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.76
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	95.74
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	95.73

>KOG1200|consensus

Probab=100.00  E-value=5.4e-52  Score=309.51  Aligned_cols=241  Identities=34%  Similarity=0.539  Sum_probs=224.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC--CceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++.|.++||||++|||+++++.|+++|++|.+++++....++....++.  +-..+.||++++.+++..+++..+.+|++
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            5678999999999999999999999999999999999998888888854  56789999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      ++++||||+.....+..      ++.++|.+.+.+|+++.|+.+|++...|...+-    .+.+||++||+.+..+.-++
T Consensus        92 svlVncAGItrD~~Llr------mkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~----~~~sIiNvsSIVGkiGN~GQ  161 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLR------MKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ----QGLSIINVSSIVGKIGNFGQ  161 (256)
T ss_pred             cEEEEcCccccccceee------ccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC----CCceEEeehhhhcccccccc
Confidence            99999999988777777      899999999999999999999999998654431    14599999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      ..|+++|+++.+|+|+.|+|++++|||||.|+||++.|||.....+.+.+.+.+++|+ +|++.+||+|..++||+++  
T Consensus       162 tnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPm-gr~G~~EevA~~V~fLAS~~s  240 (256)
T KOG1200|consen  162 TNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPM-GRLGEAEEVANLVLFLASDAS  240 (256)
T ss_pred             hhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCc-cccCCHHHHHHHHHHHhcccc
Confidence            9999999999999999999999999999999999999999999999999999999999 9999999999999999974  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      .|++|+.+.++||+.|
T Consensus       241 sYiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  241 SYITGTTLEVTGGLAM  256 (256)
T ss_pred             ccccceeEEEeccccC
Confidence            7999999999999876

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.9e-48  Score=315.92  Aligned_cols=242  Identities=18%  Similarity=0.226  Sum_probs=207.5

Q ss_pred             CCCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          1 MLKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         1 ml~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +|+||+++||||+  +|||++++++|+++|++|++++|+. +.++..+++ ..++.+++||++|+++++++++++.++++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999  8999999999999999999999984 444444444 44678999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||......+  ..+..+.+.++|++.+++|+.+++.+++.++|.|.+        .++|+++||..+..+.+
T Consensus        83 ~iD~lv~nAg~~~~~~~--~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--------~g~Iv~iss~~~~~~~~  152 (252)
T PRK06079         83 KIDGIVHAIAYAKKEEL--GGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--------GASIVTLTYFGSERAIP  152 (252)
T ss_pred             CCCEEEEcccccccccc--cCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--------CceEEEEeccCccccCC
Confidence            99999999997643211  122334789999999999999999999999999853        47999999999999988


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      .+..|+++|+|+.+|+++++.|++++||+||+|+||+++|++....  .++..+...+..|. +++.+|||+|+.+.||+
T Consensus       153 ~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedva~~~~~l~  231 (252)
T PRK06079        153 NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD-GVGVTIEEVGNTAAFLL  231 (252)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc-cCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999976433  22334445556676 89999999999999999


Q ss_pred             cC--CCcccceEEecCCcccC
Q psy12833        236 TN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~~  254 (254)
                      ++  .+++|+++.+|||+++|
T Consensus       232 s~~~~~itG~~i~vdgg~~~~  252 (252)
T PRK06079        232 SDLSTGVTGDIIYVDKGVHLI  252 (252)
T ss_pred             CcccccccccEEEeCCceecC
Confidence            74  79999999999999886

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-47  Score=313.42  Aligned_cols=238  Identities=24%  Similarity=0.368  Sum_probs=209.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+++++..+++    +.++.++++|++|+++++++++++. .++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g   84 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIG   84 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhC
Confidence            56899999999999999999999999999999999988877776655    4568899999999999999999986 589


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||+|.....++.+      .+.++|++.+++|+.+++.+++.++|.|.+++      .|+||++||..+..+.+
T Consensus        85 ~iD~lv~nag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~------~g~Ii~isS~~~~~~~~  152 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFME------MSMEDWEGAVKLLLYPAVYLTRALVPAMERKG------FGRIIYSTSVAIKEPIP  152 (263)
T ss_pred             CCcEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CCEEEEEcCccccCCCC
Confidence            9999999999765444444      78999999999999999999999999998765      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhcCCCCCCCCCHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  226 (254)
                      ....|+++|+|+.+|+++++.|++++||+||+|+||+++|++.....           ++..+.+.+..|. +++..|+|
T Consensus       153 ~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~d  231 (263)
T PRK08339        153 NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL-GRLGEPEE  231 (263)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc-ccCcCHHH
Confidence            99999999999999999999999999999999999999999764321           2223344556677 99999999


Q ss_pred             HHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        227 FAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       227 va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +|+.+.||++  +.++||+++.+|||..+
T Consensus       232 va~~v~fL~s~~~~~itG~~~~vdgG~~~  260 (263)
T PRK08339        232 IGYLVAFLASDLGSYINGAMIPVDGGRLN  260 (263)
T ss_pred             HHHHHHHHhcchhcCccCceEEECCCccc
Confidence            9999999997  46999999999999864

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.9e-47  Score=312.98  Aligned_cols=241  Identities=19%  Similarity=0.298  Sum_probs=201.9

Q ss_pred             CCCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCCchhH---HHHHHhCCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGE---SVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ||++|++|||||++  |||+++|++|+++|++|++++|+....+   ++.++.+. ..+++||++|+++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHH
Confidence            57899999999996  9999999999999999999998754332   22223332 357899999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +|++|++|||||.....+.  ..+..+.+.++|++.+++|+.++++++|+++|+|.+        .|+||++||..+..+
T Consensus        83 ~g~iD~lVnnAG~~~~~~~--~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--------~G~Iv~isS~~~~~~  152 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNEL--KGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--------GGSMLTLTYGGSTRV  152 (271)
T ss_pred             hCCCCEEEECCccCCCccc--cCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--------CceEEEEcCCCcccc
Confidence            9999999999997542111  012223789999999999999999999999999963        489999999999988


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH--HHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .|.+..|+++|+|+.+|+++|+.|++++||+||+|+||+++|++.....+  ...+...+..|. +++..|||+|+.++|
T Consensus       153 ~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~peeva~~~~f  231 (271)
T PRK06505        153 MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL-RRTVTIDEVGGSALY  231 (271)
T ss_pred             CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc-cccCCHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999998643321  122333445676 889999999999999


Q ss_pred             Hhc--CCCcccceEEecCCccc
Q psy12833        234 IIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |++  +.++||+++.+|||+++
T Consensus       232 L~s~~~~~itG~~i~vdgG~~~  253 (271)
T PRK06505        232 LLSDLSSGVTGEIHFVDSGYNI  253 (271)
T ss_pred             HhCccccccCceEEeecCCccc
Confidence            997  46899999999999864

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-46  Score=311.37  Aligned_cols=240  Identities=18%  Similarity=0.259  Sum_probs=201.4

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCc---hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTS---EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||+  +|||++++++|+++|++|++++|+.+   .++++.++++.. .+++||++|+++++++++++.+.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence            689999999997  79999999999999999999999852   344444444444 678999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.......  ..+..+.+.++|++.+++|+.+++++++.++|.|.+        .++||++||..+..+.
T Consensus        82 g~iDilVnnAG~~~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--------~g~Iv~isS~~~~~~~  151 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEAL--EGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--------GASVLTLSYLGGVKYV  151 (274)
T ss_pred             CCCCEEEECCccCccccc--ccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--------CCcEEEEecCCCccCC
Confidence            999999999997532110  112233789999999999999999999999999964        4799999999999988


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH--HHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |.+..|++||+|+.+|+++++.|++++||+||+|+||+++|++.....+  ...+......|. ++...|+|+|+.+.||
T Consensus       152 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl-~r~~~pedva~~v~fL  230 (274)
T PRK08415        152 PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL-KKNVSIEEVGNSGMYL  230 (274)
T ss_pred             CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch-hccCCHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999987543221  111222334566 8999999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.+++|+++.+|||+.+
T Consensus       231 ~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        231 LSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             hhhhhhcccccEEEEcCcccc
Confidence            97  46999999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-46  Score=305.73  Aligned_cols=240  Identities=26%  Similarity=0.446  Sum_probs=207.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.. ...+..++.+.++.++++|++|+++++++++++.+.++++|
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999988643 22233344467789999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....++.+      .+.++|++.+++|+.+++.+++.+.|.|.+++.     .++||++||..+..+.+...
T Consensus        86 ~lv~~ag~~~~~~~~~------~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-----~g~ii~isS~~~~~~~~~~~  154 (251)
T PRK12481         86 ILINNAGIIRRQDLLE------FGNKDWDDVININQKTVFFLSQAVAKQFVKQGN-----GGKIINIASMLSFQGGIRVP  154 (251)
T ss_pred             EEEECCCcCCCCCccc------CCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC-----CCEEEEeCChhhcCCCCCCc
Confidence            9999999865554444      789999999999999999999999999976531     37999999999999988889


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      .|++||+|+++|+++++.|++++||+||+++||+++|++.....  +...+.....+|. +++.+|||+|+.+.||++  
T Consensus       155 ~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~peeva~~~~~L~s~~  233 (251)
T PRK12481        155 SYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA-SRWGTPDDLAGPAIFLSSSA  233 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999999865432  2233344556777 899999999999999997  


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      +.+++|+++.+|||+++
T Consensus       234 ~~~~~G~~i~vdgg~~~  250 (251)
T PRK12481        234 SDYVTGYTLAVDGGWLA  250 (251)
T ss_pred             ccCcCCceEEECCCEec
Confidence            47999999999999753

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.4e-46  Score=304.72  Aligned_cols=240  Identities=19%  Similarity=0.262  Sum_probs=199.8

Q ss_pred             CCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCCc---hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTS---EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||+++||||++  |||++++++|+++|++|++++|+..   .++++.++.+. ..+++||++|+++++++++++.+++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999997  9999999999999999999988732   12222223232 3467999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||+|......+  ..+..+.+.++|++.+++|+.+++.+++.+.|.|.+        .|+||++||..+..+.
T Consensus        85 g~iDilVnnag~~~~~~~--~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--------~G~Iv~isS~~~~~~~  154 (260)
T PRK06603         85 GSFDFLLHGMAFADKNEL--KGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--------GGSIVTLTYYGAEKVI  154 (260)
T ss_pred             CCccEEEEccccCCcccc--cCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--------CceEEEEecCccccCC
Confidence            999999999997532111  112334789999999999999999999999999953        4899999999999888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +.+..|++||+|+.+|+++++.|++++||+||+++||+++|++.....  ++..+......|. +++..|||+|+.+.||
T Consensus       155 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedva~~~~~L  233 (260)
T PRK06603        155 PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL-KRNTTQEDVGGAAVYL  233 (260)
T ss_pred             CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc-CCCCCHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999754221  2223344455677 8899999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.++||+++.+|||+++
T Consensus       234 ~s~~~~~itG~~i~vdgG~~~  254 (260)
T PRK06603        234 FSELSKGVTGEIHYVDCGYNI  254 (260)
T ss_pred             hCcccccCcceEEEeCCcccc
Confidence            97  47999999999999875

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-46  Score=303.71  Aligned_cols=239  Identities=35%  Similarity=0.509  Sum_probs=210.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.+++||++|+++++++++++.+.+
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999988887777665     3467899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....+..+      .+.++|++.+++|+.+++.++++++|.|.++.      .++||++||..+..+.
T Consensus        85 g~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  152 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLA------MTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG------RGSIVNIASTHAFKII  152 (260)
T ss_pred             CCCcEEEECCCcCCCCChhh------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC------CeEEEEECChhhccCC
Confidence            99999999999764443333      68899999999999999999999999998765      6899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch------HHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      ++...|+++|+|+++|+++++.|++++||+||+|+||+++|++.....      ....+...+..|. +++.+|+|+|..
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~va~~  231 (260)
T PRK07063        153 PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM-KRIGRPEEVAMT  231 (260)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC-CCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999999864321      1122334445676 899999999999


Q ss_pred             HHHHhc--CCCcccceEEecCCccc
Q psy12833        231 VQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++||++  +.+++|+.+.+|||+++
T Consensus       232 ~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        232 AVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             HHHHcCccccccCCcEEEECCCeee
Confidence            999997  46999999999999876

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=6.1e-46  Score=289.45  Aligned_cols=224  Identities=32%  Similarity=0.463  Sum_probs=199.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC-CCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG-PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|+++|||||+|||.++|+.|+++|++|++++|+.+++++++++++ ..+..+..|++|+++++++++.+.+.++++|
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            568999999999999999999999999999999999999999999997 6899999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....++.+      .+.++|++++++|+.|.++.+++++|.|.+++      .|.||++||.++..++|+..
T Consensus        84 iLvNNAGl~~g~~~~~------~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~------~G~IiN~~SiAG~~~y~~~~  151 (246)
T COG4221          84 ILVNNAGLALGDPLDE------ADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK------SGHIINLGSIAGRYPYPGGA  151 (246)
T ss_pred             EEEecCCCCcCChhhh------CCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC------CceEEEeccccccccCCCCc
Confidence            9999999987766666      89999999999999999999999999999998      79999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH-HHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-VRNFLARSIPAPQRLGHPDEFAQLVQSIITNP  238 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  238 (254)
                      .|+++|+++..|++.|+.|+...+|||..++||.+.|..+.....+ ..+...+.-.. ...++|+|+|+.+.|.++.|
T Consensus       152 vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~-~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         152 VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKG-GTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhcc-CCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999977655443221 12222221112 55779999999999999743

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.1e-46  Score=303.58  Aligned_cols=242  Identities=21%  Similarity=0.277  Sum_probs=204.7

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCC---chhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPT---SEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~---~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++||+++||||+  +|||++++++|+++|++|++++|+.   +.++++.+++ +.++.+++||++|+++++++++++.++
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            468999999997  8999999999999999999998753   3455565655 456889999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +|++|++|||||.......  ..+..+.+.++|.+.+++|+.+++++++.++|.|.+        .++||++||..+..+
T Consensus        85 ~g~ld~lv~nag~~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~g~Iv~isS~~~~~~  154 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDL--RGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--------GGSIVTLTYLGGERV  154 (257)
T ss_pred             CCCccEEEECcccCCCCcC--CCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--------CceEEEEcccCCccC
Confidence            9999999999997532111  112233788999999999999999999999999853        489999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .+.+..|+++|+|+.+|+++++.|++++||+||+|+||+++|++.+...  ++..+...+..|. ++..+|+|+|+.++|
T Consensus       155 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~~va~~~~~  233 (257)
T PRK08594        155 VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPL-RRTTTQEEVGDTAAF  233 (257)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCc-cccCCHHHHHHHHHH
Confidence            8889999999999999999999999999999999999999999754321  1222334445666 889999999999999


Q ss_pred             Hhc--CCCcccceEEecCCcccC
Q psy12833        234 IIT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      |++  +.+++|+++.+|||++++
T Consensus       234 l~s~~~~~~tG~~~~~dgg~~~~  256 (257)
T PRK08594        234 LFSDLSRGVTGENIHVDSGYHII  256 (257)
T ss_pred             HcCcccccccceEEEECCchhcc
Confidence            997  479999999999999875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-45  Score=302.68  Aligned_cols=240  Identities=21%  Similarity=0.291  Sum_probs=203.2

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCch---hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSE---GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++||++|||||+  +|||++++++|+++|++|++++|+.+.   ++++.++++ .+.+++||++|+++++++++++.+.+
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   86 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIAEEW   86 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHHHHc
Confidence            579999999998  599999999999999999999998643   344444443 35689999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.......  ..+..+.+.++|++.+++|+.+++++++.++|.|.+        .++|+++||..+..+.
T Consensus        87 g~ld~lv~nAg~~~~~~~--~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--------~g~Ii~iss~~~~~~~  156 (258)
T PRK07533         87 GRLDFLLHSIAFAPKEDL--HGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--------GGSLLTMSYYGAEKVV  156 (258)
T ss_pred             CCCCEEEEcCccCCcccc--cCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--------CCEEEEEeccccccCC
Confidence            999999999997532111  112333789999999999999999999999999953        4799999999998888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +.+..|+++|+|+.+|+++++.|++++||+||+|+||+++|++.+...  ++..+.+.+..|. +++..|+|+|+.++||
T Consensus       157 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~~~~L  235 (258)
T PRK07533        157 ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL-RRLVDIDDVGAVAAFL  235 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc-CCCCCHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999865431  2333344456676 8899999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .+++|+.+.+|||+++
T Consensus       236 ~s~~~~~itG~~i~vdgg~~~  256 (258)
T PRK07533        236 ASDAARRLTGNTLYIDGGYHI  256 (258)
T ss_pred             hChhhccccCcEEeeCCcccc
Confidence            974  7999999999999875

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-45  Score=303.10  Aligned_cols=242  Identities=17%  Similarity=0.183  Sum_probs=201.1

Q ss_pred             CCCcEEEEeCC--CChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGG--ASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGa--s~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||  ++|||+++|++|+++|++|++++|+. +.++..+++   ......++||++|+++++++++++.+++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            68999999997  67999999999999999999988763 222223332   1235679999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||+.....+.. ....+.+.++|+..+++|+.+++++++.+.|.|.++       .++||++||..+..+.
T Consensus        83 g~iD~lVnnAG~~~~~~~~~-~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-------~g~Iv~iss~~~~~~~  154 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSG-DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-------NSAIVALSYLGAVRAI  154 (261)
T ss_pred             CCCcEEEECCccCCcccccc-chhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-------CcEEEEEcccccccCC
Confidence            99999999999864321100 011226788999999999999999999999998654       4799999999999899


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |++..|+++|+|+.+|+++++.|++++||+||+|+||+++|++.....  ++..+.+.+..|. +|+.+|||+|+.+.||
T Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~v~~l  233 (261)
T PRK08690        155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL-RRNVTIEEVGNTAAFL  233 (261)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC-CCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999865432  2333344555677 8999999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.+++|+++.+|||+++
T Consensus       234 ~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        234 LSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             hCcccCCcceeEEEEcCCccc
Confidence            97  47999999999999864

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.3e-45  Score=302.60  Aligned_cols=241  Identities=21%  Similarity=0.300  Sum_probs=201.2

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCc--hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTS--EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~--~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      ++||+++||||+  +|||++++++|+++|++|++++|+.+  +.++..+++   ..++.++++|++|+++++++++++.+
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            379999999986  89999999999999999998876543  223333333   23567899999999999999999999


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                      +++++|++|||||.......  ..+..+.+.++|++.+++|+.+++++++.++|.|.+        .++||++||..+..
T Consensus        84 ~~g~iD~lv~nag~~~~~~~--~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--------~g~Iv~isS~~~~~  153 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEEL--IGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--------GGSIVTLTYLGGVR  153 (258)
T ss_pred             HcCCCCEEEEcccccCcccc--cCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--------CCeEEEEecccccc
Confidence            99999999999997532110  012223789999999999999999999999999964        47999999999999


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      +.|++..|+++|+|+.+|+++|+.|++++||+||+++||+++|++.....  ++..+.+....|. +++..|+|+++.+.
T Consensus       154 ~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~~~  232 (258)
T PRK07370        154 AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPL-RRTVTQTEVGNTAA  232 (258)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCc-CcCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999764321  2223344445666 89999999999999


Q ss_pred             HHhc--CCCcccceEEecCCccc
Q psy12833        233 SIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ||++  +.+++||++.+|||+++
T Consensus       233 fl~s~~~~~~tG~~i~vdgg~~~  255 (258)
T PRK07370        233 FLLSDLASGITGQTIYVDAGYCI  255 (258)
T ss_pred             HHhChhhccccCcEEEECCcccc
Confidence            9997  47999999999999875

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-45  Score=300.44  Aligned_cols=239  Identities=31%  Similarity=0.448  Sum_probs=207.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999988887777665   456888999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-C
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-S  157 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-~  157 (254)
                      +|++|||+|.....++.+      .+.++|++.+++|+.+++.+++++.|.|.++..     .++|+++||..+..+. +
T Consensus        87 id~lv~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~  155 (253)
T PRK05867         87 IDIAVCNAGIITVTPMLD------MPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ-----GGVIINTASMSGHIINVP  155 (253)
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC-----CcEEEEECcHHhcCCCCC
Confidence            999999999865554444      788999999999999999999999999977531     3789999998876533 3


Q ss_pred             -CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        158 -GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       158 -~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                       ....|+++|+|+++|+++++.|++++||+||+++||+++|++.....+ ..+.+....|. +++.+|+|+|+.++||++
T Consensus       156 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~-~r~~~p~~va~~~~~L~s  233 (253)
T PRK05867        156 QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE-YQPLWEPKIPL-GRLGRPEELAGLYLYLAS  233 (253)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence             457899999999999999999999999999999999999998765432 23344455676 899999999999999997


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.++||+.+.+|||+++
T Consensus       234 ~~~~~~tG~~i~vdgG~~~  252 (253)
T PRK05867        234 EASSYMTGSDIVIDGGYTC  252 (253)
T ss_pred             cccCCcCCCeEEECCCccC
Confidence              47999999999999874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-45  Score=303.39  Aligned_cols=240  Identities=21%  Similarity=0.255  Sum_probs=200.2

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCC---chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPT---SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||+  +|||+++|++|+++|++|++++|+.   ++++++.++++ ...++++|++|+++++++++++.+.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhc
Confidence            678999999997  8999999999999999999998863   33444444443 35678999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||+.......  .+..+.+.++|++.+++|+.+++++++.+.|.|.+        .|+||++||..+..+.
T Consensus        87 g~iD~lv~nAG~~~~~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--------~g~Iv~iss~~~~~~~  156 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELT--GRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--------GGSILTLTYYGAEKVM  156 (272)
T ss_pred             CCCcEEEECCcccCccccc--cCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CceEEEEeccccccCC
Confidence            9999999999976421110  12233789999999999999999999999998853        4899999999998888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH--HHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |.+..|+++|+|+.+|+++++.|+.++||+||+|+||+++|++.....+  ...+......|. ++...|||+|+.++||
T Consensus       157 p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~~~~L  235 (272)
T PRK08159        157 PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL-RRTVTIEEVGDSALYL  235 (272)
T ss_pred             CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcc-cccCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987543211  111222234666 8899999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.++||++|.+|||+++
T Consensus       236 ~s~~~~~itG~~i~vdgG~~~  256 (272)
T PRK08159        236 LSDLSRGVTGEVHHVDSGYHV  256 (272)
T ss_pred             hCccccCccceEEEECCCcee
Confidence            97  46999999999999864

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-45  Score=300.23  Aligned_cols=242  Identities=18%  Similarity=0.223  Sum_probs=200.5

Q ss_pred             CCCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ||+||+++||||++  |||++++++|+++|++|++++|+. ++++..+++   ...+.+++||++|+++++++++++.+.
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence            47899999999986  999999999999999999999873 333333333   234678999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++|||||......... ....+.+.++|++.+++|+.+++.+++.+.|.+. +       .++|+++||..+..+
T Consensus        82 ~g~iD~linnAg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-------~g~Iv~iss~~~~~~  152 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDG-DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P-------GSALLTLSYLGAERA  152 (262)
T ss_pred             cCCCCEEEECCccCCccccCC-cchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C-------CcEEEEEecCCCCCC
Confidence            999999999999753322110 1122368899999999999999999999988653 2       479999999999888


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .+.+..|+++|+|+.+|+++++.|++++||+||+|+||+++|++.....  ++..+......|. +++..|+|+|+.++|
T Consensus       153 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedva~~~~~  231 (262)
T PRK07984        153 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI-RRTVTIEDVGNSAAF  231 (262)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC-cCCCCHHHHHHHHHH
Confidence            8889999999999999999999999999999999999999998754221  1223334455676 899999999999999


Q ss_pred             HhcC--CCcccceEEecCCccc
Q psy12833        234 IITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+++  .+++|+++.+|||+++
T Consensus       232 L~s~~~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        232 LCSDLSAGISGEVVHVDGGFSI  253 (262)
T ss_pred             HcCcccccccCcEEEECCCccc
Confidence            9974  7999999999999864

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-45  Score=301.32  Aligned_cols=242  Identities=18%  Similarity=0.230  Sum_probs=200.1

Q ss_pred             CCCcEEEEeCC--CChHHHHHHHHHHHcCCEEEEeeCC---CchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGG--ASGLGKATVERIVREGGRVVLCDLP---TSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGa--s~giG~a~a~~l~~~g~~v~~~~r~---~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||  ++|||++++++|+++|++|++++|.   .+.++++.++.+. ..+++||++|+++++++++++.+++
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHHh
Confidence            57899999996  6799999999999999999998654   3344444444433 3578999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||......... ....+.+.++|++.+++|+.++++++++++|+|.+        .++|+++||..+..+.
T Consensus        83 g~iD~lvnnAG~~~~~~~~~-~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--------~g~Ii~iss~~~~~~~  153 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAG-DFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--------DASLLTLSYLGAERVV  153 (260)
T ss_pred             CCCcEEEEccccCCcccccc-ccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--------CceEEEEeccccccCC
Confidence            99999999999754321100 01122688999999999999999999999999942        4799999999998888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +.+..|+++|+|+.+|+++++.|++++||+||+|+||+++|++.....  ++..+......|. ++..+|||+++.+.||
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedva~~~~~l  232 (260)
T PRK06997        154 PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL-RRNVTIEEVGNVAAFL  232 (260)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc-cccCCHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999998754321  2223334445676 8999999999999999


Q ss_pred             hc--CCCcccceEEecCCcccC
Q psy12833        235 IT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      ++  +.++||++|.+|||++++
T Consensus       233 ~s~~~~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        233 LSDLASGVTGEITHVDSGFNAV  254 (260)
T ss_pred             hCccccCcceeEEEEcCChhhc
Confidence            97  479999999999998764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-45  Score=298.63  Aligned_cols=245  Identities=22%  Similarity=0.309  Sum_probs=207.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||++|||++++++|+++|++|++++| +.+.++...+++    +.++.+++||++|+++++++++++.+.+
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999998876 444455444433    4578899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||...........+..+.+.+++++.+++|+.+++.+++.++|.|.+++      .++||++||..+..+.
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  159 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG------GGSIISLSSTGNLVYI  159 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC------CEEEEEEeccccccCC
Confidence            9999999999875322111112233368899999999999999999999999998765      6899999999998888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +.+..|+++|+|+++|+++++.|+.++||+|++|+||+++|++.....  ++..+.+....|. ++..+|+|+|+.+++|
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~r~~~p~~va~~~~~l  238 (260)
T PRK08416        160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL-NRMGQPEDLAGACLFL  238 (260)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999865432  3334444555666 8899999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.+++|+.+.+|||+++
T Consensus       239 ~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        239 CSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             cChhhhcccCcEEEEcCCeec
Confidence            97  36899999999999876

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-44  Score=295.49  Aligned_cols=239  Identities=29%  Similarity=0.472  Sum_probs=208.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.++++++.+++   +.++.+++||++|+++++++++++.+++++
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999988877776655   457889999999999999999999999999


Q ss_pred             CcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCC
Q psy12833         79 LDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQ  156 (254)
Q Consensus        79 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~  156 (254)
                      +|++|||||.... .++.+      .+.+++++.+++|+.+++.+++.++|.|.+++      .++||++||..+. .+.
T Consensus        84 id~li~~ag~~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~------~~~iv~~sS~~~~~~~~  151 (254)
T PRK07478         84 LDIAFNNAGTLGEMGPVAE------MSLEGWRETLATNLTSAFLGAKHQIPAMLARG------GGSLIFTSTFVGHTAGF  151 (254)
T ss_pred             CCEEEECCCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CceEEEEechHhhccCC
Confidence            9999999997542 23333      78899999999999999999999999998775      6899999999887 567


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +++..|++||+++++++++++.|+.++||+|++|+||+++|++.+..  .++..+......|. +++.+|+|+|+.++||
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l  230 (254)
T PRK07478        152 PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHAL-KRMAQPEEIAQAALFL  230 (254)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            88899999999999999999999999999999999999999976543  22333344444565 8889999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .+++|+.+.+|||+++
T Consensus       231 ~s~~~~~~~G~~~~~dgg~~~  251 (254)
T PRK07478        231 ASDAASFVTGTALLVDGGVSI  251 (254)
T ss_pred             cCchhcCCCCCeEEeCCchhc
Confidence            973  6899999999999876

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-44  Score=296.87  Aligned_cols=241  Identities=23%  Similarity=0.265  Sum_probs=200.7

Q ss_pred             CCCcEEEEeCC--CChHHHHHHHHHHHcCCEEEEeeCCC--chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGG--ASGLGKATVERIVREGGRVVLCDLPT--SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGa--s~giG~a~a~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|+++||||  ++|||++++++|+++|++|++++|+.  +.++++.++++.++.+++||++|+++++++++++.+.++
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999  89999999999999999999999864  345666666666788999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||+.....+.  .+..+.+.++|++.+++|+.+++++++.++|.|.+        .++|+++++. +..+.+
T Consensus        85 ~iD~li~nAG~~~~~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--------~g~Iv~is~~-~~~~~~  153 (256)
T PRK07889         85 GLDGVVHSIGFAPQSALG--GNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--------GGSIVGLDFD-ATVAWP  153 (256)
T ss_pred             CCcEEEEccccccccccC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--------CceEEEEeec-ccccCC
Confidence            999999999976321110  12233688999999999999999999999999963        4789999875 345567


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCC-CCCCHHHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQ-RLGHPDEFAQLVQSI  234 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l  234 (254)
                      .+..|++||+|+.+|+++++.|++++||+||+|+||+++|++.+...  ++..+.+.+..|. + ++.+|+|+|+.++||
T Consensus       154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~~~~~~p~evA~~v~~l  232 (256)
T PRK07889        154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL-GWDVKDPTPVARAVVAL  232 (256)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc-ccccCCHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999999865432  2223334445565 5 689999999999999


Q ss_pred             hcC--CCcccceEEecCCcccC
Q psy12833        235 ITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      +++  .+++|+++.+|||++++
T Consensus       233 ~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        233 LSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             hCcccccccceEEEEcCceecc
Confidence            974  68999999999998764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-44  Score=295.09  Aligned_cols=240  Identities=29%  Similarity=0.445  Sum_probs=207.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+ .+++..+++   +.++.++++|++|+++++++++++.+.++
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999764 345444444   55788999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++.+++++++.|.+++      .++||++||..+..+.+
T Consensus        86 ~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~  153 (254)
T PRK06114         86 ALTLAVNAAGIANANPAEE------MEEEQWQTVMDINLTGVFLSCQAEARAMLENG------GGSIVNIASMSGIIVNR  153 (254)
T ss_pred             CCCEEEECCCCCCCCChHh------CCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC------CcEEEEECchhhcCCCC
Confidence            9999999999865544444      78999999999999999999999999998765      68999999999887654


Q ss_pred             C--CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        158 G--QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       158 ~--~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +  ...|+++|+|+.+++++++.|+.++||+||+++||+++|++.... ..+..+.+.+..|. ++..+|||+|+.++||
T Consensus       154 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~~~~l  232 (254)
T PRK06114        154 GLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM-QRMAKVDEMVGPAVFL  232 (254)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            3  679999999999999999999999999999999999999986421 12223445566777 9999999999999999


Q ss_pred             hc--CCCcccceEEecCCcccC
Q psy12833        235 IT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      ++  +.+++|+++.+|||++.+
T Consensus       233 ~s~~~~~~tG~~i~~dgg~~~~  254 (254)
T PRK06114        233 LSDAASFCTGVDLLVDGGFVCW  254 (254)
T ss_pred             cCccccCcCCceEEECcCEecC
Confidence            97  479999999999999864

>KOG0725|consensus

Probab=100.00  E-value=2.1e-44  Score=294.59  Aligned_cols=239  Identities=34%  Similarity=0.543  Sum_probs=207.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++||++||||+++|||+++|.+|++.|++|++++|+.+.+++...++      +.++..+.||+++.++++++++...+.
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999988877765      346889999999999999999999999


Q ss_pred             -cCCCcEEEeCCccCCCc-cccccCCCCcCCHHHHHHHHHHHhH-HHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         76 -FGKLDVNVNCAGISCAF-KIFNYNKGTVHSLDDFKRILLVNTV-GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        76 -~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                       +|++|++|||||..... +..+      .++++|++.+++|+. +.+.+.+.+.+++.+++      .+.|+++||..+
T Consensus        86 ~~GkidiLvnnag~~~~~~~~~~------~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~------gg~I~~~ss~~~  153 (270)
T KOG0725|consen   86 FFGKIDILVNNAGALGLTGSILD------LSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK------GGSIVNISSVAG  153 (270)
T ss_pred             hCCCCCEEEEcCCcCCCCCChhh------CCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC------CceEEEEecccc
Confidence             69999999999987655 3444      899999999999999 57777788888888876      789999999999


Q ss_pred             ccCCCCC-ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-h----HHHHHH--HHhcCCCCCCCCCH
Q psy12833        153 YEGQSGQ-VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-N----EKVRNF--LARSIPAPQRLGHP  224 (254)
Q Consensus       153 ~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~----~~~~~~--~~~~~~~~~~~~~~  224 (254)
                      ..+.++. ..|+++|+|+++|+|++|.|+.++|||||+|.||.+.|++.... .    ++..+.  .....|. ++...|
T Consensus       154 ~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~-gr~g~~  232 (270)
T KOG0725|consen  154 VGPGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPL-GRVGTP  232 (270)
T ss_pred             ccCCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccccc-CCccCH
Confidence            9886555 79999999999999999999999999999999999999982211 1    222222  2335567 999999


Q ss_pred             HHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        225 DEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       225 ~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +|+++.+.||+++  .|++||.|.+|||+++
T Consensus       233 ~eva~~~~fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  233 EEVAEAAAFLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             HHHHHhHHhhcCcccccccCCEEEEeCCEEe
Confidence            9999999999964  4999999999999986

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=2.5e-44  Score=299.00  Aligned_cols=236  Identities=19%  Similarity=0.242  Sum_probs=198.4

Q ss_pred             CCCcEEEEeCC--CChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC----------------CCceEEecCC--CC
Q psy12833          2 LKGVVGLVTGG--ASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG----------------PDVKFAPVDV--TS   61 (254)
Q Consensus         2 l~~~~~lItGa--s~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dl--s~   61 (254)
                      |+||++|||||  |+|||+++|+.|+++|++|++ +|+.++++++.+++.                .....+++|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            67999999999  899999999999999999998 788777776664431                1146788998  43


Q ss_pred             ------------------HHHHHHHHHHHHHHcCCCcEEEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHH
Q psy12833         62 ------------------EEDVQKAVLLCKDSFGKLDVNVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFN  121 (254)
Q Consensus        62 ------------------~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  121 (254)
                                        +++++++++++.+.+|++|++|||||....  .++.+      .+.++|++.+++|+.+++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~------~~~e~~~~~~~vN~~~~~~  159 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLE------TSRKGYLAAISASSYSFVS  159 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhh------CCHHHHHHHHHHHhHHHHH
Confidence                              458999999999999999999999986421  33333      7999999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC-ccchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccc
Q psy12833        122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPL  199 (254)
Q Consensus       122 l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~  199 (254)
                      ++|.++|.|.+        .|+||++||..+..+.|++ ..|+++|+|+.+|+++|+.|+++ +||+||+|+||+++|++
T Consensus       160 l~~~~~p~m~~--------~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~  231 (303)
T PLN02730        160 LLQHFGPIMNP--------GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRA  231 (303)
T ss_pred             HHHHHHHHHhc--------CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCch
Confidence            99999999964        3899999999998888865 47999999999999999999986 79999999999999998


Q ss_pred             cccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        200 LSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       200 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .+...  ++..+......|. +++..|+|+++.++||++  +.+++|+++.+|||+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~pl-~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        232 AKAIGFIDDMIEYSYANAPL-QKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             hhcccccHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence            75421  2323333344565 788999999999999997  46899999999999875

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=5.7e-45  Score=296.00  Aligned_cols=225  Identities=35%  Similarity=0.566  Sum_probs=201.6

Q ss_pred             CCC--ChHHHHHHHHHHHcCCEEEEeeCCCchhH----HHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCCcEEE
Q psy12833         11 GGA--SGLGKATVERIVREGGRVVLCDLPTSEGE----SVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKLDVNV   83 (254)
Q Consensus        11 Gas--~giG~a~a~~l~~~g~~v~~~~r~~~~~~----~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id~li   83 (254)
                      |++  +|||+++|++|+++|++|++++|+.++++    ++.++.+.  .+++||++|+++++++++++.+.+ |++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~--~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA--EVIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS--EEEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC--ceEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            566  99999999999999999999999998743    44444443  369999999999999999999999 9999999


Q ss_pred             eCCccCCC----ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         84 NCAGISCA----FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        84 ~~ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      ||+|....    .++.+      .+.++|.+.+++|+.+++.+++.+.|.|.+        .++||++||..+..+.+++
T Consensus        79 ~~a~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~gsii~iss~~~~~~~~~~  144 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLD------LSEEDWDKTFDINVFSPFLLAQAALPLMKK--------GGSIINISSIAAQRPMPGY  144 (241)
T ss_dssp             EEEESCTGGGTSSSGGG------SHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--------EEEEEEEEEGGGTSBSTTT
T ss_pred             ecccccccccCCCChHh------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------CCCcccccchhhcccCccc
Confidence            99997665    33333      789999999999999999999999998877        4899999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ..|+++|+|+++|+|++|.|+++ +|||||+|+||+++|++.+...  ++..+...+..|. +|..+|+|||+.++||++
T Consensus       145 ~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl-~r~~~~~evA~~v~fL~s  223 (241)
T PF13561_consen  145 SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL-GRLGTPEEVANAVLFLAS  223 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT-SSHBEHHHHHHHHHHHHS
T ss_pred             hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc-CCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999 9999999999999999876553  6677788888998 999999999999999998


Q ss_pred             C--CCcccceEEecCCcc
Q psy12833        237 N--PLINGEVIRIDGALR  252 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~  252 (254)
                      +  .++|||+|.+|||+|
T Consensus       224 ~~a~~itG~~i~vDGG~s  241 (241)
T PF13561_consen  224 DAASYITGQVIPVDGGFS  241 (241)
T ss_dssp             GGGTTGTSEEEEESTTGG
T ss_pred             ccccCccCCeEEECCCcC
Confidence            4  699999999999986

...

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-44  Score=292.40  Aligned_cols=239  Identities=28%  Similarity=0.465  Sum_probs=212.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+++
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999988877776665   346788999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++.+      .+.++|++.+++|+.+++.+++.+.+.+.+++      .++||++||..+..+.++
T Consensus        87 id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~  154 (254)
T PRK08085         87 IDVLINNAGIQRRHPFTE------FPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ------AGKIINICSMQSELGRDT  154 (254)
T ss_pred             CCEEEECCCcCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEEccchhccCCCC
Confidence            999999999765444444      78999999999999999999999999997765      689999999999888888


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ...|+++|+++++++++++.|++++||++|+|+||+++|++....  .++..+......|. +++.+|||+|+.+.+|++
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~va~~~~~l~~  233 (254)
T PRK08085        155 ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA-ARWGDPQELIGAAVFLSS  233 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999986543  23334455556777 899999999999999997


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.++||+++.+|||+++
T Consensus       234 ~~~~~i~G~~i~~dgg~~~  252 (254)
T PRK08085        234 KASDFVNGHLLFVDGGMLV  252 (254)
T ss_pred             ccccCCcCCEEEECCCeee
Confidence              57999999999999875

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-44  Score=294.03  Aligned_cols=237  Identities=32%  Similarity=0.460  Sum_probs=208.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.++++++.++++.++.+++||++|+++++++++++.+.++++|+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            67899999999999999999999999999999999988888888777778899999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||......+ +      .+.++|++.+++|+.+++.+++.+.|.|. ++      .++||++||..+..+.+++..
T Consensus        84 lv~~ag~~~~~~~-~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~------~g~ii~isS~~~~~~~~~~~~  149 (261)
T PRK08265         84 LVNLACTYLDDGL-A------SSRADWLAALDVNLVSAAMLAQAAHPHLA-RG------GGAIVNFTSISAKFAQTGRWL  149 (261)
T ss_pred             EEECCCCCCCCcC-c------CCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC------CcEEEEECchhhccCCCCCch
Confidence            9999997543321 2      58899999999999999999999999997 43      589999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH---HHHHHHH-hcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE---KVRNFLA-RSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      |+++|+++.+++++++.|+.++||++|+|+||+++|++.+...+   +..+... ...|. +++.+|+|+|+.+.||+++
T Consensus       150 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~~~~l~s~  228 (261)
T PRK08265        150 YPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLL-GRVGDPEEVAQVVAFLCSD  228 (261)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCC-CCccCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999999998654321   1112222 23455 8899999999999999974


Q ss_pred             --CCcccceEEecCCccc
Q psy12833        238 --PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~~  253 (254)
                        .+++|+.|.+|||+++
T Consensus       229 ~~~~~tG~~i~vdgg~~~  246 (261)
T PRK08265        229 AASFVTGADYAVDGGYSA  246 (261)
T ss_pred             cccCccCcEEEECCCeec
Confidence              6999999999999875

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-44  Score=294.35  Aligned_cols=239  Identities=29%  Similarity=0.418  Sum_probs=207.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++||+++||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+.+
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999988877766554     2367889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.+++.+++.++|.|.++.      .++|+++||..+..+.
T Consensus        86 g~id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  153 (265)
T PRK07062         86 GGVDMLVNNAGQGRVSTFAD------TTDDAWRDELELKYFSVINPTRAFLPLLRASA------AASIVCVNSLLALQPE  153 (265)
T ss_pred             CCCCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC------CcEEEEeccccccCCC
Confidence            99999999999865544444      78899999999999999999999999998765      6899999999999998


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH----------HHHHHH--HhcCCCCCCCCCH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE----------KVRNFL--ARSIPAPQRLGHP  224 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~----------~~~~~~--~~~~~~~~~~~~~  224 (254)
                      +....|+++|+|+.+|+++++.|+.++||+|++++||+++|+++.....          +..+..  ....|. +++..|
T Consensus       154 ~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p  232 (265)
T PRK07062        154 PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL-GRLGRP  232 (265)
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc-CCCCCH
Confidence            8899999999999999999999999999999999999999997643111          111111  234566 889999


Q ss_pred             HHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        225 DEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       225 ~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +|+|+.+.+|++  ..++||+++.+|||++.
T Consensus       233 ~~va~~~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        233 DEAARALFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHHHHHHHHhCchhcccccceEEEcCceEe
Confidence            999999999997  46999999999999753

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-44  Score=296.47  Aligned_cols=241  Identities=29%  Similarity=0.394  Sum_probs=203.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC---------chhHHHHHHh---CCCceEEecCCCCHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT---------SEGESVAKEL---GPDVKFAPVDVTSEEDVQKA   68 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~   68 (254)
                      +++||++|||||++|||++++++|+++|++|++++|+.         +.+++..+++   +.++.++++|++|++++.++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            37899999999999999999999999999999998876         5566666555   45688899999999999999


Q ss_pred             HHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEe
Q psy12833         69 VLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA  148 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vs  148 (254)
                      ++++.+.++++|++|||||+....++.+      .+.++|++.+++|+.+++++++.++|.|.++........++||++|
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~is  156 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRDRMIAN------MSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTS  156 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeC
Confidence            9999999999999999999865444444      7899999999999999999999999999765321111247999999


Q ss_pred             ccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCC--CCCCHHH
Q psy12833        149 SIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ--RLGHPDE  226 (254)
Q Consensus       149 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  226 (254)
                      |.++..+.+++..|+++|+|+++|+++++.|++++||+||+|+|| ++|++.....+    ......+. +  +..+|||
T Consensus       157 S~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~----~~~~~~~~-~~~~~~~ped  230 (286)
T PRK07791        157 SGAGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA----EMMAKPEE-GEFDAMAPEN  230 (286)
T ss_pred             chhhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH----HHHhcCcc-cccCCCCHHH
Confidence            999999999999999999999999999999999999999999999 78887543221    12222232 3  4679999


Q ss_pred             HHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        227 FAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       227 va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +|+.++||+++  .+++|+++.+|||+.+
T Consensus       231 va~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        231 VSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence            99999999974  7899999999999864

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.7e-44  Score=294.32  Aligned_cols=237  Identities=32%  Similarity=0.529  Sum_probs=204.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+ +.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            679999999999999999999999999999999999 7666666555   456889999999999999999999999999


Q ss_pred             CcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||.... .++.+      .+.+.|++.+++|+.+++.+++.++|.|.++       .++||++||..+..+.+
T Consensus        83 id~li~~Ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  149 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHE------YPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ-------GGSIINTSSFSGQAADL  149 (272)
T ss_pred             cCEEEECCCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------CCEEEEeCchhhcCCCC
Confidence            9999999997643 23333      6889999999999999999999999999865       47999999999999988


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH----HHHHH----HHhcCCCCCCCCCHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE----KVRNF----LARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~va~  229 (254)
                      +...|+++|+|+++|+++++.|++++||+||+++||+++|++.....+    .....    .....|. +++.+|+|+|+
T Consensus       150 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~  228 (272)
T PRK08589        150 YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPL-GRLGKPEEVAK  228 (272)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCC-CCCcCHHHHHH
Confidence            899999999999999999999999999999999999999998754321    11111    1223455 78899999999


Q ss_pred             HHHHHhc--CCCcccceEEecCCccc
Q psy12833        230 LVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       230 ~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .+++|++  .++++|+++.+|||...
T Consensus       229 ~~~~l~s~~~~~~~G~~i~vdgg~~~  254 (272)
T PRK08589        229 LVVFLASDDSSFITGETIRIDGGVMA  254 (272)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCccc
Confidence            9999997  47999999999999754

>KOG1199|consensus

Probab=100.00  E-value=8.7e-46  Score=271.58  Aligned_cols=253  Identities=65%  Similarity=1.009  Sum_probs=241.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |.+|-++||||+.+|+|++.+++|+++|+.|++.+-.+++.++...+++.++.|.+.|++.+++++.++...+.+||++|
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      .++||||+......++.++..-.+.+++++.+++|+.++|+.++...-.|-.+++.+....|.||+..|.+++.+..++.
T Consensus        86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqa  165 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQA  165 (260)
T ss_pred             eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchh
Confidence            99999999776666666665567999999999999999999999999999999988888899999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCc
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI  240 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  240 (254)
                      +|++||.++.+++.-+++.++..|||++.+.||.++||+...+.+....+..+.+|.|.|++.|.|.++.+..+++++++
T Consensus       166 aysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvqaiienp~l  245 (260)
T KOG1199|consen  166 AYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIENPYL  245 (260)
T ss_pred             hhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceEEecCCccc
Q psy12833        241 NGEVIRIDGALRM  253 (254)
Q Consensus       241 ~G~~i~~~gG~~~  253 (254)
                      ||++|.+||...|
T Consensus       246 ngevir~dgalrm  258 (260)
T KOG1199|consen  246 NGEVIRFDGALRM  258 (260)
T ss_pred             CCeEEEecceecC
Confidence            9999999998876

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-43  Score=293.18  Aligned_cols=246  Identities=29%  Similarity=0.394  Sum_probs=211.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.+++||++|++++.++++++.+.+++
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999987777766654   456889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccc---------cccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         79 LDVNVNCAGISCAFKI---------FNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        79 id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      +|++|||||.......         .......+.+.++|++.+++|+.+++.+++.+++.|.+++      .++||++||
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~ii~isS  161 (278)
T PRK08277         88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK------GGNIINISS  161 (278)
T ss_pred             CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC------CcEEEEEcc
Confidence            9999999996543211         1112334478899999999999999999999999998765      689999999


Q ss_pred             cccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-------HHHHHHHHhcCCCCCCCC
Q psy12833        150 IAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-------EKVRNFLARSIPAPQRLG  222 (254)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-------~~~~~~~~~~~~~~~~~~  222 (254)
                      ..+..+.++...|+++|+|+++++++++.|+.++||+||+++||+++|++.+...       .+..+......|. +++.
T Consensus       162 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~  240 (278)
T PRK08277        162 MNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPM-GRFG  240 (278)
T ss_pred             chhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCc-cCCC
Confidence            9999999999999999999999999999999999999999999999999754321       1223344455666 8999


Q ss_pred             CHHHHHHHHHHHhcC---CCcccceEEecCCcccC
Q psy12833        223 HPDEFAQLVQSIITN---PLINGEVIRIDGALRMI  254 (254)
Q Consensus       223 ~~~~va~~~~~l~~~---~~~~G~~i~~~gG~~~~  254 (254)
                      +|+|+|++++||+++   .++||++|.+|||++.+
T Consensus       241 ~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~  275 (278)
T PRK08277        241 KPEELLGTLLWLADEKASSFVTGVVLPVDGGFSAY  275 (278)
T ss_pred             CHHHHHHHHHHHcCccccCCcCCCEEEECCCeecc
Confidence            999999999999975   58999999999998864

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-44  Score=294.26  Aligned_cols=238  Identities=33%  Similarity=0.433  Sum_probs=206.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.++++.++++.++.++++|++|+++++++++++.+.++++|
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            36799999999999999999999999999999999998888888777777789999999999999999999999999999


Q ss_pred             EEEeCCccCCC-ccccccCCCCcCCHH----HHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         81 VNVNCAGISCA-FKIFNYNKGTVHSLD----DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        81 ~li~~ag~~~~-~~~~~~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++|||||.... .++.+      .+.+    .|++.+++|+.+++.+++.++|.|.++       .++||+++|..+..+
T Consensus        83 ~li~~ag~~~~~~~~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~  149 (263)
T PRK06200         83 CFVGNAGIWDYNTSLVD------IPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-------GGSMIFTLSNSSFYP  149 (263)
T ss_pred             EEEECCCCcccCCCccc------CChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-------CCEEEEECChhhcCC
Confidence            99999997542 22222      3444    388999999999999999999998764       489999999999998


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-----------hHHHHHHHHhcCCCCCCCCCH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHP  224 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  224 (254)
                      .++...|+++|+|+++|+++++.|+++. |+||+|+||+++|++....           .++..+...+..|. ++..+|
T Consensus       150 ~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~  227 (263)
T PRK06200        150 GGGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL-QFAPQP  227 (263)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCC-CCCCCH
Confidence            8888999999999999999999999884 9999999999999975321           11233445556777 999999


Q ss_pred             HHHHHHHHHHhc---CCCcccceEEecCCccc
Q psy12833        225 DEFAQLVQSIIT---NPLINGEVIRIDGALRM  253 (254)
Q Consensus       225 ~~va~~~~~l~~---~~~~~G~~i~~~gG~~~  253 (254)
                      +|+|+.+.||++   +.+++|+.|.+|||+++
T Consensus       228 ~eva~~~~fl~s~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        228 EDHTGPYVLLASRRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             HHHhhhhhheecccccCcccceEEEEcCceee
Confidence            999999999997   56899999999999875

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.9e-44  Score=287.85  Aligned_cols=220  Identities=25%  Similarity=0.369  Sum_probs=198.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++++++++|||||+|||+++|++|+++|++|++++|++++++++++++    +..+.++++|+++++++.++.+++.+..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999999999887    3457899999999999999999999998


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +.+|++|||||.....++.+      .++++.++++++|+.+...++++++|.|.++.      .|.||+++|.+++.|.
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~------~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~------~G~IiNI~S~ag~~p~  150 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLE------LSLDEEEEMIQLNILALTRLTKAVLPGMVERG------AGHIINIGSAAGLIPT  150 (265)
T ss_pred             CcccEEEECCCcCCccchhh------CChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CceEEEEechhhcCCC
Confidence            99999999999988887777      89999999999999999999999999999987      7999999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      |..+.|++||+++.+|+.+|+.|+.+.||+|..|+||++.|++++. ....   .....+. ....+|+++|+..+..+.
T Consensus       151 p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-~~~~---~~~~~~~-~~~~~~~~va~~~~~~l~  225 (265)
T COG0300         151 PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-KGSD---VYLLSPG-ELVLSPEDVAEAALKALE  225 (265)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-cccc---cccccch-hhccCHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999861 1110   0011122 667899999999999995


Q ss_pred             C
Q psy12833        237 N  237 (254)
Q Consensus       237 ~  237 (254)
                      .
T Consensus       226 ~  226 (265)
T COG0300         226 K  226 (265)
T ss_pred             c
Confidence            3

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-43  Score=288.49  Aligned_cols=240  Identities=31%  Similarity=0.495  Sum_probs=212.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.+++.++++++.+.+++
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999988776665544   567899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCcc-ccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISCAFK-IFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||+|...... +.+      .+.+++++.+++|+.+++.+++.++|.+.+++      .++++++||..+..+.+
T Consensus        85 id~li~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~ii~~sS~~~~~~~~  152 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAE------GSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG------GGAIVNTASVAGLGAAP  152 (253)
T ss_pred             CCEEEECCCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEECchhhccCCC
Confidence            999999999754322 333      68899999999999999999999999998765      58999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ++..|+++|+++++|+++++.|+.++||+|++++||.++|++.+..   .+...+.+....|. ++..+|+|+++.++||
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~ia~~~~~l  231 (253)
T PRK06172        153 KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV-GRIGKVEEVASAVLYL  231 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC-CCccCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987654   23444555556666 8899999999999999


Q ss_pred             hc--CCCcccceEEecCCcccC
Q psy12833        235 IT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      ++  +.+++|+.|.+|||++++
T Consensus       232 ~~~~~~~~~G~~i~~dgg~~~~  253 (253)
T PRK06172        232 CSDGASFTTGHALMVDGGATAQ  253 (253)
T ss_pred             hCccccCcCCcEEEECCCccCC
Confidence            97  479999999999999874

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-43  Score=288.91  Aligned_cols=238  Identities=27%  Similarity=0.395  Sum_probs=200.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee-CCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHH-
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDS-   75 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~-   75 (254)
                      |+++|+++||||++|||++++++|+++|++|+++. |+.+..++...++   +.++..+++|++|.+++.++++++.+. 
T Consensus         1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999998875 5555555555444   456788999999999999999988763 


Q ss_pred             ---cC--CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         76 ---FG--KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        76 ---~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                         ++  ++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.+        .++||++||.
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~------~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--------~g~iv~isS~  146 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEE------TTEQFFDRMVSVNAKAPFFIIQQALSRLRD--------NSRIINISSA  146 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCccc------CCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--------CCeEEEECCc
Confidence               33  8999999999754433333      788999999999999999999999999864        4799999999


Q ss_pred             ccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        151 AAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      .+..+.++...|++||+|+++++++++.|+.++||+||+|+||+++|++.....  +...+......|. +++.+|+|+|
T Consensus       147 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva  225 (252)
T PRK12747        147 ATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAF-NRLGEVEDIA  225 (252)
T ss_pred             ccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcc-cCCCCHHHHH
Confidence            999999999999999999999999999999999999999999999999865421  1212222222355 8899999999


Q ss_pred             HHHHHHhc--CCCcccceEEecCCccc
Q psy12833        229 QLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       229 ~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +.+.||++  +.+++|+.+.+|||+.+
T Consensus       226 ~~~~~l~s~~~~~~~G~~i~vdgg~~~  252 (252)
T PRK12747        226 DTAAFLASPDSRWVTGQLIDVSGGSCL  252 (252)
T ss_pred             HHHHHHcCccccCcCCcEEEecCCccC
Confidence            99999997  46899999999999875

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-43  Score=288.48  Aligned_cols=238  Identities=29%  Similarity=0.498  Sum_probs=207.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+ +..++..++   .+.++.+++||++|.++++++++++.+.+++
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999998 444444433   3567889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++.+      .+.++|++.+++|+.+++.+++.++|.|.++.      .++|+++||..+..+.+.
T Consensus        92 id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  159 (258)
T PRK06935         92 IDILVNNAGTIRRAPLLE------YKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG------SGKIINIASMLSFQGGKF  159 (258)
T ss_pred             CCEEEECCCCCCCCCccc------CCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC------CeEEEEECCHHhccCCCC
Confidence            999999999865544444      68899999999999999999999999998765      689999999999988888


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      +..|+++|++++++++++++|+.++||+||.++||+++|++.....  +...+......|. +++.+|+|+|+.+.||++
T Consensus       160 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s  238 (258)
T PRK06935        160 VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPA-GRWGEPDDLMGAAVFLAS  238 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999999764322  2223344456676 899999999999999997


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.+++|+++.+|||+++
T Consensus       239 ~~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        239 RASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             hhhcCCCCCEEEECCCeec
Confidence              46899999999999875

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=2.8e-43  Score=288.83  Aligned_cols=230  Identities=34%  Similarity=0.559  Sum_probs=200.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..        .++.+++||++|+++++++++++.++++++|+
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999999986542        25788999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++.+++.++|.|.+.+      .++||++||..+..+.+++..
T Consensus        76 li~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  143 (258)
T PRK06398         76 LVNNAGIESYGAIHA------VEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD------KGVIINIASVQSFAVTRNAAA  143 (258)
T ss_pred             EEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CeEEEEeCcchhccCCCCCch
Confidence            999999865444444      78999999999999999999999999998765      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-------HH-H---HHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-------EK-V---RNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-------~~-~---~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      |+++|+|+++++++++.|+.+. |+||+++||+++|++.....       ++ .   .+.+....|. ++..+|+|+|+.
T Consensus       144 Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~eva~~  221 (258)
T PRK06398        144 YVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPM-KRVGKPEEVAYV  221 (258)
T ss_pred             hhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCc-CCCcCHHHHHHH
Confidence            9999999999999999999876 99999999999999864321       11 1   1222344566 889999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++||+++  .+++|+++.+|||++.
T Consensus       222 ~~~l~s~~~~~~~G~~i~~dgg~~~  246 (258)
T PRK06398        222 VAFLASDLASFITGECVTVDGGLRA  246 (258)
T ss_pred             HHHHcCcccCCCCCcEEEECCcccc
Confidence            9999973  6899999999999864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-43  Score=289.19  Aligned_cols=238  Identities=24%  Similarity=0.318  Sum_probs=203.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++|||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++++|++|+++++++++++.+.++++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999999999999999999888777766652  3688999999999999999999999999999999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      ||||.....+    .+..+.+.++|.+.+.+|+.+++.+++.++|.|.++.     ..++||++||..+..+.++...|+
T Consensus        82 ~naG~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~y~  152 (259)
T PRK08340         82 WNAGNVRCEP----CMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK-----MKGVLVYLSSVSVKEPMPPLVLAD  152 (259)
T ss_pred             ECCCCCCCCc----cccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC-----CCCEEEEEeCcccCCCCCCchHHH
Confidence            9999753211    1122268889999999999999999999999886432     158999999999999989999999


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HH-HHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EK-VRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      ++|+|+.+|+++++.|+.++||+|++|+||+++|++.+...           ++ ..+......|. +|+.+|+|+|+.+
T Consensus       153 ~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~~  231 (259)
T PRK08340        153 VTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPL-KRTGRWEELGSLI  231 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCc-cCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999864211           11 12334455676 8999999999999


Q ss_pred             HHHhc--CCCcccceEEecCCccc
Q psy12833        232 QSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       232 ~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .||++  +.++||+++.+|||+++
T Consensus       232 ~fL~s~~~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        232 AFLLSENAEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             HHHcCcccccccCceEeecCCcCC
Confidence            99997  46999999999999764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=4.1e-43  Score=287.06  Aligned_cols=240  Identities=28%  Similarity=0.389  Sum_probs=204.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++||++|||||++|||++++++|+++|++|++++++... ..+...+.+.++.++++|++|.++++++++++.++++++|
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999988775421 1112223356788999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....++.+      .+.++|++.+++|+.+++.+++++.|.|.++..     .++||++||..+..+.+...
T Consensus        88 ~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~  156 (253)
T PRK08993         88 ILVNNAGLIRREDAIE------FSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN-----GGKIINIASMLSFQGGIRVP  156 (253)
T ss_pred             EEEECCCCCCCCCccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-----CeEEEEECchhhccCCCCCc
Confidence            9999999865444444      788999999999999999999999999977531     48999999999999888889


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      .|+++|+|+++++++++.|+.++||+|++++||+++|++.....  +...+.+.+..|. +++..|+|+|..++||+++ 
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        157 SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPA-GRWGLPSDLMGPVVFLASSA  235 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999999865432  2222344556776 8999999999999999974 


Q ss_pred             -CCcccceEEecCCccc
Q psy12833        238 -PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 -~~~~G~~i~~~gG~~~  253 (254)
                       .+++|+++.+|||+.+
T Consensus       236 ~~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        236 SDYINGYTIAVDGGWLA  252 (253)
T ss_pred             ccCccCcEEEECCCEec
Confidence             6999999999999764

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-42  Score=290.04  Aligned_cols=237  Identities=29%  Similarity=0.440  Sum_probs=203.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc--hhHHHHH---HhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS--EGESVAK---ELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~--~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+..  ..+++.+   +.+.++.++.||++|++++.++++++.+.+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999887542  3344433   235568889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||||.... .++.+      .+.++|++.+++|+.+++++++++.|.|.+        .++||++||..+..+
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--------~g~iv~iSS~~~~~~  192 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIAD------LTSEQFQKTFAINVFALFWLTQEAIPLLPK--------GASIITTSSIQAYQP  192 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--------CCEEEEECCchhccC
Confidence            999999999996432 22333      789999999999999999999999999864        479999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--chHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .+....|+++|+|+++++++++.|++++||+||+++||+++|++...  ..++..+.+....|. ++...|+|+|+.++|
T Consensus       193 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~r~~~pedva~~~~f  271 (294)
T PRK07985        193 SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM-KRAGQPAELAPVYVY  271 (294)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC-CCCCCHHHHHHHHHh
Confidence            88899999999999999999999999999999999999999997532  123333445556676 889999999999999


Q ss_pred             Hhc--CCCcccceEEecCCccc
Q psy12833        234 IIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |++  +.+++|++|.+|||+.+
T Consensus       272 L~s~~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        272 LASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             hhChhcCCccccEEeeCCCeeC
Confidence            997  47999999999999875

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-42  Score=284.32  Aligned_cols=239  Identities=31%  Similarity=0.483  Sum_probs=211.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++|||||+++||++++++|+++|++|++++|++++.++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999988777666555   345889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++.+      .+.+++++.+++|+.+++++++.+.+.|.++.      .++||++||..+..+.++
T Consensus        88 ~d~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~iss~~~~~~~~~  155 (255)
T PRK07523         88 IDILVNNAGMQFRTPLED------FPADAFERLLRTNISSVFYVGQAVARHMIARG------AGKIINIASVQSALARPG  155 (255)
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC------CeEEEEEccchhccCCCC
Confidence            999999999875555444      78999999999999999999999999998765      689999999999888899


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      +..|+++|+++++++++++.|++++||+|++++||+++|++....  .+...+.+....|. +++..|+|+|+.+++|++
T Consensus       156 ~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  234 (255)
T PRK07523        156 IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPA-GRWGKVEELVGACVFLAS  234 (255)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999986533  13334455556676 899999999999999997


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.+++|++|.+|||+++
T Consensus       235 ~~~~~~~G~~i~~~gg~~~  253 (255)
T PRK07523        235 DASSFVNGHVLYVDGGITA  253 (255)
T ss_pred             chhcCccCcEEEECCCeec
Confidence              47899999999999874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-42  Score=282.82  Aligned_cols=235  Identities=29%  Similarity=0.468  Sum_probs=199.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh-HHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.. +++.+   .++.++++|++|+++++++++++.+.++++|
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE---KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD   81 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh---CCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            6789999999999999999999999999999887755433 23322   2578999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-CCCCC
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-GQSGQ  159 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-~~~~~  159 (254)
                      ++|||+|.....++.+      .+.++|++.+++|+.+++++++.++|.|.+++      .++||++||..+.. +.++.
T Consensus        82 ~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~------~g~iv~isS~~~~~~~~~~~  149 (255)
T PRK06463         82 VLVNNAGIMYLMPFEE------FDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK------NGAIVNIASNAGIGTAAEGT  149 (255)
T ss_pred             EEEECCCcCCCCChhh------CCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC------CcEEEEEcCHHhCCCCCCCc
Confidence            9999999865444444      68899999999999999999999999998665      68999999998875 44677


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ..|+++|+|+++|+++++.|+.++||+|++++||+++|++.....     +...+.+....|. ++..+|+|+|+.+++|
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l  228 (255)
T PRK06463        150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVL-KTTGKPEDIANIVLFL  228 (255)
T ss_pred             cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCc-CCCcCHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999864321     1233344455666 8889999999999999


Q ss_pred             hcC--CCcccceEEecCCcc
Q psy12833        235 ITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~  252 (254)
                      +++  .+++|+.+.+|||..
T Consensus       229 ~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        229 ASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             cChhhcCCCCCEEEECCCee
Confidence            973  689999999999974

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.2e-42  Score=282.21  Aligned_cols=238  Identities=30%  Similarity=0.455  Sum_probs=206.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++...++   +.++.++++|++|+++++++++++.+.++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999988777766654   45788999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|.....++.+      .+.+++++.+++|+.+++.+++.+.+.|.+...     .++|+++||..+..+.++..
T Consensus        82 ~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~  150 (256)
T PRK08643         82 VVVNNAGVAPTTPIET------ITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH-----GGKIINATSQAGVVGNPELA  150 (256)
T ss_pred             EEEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CCEEEEECccccccCCCCCc
Confidence            9999999765444433      688999999999999999999999999976531     47999999999999988899


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH----------H-HHHHHhcCCCCCCCCCHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK----------V-RNFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~va~  229 (254)
                      .|+++|++++.+++.++.|+.++||+|++++||+++|++.....+.          + ...+.+..+. +++.+|+|+|+
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~  229 (256)
T PRK08643        151 VYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITL-GRLSEPEDVAN  229 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCC-CCCcCHHHHHH
Confidence            9999999999999999999999999999999999999986543211          1 1223345566 88999999999


Q ss_pred             HHHHHhc--CCCcccceEEecCCccc
Q psy12833        230 LVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       230 ~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .+.||++  ..++||+++.+|||+++
T Consensus       230 ~~~~L~~~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        230 CVSFLAGPDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             HHHHHhCccccCccCcEEEeCCCeec
Confidence            9999997  46899999999999875

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-42  Score=281.09  Aligned_cols=238  Identities=28%  Similarity=0.442  Sum_probs=208.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++++|++|.++++++++++.+.+++
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999888777766654   456788999999999999999999999999


Q ss_pred             CcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||+|.... .++.+      .+.+++++.+++|+.+++.++++++|++.++.      .++|+++||..+..+.+
T Consensus        86 id~li~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~  153 (252)
T PRK07035         86 LDILVNNAAANPYFGHILD------TDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG------GGSIVNVASVNGVSPGD  153 (252)
T ss_pred             CCEEEECCCcCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC------CcEEEEECchhhcCCCC
Confidence            9999999986432 22223      68899999999999999999999999998765      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ++..|++||+++++|+++++.|+.++||+|++++||.++|++....  .++..+...+..|. ++..+|+|+|+.+.+|+
T Consensus       154 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  232 (252)
T PRK07035        154 FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL-RRHAEPSEMAGAVLYLA  232 (252)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCC-CCcCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999986543  23344455556666 88999999999999999


Q ss_pred             cC--CCcccceEEecCCcc
Q psy12833        236 TN--PLINGEVIRIDGALR  252 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~  252 (254)
                      ++  .+++|+++.+|||++
T Consensus       233 ~~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        233 SDASSYTTGECLNVDGGYL  251 (252)
T ss_pred             CccccCccCCEEEeCCCcC
Confidence            74  689999999999975

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-42  Score=281.60  Aligned_cols=240  Identities=32%  Similarity=0.516  Sum_probs=211.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..++.++++|++|+++++++++++.+.++++|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56899999999999999999999999999999999998888887777777899999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||+|.....++.+      .+.++++..+++|+.+++.+++++.+.|.++..     .++||++||..+..+.++...
T Consensus        84 li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~  152 (257)
T PRK07067         84 LFNNAALFDMAPILD------ISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR-----GGKIINMASQAGRRGEALVSH  152 (257)
T ss_pred             EEECCCcCCCCCccc------CCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC-----CcEEEEeCCHHhCCCCCCCch
Confidence            999999765444444      688999999999999999999999999876531     479999999998888889999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      |+++|++++.++++++.|+.++||++++++||+++|++++...           .+..+.+.+..|. +++.+|+|+|+.
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  231 (257)
T PRK07067        153 YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPL-GRMGVPDDLTGM  231 (257)
T ss_pred             hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCC-CCccCHHHHHHH
Confidence            9999999999999999999999999999999999999764321           1223344456676 899999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +.+|+++  ++++|+++.+|||..+
T Consensus       232 ~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        232 ALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HHHHhCcccccccCcEEeecCCEeC
Confidence            9999974  6899999999999865

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=5.2e-42  Score=279.59  Aligned_cols=240  Identities=29%  Similarity=0.430  Sum_probs=205.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.. +..+..++.+.++.++++|++|++++.++++++.+.++++|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            67999999999999999999999999999999998753 22222334466789999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|.....++.+      .+.+++++.+++|+.+++.+++.+++.|.++..     .++||++||..+..+.+...
T Consensus        83 ~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~~~  151 (248)
T TIGR01832        83 ILVNNAGIIRRADAEE------FSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR-----GGKIINIASMLSFQGGIRVP  151 (248)
T ss_pred             EEEECCCCCCCCChhh------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-----CeEEEEEecHHhccCCCCCc
Confidence            9999999875544444      688999999999999999999999999976421     47999999999998888889


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      .|+++|++++++++++++|+.++||+|++++||+++|++.+...  +...+...+..|. +++.+|+|+|+++.+|++  
T Consensus       152 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  230 (248)
T TIGR01832       152 SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPA-GRWGTPDDIGGPAVFLASSA  230 (248)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999865322  1222334455676 899999999999999997  


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      +.+++|+++.+|||+.+
T Consensus       231 ~~~~~G~~i~~dgg~~~  247 (248)
T TIGR01832       231 SDYVNGYTLAVDGGWLA  247 (248)
T ss_pred             ccCcCCcEEEeCCCEec
Confidence            46899999999999753

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.4e-42  Score=288.31  Aligned_cols=237  Identities=30%  Similarity=0.440  Sum_probs=203.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc--hhHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS--EGESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~--~~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||++|||++++++|+++|++|++++++.+  ..++..++   .+.++.+++||++|+++++++++++.+.+
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999887643  23333333   35678899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||||.... .++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+..+
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~~~iv~~sS~~~~~~  198 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIAD------ITTEQFDATFKTNVYAMFWLCKAAIPHLPP--------GASIINTGSIQSYQP  198 (300)
T ss_pred             CCCCEEEECCcccCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--------CCEEEEECCccccCC
Confidence            999999999997532 23333      789999999999999999999999999864        479999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--chHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .+++..|+++|+++++|+++++.|+.++||+||+|+||+++|++...  ..++..+.+....|. ++...|+|+|..+++
T Consensus       199 ~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~~~~  277 (300)
T PRK06128        199 SPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPM-KRPGQPVEMAPLYVL  277 (300)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCC-CCCcCHHHHHHHHHH
Confidence            88999999999999999999999999999999999999999998643  223444445556676 899999999999999


Q ss_pred             Hhc--CCCcccceEEecCCccc
Q psy12833        234 IIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |++  +.+++|+.|.+|||+.+
T Consensus       278 l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        278 LASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HhCccccCccCcEEeeCCCEeC
Confidence            997  36899999999999865

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-42  Score=280.50  Aligned_cols=238  Identities=34%  Similarity=0.464  Sum_probs=206.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|++|||||+++||++++++|+++|++|++++|+.+.. +...++ +.++.++++|++|+++++++++++.+.++++|
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999999987643 333333 45677899999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|.....++.+      .+.+++++.+++|+.+++++++.+.+.|.++.      .++||++||..+..+.+...
T Consensus        92 ~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~  159 (255)
T PRK06841         92 ILVNSAGVALLAPAED------VSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG------GGKIVNLASQAGVVALERHV  159 (255)
T ss_pred             EEEECCCCCCCCChhh------CCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC------CceEEEEcchhhccCCCCCc
Confidence            9999999865444433      68899999999999999999999999998765      68999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      .|+++|+++++++++++.|++++||+++.|+||+++|++.... ..+..+.+.+..|. +++.+|+|+|+.+++++++  
T Consensus       160 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~  238 (255)
T PRK06841        160 AYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPA-GRFAYPEEIAAAALFLASDAA  238 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999999976432 22223344556676 8999999999999999974  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      .+++|+++.+|||+++
T Consensus       239 ~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        239 AMITGENLVIDGGYTI  254 (255)
T ss_pred             cCccCCEEEECCCccC
Confidence            6899999999999875

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=6.8e-43  Score=287.18  Aligned_cols=241  Identities=30%  Similarity=0.430  Sum_probs=202.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|+++||||++|||++++++|+++|++|++++|+.+.++++.++.+.++.++++|++|.++++++++++.+.++++|+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            47899999999999999999999999999999999988877776655667889999999999999999999999999999


Q ss_pred             EEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||||.... .++.+..  .+...++|++.+++|+.+++.++++++|.|.++       .+++|+++|..+..+.++..
T Consensus        83 li~~Ag~~~~~~~~~~~~--~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~  153 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIP--DDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-------RGSVIFTISNAGFYPNGGGP  153 (262)
T ss_pred             EEECCCCCccCCccccCC--chhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-------CCCEEEEeccceecCCCCCc
Confidence            9999997532 1222210  011235799999999999999999999999764       37899999999998888888


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hH------HHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NE------KVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      .|+++|+|+++|+++++.|++++ |+||+|+||+++|++....    .+      ...+...+..|. +|+.+|+|+|+.
T Consensus       154 ~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~eva~~  231 (262)
T TIGR03325       154 LYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPI-GRMPDAEEYTGA  231 (262)
T ss_pred             hhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCC-CCCCChHHhhhh
Confidence            99999999999999999999887 9999999999999986421    11      112333445676 999999999999


Q ss_pred             HHHHhcC---CCcccceEEecCCccc
Q psy12833        231 VQSIITN---PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~---~~~~G~~i~~~gG~~~  253 (254)
                      ++||+++   .+++|+++.+|||+.+
T Consensus       232 ~~~l~s~~~~~~~tG~~i~vdgg~~~  257 (262)
T TIGR03325       232 YVFFATRGDTVPATGAVLNYDGGMGV  257 (262)
T ss_pred             eeeeecCCCcccccceEEEecCCeee
Confidence            9999974   4789999999999764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.8e-42  Score=279.25  Aligned_cols=246  Identities=29%  Similarity=0.388  Sum_probs=206.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCC-
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK-   78 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~-   78 (254)
                      |+++|++|||||++|||+++++.|+++|++|+++.+ +.+..+++..+++.++.++++|++|+++++++++++.+.+++ 
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            578899999999999999999999999999988765 445555665666667889999999999999999999998887 


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||...........+..+.+.+++++.+++|+.+++.+++.+++.|.++.      .++|+++||..+..+.++
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~iss~~~~~~~~~  155 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG------FGRIINIGTNLFQNPVVP  155 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC------CeEEEEECCccccCCCCC
Confidence            99999999864221101111233478999999999999999999999999997765      589999999888777777


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-chHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-LNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      +..|+++|+++++++++++.++.++||+||+|+||+++|+.... ..++..+.+.+..|. +++.+|+|+|+.+.+|++ 
T Consensus       156 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~  234 (253)
T PRK08642        156 YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPL-RKVTTPQEFADAVLFFASP  234 (253)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHcCc
Confidence            88999999999999999999999999999999999999985432 234444455566777 889999999999999997 


Q ss_pred             -CCCcccceEEecCCccc
Q psy12833        237 -NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 -~~~~~G~~i~~~gG~~~  253 (254)
                       +.+++|+.|.+|||+.+
T Consensus       235 ~~~~~~G~~~~vdgg~~~  252 (253)
T PRK08642        235 WARAVTGQNLVVDGGLVM  252 (253)
T ss_pred             hhcCccCCEEEeCCCeec
Confidence             47999999999999764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.2e-42  Score=279.55  Aligned_cols=234  Identities=26%  Similarity=0.386  Sum_probs=201.2

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCC-----------chhHHHHHH---hCCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPT-----------SEGESVAKE---LGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~-----------~~~~~~~~~---~~~~~~~~~~Dls~~~~~   65 (254)
                      ++||++|||||+  +|||++++++|+++|++|++++|+.           +...+..++   .+.++.++++|++|++++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            579999999999  4999999999999999999876431           112222222   356788999999999999


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEE
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVII  145 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii  145 (254)
                      +++++++.+.++++|++|||||.....++.+      .+.++|++.+++|+.+++.+++.++|.|.++.      .++||
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv  151 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSN------LTAEELDKHYMVNVRATTLLSSQFARGFDKKS------GGRII  151 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC------CeEEE
Confidence            9999999999999999999999765444444      79999999999999999999999999998765      68999


Q ss_pred             EEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHH
Q psy12833        146 NTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       146 ~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (254)
                      ++||..+..+.+++..|+++|+++++|+++++.|+.++||+|++|+||+++|++..   +...+.+....|. ++..+|+
T Consensus       152 ~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~---~~~~~~~~~~~~~-~~~~~~~  227 (256)
T PRK12859        152 NMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT---EEIKQGLLPMFPF-GRIGEPK  227 (256)
T ss_pred             EEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC---HHHHHHHHhcCCC-CCCcCHH
Confidence            99999999999999999999999999999999999999999999999999998643   2333444455666 7888999


Q ss_pred             HHHHHHHHHhcC--CCcccceEEecCCc
Q psy12833        226 EFAQLVQSIITN--PLINGEVIRIDGAL  251 (254)
Q Consensus       226 ~va~~~~~l~~~--~~~~G~~i~~~gG~  251 (254)
                      |+|+.+.+++++  .+++|+++.+|||+
T Consensus       228 d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        228 DAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHHHHhCccccCccCcEEEeCCCc
Confidence            999999999974  68999999999995

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=9.4e-42  Score=276.19  Aligned_cols=234  Identities=19%  Similarity=0.200  Sum_probs=198.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +|++|||||++|||++++++|+++|++|++++|+.+...+..++.  .+.++.+|++|+++++++++++.+.++++|++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence            479999999999999999999999999999999876544333332  378899999999999999999999999999999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      ||||........+      .+.++|++.+++|+.+++.+++.+++.|.+...    ..++|+++||..+..+.+++..|+
T Consensus        80 ~~ag~~~~~~~~~------~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~----~~g~iv~~ss~~~~~~~~~~~~Y~  149 (236)
T PRK06483         80 HNASDWLAEKPGA------PLADVLARMMQIHVNAPYLLNLALEDLLRGHGH----AASDIIHITDYVVEKGSDKHIAYA  149 (236)
T ss_pred             ECCccccCCCcCc------cCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC----CCceEEEEcchhhccCCCCCccHH
Confidence            9999754332222      678999999999999999999999999976531    137899999999988888899999


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccc
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGE  243 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~  243 (254)
                      ++|+++++|+++++.|+++ +|+||+|+||++.++...  .+...+......|. ++...|+|+|+.+.||+++.+++|+
T Consensus       150 asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~G~  225 (236)
T PRK06483        150 ASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD--DAAYRQKALAKSLL-KIEPGEEEIIDLVDYLLTSCYVTGR  225 (236)
T ss_pred             HHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC--CHHHHHHHhccCcc-ccCCCHHHHHHHHHHHhcCCCcCCc
Confidence            9999999999999999987 599999999999876432  22233333445566 7888999999999999998999999


Q ss_pred             eEEecCCccc
Q psy12833        244 VIRIDGALRM  253 (254)
Q Consensus       244 ~i~~~gG~~~  253 (254)
                      ++.+|||.++
T Consensus       226 ~i~vdgg~~~  235 (236)
T PRK06483        226 SLPVDGGRHL  235 (236)
T ss_pred             EEEeCccccc
Confidence            9999999875

>KOG1205|consensus

Probab=100.00  E-value=1.2e-42  Score=280.51  Aligned_cols=188  Identities=30%  Similarity=0.424  Sum_probs=172.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CC-CceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GP-DVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +.||+|+|||||+|||+++|.+|+++|++++++.|+..+++++.+++    .. +++.++||++|.++++++++++.+++
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999999888887665    33 59999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      |++|++|||||.........      .+.+++...|++|++|+.+++|+++|+|.+++      .|+||++||++|+.+.
T Consensus        90 g~vDvLVNNAG~~~~~~~~~------~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~------~GhIVvisSiaG~~~~  157 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLED------TDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN------DGHIVVISSIAGKMPL  157 (282)
T ss_pred             CCCCEEEecCcccccccccc------CcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC------CCeEEEEeccccccCC
Confidence            99999999999987433333      78899999999999999999999999999986      6999999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCC--cEEEEEecCCcccccccc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAG--IRVNTIAPGLFDTPLLSM  202 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~~~t~~~~~  202 (254)
                      |....|++||+|+.+|+.+|+.|+.+.+  |++ .++||+++|++...
T Consensus       158 P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  158 PFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             CcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence            9999999999999999999999999987  566 99999999997643

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=278.81  Aligned_cols=238  Identities=32%  Similarity=0.495  Sum_probs=207.4

Q ss_pred             CCCcEEEEeCCCC-hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----C-CCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGAS-GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----G-PDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~-giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +++|+++||||++ |||+++++.|+++|++|++++|+.+++++..+++    + .++.++++|++++++++++++++.+.
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999985 9999999999999999999999887776665544    2 46889999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++|||+|......+.+      .+.++|++.+++|+.+++.+++.++|.|..+..     .++|++++|..+..+
T Consensus        95 ~g~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~g~iv~~ss~~~~~~  163 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVD------MTDDEWSRVLDVTLTGTFRATRAALRYMRARGH-----GGVIVNNASVLGWRA  163 (262)
T ss_pred             cCCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CcEEEEeCchhhcCC
Confidence            999999999999765444444      788999999999999999999999999976531     479999999999988


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .++...|+++|+|+++++++++.|++++||+|++++||+++|++.... .++..+.+.+..|. ++...|+|+|+.++||
T Consensus       164 ~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~-~r~~~p~~va~~~~~l  242 (262)
T PRK07831        164 QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF-GRAAEPWEVANVIAFL  242 (262)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            888999999999999999999999999999999999999999986543 33444445556666 8999999999999999


Q ss_pred             hcC--CCcccceEEecCCc
Q psy12833        235 ITN--PLINGEVIRIDGAL  251 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~  251 (254)
                      +++  .+++|+++.+|+|+
T Consensus       243 ~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        243 ASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             cCchhcCcCCceEEeCCCC
Confidence            974  69999999999975

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2e-41  Score=278.34  Aligned_cols=241  Identities=33%  Similarity=0.482  Sum_probs=207.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+ ..+...+++   +.++.++++|++|.++++++++.+.++++
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999888643 344444433   56688999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||+|.....++.+      .+.+++++.+++|+.+++.+++.+++.|.++..     .++||++||..+..+.+
T Consensus        85 ~id~lv~~ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~-----~g~iv~~sS~~~~~~~~  153 (261)
T PRK08936         85 TLDVMINNAGIENAVPSHE------MSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI-----KGNIINMSSVHEQIPWP  153 (261)
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CcEEEEEccccccCCCC
Confidence            9999999999765554444      788999999999999999999999999987531     48999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ++..|+++|+|+.++++.++.|+.++||+|++|+||+++|++....  .++......+..|. +++.+|+|+++.+.+|+
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  232 (261)
T PRK08936        154 LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM-GYIGKPEEIAAVAAWLA  232 (261)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999999986432  23333344455666 89999999999999999


Q ss_pred             c--CCCcccceEEecCCcccC
Q psy12833        236 T--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       236 ~--~~~~~G~~i~~~gG~~~~  254 (254)
                      +  ..+++|+.+.+|||++++
T Consensus       233 s~~~~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        233 SSEASYVTGITLFADGGMTLY  253 (261)
T ss_pred             CcccCCccCcEEEECCCcccC
Confidence            7  478999999999998763

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-42  Score=279.79  Aligned_cols=235  Identities=25%  Similarity=0.353  Sum_probs=202.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|+++|||+++|||++++++|+++|++|++++|+.+++++..+++    +.++.++++|++|+++++++++.    ++
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g   80 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AG   80 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hC
Confidence            57899999999999999999999999999999999988777766554    45688999999999999988764    47


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||+|.....++.+      .+.++|++.+++|+.+++++++++.|.|.+++      .++|+++||..+..+.+
T Consensus        81 ~id~lv~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~iss~~~~~~~~  148 (259)
T PRK06125         81 DIDILVNNAGAIPGGGLDD------VDDAAWRAGWELKVFGYIDLTRLAYPRMKARG------SGVIVNVIGAAGENPDA  148 (259)
T ss_pred             CCCEEEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CcEEEEecCccccCCCC
Confidence            8999999999865444444      79999999999999999999999999998765      58999999999988888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----------hHHHHHHHHhcCCCCCCCCCHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----------NEKVRNFLARSIPAPQRLGHPDEF  227 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~v  227 (254)
                      ++..|+++|+|+.+++++++.|+.++||+||+++||+++|++....          .++..+.+....|. +++.+|+|+
T Consensus       149 ~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v  227 (259)
T PRK06125        149 DYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPL-GRPATPEEV  227 (259)
T ss_pred             CchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCc-CCCcCHHHH
Confidence            8889999999999999999999999999999999999999964322          12222334445666 888999999


Q ss_pred             HHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        228 AQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       228 a~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |+.++||++  ..++||++|.+|||++.
T Consensus       228 a~~~~~l~~~~~~~~~G~~i~vdgg~~~  255 (259)
T PRK06125        228 ADLVAFLASPRSGYTSGTVVTVDGGISA  255 (259)
T ss_pred             HHHHHHHcCchhccccCceEEecCCeee
Confidence            999999997  46999999999999763

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-41  Score=278.98  Aligned_cols=238  Identities=28%  Similarity=0.450  Sum_probs=209.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999988777766555   457889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++.+      .+.+++++.+++|+.+++.+++.++|.|.++.      .++||++||..+..+.++
T Consensus        88 id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  155 (265)
T PRK07097         88 IDILVNNAGIIKRIPMLE------MSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG------HGKIINICSMMSELGRET  155 (265)
T ss_pred             CCEEEECCCCCCCCCccc------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC------CcEEEEEcCccccCCCCC
Confidence            999999999876554444      78999999999999999999999999998765      689999999999888888


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH--------HHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--------KVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      +..|+++|+++.++++++++|+.++||+|++|+||.++|++......        ...++.....|. +++.+|+|+|+.
T Consensus       156 ~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  234 (265)
T PRK07097        156 VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPA-ARWGDPEDLAGP  234 (265)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCc-cCCcCHHHHHHH
Confidence            99999999999999999999999999999999999999997654321        222334445565 789999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCcc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      +.+++++  .+++|+.+.+|||..
T Consensus       235 ~~~l~~~~~~~~~g~~~~~~gg~~  258 (265)
T PRK07097        235 AVFLASDASNFVNGHILYVDGGIL  258 (265)
T ss_pred             HHHHhCcccCCCCCCEEEECCCce
Confidence            9999974  689999999999964

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.7e-42  Score=307.17  Aligned_cols=237  Identities=34%  Similarity=0.530  Sum_probs=209.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ..||++|||||++|||++++++|+++|++|++++|+.+.++++.++++.++..+++|++|+++++++++++.+.++++|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36899999999999999999999999999999999998888888877777888999999999999999999999999999


Q ss_pred             EEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||||.... .++.+      .+.++|++.+++|+.+++++++.++|.|.  +      .++||++||..+..+.++..
T Consensus       347 li~nAg~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~------~g~iv~isS~~~~~~~~~~~  412 (520)
T PRK06484        347 LVNNAGIAEVFKPSLE------QSAEDFTRVYDVNLSGAFACARAAARLMS--Q------GGVIVNLGSIASLLALPPRN  412 (520)
T ss_pred             EEECCCCcCCCCChhh------CCHHHHHHHHHhCcHHHHHHHHHHHHHhc--c------CCEEEEECchhhcCCCCCCc
Confidence            9999997532 23333      78999999999999999999999999992  2      58999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      .|+++|+++++|+++++.|+.++||+||+|+||+++|++.....   +...+.+.+..|. ++..+|+|+|+.++||++ 
T Consensus       413 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dia~~~~~l~s~  491 (520)
T PRK06484        413 AYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL-GRLGDPEEVAEAIAFLASP  491 (520)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999999865432   2223344556676 889999999999999997 


Q ss_pred             -CCCcccceEEecCCccc
Q psy12833        237 -NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 -~~~~~G~~i~~~gG~~~  253 (254)
                       +.+++|+++.+|||+..
T Consensus       492 ~~~~~~G~~i~vdgg~~~  509 (520)
T PRK06484        492 AASYVNGATLTVDGGWTA  509 (520)
T ss_pred             cccCccCcEEEECCCccC
Confidence             46899999999999754

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.8e-41  Score=277.97  Aligned_cols=239  Identities=26%  Similarity=0.401  Sum_probs=210.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.+++||++|+++++++++++.+.+
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999999988877776654     3468889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||+|.....+..+      .+.+++++.+++|+.+++.++++++|.|.+++      .++|+++||..+..+.
T Consensus        87 g~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~ii~~sS~~~~~~~  154 (257)
T PRK09242         87 DGLHILVNNAGGNIRKAAID------YTEDEWRGIFETNLFSAFELSRYAHPLLKQHA------SSAIVNIGSVSGLTHV  154 (257)
T ss_pred             CCCCEEEECCCCCCCCChhh------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC------CceEEEECccccCCCC
Confidence            99999999999764444333      78999999999999999999999999998765      6899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ++...|+++|++++.++++++.|+.+.||++++++||+++|++....  .++..+......|. ++..+|+|++..+.+|
T Consensus       155 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l  233 (257)
T PRK09242        155 RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM-RRVGEPEEVAAAVAFL  233 (257)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999987543  23333444455565 8889999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .+++|+.+.+|||+..
T Consensus       234 ~~~~~~~~~g~~i~~~gg~~~  254 (257)
T PRK09242        234 CMPAASYITGQCIAVDGGFLR  254 (257)
T ss_pred             hCcccccccCCEEEECCCeEe
Confidence            964  5889999999999864

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.1e-41  Score=277.20  Aligned_cols=236  Identities=27%  Similarity=0.446  Sum_probs=207.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++++|++|.+++.++++.+.+.+++
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999888777666554   456888999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++ +      .+.+++++.+++|+.+++++++++.|.|.+.+      .++||++||..+..+.++
T Consensus        89 ~d~li~~ag~~~~~~~-~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~  155 (255)
T PRK06113         89 VDILVNNAGGGGPKPF-D------MPMADFRRAYELNVFSFFHLSQLVAPEMEKNG------GGVILTITSMAAENKNIN  155 (255)
T ss_pred             CCEEEECCCCCCCCCC-C------CCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC------CcEEEEEecccccCCCCC
Confidence            9999999997544322 2      68899999999999999999999999997654      579999999999999989


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +..|+++|+|+++++++++.++.+.||+||+++||+++|++.... .++..+...+..|. ++..+|+|+++++++|+++
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~  234 (255)
T PRK06113        156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI-RRLGQPQDIANAALFLCSP  234 (255)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999999999999986543 33344445556666 8889999999999999974


Q ss_pred             --CCcccceEEecCCc
Q psy12833        238 --PLINGEVIRIDGAL  251 (254)
Q Consensus       238 --~~~~G~~i~~~gG~  251 (254)
                        .+++|++|.+|||.
T Consensus       235 ~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        235 AASWVSGQILTVSGGG  250 (255)
T ss_pred             cccCccCCEEEECCCc
Confidence              68999999999984

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-41  Score=276.77  Aligned_cols=238  Identities=27%  Similarity=0.412  Sum_probs=205.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +|++|||||++|||++++++|+++|++|+++.+ +.+.+++..+++   +.+++++++|++|+++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999998865 444555554443   5678999999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||+|......+.+      .+.+++++.+.+|+.+++.+++++.+.|.++..     .++||++||..+..+.++.
T Consensus        82 d~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----~g~ii~isS~~~~~~~~~~  150 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLD------MDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ-----GGRIINITSVHEHTPLPGA  150 (256)
T ss_pred             CEEEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CeEEEEEeeccccCCCCCc
Confidence            99999999865544444      789999999999999999999999999976431     4799999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      ..|+++|+++.+++++++.++.++||++++|+||+++|++.....++.........|. ++..+|+|+++.+.+++++  
T Consensus       151 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  229 (256)
T PRK12743        151 SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPL-GRPGDTHEIASLVAWLCSEGA  229 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999999998654434433444455666 7889999999999999973  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      .+++|+++.+|||+++
T Consensus       230 ~~~~G~~~~~dgg~~~  245 (256)
T PRK12743        230 SYTTGQSLIVDGGFML  245 (256)
T ss_pred             cCcCCcEEEECCCccc
Confidence            6899999999999765

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-41  Score=277.95  Aligned_cols=238  Identities=30%  Similarity=0.467  Sum_probs=203.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|+++||||++|||++++++|+++|++|++++|+.+ ..+..+++   +.++.+++||++|+++++++++++.+++++
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999864 33333332   456889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~~  157 (254)
                      +|++|||+|.....++.+      .+.+++++.+++|+.+++.+++.+++.+.+..      .++|+++||..+. .+.+
T Consensus        83 id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~  150 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLD------MSDEDRDFHIDINIKGVWNVTKAVLPEMIARK------DGRIVMMSSVTGDMVADP  150 (263)
T ss_pred             CCEEEECCCcCCCCCccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC------CcEEEEECcHHhcccCCC
Confidence            999999999765444444      68899999999999999999999999987654      5799999998874 5667


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--------HHHHHHHHhcCCCCCCCCCHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--------EKVRNFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~va~  229 (254)
                      ++..|+++|+++++++++++.|+.++||+|++++||+++|++.....        ++..+.+.+..|. +++.+|+|+|+
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~va~  229 (263)
T PRK08226        151 GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL-RRLADPLEVGE  229 (263)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC-CCCCCHHHHHH
Confidence            78899999999999999999999999999999999999999865321        2233444455666 88899999999


Q ss_pred             HHHHHhc--CCCcccceEEecCCccc
Q psy12833        230 LVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       230 ~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .+.||++  +.+++|+++.+|||.++
T Consensus       230 ~~~~l~~~~~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        230 LAAFLASDESSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             HHHHHcCchhcCCcCceEeECCCccc
Confidence            9999996  46999999999999875

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-41  Score=275.68  Aligned_cols=238  Identities=30%  Similarity=0.458  Sum_probs=204.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ||+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|+++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            689999999999999999999999999999999988777766554   45788999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|.....++.+      .+.++|++.+++|+.+++++++++++.|.+...     .++|+++||..+..+.+...
T Consensus        81 ~lI~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~g~ii~isS~~~~~~~~~~~  149 (252)
T PRK07677         81 ALINNAAGNFICPAED------LSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI-----KGNIINMVATYAWDAGPGVI  149 (252)
T ss_pred             EEEECCCCCCCCCccc------CCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC-----CEEEEEEcChhhccCCCCCc
Confidence            9999999654333333      789999999999999999999999999876421     48999999999998888889


Q ss_pred             cchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccc-ccc--chHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        161 AYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPL-LSM--LNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      .|+++|+|+++|+++++.|+.+ +||++++++||+++|+. ...  ..++..+.+.+..+. +++.+|+|+++.+.+|++
T Consensus       150 ~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~  228 (252)
T PRK07677        150 HSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL-GRLGTPEEIAGLAYFLLS  228 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999975 69999999999999643 221  133444455556666 889999999999999997


Q ss_pred             C--CCcccceEEecCCccc
Q psy12833        237 N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~  253 (254)
                      +  .+++|+++.+|||+++
T Consensus       229 ~~~~~~~g~~~~~~gg~~~  247 (252)
T PRK07677        229 DEAAYINGTCITMDGGQWL  247 (252)
T ss_pred             ccccccCCCEEEECCCeec
Confidence            4  6899999999999875

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-41  Score=276.07  Aligned_cols=239  Identities=29%  Similarity=0.441  Sum_probs=211.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++   +.++.++.||++|++++.++++++.+.+++
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999987777666544   556889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++.+      .+.++|++.+++|+.+++.+++.+++.|.+++      .++||++||..+..+.++
T Consensus        89 id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~~ss~~~~~~~~~  156 (256)
T PRK06124         89 LDILVNNVGARDRRPLAE------LDDAAIRALLETDLVAPILLSRLAAQRMKRQG------YGRIIAITSIAGQVARAG  156 (256)
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEEeechhccCCCC
Confidence            999999999865544444      78899999999999999999999999998765      689999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ...|+++|++++++++.++.|+.+.||+++.++||.++|++....  .++..+.+....+. +++.+|+|++..+++|++
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~  235 (256)
T PRK06124        157 DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPL-GRWGRPEEIAGAAVFLAS  235 (256)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999975432  23444555556666 889999999999999997


Q ss_pred             C--CCcccceEEecCCccc
Q psy12833        237 N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~  253 (254)
                      +  .+++|+.+.+|||..+
T Consensus       236 ~~~~~~~G~~i~~dgg~~~  254 (256)
T PRK06124        236 PAASYVNGHVLAVDGGYSV  254 (256)
T ss_pred             cccCCcCCCEEEECCCccc
Confidence            4  5899999999999753

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.5e-42  Score=284.05  Aligned_cols=236  Identities=16%  Similarity=0.241  Sum_probs=187.8

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH-------------HhCC-----CceEEecCCCC
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSEGESVAK-------------ELGP-----DVKFAPVDVTS   61 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~-------------~~~~-----~~~~~~~Dls~   61 (254)
                      ++||++||||++  +|||+++|+.|+++|++|++.++.+ .++...+             ..+.     ++..+.+|+++
T Consensus         6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            469999999995  9999999999999999999976531 1110000             0011     11112334333


Q ss_pred             H------------------HHHHHHHHHHHHHcCCCcEEEeCCccCC--CccccccCCCCcCCHHHHHHHHHHHhHHHHH
Q psy12833         62 E------------------EDVQKAVLLCKDSFGKLDVNVNCAGISC--AFKIFNYNKGTVHSLDDFKRILLVNTVGTFN  121 (254)
Q Consensus        62 ~------------------~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  121 (254)
                      +                  ++++++++++.+++|++|++|||||...  ..++.+      .+.++|++.+++|+.++++
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~------~~~e~~~~~~~vNl~g~~~  158 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLE------TSRKGYLAALSTSSYSFVS  158 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhh------CCHHHHHHHHHHHhHHHHH
Confidence            3                  3689999999999999999999998643  233333      8999999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc-cchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccc
Q psy12833        122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPL  199 (254)
Q Consensus       122 l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~  199 (254)
                      ++++++|.|.+        .|+|++++|..+..+.|.+. .|+++|+|+++|+++++.|+++ +||+||+|+||+++|++
T Consensus       159 l~~a~~p~m~~--------~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~  230 (299)
T PRK06300        159 LLSHFGPIMNP--------GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRA  230 (299)
T ss_pred             HHHHHHHHhhc--------CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChh
Confidence            99999999964        47899999999988888765 8999999999999999999987 59999999999999998


Q ss_pred             cccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        200 LSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       200 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      .....  ++..+......|. ++...|+|++..+.||+++  .+++|+++.+|||+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        231 GKAIGFIERMVDYYQDWAPL-PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             hhcccccHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence            65321  2333444455676 8899999999999999974  6999999999999875

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=2.8e-41  Score=280.18  Aligned_cols=241  Identities=33%  Similarity=0.477  Sum_probs=202.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..++..+++.  .++.++++|++|+++++++++.+.+.++++
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999998877776666653  468899999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||......    ....+.+.+++++.+++|+.+++++++++.+.|.++.      .++|++++|..+..+.++.
T Consensus        96 d~li~~Ag~~~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~ii~isS~~~~~~~~~~  165 (280)
T PLN02253         96 DIMVNNAGLTGPPC----PDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK------KGSIVSLCSVASAIGGLGP  165 (280)
T ss_pred             CEEEECCCcCCCCC----CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC------CceEEEecChhhcccCCCC
Confidence            99999999754211    1122378999999999999999999999999998755      6899999999998887888


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-H-----HHH----HHHHhcCCCCCCCCCHHHHHH
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-E-----KVR----NFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~-----~~~----~~~~~~~~~~~~~~~~~~va~  229 (254)
                      ..|+++|+++++++++++.|++++||+|++++||.++|++..... +     ...    ....+..+..++..+|+|+|+
T Consensus       166 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~  245 (280)
T PLN02253        166 HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVAN  245 (280)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHH
Confidence            899999999999999999999999999999999999998743211 1     111    111122232255679999999


Q ss_pred             HHHHHhc--CCCcccceEEecCCcc
Q psy12833        230 LVQSIIT--NPLINGEVIRIDGALR  252 (254)
Q Consensus       230 ~~~~l~~--~~~~~G~~i~~~gG~~  252 (254)
                      .++++++  +.+++|+.|.+|||.+
T Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
T PLN02253        246 AVLFLASDEARYISGLNLMIDGGFT  270 (280)
T ss_pred             HHHhhcCcccccccCcEEEECCchh
Confidence            9999997  4699999999999976

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=284.33  Aligned_cols=237  Identities=21%  Similarity=0.235  Sum_probs=188.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC----------chhHHHHHHh---CCCceEEecCCCCHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT----------SEGESVAKEL---GPDVKFAPVDVTSEEDVQKA   68 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~----------~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~   68 (254)
                      |+||+++||||++|||++++++|+++|++|++++|+.          +.+++..+++   +.++.+++||++|+++++++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            5789999999999999999999999999999999974          3344444433   45678899999999999999


Q ss_pred             HHHHHHHcCCCcEEEeCC-ccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEE
Q psy12833         69 VLLCKDSFGKLDVNVNCA-GISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINT  147 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~v  147 (254)
                      ++++.+.++++|++|||| |......+  ..+..+.+.++|++.+++|+.+++.++++++|.|.++.      .|+||++
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~------~g~IV~i  157 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEW--GKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP------GGLVVEI  157 (305)
T ss_pred             HHHHHHHcCCccEEEECCccccccccc--CCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC------CcEEEEE
Confidence            999999999999999999 74211000  01223378899999999999999999999999998764      5899999


Q ss_pred             ecccccc---CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHHHHHHHHhcCCCCCCC
Q psy12833        148 ASIAAYE---GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRL  221 (254)
Q Consensus       148 ss~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~  221 (254)
                      ||..+..   +.+....|+++|+|+.+|+++|+.|+++.||+||+|+||+++|++....   .++.........|..++.
T Consensus       158 sS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (305)
T PRK08303        158 TDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAIS  237 (305)
T ss_pred             CCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccC
Confidence            9976543   2345678999999999999999999999999999999999999975321   111111111234432666


Q ss_pred             CCHHHHHHHHHHHhcC---CCcccceEE
Q psy12833        222 GHPDEFAQLVQSIITN---PLINGEVIR  246 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~---~~~~G~~i~  246 (254)
                      .+|||+|+.+.||+++   .+++|++|.
T Consensus       238 ~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        238 ETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             CCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            7899999999999975   378999886

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-41  Score=274.61  Aligned_cols=234  Identities=26%  Similarity=0.385  Sum_probs=202.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.     ...+.++.++++|++|+++++++++.+.+.++++|+
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999998654     122456889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||......+.+      .+.+++++.+++|+.+++.+++.+.+.|.++..     .++||++||..+..+.+++..
T Consensus        79 vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~g~ii~isS~~~~~~~~~~~~  147 (252)
T PRK07856         79 LVNNAGGSPYALAAE------ASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG-----GGSIVNIGSVSGRRPSPGTAA  147 (252)
T ss_pred             EEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CcEEEEEcccccCCCCCCCch
Confidence            999999765444434      788999999999999999999999999986421     479999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      |+++|+++++|++.++.|+.++ |++++++||+++|++....  .++..+.+.+..|. ++...|+|+|+.+++|+++  
T Consensus       148 Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~va~~~~~L~~~~~  225 (252)
T PRK07856        148 YGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL-GRLATPADIAWACLFLASDLA  225 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHcCccc
Confidence            9999999999999999999888 9999999999999976432  22333344556676 8899999999999999974  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      .+++|+.|.+|||...
T Consensus       226 ~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        226 SYVSGANLEVHGGGER  241 (252)
T ss_pred             CCccCCEEEECCCcch
Confidence            6899999999999753

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-41  Score=278.16  Aligned_cols=239  Identities=31%  Similarity=0.490  Sum_probs=202.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+....+      ..++.++++|++|+++++++++++.+.++++|+
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999876543      236788999999999999999999999999999


Q ss_pred             EEeCCccCCCccccc---cCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         82 NVNCAGISCAFKIFN---YNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        82 li~~ag~~~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|||||......+.+   ..+..+.+.++|++.+++|+.+++.+++++.+.|.+++      .++||++||..+..+.++
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  154 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH------DGVIVNMSSEAGLEGSEG  154 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC------CcEEEEEccccccCCCCC
Confidence            999999764433221   11223478999999999999999999999999998765      689999999999999889


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcc-ccccccc------------hHHHHHHHHh--cCCCCCCCCC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFD-TPLLSML------------NEKVRNFLAR--SIPAPQRLGH  223 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~-t~~~~~~------------~~~~~~~~~~--~~~~~~~~~~  223 (254)
                      ...|+++|+++++|+++++.|++++||+||+|+||+++ |++....            .++..+.+.+  ..|. ++...
T Consensus       155 ~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~  233 (266)
T PRK06171        155 QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL-GRSGK  233 (266)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC-CCCCC
Confidence            99999999999999999999999999999999999997 5553211            1122233333  5676 89999


Q ss_pred             HHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        224 PDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       224 ~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |+|+|+++.||++  +.++||++|.+|||++.
T Consensus       234 ~~eva~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        234 LSEVADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             HHHhhhheeeeeccccccceeeEEEecCcccC
Confidence            9999999999997  47999999999999863

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.2e-40  Score=271.17  Aligned_cols=239  Identities=28%  Similarity=0.456  Sum_probs=206.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee-CCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |++|+++||||++|||++++++|+++|++|++.. ++....++..+++   +.++..+.||++|.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999988754 4444444444433   45678889999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||+|.....++.+      .+.+++++.+++|+.+++.+++.+.+.|.++.      .++|+++||..+..+.+
T Consensus        81 ~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~  148 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRK------MTREDWTAVIDTNLTSLFNVTKQVIDGMVERG------WGRIINISSVNGQKGQF  148 (246)
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CeEEEEEechhccCCCC
Confidence            9999999999865444444      78999999999999999999999999998765      58999999999998888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      ++..|+++|++++.++++++.|+.+.||++++++||+++|++.....++..+......|. .++.+++++++.+.+|+++
T Consensus       149 ~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~l~~~  227 (246)
T PRK12938        149 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPV-RRLGSPDEIGSIVAWLASE  227 (246)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCc-cCCcCHHHHHHHHHHHcCc
Confidence            899999999999999999999999999999999999999998765545544555555665 7889999999999999974


Q ss_pred             --CCcccceEEecCCccc
Q psy12833        238 --PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~~  253 (254)
                        .+++|+.+.+|||.++
T Consensus       228 ~~~~~~g~~~~~~~g~~~  245 (246)
T PRK12938        228 ESGFSTGADFSLNGGLHM  245 (246)
T ss_pred             ccCCccCcEEEECCcccC
Confidence              5899999999999765

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.6e-40  Score=272.08  Aligned_cols=238  Identities=32%  Similarity=0.478  Sum_probs=204.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||+++||||+++||++++++|+++|++|++++|+.++.++..++++.++.++++|++|+++++++++++.++++++|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            67899999999999999999999999999999999888777776666777899999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||......    .+..+.+.++|++.+++|+.+++.+++++.|.|.+.       .++||++||..+..+.+....
T Consensus        88 li~~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~g~ii~~sS~~~~~~~~~~~~  156 (255)
T PRK05717         88 LVCNAAIADPHN----TTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-------NGAIVNLASTRARQSEPDTEA  156 (255)
T ss_pred             EEECCCcccCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-------CcEEEEEcchhhcCCCCCCcc
Confidence            999999764321    111226889999999999999999999999999764       479999999999998888999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--C
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--P  238 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~  238 (254)
                      |+++|++++++++.++.++.. +++|++++||+++|++..... ....+......|. ++..+|+|+|..+.+++++  .
T Consensus       157 Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~  234 (255)
T PRK05717        157 YAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPA-GRVGTVEDVAAMVAWLLSRQAG  234 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccchHHHHHHhhcCCC-CCCcCHHHHHHHHHHHcCchhc
Confidence            999999999999999999976 499999999999998754321 2222223334566 8899999999999999974  6


Q ss_pred             CcccceEEecCCcc
Q psy12833        239 LINGEVIRIDGALR  252 (254)
Q Consensus       239 ~~~G~~i~~~gG~~  252 (254)
                      +++|+.+.+|||.+
T Consensus       235 ~~~g~~~~~~gg~~  248 (255)
T PRK05717        235 FVTGQEFVVDGGMT  248 (255)
T ss_pred             CccCcEEEECCCce
Confidence            88999999999975

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.6e-40  Score=270.18  Aligned_cols=240  Identities=29%  Similarity=0.497  Sum_probs=211.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|+++||||+++||++++++|+++|+.|++.+|+.+++++..++++.++.++.+|++|.++++++++++.+.++++|+
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999999999888888777766777889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||+|.....++.+      .+.+++++.+++|+.+++++++++.+.+.+++      .++||++||..+..+.+....
T Consensus        84 vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~  151 (245)
T PRK12936         84 LVNNAGITKDGLFVR------MSDEDWDSVLEVNLTATFRLTRELTHPMMRRR------YGRIINITSVVGVTGNPGQAN  151 (245)
T ss_pred             EEECCCCCCCCcccc------CCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC------CCEEEEECCHHhCcCCCCCcc
Confidence            999999865544444      67889999999999999999999998887655      689999999999998888999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~  239 (254)
                      |+.+|+++.++++.++.++...|+++++++||+++|++.....+...+......|. ++..+|+|+++.+.++++.  .+
T Consensus       152 Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~~~~~~~  230 (245)
T PRK12936        152 YCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPM-KRMGTGAEVASAVAYLASSEAAY  230 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCC-CCCcCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999999999999998765544444444455666 7888999999999999963  58


Q ss_pred             cccceEEecCCcccC
Q psy12833        240 INGEVIRIDGALRMI  254 (254)
Q Consensus       240 ~~G~~i~~~gG~~~~  254 (254)
                      ++|+++.+|||+.+|
T Consensus       231 ~~G~~~~~~~g~~~~  245 (245)
T PRK12936        231 VTGQTIHVNGGMAMI  245 (245)
T ss_pred             cCCCEEEECCCcccC
Confidence            899999999999875

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-40  Score=272.50  Aligned_cols=234  Identities=28%  Similarity=0.375  Sum_probs=195.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+. ..++..+++   +.++.++++|++|++++.++++++.+.+++
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999999999999999975 334444443   456888999999999999999999999999


Q ss_pred             CcEEEeCCccCC-CccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||... ..++.+      .+.+++++.+++|+.+++++++.++|.|.++.      .++||++||..+..  +
T Consensus        85 id~lv~nAg~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~--~  150 (260)
T PRK12823         85 IDVLINNVGGTIWAKPFEE------YEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG------GGAIVNVSSIATRG--I  150 (260)
T ss_pred             CeEEEECCccccCCCChhh------CChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCeEEEEcCccccC--C
Confidence            999999998642 223333      78899999999999999999999999998765      58999999987653  3


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-------------hHHHHHHHHhcCCCCCCCCCH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-------------NEKVRNFLARSIPAPQRLGHP  224 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~  224 (254)
                      +...|+++|+|++.|+++++.|++++||+|++++||+++|++....             .++..+......|. ++..+|
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  229 (260)
T PRK12823        151 NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM-KRYGTI  229 (260)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc-ccCCCH
Confidence            4568999999999999999999999999999999999999853110             11222233345566 888999


Q ss_pred             HHHHHHHHHHhcC--CCcccceEEecCCc
Q psy12833        225 DEFAQLVQSIITN--PLINGEVIRIDGAL  251 (254)
Q Consensus       225 ~~va~~~~~l~~~--~~~~G~~i~~~gG~  251 (254)
                      +|+|+.+++|+++  .+++|+.+.+|||.
T Consensus       230 ~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        230 DEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            9999999999974  58999999999996

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-40  Score=271.17  Aligned_cols=241  Identities=25%  Similarity=0.364  Sum_probs=207.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEE-eeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ||++++++||||++|||++++++|+++|++|++ ..|+.+..++..+++   +.++.++.+|++|++++.++++++.+.+
T Consensus         1 ~~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          1 VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999876 577776666555444   5678899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||+|.....++.+      .+.++++..+++|+.+++.+++++.+.|.+++      .++||++||..+..+.
T Consensus        81 ~~id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~~  148 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAME------LEESHWDWTMNINAKALLFCAQEAAKLMEKVG------GGKIISLSSLGSIRYL  148 (250)
T ss_pred             CCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CeEEEEEcchhhccCC
Confidence            99999999999765555444      78899999999999999999999999998765      6899999999888888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ++...|+++|+++++|+++++.++.+.||++++++||+++|++.....  .+..+......+. ++.++++|+|+.++++
T Consensus       149 ~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~  227 (250)
T PRK08063        149 ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPA-GRMVEPEDVANAVLFL  227 (250)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCC-CCCcCHHHHHHHHHHH
Confidence            888999999999999999999999999999999999999998864332  2333334444555 7789999999999999


Q ss_pred             hcC--CCcccceEEecCCcccC
Q psy12833        235 ITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      +++  .+++|+++.+|||.+++
T Consensus       228 ~~~~~~~~~g~~~~~~gg~~~~  249 (250)
T PRK08063        228 CSPEADMIRGQTIIVDGGRSLL  249 (250)
T ss_pred             cCchhcCccCCEEEECCCeeee
Confidence            964  57899999999998864

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-40  Score=270.35  Aligned_cols=237  Identities=27%  Similarity=0.424  Sum_probs=207.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|+++||||+++||++++++|+++|++|++++|+.+.+++..++++.++.+++||++|.+++.++++.+.+.++++|+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46899999999999999999999999999999999988777777777778899999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||+|.....++.+      .+.+++++.+++|+.+++.+++++.|.|..        .+++++++|..+..+.+....
T Consensus        84 vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~~~~i~~~S~~~~~~~~~~~~  149 (249)
T PRK06500         84 VFINAGVAKFAPLED------WDEAMFDRSFNTNVKGPYFLIQALLPLLAN--------PASIVLNGSINAHIGMPNSSV  149 (249)
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--------CCEEEEEechHhccCCCCccH
Confidence            999999765444333      688999999999999999999999998854        368999999888888888999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      |+.+|+++++++++++.|+.++||++++++||.++|++....      .+...+.+.+..|. ++..+|+|+|+.+.+++
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  228 (249)
T PRK06500        150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL-GRFGTPEEIAKAVLYLA  228 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999976431      12233344455566 78889999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .+++|+.+.+|||++-
T Consensus       229 ~~~~~~~~g~~i~~~gg~~~  248 (249)
T PRK06500        229 SDESAFIVGSEIIVDGGMSN  248 (249)
T ss_pred             CccccCccCCeEEECCCccc
Confidence            74  6999999999999874

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-41  Score=276.28  Aligned_cols=225  Identities=29%  Similarity=0.357  Sum_probs=189.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..+++   +.++.+++||++|++++.++++++ +.++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            589999998 699999999996 8999999999887777666555   456888999999999999999998 5678999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ----  156 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~----  156 (254)
                      ++|||||...             ..+++++.+++|+.+++++++.+.|.|.+        .++++++||.++..+.    
T Consensus        79 ~li~nAG~~~-------------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--------~g~iv~isS~~~~~~~~~~~  137 (275)
T PRK06940         79 GLVHTAGVSP-------------SQASPEAILKVDLYGTALVLEEFGKVIAP--------GGAGVVIASQSGHRLPALTA  137 (275)
T ss_pred             EEEECCCcCC-------------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--------CCCEEEEEecccccCcccch
Confidence            9999999741             23678999999999999999999999965        3678999998876542    


Q ss_pred             --------------------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hHH
Q psy12833        157 --------------------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NEK  206 (254)
Q Consensus       157 --------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~~  206 (254)
                                                +++..|++||+|+.+++++++.|+.++||+||+|+||+++|++....    .++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~  217 (275)
T PRK06940        138 EQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGD  217 (275)
T ss_pred             hhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchH
Confidence                                      24678999999999999999999999999999999999999986321    112


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        207 VRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ..+......|. ++...|||+|+.+.||++  +.+++|+.+.+|||+++
T Consensus       218 ~~~~~~~~~p~-~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        218 GYRNMFAKSPA-GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             HHHHHhhhCCc-ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence            22334445566 899999999999999997  47999999999999764

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-40  Score=271.59  Aligned_cols=232  Identities=28%  Similarity=0.427  Sum_probs=198.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+++.      ....++.+++||++|+++++++++++.+.++++|+
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD------DLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh------hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999998653      22356889999999999999999999999999999


Q ss_pred             EEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC-C
Q psy12833         82 NVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-G  158 (254)
Q Consensus        82 li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~-~  158 (254)
                      +|||||....  .++.+      .+.++|++.+++|+.+++.+++.++|.|.++.      .++||++||..+..+.+ +
T Consensus        81 vi~~ag~~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~ii~isS~~~~~~~~~~  148 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAA------LTDEEWQDELNLNLLAAVRLDRALLPGMIARG------SGVIIHVTSIQRRLPLPES  148 (260)
T ss_pred             EEECCcccccCCCCccc------CCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC------CcEEEEEecccccCCCCCC
Confidence            9999996431  22222      68899999999999999999999999998765      58999999999988865 7


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH-----------HHHHHH---HhcCCCCCCCCCH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE-----------KVRNFL---ARSIPAPQRLGHP  224 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~-----------~~~~~~---~~~~~~~~~~~~~  224 (254)
                      ...|+++|+++++++++++.|+.++||++++++||+++|++.....+           +..+.+   ....|. ++..+|
T Consensus       149 ~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~  227 (260)
T PRK06523        149 TTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL-GRPAEP  227 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc-CCCCCH
Confidence            88999999999999999999999999999999999999997643221           111111   123566 888999


Q ss_pred             HHHHHHHHHHhcC--CCcccceEEecCCcc
Q psy12833        225 DEFAQLVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       225 ~~va~~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      +|+|+.+.||+++  .+++|+.+.+|||+.
T Consensus       228 ~~va~~~~~l~s~~~~~~~G~~~~vdgg~~  257 (260)
T PRK06523        228 EEVAELIAFLASDRAASITGTEYVIDGGTV  257 (260)
T ss_pred             HHHHHHHHHHhCcccccccCceEEecCCcc
Confidence            9999999999974  699999999999974

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-40  Score=268.91  Aligned_cols=239  Identities=32%  Similarity=0.467  Sum_probs=211.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999888777666554   457889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|........+      .+.++++..++.|+.+++.+++.+.+.+.+++      .++++++||..+..+.+.
T Consensus        85 id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  152 (250)
T PRK12939         85 LDGLVNNAGITNSKSATE------LDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG------RGRIVNLASDTALWGAPK  152 (250)
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CeEEEEECchhhccCCCC
Confidence            999999999866544444      68899999999999999999999999998865      689999999999998888


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH-HHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE-KVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      ...|+++|++++++++.++.++...+++++.++||+++|++...... ...+.+....+. .++.+++|+|+.+++++++
T Consensus       153 ~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~  231 (250)
T PRK12939        153 LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRAL-ERLQVPDDVAGAVLFLLSD  231 (250)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCc
Confidence            89999999999999999999999999999999999999998765443 444445555566 7889999999999999964


Q ss_pred             --CCcccceEEecCCccc
Q psy12833        238 --PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~~  253 (254)
                        ++++|+.|.+|||+.|
T Consensus       232 ~~~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        232 AARFVTGQLLPVNGGFVM  249 (250)
T ss_pred             cccCccCcEEEECCCccc
Confidence              5899999999999876

>KOG1201|consensus

Probab=100.00  E-value=1.2e-40  Score=266.39  Aligned_cols=214  Identities=27%  Similarity=0.436  Sum_probs=194.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      .+|++||||||++|+||++|.+|+++|+++++.+.+.+..++..+++.  .+++.+.||+||++++.+..++++++.|.+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            468999999999999999999999999999999999998888887764  379999999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||+....++.+      .+.+.+++++++|+.++++++|+++|.|.+.+      +|+||.++|.+|..+.++.
T Consensus       116 ~ILVNNAGI~~~~~ll~------~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~------~GHIV~IaS~aG~~g~~gl  183 (300)
T KOG1201|consen  116 DILVNNAGIVTGKKLLD------CSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN------NGHIVTIASVAGLFGPAGL  183 (300)
T ss_pred             eEEEeccccccCCCccC------CCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC------CceEEEehhhhcccCCccc
Confidence            99999999988888777      89999999999999999999999999999988      8999999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhcc---CCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAG---AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ..|++||+|+.+|+++|..|+..   +||+...++|+.++|.|... .        ...|......+|+++|+.++..+.
T Consensus       184 ~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~-~--------~~~~~l~P~L~p~~va~~Iv~ai~  254 (300)
T KOG1201|consen  184 ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG-A--------TPFPTLAPLLEPEYVAKRIVEAIL  254 (300)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC-C--------CCCccccCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999954   57999999999999998864 1        112222556799999999998883

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-40  Score=269.22  Aligned_cols=238  Identities=26%  Similarity=0.370  Sum_probs=206.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.+.+++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988777766655   467889999999999999999999999999


Q ss_pred             CcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||.... .++.+      .+.+++++.+++|+.+++.+++++.+.|.+.       .++||++||..+..+.+
T Consensus        83 ~d~vi~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~~ii~~sS~~~~~~~~  149 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLAD------ADFAHWRAVIELNVLGTLRLTQAFTPALAES-------GGSIVMINSMVLRHSQP  149 (258)
T ss_pred             ccEEEECCccCCCCCCccc------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-------CCEEEEEechhhccCCC
Confidence            9999999997543 22223      6889999999999999999999999998765       37999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-----------hHHHHHHHHhcCCCCCCCCCHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  226 (254)
                      ++..|+++|++++.++++++.|++++||++++++||.+.|++....           .++..+.+.+..+. ++..+|+|
T Consensus       150 ~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d  228 (258)
T PRK07890        150 KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDL-KRLPTDDE  228 (258)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCc-cccCCHHH
Confidence            9999999999999999999999999999999999999999875421           12233334445566 78899999


Q ss_pred             HHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        227 FAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       227 va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++++++++++  ..+++|+++.+|||..+
T Consensus       229 va~a~~~l~~~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        229 VASAVLFLASDLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             HHHHHHHHcCHhhhCccCcEEEeCCcccc
Confidence            9999999997  36899999999999764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-40  Score=268.63  Aligned_cols=239  Identities=30%  Similarity=0.419  Sum_probs=206.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----C-CCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----G-PDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +|++|||||+++||++++++|+++|++|++++|+.+..++..+++    + .+++++.||++|++++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999987776665544    2 46889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|+..+++|+.+++++++.+.+.|.++..     .++||++||..+..+.+.
T Consensus        82 id~vv~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----~~~iv~~ss~~~~~~~~~  150 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITD------FQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI-----QGRIIQINSKSGKVGSKH  150 (259)
T ss_pred             CCEEEECCCcCCCCCccc------CCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC-----CcEEEEecCcccccCCCC
Confidence            999999999876554444      789999999999999999999999999976531     379999999988888888


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCc-cccccccc-----------hHHHHHHHHhcCCCCCCCCCHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF-DTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~-~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  226 (254)
                      ...|+++|+|+++++++++.|++++||+|++++||.+ .+++....           .++..+.+.+..|. ++..+++|
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d  229 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPL-KRGCDYQD  229 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcc-cCCCCHHH
Confidence            8899999999999999999999999999999999975 66654322           12333444556677 89999999


Q ss_pred             HHHHHHHHhc--CCCcccceEEecCCcccC
Q psy12833        227 FAQLVQSIIT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       227 va~~~~~l~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      +++.+.++++  ..+++|++|.+|||++++
T Consensus       230 v~~~~~~l~~~~~~~~~G~~~~v~~g~~~~  259 (259)
T PRK12384        230 VLNMLLFYASPKASYCTGQSINVTGGQVMF  259 (259)
T ss_pred             HHHHHHHHcCcccccccCceEEEcCCEEeC
Confidence            9999999997  357899999999999874

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-40  Score=268.32  Aligned_cols=244  Identities=30%  Similarity=0.432  Sum_probs=210.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||+++||++++++|+++|++|++++|+.++++++..++   +.++.++.+|++++++++++++++.+.+++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            56899999999999999999999999999999999988877776654   456889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC--CCCCCcEEEEEeccccccCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLN--EDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~~~~~~ii~vss~~~~~~~  156 (254)
                      +|++|||+|......+.+      .+.++++..+++|+.+++.+++++.+.|.++...  .....++++++||..+..+.
T Consensus        87 ~d~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  160 (258)
T PRK06949         87 IDILVNNSGVSTTQKLVD------VTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL  160 (258)
T ss_pred             CCEEEECCCCCCCCCccc------CCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC
Confidence            999999999765444333      6789999999999999999999999999876421  11224799999999999888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      +....|+++|++++.+++.++.++.++||++++++||+++|++..... ++......+.+|. ++...|+|+++.+.||+
T Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~l~  239 (258)
T PRK06949        161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPR-KRVGKPEDLDGLLLLLA  239 (258)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            888999999999999999999999999999999999999999865332 2223445556676 89999999999999999


Q ss_pred             c--CCCcccceEEecCCcc
Q psy12833        236 T--NPLINGEVIRIDGALR  252 (254)
Q Consensus       236 ~--~~~~~G~~i~~~gG~~  252 (254)
                      +  +.+++|+.|.+|||+.
T Consensus       240 ~~~~~~~~G~~i~~dgg~~  258 (258)
T PRK06949        240 ADESQFINGAIISADDGFG  258 (258)
T ss_pred             ChhhcCCCCcEEEeCCCCC
Confidence            7  4689999999999974

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.1e-40  Score=267.27  Aligned_cols=239  Identities=31%  Similarity=0.468  Sum_probs=209.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++++++|||||+++||++++++|+++|++|++++|+.+..++...++.  .++.+++||++|+++++++++++.+.++++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999999887777666553  568899999999999999999999999999


Q ss_pred             cEEEeCCccCCCc-cccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         80 DVNVNCAGISCAF-KIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        80 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      |++|||+|..... ++.+      .+.+++++.+++|+.+++.+++.+.+.+.++.      .++||++||..+..+.++
T Consensus        83 d~vi~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~  150 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLD------VDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG------GGAIVNVASTAGLRPRPG  150 (251)
T ss_pred             CEEEECCCCCCCCCChhh------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC------CcEEEEEcChhhcCCCCC
Confidence            9999999975432 2323      68899999999999999999999999998765      689999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH----HHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE----KVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ...|+.+|++++.+++.++.++++.||++++++||+++|++......    +..+.+....|. ++..+|+|+|+.++++
T Consensus       151 ~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l  229 (251)
T PRK07231        151 LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPL-GRLGTPEDIANAALFL  229 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998655432    333445556665 8889999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .+++|+.+.+|||.++
T Consensus       230 ~~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        230 ASDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             hCccccCCCCCeEEECCCccC
Confidence            964  5789999999999875

>KOG1207|consensus

Probab=100.00  E-value=1.4e-42  Score=254.81  Aligned_cols=236  Identities=24%  Similarity=0.334  Sum_probs=210.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |.|+.+++||+..|||++++++|++.|++|+.++|+++.++.+..+...-+..++.|+++.+.+.+++..+    +++|.
T Consensus         5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v----~pidg   80 (245)
T KOG1207|consen    5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV----FPIDG   80 (245)
T ss_pred             ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc----Cchhh
Confidence            57999999999999999999999999999999999999999999988777889999999977666665544    68999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      ++||||+....++.+      .+.+++.+.|++|+.+.+..+|.....+..+..     +|.|+++||.++.++..+...
T Consensus        81 LVNNAgvA~~~pf~e------iT~q~fDr~F~VNvravi~v~Q~var~lv~R~~-----~GaIVNvSSqas~R~~~nHtv  149 (245)
T KOG1207|consen   81 LVNNAGVATNHPFGE------ITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI-----KGAIVNVSSQASIRPLDNHTV  149 (245)
T ss_pred             hhccchhhhcchHHH------HhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC-----CceEEEecchhcccccCCceE
Confidence            999999987777776      899999999999999999999987666655432     689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      |+++|+|+++++|++|.|+.+++||||++.|..+.|+|-+..  ++.....+...+|. +|+-.++|+..+++||+++  
T Consensus       150 YcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl-~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  150 YCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPL-KRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             EeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCch-hhhhHHHHHHhhheeeeecCc
Confidence            999999999999999999999999999999999999986543  45555566777888 9999999999999999974  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      ...||.++.++|||+.
T Consensus       229 smttGstlpveGGfs~  244 (245)
T KOG1207|consen  229 SMTTGSTLPVEGGFSN  244 (245)
T ss_pred             CcccCceeeecCCccC
Confidence            6889999999999974

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=267.07  Aligned_cols=240  Identities=30%  Similarity=0.491  Sum_probs=206.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||+++||.+++++|+++|++|++++|+.++++...+++   +.++.+++||++|+++++++++++.+.+++
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999887766665544   457889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHH-HHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQL-IHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||+|.....+..+      .+.+.|++.+++|+.+++.+++++.+. +.+++      .++++++||..+..+.+
T Consensus        90 id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~------~~~~v~~sS~~~~~~~~  157 (259)
T PRK08213         90 VDILVNNAGATWGAPAED------HPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG------YGRIINVASVAGLGGNP  157 (259)
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC------CeEEEEECChhhccCCC
Confidence            999999999754443333      688999999999999999999999998 66554      57999999988776654


Q ss_pred             C----CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        158 G----QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       158 ~----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      +    ...|+++|++++.+++++++++.++||+++.++||+++|++.....+...+......|. .+...++|+|..+.+
T Consensus       158 ~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~  236 (259)
T PRK08213        158 PEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPL-GRLGDDEDLKGAALL  236 (259)
T ss_pred             ccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            3    48899999999999999999999999999999999999998665555544555556666 788899999999999


Q ss_pred             Hhc--CCCcccceEEecCCcccC
Q psy12833        234 IIT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      +++  +.+++|+.+.+|||+++.
T Consensus       237 l~~~~~~~~~G~~~~~~~~~~~~  259 (259)
T PRK08213        237 LASDASKHITGQILAVDGGVSAV  259 (259)
T ss_pred             HhCccccCccCCEEEECCCeecC
Confidence            996  468999999999998763

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=8.6e-40  Score=267.08  Aligned_cols=233  Identities=27%  Similarity=0.332  Sum_probs=202.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||+++||++++++|+++|++|++++|+.      ....+.++.++++|++|+++++++++++.+.++++|+
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999999999999999999999976      2223567889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||+|.....++.+      .+.+++++.+++|+.+++.+++.+.+.|.++.      .++|+++||..+..+.++...
T Consensus        80 vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~~ss~~~~~~~~~~~~  147 (252)
T PRK08220         80 LVNAAGILRMGATDS------LSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR------SGAIVTVGSNAAHVPRIGMAA  147 (252)
T ss_pred             EEECCCcCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC------CCEEEEECCchhccCCCCCch
Confidence            999999865544444      68899999999999999999999999998765      689999999999988888999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH----------HHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK----------VRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      |+++|++++.++++++.|+.++||+|++++||+++|++.......          ..+.+....|. +++.+|+|+|+++
T Consensus       148 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~  226 (252)
T PRK08220        148 YGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL-GKIARPQEIANAV  226 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCC-cccCCHHHHHHHH
Confidence            999999999999999999999999999999999999975432110          11233344555 8899999999999


Q ss_pred             HHHhc--CCCcccceEEecCCccc
Q psy12833        232 QSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       232 ~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++|++  ..+++|+++.+|||++|
T Consensus       227 ~~l~~~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        227 LFLASDLASHITLQDIVVDGGATL  250 (252)
T ss_pred             HHHhcchhcCccCcEEEECCCeec
Confidence            99997  46999999999999876

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.3e-39  Score=265.58  Aligned_cols=239  Identities=34%  Similarity=0.536  Sum_probs=209.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||+++||++++++|+++|++|++++|+.+..+++.+++   +.++.++++|++|.++++++++.+.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988776665543   467889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++.+      .+.+++++.+++|+.+++++++.+.+.|.+++      .++|+++||..+..+.++
T Consensus        81 ~d~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~ii~iss~~~~~~~~~  148 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTK------TEPPLWERLIAINLTGALHMHHAVLPGMVERG------AGRIVNIASDAARVGSSG  148 (250)
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CeEEEEECchhhccCCCC
Confidence            999999999765444444      68889999999999999999999999998765      689999999999999899


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch------HHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      ...|+.+|++++.++++++.++.+.+++++.++||.++|++.....      ......+....|. ++..+++|+|+.+.
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~  227 (250)
T TIGR03206       149 EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL-GRLGQPDDLPGAIL  227 (250)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc-cCCcCHHHHHHHHH
Confidence            9999999999999999999999989999999999999999764321      2233445556666 88899999999999


Q ss_pred             HHhc--CCCcccceEEecCCccc
Q psy12833        233 SIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++++  ..+++|+++.+|||+++
T Consensus       228 ~l~~~~~~~~~g~~~~~~~g~~~  250 (250)
T TIGR03206       228 FFSSDDASFITGQVLSVSGGLTM  250 (250)
T ss_pred             HHcCcccCCCcCcEEEeCCCccC
Confidence            9997  36899999999999875

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-39  Score=267.71  Aligned_cols=238  Identities=29%  Similarity=0.426  Sum_probs=201.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.. +..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999999999999999988765 444433   567899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|......+.       ...++++..+++|+.+++.+++.+.|.+.+.       .++|+++||..+..+.++
T Consensus        84 id~vi~~ag~~~~~~~~-------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~~  149 (258)
T PRK08628         84 IDGLVNNAGVNDGVGLE-------AGREAFVASLERNLIHYYVMAHYCLPHLKAS-------RGAIVNISSKTALTGQGG  149 (258)
T ss_pred             CCEEEECCcccCCCccc-------CCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-------CcEEEEECCHHhccCCCC
Confidence            99999999975433322       2348999999999999999999999988754       479999999999999889


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch------HHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      +..|+++|+++++++++++.|+.++||+++.|+||.++|++.....      ........+..+...+..+|+|+|+.+.
T Consensus       150 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  229 (258)
T PRK08628        150 TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAV  229 (258)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999754311      1122233334454247889999999999


Q ss_pred             HHhcC--CCcccceEEecCCcccC
Q psy12833        233 SIITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      +++++  .+++|+.+.+|||++++
T Consensus       230 ~l~~~~~~~~~g~~~~~~gg~~~~  253 (258)
T PRK08628        230 FLLSERSSHTTGQWLFVDGGYVHL  253 (258)
T ss_pred             HHhChhhccccCceEEecCCcccc
Confidence            99964  68999999999998764

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.2e-39  Score=266.89  Aligned_cols=239  Identities=25%  Similarity=0.365  Sum_probs=198.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     ...+.+++||++|++++.++++++.+.
T Consensus         1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999999988877766655     234567899999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++||||+.......   ....+.+.+.+.+.+++|+.+++.+++.++|.|.++.      .++||++||..+..+
T Consensus        81 ~~~id~vi~~A~~~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~  151 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYG---KKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG------GGNLVNISSIYGVVA  151 (256)
T ss_pred             cCCccEEEECCcccccccc---CccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC------CceEEEEechhhhcc
Confidence            9999999999975432110   1122378899999999999999999999999998765      579999999876543


Q ss_pred             C----------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHH
Q psy12833        156 Q----------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       156 ~----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (254)
                      .          .....|+++|+++++++++++.|+.++||+++.++||.+.++...    ...+.+....+. ++..+|+
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~----~~~~~~~~~~~~-~~~~~~~  226 (256)
T PRK09186        152 PKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE----AFLNAYKKCCNG-KGMLDPD  226 (256)
T ss_pred             ccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH----HHHHHHHhcCCc-cCCCCHH
Confidence            1          122369999999999999999999999999999999999876532    222333334444 7789999


Q ss_pred             HHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        226 EFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       226 ~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |+|+.++++++  +.+++|+.+.+|||+++
T Consensus       227 dva~~~~~l~~~~~~~~~g~~~~~~~g~~~  256 (256)
T PRK09186        227 DICGTLVFLLSDQSKYITGQNIIVDDGFSL  256 (256)
T ss_pred             HhhhhHhheeccccccccCceEEecCCccC
Confidence            99999999996  35899999999999864

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=2e-39  Score=265.26  Aligned_cols=237  Identities=32%  Similarity=0.487  Sum_probs=206.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+++||||+++||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|++++.++++++.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999877776665554   556889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||+|.....++.+      .+.+++++.+++|+.+++.+++.+++.|.+.+.     .++++++||..+..+.+....
T Consensus        81 vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~  149 (254)
T TIGR02415        81 MVNNAGVAPITPILE------ITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH-----GGKIINAASIAGHEGNPILSA  149 (254)
T ss_pred             EEECCCcCCCCCccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-----CeEEEEecchhhcCCCCCCcc
Confidence            999999865544444      789999999999999999999999999987541     379999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH-----------HHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-----------VRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      |+.+|+++++|++.++.|+.+.||+|++++||+++|++++...+.           ..+.+....+. ++..+|+|+++.
T Consensus       150 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~  228 (254)
T TIGR02415       150 YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIAL-GRPSEPEDVAGL  228 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCC-CCCCCHHHHHHH
Confidence            999999999999999999999999999999999999986543321           12233445666 889999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +.+|+++  .+++|+++.+|||+.+
T Consensus       229 ~~~l~~~~~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       229 VSFLASEDSDYITGQSILVDGGMVY  253 (254)
T ss_pred             HHhhcccccCCccCcEEEecCCccC
Confidence            9999974  5889999999999864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=266.43  Aligned_cols=238  Identities=26%  Similarity=0.388  Sum_probs=202.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999987776655444   456788999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++.+      .+.+++++.+++|+.+++++++++.|.+.++       .++|+++||..+..+.++
T Consensus        87 iD~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-------~g~iv~iss~~~~~~~~~  153 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAG------MSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-------GASIIQISAPQAFVPMPM  153 (264)
T ss_pred             CCEEEECCCCCCCCcccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-------CCEEEEECChhhccCCCC
Confidence            999999998654444433      7889999999999999999999999998754       479999999998888888


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcc-ccccccc-h-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFD-TPLLSML-N-EKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~-t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      +..|+++|+++++|+++++.|+.++||++++++||.++ |+..... . +.....+....|. ++...|+|+|+.+++++
T Consensus       154 ~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  232 (264)
T PRK07576        154 QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPL-KRNGTKQDIANAALFLA  232 (264)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999997 5533221 1 2222334444565 88899999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .+++|+.+.+|||+++
T Consensus       233 ~~~~~~~~G~~~~~~gg~~~  252 (264)
T PRK07576        233 SDMASYITGVVLPVDGGWSL  252 (264)
T ss_pred             ChhhcCccCCEEEECCCccc
Confidence            74  6899999999999763

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=3.3e-39  Score=261.34  Aligned_cols=229  Identities=29%  Similarity=0.426  Sum_probs=191.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC-CchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP-TSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+ .+..+++.++.  .+.++.+|++|.+++.+++++    ++++|
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~--~~~~~~~D~~~~~~~~~~~~~----~~~id   77 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET--GATAVQTDSADRDAVIDVVRK----SGALD   77 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh--CCeEEecCCCCHHHHHHHHHH----hCCCc
Confidence            568999999999999999999999999999887764 44555554544  367889999999988877753    47899


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCCCCC
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQSGQ  159 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~~~~  159 (254)
                      ++|||+|........+      .+.++|++.+++|+.+++.+++.+.+.|.+        .++||++||..+. .+.++.
T Consensus        78 ~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~  143 (237)
T PRK12742         78 ILVVNAGIAVFGDALE------LDADDIDRLFKINIHAPYHASVEAARQMPE--------GGRIIIIGSVNGDRMPVAGM  143 (237)
T ss_pred             EEEECCCCCCCCCccc------CCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--------CCeEEEEeccccccCCCCCC
Confidence            9999999764433333      688999999999999999999999998853        4799999998874 577888


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--C
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--N  237 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~  237 (254)
                      ..|+.+|++++.+++.++.++.++||+|++|+||+++|++.....+ ..+......|. +++.+|+|+++.+.||++  +
T Consensus       144 ~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~~~~~~~~-~~~~~p~~~a~~~~~l~s~~~  221 (237)
T PRK12742        144 AAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-MKDMMHSFMAI-KRHGRPEEVAGMVAWLAGPEA  221 (237)
T ss_pred             cchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-HHHHHHhcCCC-CCCCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999999998654322 23344445566 889999999999999997  4


Q ss_pred             CCcccceEEecCCcc
Q psy12833        238 PLINGEVIRIDGALR  252 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~  252 (254)
                      .+++|+.+.+|||++
T Consensus       222 ~~~~G~~~~~dgg~~  236 (237)
T PRK12742        222 SFVTGAMHTIDGAFG  236 (237)
T ss_pred             CcccCCEEEeCCCcC
Confidence            689999999999975

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.3e-39  Score=266.96  Aligned_cols=247  Identities=23%  Similarity=0.308  Sum_probs=193.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC-CchhHHHHHHh----CCCceEEecCCCCHHHH----HHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLP-TSEGESVAKEL----GPDVKFAPVDVTSEEDV----QKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~----~~~~~~~~~Dls~~~~~----~~~~~~~~~~   75 (254)
                      ++++||||++|||++++++|+++|++|++++|+ .+.++.+.+++    +.++.++++|++|++++    +++++.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999987764 45666655554    24567899999999865    5566666677


Q ss_pred             cCCCcEEEeCCccCCCccccccCC-----CCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNK-----GTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      ++++|++|||||.....++.+...     ......+++.+.+++|+.+++.+++.+.+.|...........++|++++|.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence            889999999999765444332110     001122468899999999999999999999865432112225789999999


Q ss_pred             ccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        151 AAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      .+..+.+++..|+++|+|+++|+++++.|+.++||+|++|+||+++++...  ..+..+.+....|...+..+|+|+++.
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~  239 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM--PFEVQEDYRRKVPLGQREASAEQIADV  239 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc--chhHHHHHHHhCCCCcCCCCHHHHHHH
Confidence            999998999999999999999999999999999999999999999776321  122223333445552477899999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++++++.  .+++|+.+.+|||+++
T Consensus       240 ~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       240 VIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             HHHHhCcccCCcccceEEECCceec
Confidence            9999974  6899999999999875

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.2e-39  Score=261.34  Aligned_cols=239  Identities=36%  Similarity=0.559  Sum_probs=205.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|+++||||++|||++++++|+++|++|++..+ +.+..++..+++   +.++.++.+|++|++++.++++++.+.++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999987655 444555544443   45688999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||......+.+      .+.+++++.+++|+.+++.+++.++|.+.++.      .++++++||..+..+.+
T Consensus        84 ~id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~  151 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKK------LNREDWERVIDVNLSSVFNTTSAVLPYITEAE------EGRIISISSIIGQAGGF  151 (247)
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEEcchhhcCCCC
Confidence            9999999999865443333      68899999999999999999999999998765      67999999999988888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      ++..|+++|+++++++++++.++.+.|++++.++||.++|++.....+..........+. +++.+|||++++++++++ 
T Consensus       152 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~edva~~~~~~~~~  230 (247)
T PRK12935        152 GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPK-KRFGQADEIAKGVVYLCRD  230 (247)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCC-CCCcCHHHHHHHHHHHcCc
Confidence            899999999999999999999999999999999999999998766555444455555555 788999999999999996 


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      ..+++|+.+++|||+.+
T Consensus       231 ~~~~~g~~~~i~~g~~~  247 (247)
T PRK12935        231 GAYITGQQLNINGGLYM  247 (247)
T ss_pred             ccCccCCEEEeCCCccC
Confidence            45789999999999754

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.8e-39  Score=261.70  Aligned_cols=245  Identities=39%  Similarity=0.584  Sum_probs=208.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++++++||||+++|||+++++.|+++|++|++++|+.+++++..+++   +.++.++++|++|+++++++++.+.+.+++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999987776665554   557889999999999999999999998899


Q ss_pred             CcEEEeCCccCCCcccccc--CCC-CcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         79 LDVNVNCAGISCAFKIFNY--NKG-TVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~--~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +|++|||+|......+...  ... .+.+.++++..+++|+.+++.+++.+.+.+.++..     .+.|+++||.. ..+
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-----~~~iv~~ss~~-~~~  156 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS-----KGVIINISSIA-RAG  156 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-----CeEEEEEcccc-ccC
Confidence            9999999997543222110  111 34688999999999999999999999999976531     47899998875 456


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      .++...|+++|+++++++++++.++.++||++++++||+++|++.....+...+.+....|. ++..+++|+|+.+.+++
T Consensus       157 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~  235 (253)
T PRK08217        157 NMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPV-GRLGEPEEIAHTVRFII  235 (253)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCc-CCCcCHHHHHHHHHHHH
Confidence            67788999999999999999999999999999999999999998876666666666666666 78899999999999999


Q ss_pred             cCCCcccceEEecCCccc
Q psy12833        236 TNPLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~~~~~G~~i~~~gG~~~  253 (254)
                      ++.+++|++|++|||.+|
T Consensus       236 ~~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        236 ENDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             cCCCcCCcEEEeCCCccC
Confidence            888899999999999875

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-39  Score=262.22  Aligned_cols=239  Identities=36%  Similarity=0.525  Sum_probs=206.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++|+++||||+++||++++++|+++|++|++++|+.+..++..+++  +.++.+++||++|+++++++++++.+.++++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999988777666655  5568899999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||+|......+.+      .+.+++++.+++|+.+++.+++.+++.|.+++      .++|+++||..+..+.++.
T Consensus        83 d~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~ii~~sS~~~~~~~~~~  150 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVT------TDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG------GGSIVNTASQLALAGGRGR  150 (252)
T ss_pred             CEEEECCCCCCCCCccc------CCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC------CeEEEEECChhhccCCCCc
Confidence            99999999765544433      68899999999999999999999999998765      6899999999998888888


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----H-HHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----E-KVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      ..|+.+|++++.++++++.|+...|+++++++||.+.|++.....     + ..........+. +++.+++|+++.+++
T Consensus       151 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~  229 (252)
T PRK06138        151 AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPM-NRFGTAEEVAQAALF  229 (252)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999998764321     1 112222223344 568899999999999


Q ss_pred             HhcC--CCcccceEEecCCccc
Q psy12833        234 IITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++++  ++.+|+.+.+|||.+.
T Consensus       230 l~~~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        230 LASDESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             HcCchhcCccCCEEEECCCeec
Confidence            9964  5889999999999764

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-39  Score=263.61  Aligned_cols=238  Identities=26%  Similarity=0.415  Sum_probs=206.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++++++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++.+|++|++++.++++++.+.+++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999987777666554   457889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||......+.+      .+.+++++.+++|+.+++.+++++.+.|.+...     .++|+++||..+..+.++
T Consensus        88 id~vi~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~  156 (263)
T PRK07814         88 LDIVVNNVGGTMPNPLLS------TSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-----GGSVINISSTMGRLAGRG  156 (263)
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-----CeEEEEEccccccCCCCC
Confidence            999999999765444444      788999999999999999999999999987321     589999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ...|+++|+++++++++++.|+.+ +|++++++||+++|++....  .++..+.+....+. .+..+++|+|+.++++++
T Consensus       157 ~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~  234 (263)
T PRK07814        157 FAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPL-RRLGDPEDIAAAAVYLAS  234 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999987 69999999999999876432  23334444445565 778899999999999997


Q ss_pred             C--CCcccceEEecCCcc
Q psy12833        237 N--PLINGEVIRIDGALR  252 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~  252 (254)
                      +  .+++|+.+.+|||..
T Consensus       235 ~~~~~~~g~~~~~~~~~~  252 (263)
T PRK07814        235 PAGSYLTGKTLEVDGGLT  252 (263)
T ss_pred             ccccCcCCCEEEECCCcc
Confidence            4  689999999999965

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.3e-39  Score=263.16  Aligned_cols=235  Identities=24%  Similarity=0.389  Sum_probs=199.7

Q ss_pred             CCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCC-----------chhHHHHHH---hCCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPT-----------SEGESVAKE---LGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~-----------~~~~~~~~~---~~~~~~~~~~Dls~~~~~   65 (254)
                      +++|++|||||++  |||++++++|+++|++|++++|+.           .....+.++   .+.+++++++|++|++++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5789999999994  999999999999999999999872           221112222   356789999999999999


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEE
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVII  145 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii  145 (254)
                      .++++++.+.++++|++|||||.....++.+      .+.+++++.+++|+.+++.+++++.+.|.++.      .++|+
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv  150 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEE------LTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA------GGRII  150 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC------CeEEE
Confidence            9999999999999999999999765444444      68899999999999999999999999987654      58999


Q ss_pred             EEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHH
Q psy12833        146 NTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       146 ~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (254)
                      ++||..+..+.++...|+++|+++++++++++.|+...||+|++++||+++|++..   +...+......+. .+..+|+
T Consensus       151 ~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~---~~~~~~~~~~~~~-~~~~~~~  226 (256)
T PRK12748        151 NLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT---EELKHHLVPKFPQ-GRVGEPV  226 (256)
T ss_pred             EECCccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC---hhHHHhhhccCCC-CCCcCHH
Confidence            99999998888888999999999999999999999999999999999999998653   2222333344454 7788999


Q ss_pred             HHHHHHHHHhcC--CCcccceEEecCCcc
Q psy12833        226 EFAQLVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       226 ~va~~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      |+|+.+.+++++  .+++|+++.+|||++
T Consensus       227 ~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        227 DAARLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHHHHHHHhCcccccccCCEEEecCCcc
Confidence            999999999974  678999999999975

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-39  Score=262.89  Aligned_cols=240  Identities=30%  Similarity=0.491  Sum_probs=208.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ||++|++|||||+++||++++++|+++|++|++++|+.+..++..+++   +.+++++.||++|+++++++++++.+.++
T Consensus         1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            789999999999999999999999999999999999988777766655   56788999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||+|........+      .+.++++..+++|+.+++.+++.+++.|.+++      .++|+++||..+..+.+
T Consensus        81 ~~d~vi~~a~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~iss~~~~~~~~  148 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIED------FPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG------GGRIINMASVHGLVGSA  148 (258)
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC------CeEEEEEcchhhccCCC
Confidence            9999999999765544444      68899999999999999999999999998876      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH------------HHHHHHHhcCCCCCCCCCHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE------------KVRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~  225 (254)
                      +...|+++|++++++++.++.|+.+.+|+++.++||+++|++.....+            ...+.+....+. +++++++
T Consensus       149 ~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  227 (258)
T PRK12429        149 GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQ-KRFTTVE  227 (258)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCc-cccCCHH
Confidence            999999999999999999999999999999999999999987643211            111122233344 7889999


Q ss_pred             HHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        226 EFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       226 ~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+|+.+.+++++  ..++|+.+.+|||+++
T Consensus       228 d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        228 EIADYALFLASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             HHHHHHHHHcCccccCccCCeEEeCCCEec
Confidence            999999999964  5789999999999875

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-39  Score=260.92  Aligned_cols=236  Identities=31%  Similarity=0.460  Sum_probs=203.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++++|+++||||++|||++++++|+++|++|+++.|+.+ ..++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999998887654 333333333   5678999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||+|.....++.+      .+.+++++.+++|+.+++.+++.+++.|.+        .++|+++||..+..+.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~  147 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIAD------FDLEDFDRTIATNLRGAFVVLREAARHLGQ--------GGRIINLSTSVIALPL  147 (245)
T ss_pred             CCCCEEEECCCCCCCCChhh------CCHHHHHHHHhhhchHHHHHHHHHHHHhcc--------CcEEEEEeeccccCCC
Confidence            99999999999765444433      688999999999999999999999998854        4799999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-chHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-LNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      +++..|+.+|++++.++++++.|+.+.|++++.++||+++|++... ..++..+.+.+..|. ++..+++|+++.+.+++
T Consensus       148 ~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~  226 (245)
T PRK12937        148 PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPL-ERLGTPEEIAAAVAFLA  226 (245)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999999998532 233444555566676 88899999999999999


Q ss_pred             cC--CCcccceEEecCCc
Q psy12833        236 TN--PLINGEVIRIDGAL  251 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~  251 (254)
                      +.  .+++|+++.+|||+
T Consensus       227 ~~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        227 GPDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             CccccCccccEEEeCCCC
Confidence            74  58999999999986

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-39  Score=266.31  Aligned_cols=237  Identities=30%  Similarity=0.487  Sum_probs=202.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+. .+...+.+   +.++.++.||++|.++++++++++.+.++
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999998643 33333333   45688999999999999999999999999


Q ss_pred             CCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      ++|++|||||.... ..+.+      .+.++|++.+++|+.+++.+++++.+.|.+        .++||++||..+..+.
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--------~g~iV~isS~~~~~~~  189 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLED------ITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--------GSAIINTGSITGYEGN  189 (290)
T ss_pred             CCCEEEECCcccCCCCCccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--------CCeEEEEecccccCCC
Confidence            99999999997543 22333      788999999999999999999999998854        4789999999999998


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      +....|+++|+|++.++++++.++.++||++++++||+++|++.... .++..+.+....+. +++.+++|+|+.+++|+
T Consensus       190 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~ll  268 (290)
T PRK06701        190 ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPM-QRPGQPEELAPAYVFLA  268 (290)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCc-CCCcCHHHHHHHHHHHc
Confidence            88899999999999999999999999999999999999999976432 22333344455566 88899999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .+++|+++.+|||..+
T Consensus       269 ~~~~~~~~G~~i~idgg~~~  288 (290)
T PRK06701        269 SPDSSYITGQMLHVNGGVIV  288 (290)
T ss_pred             CcccCCccCcEEEeCCCccc
Confidence            74  6899999999999753

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.6e-39  Score=266.33  Aligned_cols=233  Identities=19%  Similarity=0.244  Sum_probs=196.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHH----cCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          6 VGLVTGGASGLGKATVERIVR----EGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~----~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++||||++|||++++++|++    +|++|++++|+.+.++++.+++     +.++.++++|++|+++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999988888777665     2357889999999999999999998877


Q ss_pred             CCC----cEEEeCCccCCCcc-ccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         77 GKL----DVNVNCAGISCAFK-IFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        77 ~~i----d~li~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      +++    |++|||||...... ....    ..+.+++++.+++|+.+++.+++.++|.|.++..    ..++|+++||..
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~----~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~----~~~~iv~isS~~  153 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVD----LSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG----LNRTVVNISSLC  153 (256)
T ss_pred             ccCCCceEEEEeCCcccCcccccccc----CCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC----CCCEEEEECCHH
Confidence            643    69999999753321 1110    0257899999999999999999999999986421    147999999999


Q ss_pred             cccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----HHHHHHHHhcCCCCCCCCCHHH
Q psy12833        152 AYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----EKVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       152 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  226 (254)
                      +..+.+++..|+++|+|+++|+++++.|++++||+|++++||+++|++.....     ++..+.+....|. +++.+|+|
T Consensus       154 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~e  232 (256)
T TIGR01500       154 AIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAK-GKLVDPKV  232 (256)
T ss_pred             hCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhc-CCCCCHHH
Confidence            99999999999999999999999999999999999999999999999875432     2333445556677 88999999


Q ss_pred             HHHHHHHHhc-CCCcccceEEe
Q psy12833        227 FAQLVQSIIT-NPLINGEVIRI  247 (254)
Q Consensus       227 va~~~~~l~~-~~~~~G~~i~~  247 (254)
                      +|+.++++++ ++++||++++.
T Consensus       233 va~~~~~l~~~~~~~~G~~~~~  254 (256)
T TIGR01500       233 SAQKLLSLLEKDKFKSGAHVDY  254 (256)
T ss_pred             HHHHHHHHHhcCCcCCcceeec
Confidence            9999999995 68999999985

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.2e-39  Score=260.80  Aligned_cols=236  Identities=32%  Similarity=0.502  Sum_probs=206.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |+++||||+++||++++++|+++|++|++++|+.. ..++...+.   +.++.++++|++|++++.++++++.+.++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999999999854 222232222   35688999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|......+.+      .+.+++++.+++|+.+++++++.+++.+.+..      .++||++||..+..+.++..
T Consensus        83 ~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~iss~~~~~~~~~~~  150 (245)
T PRK12824         83 ILVNNAGITRDSVFKR------MSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG------YGRIINISSVNGLKGQFGQT  150 (245)
T ss_pred             EEEECCCCCCCCcccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC------CeEEEEECChhhccCCCCCh
Confidence            9999999865444444      78999999999999999999999999998765      68999999999999988999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CC
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NP  238 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~  238 (254)
                      .|+++|+++++++++++.++.+.|++++.++||+++|++.....+...+.+....|. ++..+++|+++.+.++++  +.
T Consensus       151 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~  229 (245)
T PRK12824        151 NYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPM-KRLGTPEEIAAAVAFLVSEAAG  229 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCcccc
Confidence            999999999999999999999999999999999999998766555555555666666 788899999999999996  46


Q ss_pred             CcccceEEecCCccc
Q psy12833        239 LINGEVIRIDGALRM  253 (254)
Q Consensus       239 ~~~G~~i~~~gG~~~  253 (254)
                      +++|+.+.+|||+.|
T Consensus       230 ~~~G~~~~~~~g~~~  244 (245)
T PRK12824        230 FITGETISINGGLYM  244 (245)
T ss_pred             CccCcEEEECCCeec
Confidence            899999999999976

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-39  Score=260.11  Aligned_cols=218  Identities=21%  Similarity=0.255  Sum_probs=186.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC-
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG-   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-   77 (254)
                      ++||+++||||++|||++++++|+++|++|++++|+++.+++..+++   +.++..++||++|+++++++++++.++++ 
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999999999999998887776654   55678899999999999999999999998 


Q ss_pred             CCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      ++|++|||+|.... .++.+      .+.+++.+.+++|+.+++.+++.++|+|.++..     .|+||++||..+.   
T Consensus        83 ~iD~li~nag~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~-----~g~Iv~isS~~~~---  148 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDE------QPSESFIQQLSSLASTLFTYGQVAAERMRKRNK-----KGVIVNVISHDDH---  148 (227)
T ss_pred             CCCEEEECCccCCCCCcccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CceEEEEecCCCC---
Confidence            99999999985432 23333      788999999999999999999999999986531     4899999997644   


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      +++..|+++|+|+.+|+++++.|++++||+||+|+||+++|+...  .++.++..            .||++.+..||++
T Consensus       149 ~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~--~~~~~~~~------------~~~~~~~~~~l~~  214 (227)
T PRK08862        149 QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL--DAVHWAEI------------QDELIRNTEYIVA  214 (227)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc--CHHHHHHH------------HHHHHhheeEEEe
Confidence            457789999999999999999999999999999999999998421  12212211            1899999999999


Q ss_pred             CCCcccceEEe
Q psy12833        237 NPLINGEVIRI  247 (254)
Q Consensus       237 ~~~~~G~~i~~  247 (254)
                      +++++|+.+..
T Consensus       215 ~~~~tg~~~~~  225 (227)
T PRK08862        215 NEYFSGRVVEA  225 (227)
T ss_pred             cccccceEEee
Confidence            99999998864

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.8e-39  Score=289.82  Aligned_cols=239  Identities=33%  Similarity=0.532  Sum_probs=209.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .++|++|||||++|||++++++|+++|++|++++|+.+++++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            46899999999999999999999999999999999999888888888778889999999999999999999999999999


Q ss_pred             EEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCc-EEEEEeccccccCCCC
Q psy12833         82 NVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRG-VIINTASIAAYEGQSG  158 (254)
Q Consensus        82 li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~-~ii~vss~~~~~~~~~  158 (254)
                      +|||||....  .++.+      .+.++|++.+++|+.+++.++++++|.|.+++      .+ +||++||..+..+.+.
T Consensus        83 li~nag~~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~~iv~isS~~~~~~~~~  150 (520)
T PRK06484         83 LVNNAGVTDPTMTATLD------TTLEEFARLQAINLTGAYLVAREALRLMIEQG------HGAAIVNVASGAGLVALPK  150 (520)
T ss_pred             EEECCCcCCCCCccccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CCCeEEEECCcccCCCCCC
Confidence            9999997432  22223      78999999999999999999999999998754      44 9999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH---HHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK---VRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ...|+++|+++.+|+++++.|+.+.||+|++++||+++|++.......   ..+......|. ++..+|+|+|+.+.+++
T Consensus       151 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~v~~l~  229 (520)
T PRK06484        151 RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPL-GRLGRPEEIAEAVFFLA  229 (520)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999986543211   12223345565 77889999999999999


Q ss_pred             c--CCCcccceEEecCCccc
Q psy12833        236 T--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~--~~~~~G~~i~~~gG~~~  253 (254)
                      +  +.+++|+++.+|||++.
T Consensus       230 ~~~~~~~~G~~~~~~gg~~~  249 (520)
T PRK06484        230 SDQASYITGSTLVVDGGWTV  249 (520)
T ss_pred             CccccCccCceEEecCCeec
Confidence            7  46899999999999753

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.4e-38  Score=258.27  Aligned_cols=236  Identities=33%  Similarity=0.501  Sum_probs=205.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |++|||||+++||++++++|+++|++|+++.| +.+..++..++.   +.++.++.+|++|++++.++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999888 444444444333   45788999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|......+.+      .+.+++++.+++|+.+++.+++.+++.|.+..      .++|+++||..+..+.+++.
T Consensus        81 ~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~iss~~~~~~~~~~~  148 (242)
T TIGR01829        81 VLVNNAGITRDATFKK------MTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG------WGRIINISSVNGQKGQFGQT  148 (242)
T ss_pred             EEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEEcchhhcCCCCCcc
Confidence            9999999765444433      78899999999999999999999999998765      58999999999998888899


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--C
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--P  238 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~  238 (254)
                      .|+++|+++..+++.++.++.+.|+++++++||+++|++.....+.....+....|. .+...|+|+++.+.+++++  .
T Consensus       149 ~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~  227 (242)
T TIGR01829       149 NYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPV-GRLGRPEEIAAAVAFLASEEAG  227 (242)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhc
Confidence            999999999999999999999999999999999999998766555555555555666 7889999999999999964  5


Q ss_pred             CcccceEEecCCccc
Q psy12833        239 LINGEVIRIDGALRM  253 (254)
Q Consensus       239 ~~~G~~i~~~gG~~~  253 (254)
                      +++|+.|.+|||++|
T Consensus       228 ~~~G~~~~~~gg~~~  242 (242)
T TIGR01829       228 YITGATLSINGGLYM  242 (242)
T ss_pred             CccCCEEEecCCccC
Confidence            899999999999875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=9.1e-39  Score=259.11  Aligned_cols=231  Identities=29%  Similarity=0.459  Sum_probs=198.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++||||++|||++++++|+++|++|++++|+. +.++...+++   +.++.++++|++|++++.++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999988754 4445544443   5678999999999999999999999999999999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHH-HHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA-QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      |||+|.....++.+      .+.++++..+++|+.+++++++.++ |.+.+++      .++||++||..+..+.++...
T Consensus        81 i~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~~~iv~vsS~~~~~~~~~~~~  148 (239)
T TIGR01831        81 VLNAGITRDAAFPA------LSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ------GGRIITLASVSGVMGNRGQVN  148 (239)
T ss_pred             EECCCCCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC------CeEEEEEcchhhccCCCCCcc
Confidence            99999865544433      6889999999999999999999875 5444443      589999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |+++|+++++++++++.|+.++||+++.++||+++|++.....+. .+...+..|. ++..+|+|+++.++||++  +.+
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~  226 (239)
T TIGR01831       149 YSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD-LDEALKTVPM-NRMGQPAEVASLAGFLMSDGASY  226 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH-HHHHHhcCCC-CCCCCHHHHHHHHHHHcCchhcC
Confidence            999999999999999999999999999999999999987654433 2334456677 889999999999999997  479


Q ss_pred             cccceEEecCCc
Q psy12833        240 INGEVIRIDGAL  251 (254)
Q Consensus       240 ~~G~~i~~~gG~  251 (254)
                      ++|+.+.+|||+
T Consensus       227 ~~g~~~~~~gg~  238 (239)
T TIGR01831       227 VTRQVISVNGGM  238 (239)
T ss_pred             ccCCEEEecCCc
Confidence            999999999995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-38  Score=260.15  Aligned_cols=238  Identities=33%  Similarity=0.529  Sum_probs=200.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||+++||||++|||++++++|+++|++|++++|+....++..+++.  ..+++||++|+++++++++++.+.++++|+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--GLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--CcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999998877776666553  368899999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-CCCc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-SGQV  160 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-~~~~  160 (254)
                      +|||||......    ....+.+.+.+++.+++|+.+++++++.++|.|.++.      .++|+++||..+..+. ++..
T Consensus        83 vi~~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~g~iv~~sS~~~~~g~~~~~~  152 (255)
T PRK06057         83 AFNNAGISPPED----DSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG------KGSIINTASFVAVMGSATSQI  152 (255)
T ss_pred             EEECCCcCCCCC----CCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC------CcEEEEEcchhhccCCCCCCc
Confidence            999999753211    1122368899999999999999999999999998765      6899999998776655 4677


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      .|+++|++++++++.++.++.++||++++++||+++|++.....   ++.........|. +++.+|+|+++.+.++++ 
T Consensus       153 ~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~  231 (255)
T PRK06057        153 SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPM-GRFAEPEEIAAAVAFLASD  231 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            89999999999999999999999999999999999999764321   1211222234555 788999999999999996 


Q ss_pred             -CCCcccceEEecCCcc
Q psy12833        237 -NPLINGEVIRIDGALR  252 (254)
Q Consensus       237 -~~~~~G~~i~~~gG~~  252 (254)
                       +.+++|+.+.+|||++
T Consensus       232 ~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        232 DASFITASTFLVDGGIS  248 (255)
T ss_pred             cccCccCcEEEECCCee
Confidence             4699999999999975

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-38  Score=260.09  Aligned_cols=239  Identities=26%  Similarity=0.429  Sum_probs=203.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||+++||++++++|+++|++|++++|+++..++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999999999999999988777666554   456888999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHH-HhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLI-HENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||+|......+.+      .+.++++..+++|+.+++.+++.+++.+ .+..      .++||++||..+..+.+
T Consensus        85 ~d~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~------~~~iv~~ss~~~~~~~~  152 (262)
T PRK13394         85 VDILVSNAGIQIVNPIEN------YSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR------GGVVIYMGSVHSHEASP  152 (262)
T ss_pred             CCEEEECCccCCCCchhh------CCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC------CcEEEEEcchhhcCCCC
Confidence            999999999865444434      6789999999999999999999999999 5544      58999999999988888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH------------HHHHHHhcCCCCCCCCCHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK------------VRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~  225 (254)
                      +...|+++|++++++++.++.++.+.+|+++.++||.++|++.....+.            ....+....+. +++.+++
T Consensus       153 ~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  231 (262)
T PRK13394        153 LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVD-GVFTTVE  231 (262)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCC-CCCCCHH
Confidence            8889999999999999999999999999999999999999875332111            11122223344 7899999


Q ss_pred             HHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        226 EFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       226 ~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |++++++++++  ...++|+.|.+|||+++
T Consensus       232 dva~a~~~l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        232 DVAQTVLFLSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HHHHHHHHHcCccccCCcCCEEeeCCceec
Confidence            99999999997  35789999999999864

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-38  Score=258.86  Aligned_cols=235  Identities=30%  Similarity=0.479  Sum_probs=201.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCC-CchhHHHHHHhC-----CCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLP-TSEGESVAKELG-----PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~-----~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++||||++|||++++++|+++|++|++++|+ .+.+++..+++.     ..+.++++|++|+++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 666666555442     1245689999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|......+.+      .+.+++++.+++|+.+++.+++.+++.|.+++      .++|+++||..+..+.+++.
T Consensus        82 ~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~ii~~ss~~~~~~~~~~~  149 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQ------IELDEWRRVMAINVESIFLGCKHALPYLRASQ------PASIVNISSVAAFKAEPDYT  149 (251)
T ss_pred             EEEECCCcCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC------CcEEEEecChhhccCCCCCc
Confidence            9999999865554444      68899999999999999999999999998765      68999999999999989999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCC--cEEEEEecCCccccccccch-----HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAG--IRVNTIAPGLFDTPLLSMLN-----EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .|+++|++++.++++++.|+.+++  |++++++||+++|++.....     ++......+..|. +++.+|+|+|+.+++
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~  228 (251)
T PRK07069        150 AYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPL-GRLGEPDDVAHAVLY  228 (251)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCC-CCCcCHHHHHHHHHH
Confidence            999999999999999999998765  99999999999999865321     2223334445665 788899999999999


Q ss_pred             HhcC--CCcccceEEecCCcccC
Q psy12833        234 IITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      |+++  .+++|+.+.+|||++.+
T Consensus       229 l~~~~~~~~~g~~i~~~~g~~~~  251 (251)
T PRK07069        229 LASDESRFVTGAELVIDGGICAM  251 (251)
T ss_pred             HcCccccCccCCEEEECCCeecC
Confidence            9974  68999999999998754

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-38  Score=267.32  Aligned_cols=239  Identities=30%  Similarity=0.433  Sum_probs=196.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||+++||||++|||++++++|+++|++|++++++. +..++..+++   +.++.++++|++|+++++++++.+.+ ++
T Consensus        10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g   88 (306)
T PRK07792         10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LG   88 (306)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hC
Confidence            6799999999999999999999999999999998854 3455555544   56788999999999999999999999 89


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCC-CCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNE-DGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~~~~ii~vss~~~~~~~  156 (254)
                      ++|++|||||......+.+      .+.++|++.+++|+.+++++++++.++|.++.... ....|+||++||..+..+.
T Consensus        89 ~iD~li~nAG~~~~~~~~~------~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFN------MSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP  162 (306)
T ss_pred             CCCEEEECCCCCCCCCccc------CCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC
Confidence            9999999999876554444      78899999999999999999999999997542111 1124799999999999888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|+++|+++++|++.++.|+.++||+||+|+||. .|++.........+....   . ....+|+++|..+.||++
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~~~---~-~~~~~pe~va~~v~~L~s  237 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVEAG---G-IDPLSPEHVVPLVQFLAS  237 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhhhh---c-cCCCCHHHHHHHHHHHcC
Confidence            88899999999999999999999999999999999994 787754321111110011   1 223589999999999997


Q ss_pred             C--CCcccceEEecCCcc
Q psy12833        237 N--PLINGEVIRIDGALR  252 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~  252 (254)
                      +  .+++|+++.+|||..
T Consensus       238 ~~~~~~tG~~~~v~gg~~  255 (306)
T PRK07792        238 PAAAEVNGQVFIVYGPMV  255 (306)
T ss_pred             ccccCCCCCEEEEcCCeE
Confidence            4  589999999999974

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-39  Score=266.80  Aligned_cols=228  Identities=29%  Similarity=0.403  Sum_probs=196.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.++++++.++++  .++..++||++|+++++++++++.+.++++
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999999988888877774  346667799999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.+.       .++||++||..+..+.++.
T Consensus        87 d~vI~nAG~~~~~~~~~------~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  153 (296)
T PRK05872         87 DVVVANAGIASGGSVAQ------VDPDAFRRVIDVNLLGVFHTVRATLPALIER-------RGYVLQVSSLAAFAAAPGM  153 (296)
T ss_pred             CEEEECCCcCCCcCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------CCEEEEEeCHhhcCCCCCc
Confidence            99999999876544444      7899999999999999999999999999764       4899999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH--HHHHHHHhcC--CCCCCCCCHHHHHHHHHHHh
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSI--PAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~  235 (254)
                      ..|+++|+++++|+++++.|+.++||++++++||+++|++.....+  ...+.+....  |. ++..+|+|+|+.+++++
T Consensus       154 ~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~va~~i~~~~  232 (296)
T PRK05872        154 AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPL-RRTTSVEKCAAAFVDGI  232 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcc-cCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998754321  2223333333  33 78889999999999999


Q ss_pred             cC--CCcccc
Q psy12833        236 TN--PLINGE  243 (254)
Q Consensus       236 ~~--~~~~G~  243 (254)
                      ++  .+++|.
T Consensus       233 ~~~~~~i~~~  242 (296)
T PRK05872        233 ERRARRVYAP  242 (296)
T ss_pred             hcCCCEEEch
Confidence            64  444443

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=261.26  Aligned_cols=238  Identities=22%  Similarity=0.348  Sum_probs=189.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC----chhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT----SEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~----~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +++|+++||||++|||++++++|+++|++|++++++.    +..++..+++   +.++.++++|++|+++++++++++.+
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999977666543    2333333333   45788999999999999999999999


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                      .++++|++|||||.....++.+      .+.+++++.+++|+.+++.+++.+.|.|.+        .+++++++|.....
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--------~~~iv~~~ss~~~~  151 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVE------ISEAEYDEMFAVNSKSAFFFIKEAGRHLND--------NGKIVTLVTSLLGA  151 (257)
T ss_pred             hhCCCCEEEECCcccCCCCccc------CCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--------CCCEEEEecchhcc
Confidence            9999999999999865444444      688999999999999999999999998864        35677764433334


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHH---HHHhcCCC-CCCCCCHHHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRN---FLARSIPA-PQRLGHPDEFAQ  229 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~---~~~~~~~~-~~~~~~~~~va~  229 (254)
                      +.+.+..|+++|+|+++|+++++.|+.+.||+|++++||+++|++.... .++...   ......+. ..++.+|+|+|.
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (257)
T PRK12744        152 FTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVP  231 (257)
T ss_pred             cCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHH
Confidence            5567889999999999999999999999999999999999999876432 111111   11111222 137889999999


Q ss_pred             HHHHHhcC-CCcccceEEecCCccc
Q psy12833        230 LVQSIITN-PLINGEVIRIDGALRM  253 (254)
Q Consensus       230 ~~~~l~~~-~~~~G~~i~~~gG~~~  253 (254)
                      .+.+++++ .+++|+++.+|||+.+
T Consensus       232 ~~~~l~~~~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        232 FIRFLVTDGWWITGQTILINGGYTT  256 (257)
T ss_pred             HHHHhhcccceeecceEeecCCccC
Confidence            99999974 5789999999999864

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-38  Score=257.35  Aligned_cols=236  Identities=24%  Similarity=0.312  Sum_probs=199.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC-CchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP-TSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ..+|++|||||++|||++++++|+++|++|+++.++ .+.++.+.+++   +.++++++||++|.+++.++++++.+.++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999887664 44455554443   56788999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.+++++.+++|+.+++.+++.+.+.+.+..      .+++++++|..+..+.|
T Consensus        87 ~iD~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~~s~~~~~~~p  154 (258)
T PRK09134         87 PITLLVNNASLFEYDSAAS------FTRASWDRHMATNLRAPFVLAQAFARALPADA------RGLVVNMIDQRVWNLNP  154 (258)
T ss_pred             CCCEEEECCcCCCCCcccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CceEEEECchhhcCCCC
Confidence            9999999999765544444      78899999999999999999999999998764      68999999988888888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      .+..|+++|++++++++.++.++.+. |++++++||++.|+.... ... ........+. ++..+++|+|+.+++++++
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~-~~~-~~~~~~~~~~-~~~~~~~d~a~~~~~~~~~  230 (258)
T PRK09134        155 DFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS-PED-FARQHAATPL-GRGSTPEEIAAAVRYLLDA  230 (258)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC-hHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHhcC
Confidence            88899999999999999999999775 999999999998865321 122 2223334555 7788999999999999998


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      ++++|+.+.+|||.++
T Consensus       231 ~~~~g~~~~i~gg~~~  246 (258)
T PRK09134        231 PSVTGQMIAVDGGQHL  246 (258)
T ss_pred             CCcCCCEEEECCCeec
Confidence            8999999999999764

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-38  Score=261.77  Aligned_cols=229  Identities=24%  Similarity=0.335  Sum_probs=193.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-------hHHHHHHh---CCCceEEecCCCCHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-------GESVAKEL---GPDVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.       +++..+++   +.++.++++|++|++++.+++++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999997653       23333332   56788999999999999999999


Q ss_pred             HHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         72 CKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      +.+.++++|++|||||.....+..+      .+.+++++.+++|+.+++.+++++.|.|.++.      .++|+++||..
T Consensus        84 ~~~~~g~id~li~~ag~~~~~~~~~------~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~------~g~iv~iss~~  151 (273)
T PRK08278         84 AVERFGGIDICVNNASAINLTGTED------TPMKRFDLMQQINVRGTFLVSQACLPHLKKSE------NPHILTLSPPL  151 (273)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCccc------CCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC------CCEEEEECCch
Confidence            9999999999999999765444433      78899999999999999999999999998765      68999999998


Q ss_pred             cccCC--CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecC-CccccccccchHHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        152 AYEGQ--SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       152 ~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg-~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      +..+.  +++..|+++|+++++++++++.|+.++||+|++++|| +++|++.+....       ...+. ++..+|+++|
T Consensus       152 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~-------~~~~~-~~~~~p~~va  223 (273)
T PRK08278        152 NLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG-------GDEAM-RRSRTPEIMA  223 (273)
T ss_pred             hccccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc-------ccccc-cccCCHHHHH
Confidence            88776  7889999999999999999999999999999999999 688876443211       11223 6778999999


Q ss_pred             HHHHHHhcC--CCcccceEEecCCc
Q psy12833        229 QLVQSIITN--PLINGEVIRIDGAL  251 (254)
Q Consensus       229 ~~~~~l~~~--~~~~G~~i~~~gG~  251 (254)
                      +.+++++++  .+++|+++ +|++.
T Consensus       224 ~~~~~l~~~~~~~~~G~~~-~~~~~  247 (273)
T PRK08278        224 DAAYEILSRPAREFTGNFL-IDEEV  247 (273)
T ss_pred             HHHHHHhcCccccceeEEE-eccch
Confidence            999999963  68999988 56653

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-38  Score=268.68  Aligned_cols=221  Identities=28%  Similarity=0.449  Sum_probs=191.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++||||||+|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+++
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999998888776655   567888999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.+++++.+++|+.+++++++.++|.|.++.      .++||+++|..++.+.|.
T Consensus        85 iD~lVnnAG~~~~~~~~~------~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~------~g~iV~isS~~~~~~~p~  152 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEE------TPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG------HGIFINMISLGGFAAQPY  152 (330)
T ss_pred             CCEEEECCCcCCCCCccc------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC------CCEEEEEcChhhcCCCCC
Confidence            999999999876555555      78999999999999999999999999999876      689999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccC-CcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGA-GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~-~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      ...|+++|+++.+|+++++.|+.+. ||+|+.++||+++|++.......    .......+....+||++|+.+++++..
T Consensus       153 ~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~----~~~~~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        153 AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY----TGRRLTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc----ccccccCCCCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999874 99999999999999986432111    111111124567999999999999964


Q ss_pred             C
Q psy12833        238 P  238 (254)
Q Consensus       238 ~  238 (254)
                      +
T Consensus       229 ~  229 (330)
T PRK06139        229 P  229 (330)
T ss_pred             C
Confidence            3

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.1e-37  Score=253.67  Aligned_cols=240  Identities=35%  Similarity=0.598  Sum_probs=207.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ||++|+++||||+++||++++++|+++|++|+++.|+... .+...+++   +.++.++++|++|++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4788999999999999999999999999999888886553 34443333   4678899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||+|.....+..+      .+.+.+++.+.+|+.+++.+.+.+.+.+.+.+      .++++++||..+..+.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~~v~iss~~~~~~~  149 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMR------MKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR------SGRIINISSVVGLMGN  149 (248)
T ss_pred             CCCCEEEECCCcCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CeEEEEEcccccCcCC
Confidence            99999999999765544444      68899999999999999999999999998765      5799999999888888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|+.+|++++.+++.+++++...+++++.++||++++++.....+..........+. ++..+++|+++.+.+++.
T Consensus       150 ~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~  228 (248)
T PRK05557        150 PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPL-GRLGQPEEIASAVAFLAS  228 (248)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            8899999999999999999999999999999999999999998776555555555555555 778899999999999996


Q ss_pred             C--CCcccceEEecCCccc
Q psy12833        237 N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~  253 (254)
                      +  .+++|+.+++|||++|
T Consensus       229 ~~~~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        229 DEAAYITGQTLHVNGGMVM  247 (248)
T ss_pred             cccCCccccEEEecCCccC
Confidence            5  6889999999999987

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-38  Score=255.51  Aligned_cols=227  Identities=30%  Similarity=0.466  Sum_probs=192.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+....      ...++.++++|++++      ++++.+.++++|+
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~------~~~~~~~~~~id~   70 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------LSGNFHFLQLDLSDD------LEPLFDWVPSVDI   70 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------cCCcEEEEECChHHH------HHHHHHhhCCCCE
Confidence            5789999999999999999999999999999999975432      134678999999987      4555556689999


Q ss_pred             EEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||+|.... .++.+      .+.+++++.+++|+.++++++++++|.+.+++      .++|+++||..+..+.++..
T Consensus        71 lv~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~  138 (235)
T PRK06550         71 LCNTAGILDDYKPLLD------TSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK------SGIIINMCSIASFVAGGGGA  138 (235)
T ss_pred             EEECCCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEcChhhccCCCCCc
Confidence            9999997532 22223      68899999999999999999999999998765      68999999999998888889


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      .|+.+|+++++++++++.|+.++||++++++||+++|++....  .+...+.+....|. +++.+|||+|+.+++++++ 
T Consensus       139 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        139 AYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPI-KRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCc-CCCCCHHHHHHHHHHHcChh
Confidence            9999999999999999999999999999999999999975421  23333444556666 8899999999999999973 


Q ss_pred             -CCcccceEEecCCccc
Q psy12833        238 -PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 -~~~~G~~i~~~gG~~~  253 (254)
                       .+++|+++.+|||.++
T Consensus       218 ~~~~~g~~~~~~gg~~~  234 (235)
T PRK06550        218 ADYMQGTIVPIDGGWTL  234 (235)
T ss_pred             hccCCCcEEEECCceec
Confidence             6899999999999864

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-38  Score=254.07  Aligned_cols=216  Identities=23%  Similarity=0.229  Sum_probs=178.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +++||||++|||++++++|+++|++|++++|+.+++++..+++  ++.+++||++|+++++++++++.+   ++|++|||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL--DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEEC
Confidence            5999999999999999999999999999999988877776654  467899999999999999887753   69999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhc
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS  165 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~s  165 (254)
                      +|..............+ +.++|++.+++|+.++++++++++|.|.+        .|+||++||..    .+....|+++
T Consensus        77 ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--------~g~Iv~isS~~----~~~~~~Y~as  143 (223)
T PRK05884         77 PAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--------GGSIISVVPEN----PPAGSAEAAI  143 (223)
T ss_pred             CCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------CCeEEEEecCC----CCCccccHHH
Confidence            98532111101111122 46899999999999999999999999953        48999999976    3456789999


Q ss_pred             hHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCCcccc
Q psy12833        166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGE  243 (254)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~  243 (254)
                      |+|+.+|+++++.|+.++||+||+|+||+++|++....         ...|.    ..|+|+++.+.||++  +.+++|+
T Consensus       144 Kaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~---------~~~p~----~~~~~ia~~~~~l~s~~~~~v~G~  210 (223)
T PRK05884        144 KAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL---------SRTPP----PVAAEIARLALFLTTPAARHITGQ  210 (223)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc---------cCCCC----CCHHHHHHHHHHHcCchhhccCCc
Confidence            99999999999999999999999999999999864211         11222    389999999999997  4799999


Q ss_pred             eEEecCCcc
Q psy12833        244 VIRIDGALR  252 (254)
Q Consensus       244 ~i~~~gG~~  252 (254)
                      ++.+|||..
T Consensus       211 ~i~vdgg~~  219 (223)
T PRK05884        211 TLHVSHGAL  219 (223)
T ss_pred             EEEeCCCee
Confidence            999999975

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-37  Score=255.35  Aligned_cols=243  Identities=27%  Similarity=0.446  Sum_probs=202.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +|+++||||+++||++++++|+++|++|++++|+.+ ..++..+++   +.++.++++|++|++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999998653 333333333   4578999999999999999999999999999


Q ss_pred             cEEEeCCccCCCc--cccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         80 DVNVNCAGISCAF--KIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        80 d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      |++|||+|.....  ++.+      .+.+++++.+++|+.+++++++.+.+.|.++....+...++|+++||..+..+.+
T Consensus        82 d~vi~~ag~~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  155 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLD------LTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP  155 (256)
T ss_pred             CEEEECCccCCCCCCChhh------CCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC
Confidence            9999999975332  2223      6889999999999999999999999999876532222356899999999998888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR-SIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      +...|+.+|++++++++.++.|+.++|+++++++||.++|++.....+.....+.. ..|. .++.+++|+++.+.++++
T Consensus       156 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~i~~l~~  234 (256)
T PRK12745        156 NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPM-PRWGEPEDVARAVAALAS  234 (256)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCc-CCCcCHHHHHHHHHHHhC
Confidence            88999999999999999999999999999999999999998865443333333322 3444 778899999999999996


Q ss_pred             C--CCcccceEEecCCccc
Q psy12833        237 N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~  253 (254)
                      +  ++++|+++++|||+++
T Consensus       235 ~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        235 GDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             CcccccCCCEEEECCCeec
Confidence            3  5789999999999864

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-38  Score=254.71  Aligned_cols=237  Identities=28%  Similarity=0.425  Sum_probs=195.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEee-CCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |++|||||++|||.+++++|+++|++|+++. |+.+.++...+++   +.++.+++||++|+++++++++++.+.++++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999998765 5555555544443   45789999999999999999999999999999


Q ss_pred             EEEeCCccCCCc-cccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC-
Q psy12833         81 VNVNCAGISCAF-KIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG-  158 (254)
Q Consensus        81 ~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~-  158 (254)
                      ++|||||..... .+.+      .+.++++..+++|+.+++.+++.+++.+..++.   ...++||++||..+..+.+. 
T Consensus        83 ~li~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~~~ii~~sS~~~~~~~~~~  153 (248)
T PRK06947         83 ALVNNAGIVAPSMPLAD------MDAARLRRMFDTNVLGAYLCAREAARRLSTDRG---GRGGAIVNVSSIASRLGSPNE  153 (248)
T ss_pred             EEEECCccCCCCCChhh------CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC---CCCcEEEEECchhhcCCCCCC
Confidence            999999976432 2333      688999999999999999999999998876431   11478999999988877654 


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +..|+++|+++++|+++++.++.+.|++|+.++||+++|++.... .++..+......|. ++..++||+++.+++++++
T Consensus       154 ~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~va~~~~~l~~~  232 (248)
T PRK06947        154 YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPL-GRAGEADEVAETIVWLLSD  232 (248)
T ss_pred             CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            568999999999999999999999999999999999999976421 22222333344555 7788999999999999974


Q ss_pred             --CCcccceEEecCCc
Q psy12833        238 --PLINGEVIRIDGAL  251 (254)
Q Consensus       238 --~~~~G~~i~~~gG~  251 (254)
                        .+++|+++.+|||.
T Consensus       233 ~~~~~~G~~~~~~gg~  248 (248)
T PRK06947        233 AASYVTGALLDVGGGR  248 (248)
T ss_pred             cccCcCCceEeeCCCC
Confidence              58999999999984

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-38  Score=258.40  Aligned_cols=239  Identities=29%  Similarity=0.423  Sum_probs=205.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||+++||++++++|+++|++|++++|+.+..+...+++     ..++.++++|++|++++.++++++.+++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999887776666554     2468889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||+|.... .++.+      .+.+++...+++|+.+++.+++.+.+.|.+..      .++|+++||..+..+
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~~sS~~~~~~  152 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQ------IDSDAWRRTVDLNVNGTMYVLKHAARELVRGG------GGSFVGISSIAASNT  152 (276)
T ss_pred             CCCCEEEECCCcccCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEechhhcCC
Confidence            999999999996532 22323      68889999999999999999999999998765      689999999999888


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .++...|+++|++++.+++.++.++...+|++++++||+++|++.....  +.....+....|. .+.++++|+|+.+.+
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  231 (276)
T PRK05875        153 HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPL-PRVGEVEDVANLAMF  231 (276)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCC-CCCcCHHHHHHHHHH
Confidence            8888999999999999999999999999999999999999999865422  2222333344555 788899999999999


Q ss_pred             HhcC--CCcccceEEecCCccc
Q psy12833        234 IITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++.  ..++|+++.+|||+.+
T Consensus       232 l~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        232 LLSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             HcCchhcCcCCCEEEECCCeec
Confidence            9974  5789999999999764

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=3.1e-38  Score=257.17  Aligned_cols=223  Identities=21%  Similarity=0.289  Sum_probs=188.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---C-CCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---G-PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++++||||++|||++++++|+ +|++|++++|+.++++++.+++   + .++.+++||++|+++++++++++.+.++++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999998 5999999999998888777665   2 2478899999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|........+      .+.+.+.+.+++|+.+++.+++.++|.|.++..     .++||++||..+..+.++..
T Consensus        80 ~lv~nag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-----~g~Iv~isS~~~~~~~~~~~  148 (246)
T PRK05599         80 LAVVAFGILGDQERAE------TDEAHAVEIATVDYTAQVSMLTVLADELRAQTA-----PAAIVAFSSIAGWRARRANY  148 (246)
T ss_pred             EEEEecCcCCCchhhh------cCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC-----CCEEEEEeccccccCCcCCc
Confidence            9999999864433322      566778889999999999999999999976521     48999999999999998999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCc
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI  240 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  240 (254)
                      .|+++|+|+.+|+++++.|+.++||+|++++||+++|++.....           +. ....+|||+|+.++++++...-
T Consensus       149 ~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~-----------~~-~~~~~pe~~a~~~~~~~~~~~~  216 (246)
T PRK05599        149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK-----------PA-PMSVYPRDVAAAVVSAITSSKR  216 (246)
T ss_pred             chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC-----------CC-CCCCCHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999998753221           11 2235899999999999975422


Q ss_pred             ccceEEecCCcc
Q psy12833        241 NGEVIRIDGALR  252 (254)
Q Consensus       241 ~G~~i~~~gG~~  252 (254)
                       ++.+.++|+..
T Consensus       217 -~~~~~~~~~~~  227 (246)
T PRK05599        217 -STTLWIPGRLR  227 (246)
T ss_pred             -CceEEeCccHH
Confidence             55677777653

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-37  Score=253.21  Aligned_cols=239  Identities=30%  Similarity=0.484  Sum_probs=202.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||+++||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|.++++++++++.+.+++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999887766665554   346788999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.......   ....+.+.+++++.+++|+.+++.+++++++.+.+.+      .++|+++||..++.+   
T Consensus        84 id~vi~~ag~~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~---  151 (250)
T PRK07774         84 IDYLVNNAAIYGGMKL---DLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG------GGAIVNQSSTAAWLY---  151 (250)
T ss_pred             CCEEEECCCCcCCCCC---CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC------CcEEEEEecccccCC---
Confidence            9999999998642110   1112268899999999999999999999999998765      689999999887654   


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      ...|+++|++++.+++++++++...||+++.++||.++|++.... .+.......+..+. .+..+|+|+++.++++++.
T Consensus       152 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~~  230 (250)
T PRK07774        152 SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPL-SRMGTPEDLVGMCLFLLSD  230 (250)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCh
Confidence            467999999999999999999999999999999999999987543 23344445556665 6778999999999999974


Q ss_pred             --CCcccceEEecCCccc
Q psy12833        238 --PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~~  253 (254)
                        +..+|+.++++||.+|
T Consensus       231 ~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        231 EASWITGQIFNVDGGQII  248 (250)
T ss_pred             hhhCcCCCEEEECCCeec
Confidence              4679999999999876

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-38  Score=258.35  Aligned_cols=236  Identities=25%  Similarity=0.322  Sum_probs=203.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.+++..++.+.++.++++|++|+++++++++++.+.++++|++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            56899999999999999999999999999999999888877777666778899999999999999999999999999999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      |||||.....++.+      .+.+++++.+++|+.+++.+++.++|.|.+++      .+++|++||..+..+.+....|
T Consensus        82 i~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~vsS~~~~~~~~~~~~Y  149 (275)
T PRK08263         82 VNNAGYGLFGMIEE------VTESEARAQIDTNFFGALWVTQAVLPYLREQR------SGHIIQISSIGGISAFPMSGIY  149 (275)
T ss_pred             EECCCCcccccccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CCEEEEEcChhhcCCCCCccHH
Confidence            99999875555444      78899999999999999999999999998765      6799999999999999999999


Q ss_pred             hhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---------hHHHHHHHHhcCCCCCCC-CCHHHHHHHHH
Q psy12833        163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---------NEKVRNFLARSIPAPQRL-GHPDEFAQLVQ  232 (254)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~va~~~~  232 (254)
                      +++|++++++++.++.|+.+.|++++.++||+++|++....         .+...+.+.+..+. ++. .+|+|+|+.++
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~dva~~~~  228 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSE-RSVDGDPEAAAEALL  228 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHh-ccCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999886311         11222233333344 566 89999999999


Q ss_pred             HHhcCCCcccceEEecCCc
Q psy12833        233 SIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       233 ~l~~~~~~~G~~i~~~gG~  251 (254)
                      ++++.+..+++++...++.
T Consensus       229 ~l~~~~~~~~~~~~~~~~~  247 (275)
T PRK08263        229 KLVDAENPPLRLFLGSGVL  247 (275)
T ss_pred             HHHcCCCCCeEEEeCchHH
Confidence            9998776677777655543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=2.1e-37  Score=252.59  Aligned_cols=240  Identities=32%  Similarity=0.509  Sum_probs=207.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+++|+++||||+++||++++++|+++|++|++++|+.++..+..+++   +.++.++.+|++|+++++++++++.+.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            578899999999999999999999999999999999977666655544   45688999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~  156 (254)
                      ++|++|||+|.....++.+      .+.+++++.++.|+.+++.+++.+++.|.+++      .++++++||..+. .+.
T Consensus        83 ~~d~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~ii~~ss~~~~~~~~  150 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAE------MDDEQWERVIDVNLTGTFLLTQAALPALIRAG------GGRIVLTSSVAGPRVGY  150 (251)
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CcEEEEEechHhhccCC
Confidence            9999999999766544434      68899999999999999999999999998765      6899999999988 778


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHH-HHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV-RNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ++...|+.+|++++.+++.++.++.+.|++++.++||.+.|+......... ...+....|. +++.+++|+|+.+.+++
T Consensus       151 ~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  229 (251)
T PRK12826        151 PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL-GRLGEPEDIAAAVLFLA  229 (251)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            888999999999999999999999999999999999999998765433222 2334445565 68899999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      +.  .+++|+++.+|||+.+
T Consensus       230 ~~~~~~~~g~~~~~~~g~~~  249 (251)
T PRK12826        230 SDEARYITGQTLPVDGGATL  249 (251)
T ss_pred             CccccCcCCcEEEECCCccC
Confidence            64  4789999999999876

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-37  Score=254.01  Aligned_cols=239  Identities=33%  Similarity=0.472  Sum_probs=203.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++++|+++||||+++||++++++|+++|++ |++++|+.+..+...+++   +.++.++.+|++|++++.++++.+.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999 999999877666554443   5568889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||+|......+.+      .+.+.++..+++|+.+++.+++.+++.|.++..     .++++++||..+..+.
T Consensus        83 g~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~g~iv~~ss~~~~~~~  151 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILD------TSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA-----EGTIVNIGSMSAHGGQ  151 (260)
T ss_pred             CCCCEEEECCCcCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CCEEEEECCcccccCC
Confidence            99999999999865444434      788999999999999999999999999976531     4799999999998888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-------HHHHHHHHhcCCCCCCCCCHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-------EKVRNFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~  229 (254)
                      ++...|+.+|+++++++++++.|+...+|++++++||+++|++.....       +.+.+......+. ++..+++|+++
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~  230 (260)
T PRK06198        152 PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPF-GRLLDPDEVAR  230 (260)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCc-cCCcCHHHHHH
Confidence            888999999999999999999999999999999999999998743211       1222233334455 77889999999


Q ss_pred             HHHHHhc--CCCcccceEEecCCc
Q psy12833        230 LVQSIIT--NPLINGEVIRIDGAL  251 (254)
Q Consensus       230 ~~~~l~~--~~~~~G~~i~~~gG~  251 (254)
                      .+.++++  ..+++|++|.+|||.
T Consensus       231 ~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        231 AVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHHHHcChhhCCccCceEeECCcc
Confidence            9999996  358999999999885

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-37  Score=251.38  Aligned_cols=238  Identities=29%  Similarity=0.419  Sum_probs=197.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC-CchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLP-TSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +|++|||||+++||.+++++|+++|++|+++.++ ++..++..+++   +.++.+++||++|.+++.++++++.+.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999887754 34444444333   4568899999999999999999999999999


Q ss_pred             cEEEeCCccCCCc-cccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         80 DVNVNCAGISCAF-KIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        80 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      |++|||+|..... .+.+      .+.+++++.+++|+.+++.+++.+++.|.++...   .+++|+++||..+..+.++
T Consensus        82 d~li~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~g~iv~~sS~~~~~~~~~  152 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQ------MDAARLTRIFATNVVGSFLCAREAVKRMSTRHGG---RGGAIVNVSSMAARLGSPG  152 (248)
T ss_pred             CEEEECCCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC---CCeEEEEECchhhcCCCCC
Confidence            9999999976432 2333      6889999999999999999999999998754210   1478999999988887776


Q ss_pred             -CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 -QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 -~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                       +..|+++|+++++|++.++.++.++||+++.++||.+.|++.... .+..........|. ++..+|+|+++.++++++
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~d~a~~~~~l~~  231 (248)
T PRK06123        153 EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPM-GRGGTAEEVARAILWLLS  231 (248)
T ss_pred             CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence             467999999999999999999999999999999999999975422 23333445555666 788899999999999997


Q ss_pred             C--CCcccceEEecCCc
Q psy12833        237 N--PLINGEVIRIDGAL  251 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~  251 (254)
                      .  .+++|+.+++|||.
T Consensus       232 ~~~~~~~g~~~~~~gg~  248 (248)
T PRK06123        232 DEASYTTGTFIDVSGGR  248 (248)
T ss_pred             ccccCccCCEEeecCCC
Confidence            3  57999999999984

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-37  Score=251.99  Aligned_cols=237  Identities=30%  Similarity=0.482  Sum_probs=200.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc-
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF-   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~-   76 (254)
                      |++++++||||++|||++++++|+++|++|++. .|+.+.+++..+++   +.++.++++|++|++++.++++++.+.+ 
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999774 67776666555544   4568899999999999999999999877 


Q ss_pred             -----CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         77 -----GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        77 -----~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                           +++|++|||+|........+      .+.+.++..+++|+.+++++++.+++.+.+        .++++++||..
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~~~~v~~sS~~  149 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIEN------TTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--------EGRVINISSAE  149 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--------CCEEEEECCHH
Confidence                 47999999999765544433      688999999999999999999999998854        36899999999


Q ss_pred             cccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHH
Q psy12833        152 AYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       152 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~  229 (254)
                      +..+.+++..|+++|++++.++++++.++.++|+++++++||+++|++.....  +..........+. ++..+++|+|+
T Consensus       150 ~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~  228 (254)
T PRK12746        150 VRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVF-GRIGQVEDIAD  228 (254)
T ss_pred             hcCCCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCc-CCCCCHHHHHH
Confidence            99998999999999999999999999999999999999999999999865432  2233333333344 77889999999


Q ss_pred             HHHHHhcC--CCcccceEEecCCccc
Q psy12833        230 LVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       230 ~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      .+.+++++  .+++|+.++++||++|
T Consensus       229 ~~~~l~~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        229 AVAFLASSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             HHHHHcCcccCCcCCCEEEeCCCccC
Confidence            99999974  4689999999999875

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.1e-37  Score=250.31  Aligned_cols=238  Identities=37%  Similarity=0.585  Sum_probs=207.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +.+|++|||||+++||++++++|+++|++|+++ +|+.+..++..+++   +.++.++++|++|+++++++++.+.+.++
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999998 89887776665544   45688999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||+|.....+..+      .+.+++++.+++|+.+++.+++.+.+.+.+++      .++++++||..+..+.+
T Consensus        83 ~id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~~v~~sS~~~~~~~~  150 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTD------MTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK------SGVIVNISSIWGLIGAS  150 (247)
T ss_pred             CCCEEEECCCcCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEECCHhhccCCC
Confidence            9999999999864433333      68899999999999999999999999998765      68999999999988888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      ....|+.+|++++.++++++.++...|+++++++||+++|++.+...+.....+....+. ++..+++++++.++++++ 
T Consensus       151 ~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~  229 (247)
T PRK05565        151 CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPL-GRLGKPEEIAKVVLFLASD  229 (247)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCC
Confidence            889999999999999999999999999999999999999998776554444444334444 677899999999999996 


Q ss_pred             -CCCcccceEEecCCcc
Q psy12833        237 -NPLINGEVIRIDGALR  252 (254)
Q Consensus       237 -~~~~~G~~i~~~gG~~  252 (254)
                       ...++|+++.+|+|++
T Consensus       230 ~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        230 DASYITGQIITVDGGWT  246 (247)
T ss_pred             ccCCccCcEEEecCCcc
Confidence             4688999999999985

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-38  Score=265.63  Aligned_cols=221  Identities=25%  Similarity=0.358  Sum_probs=191.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++.+.+.+++
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            56899999999999999999999999999999999988877766654   567889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++.+      .+.+++++.+++|+.+++++++.+++.|.+++      .++||++||..+..+.+.
T Consensus        86 iD~lInnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~------~g~iV~isS~~~~~~~~~  153 (334)
T PRK07109         86 IDTWVNNAMVTVFGPFED------VTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD------RGAIIQVGSALAYRSIPL  153 (334)
T ss_pred             CCEEEECCCcCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEeCChhhccCCCc
Confidence            999999999765554444      78999999999999999999999999998875      689999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhcc--CCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAG--AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ...|+++|+++.+|+++++.|+..  .+|+++.|+||.++|++.........   ....+. .+..+|||+|+.++++++
T Consensus       154 ~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~---~~~~~~-~~~~~pe~vA~~i~~~~~  229 (334)
T PRK07109        154 QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLP---VEPQPV-PPIYQPEVVADAILYAAE  229 (334)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcc---ccccCC-CCCCCHHHHHHHHHHHHh
Confidence            999999999999999999999975  47999999999999997643221110   011222 567899999999999997


Q ss_pred             CC
Q psy12833        237 NP  238 (254)
Q Consensus       237 ~~  238 (254)
                      .+
T Consensus       230 ~~  231 (334)
T PRK07109        230 HP  231 (334)
T ss_pred             CC
Confidence            54

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=256.86  Aligned_cols=225  Identities=28%  Similarity=0.361  Sum_probs=190.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|++++.++++++.+.+++
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999988887776665   446888999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++..     .++||++||..+..+.++
T Consensus        84 id~li~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~-----~g~iv~isS~~~~~~~~~  152 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVE------MTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT-----GGHVVFTASFAGLVPNAG  152 (275)
T ss_pred             CCEEEECCCcCCCCCccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-----CCEEEEeCChhhccCCCC
Confidence            999999999865555544      789999999999999999999999999977531     479999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHH---H-----HHhcCCCCCCCCCHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN---F-----LARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~va~~  230 (254)
                      ...|+++|+++.+|+++++.|+.++||++++++||.++|++..........   .     .....+......+|+|+|+.
T Consensus       153 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (275)
T PRK05876        153 LGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQL  232 (275)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHH
Confidence            999999999999999999999999999999999999999976432110000   0     00011111346799999999


Q ss_pred             HHHHhcC
Q psy12833        231 VQSIITN  237 (254)
Q Consensus       231 ~~~l~~~  237 (254)
                      ++..+..
T Consensus       233 ~~~ai~~  239 (275)
T PRK05876        233 TADAILA  239 (275)
T ss_pred             HHHHHHc
Confidence            9988853

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=249.59  Aligned_cols=236  Identities=25%  Similarity=0.358  Sum_probs=201.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|+++||||+++||++++++|+++|++|++++|+.+.+++..+++ +.++.++++|++|++++.++++++.++++++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999999999988877776655 3468899999999999999999999999999999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      |||+|.....++.+      .+.+++.+.+++|+.+++.+.+.+.+.+.++.      .++|+++||..+..+ .+...|
T Consensus        82 i~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~-~~~~~y  148 (257)
T PRK07074         82 VANAGAARAASLHD------TTPASWRADNALNLEAAYLCVEAVLEGMLKRS------RGAVVNIGSVNGMAA-LGHPAY  148 (257)
T ss_pred             EECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CeEEEEEcchhhcCC-CCCccc
Confidence            99999865544433      68899999999999999999999999998765      689999999876543 356789


Q ss_pred             hhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      +.+|++++.++++++.++.++|++|+.++||+++|++.....   +..........|. .++.+++|+++++++++++  
T Consensus       149 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~  227 (257)
T PRK07074        149 SAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPL-QDFATPDDVANAVLFLASPAA  227 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCchh
Confidence            999999999999999999999999999999999998764321   2222333334455 7889999999999999964  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      .+++|+.+.+|||++.
T Consensus       228 ~~~~g~~~~~~~g~~~  243 (257)
T PRK07074        228 RAITGVCLPVDGGLTA  243 (257)
T ss_pred             cCcCCcEEEeCCCcCc
Confidence            6889999999999863

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-36  Score=248.66  Aligned_cols=237  Identities=28%  Similarity=0.351  Sum_probs=197.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHH---HhCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAK---ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++++++|||||+++||++++++|+++|++|++..|+. +.......   +.+.++.++.+|+++++++.++++++.+.++
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999998877643 33333222   2245678899999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....+..+      .+.+.+++.+++|+.+.+.+++.+.+.+.+        .++||++||..+..+.+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~  149 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLN------VDDKLIDKHISTDFKSVIYCSQELAKEMRE--------GGAIVNIASVAGIRPAY  149 (252)
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--------CcEEEEEcchhccCCCC
Confidence            9999999999865554444      678889999999999999999999999865        47999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH---HHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE---KVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +...|+++|+++++++++++.|+.+ +++++.+.||+++|++......   ...+...+..+..++.++|+|+|+.++++
T Consensus       150 ~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  228 (252)
T PRK06077        150 GLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAI  228 (252)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999988 9999999999999987533211   00111222222237789999999999999


Q ss_pred             hcCCCcccceEEecCCccc
Q psy12833        235 ITNPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~~~~~G~~i~~~gG~~~  253 (254)
                      ++.+..+|+.+.+|+|+++
T Consensus       229 ~~~~~~~g~~~~i~~g~~~  247 (252)
T PRK06077        229 LKIESITGQVFVLDSGESL  247 (252)
T ss_pred             hCccccCCCeEEecCCeec
Confidence            9877889999999999876

>KOG4169|consensus

Probab=100.00  E-value=2.2e-38  Score=242.44  Aligned_cols=231  Identities=29%  Similarity=0.448  Sum_probs=196.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH--Hh--CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK--EL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~--~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +.||.+++||+.+|||++.+++|+++|..+.++..+.+..+..++  +.  ...+.|++||+++..+++++++++..++|
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999998888888777655543  22  45689999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      .+|++||+||+.              +..+|++.+++|+.|.++-+...+|+|.+++   ....|.||++||..+..|.|
T Consensus        83 ~iDIlINgAGi~--------------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~---gG~GGiIvNmsSv~GL~P~p  145 (261)
T KOG4169|consen   83 TIDILINGAGIL--------------DDKDWERTINVNLTGVINGTQLALPYMDKKQ---GGKGGIIVNMSSVAGLDPMP  145 (261)
T ss_pred             ceEEEEcccccc--------------cchhHHHhhccchhhhhhhhhhhhhhhhhhc---CCCCcEEEEeccccccCccc
Confidence            999999999983              6688999999999999999999999999875   33478999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHh--ccCCcEEEEEecCCccccccccchH-----HHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDL--AGAGIRVNTIAPGLFDTPLLSMLNE-----KVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~Pg~~~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      ..+.|++||+++.+|+|++|...  .+.||+++++|||+++|++.+.+.+     +..+.+.+.+.. -...+|++++..
T Consensus       146 ~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~-~~~q~~~~~a~~  224 (261)
T KOG4169|consen  146 VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALER-APKQSPACCAIN  224 (261)
T ss_pred             cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHH-cccCCHHHHHHH
Confidence            99999999999999999988765  5679999999999999998876632     122222222222 224589999999


Q ss_pred             HHHHhcCCCcccceEEecCCc
Q psy12833        231 VQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       231 ~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      ++-+++. ..||+.+-+|.|.
T Consensus       225 ~v~aiE~-~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  225 IVNAIEY-PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHhh-ccCCcEEEEecCc
Confidence            9999987 4799999999874

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=245.55  Aligned_cols=229  Identities=26%  Similarity=0.367  Sum_probs=194.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|+++||||+++||++++++|+++|++|++++|+.+..        ....++++|++|+++++++++++.+.+ ++|+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~   71 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------FPGELFACDLADIEQTAATLAQINEIH-PVDA   71 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------cCceEEEeeCCCHHHHHHHHHHHHHhC-CCcE
Confidence            4689999999999999999999999999999999986541        123578999999999999999998876 6899


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||+|.....++.+      .+.++++..+++|+.+++.+.+.++|.|.++.      .++|+++||.. ..+.+....
T Consensus        72 vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~-~~~~~~~~~  138 (234)
T PRK07577         72 IVNNVGIALPQPLGK------IDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE------QGRIVNICSRA-IFGALDRTS  138 (234)
T ss_pred             EEECCCCCCCCChHH------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEEcccc-ccCCCCchH
Confidence            999999866554444      68899999999999999999999999998765      68999999985 346677889


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      |+++|+++++++++++.|+.+.||++++++||+++|++.....   +.......+..+. ++...|+|+|+.+++++++ 
T Consensus       139 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        139 YSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM-RRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999999865432   2222333445555 7788999999999999974 


Q ss_pred             -CCcccceEEecCCccc
Q psy12833        238 -PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 -~~~~G~~i~~~gG~~~  253 (254)
                       .+++|+.+.+|||.++
T Consensus       218 ~~~~~g~~~~~~g~~~~  234 (234)
T PRK07577        218 AGFITGQVLGVDGGGSL  234 (234)
T ss_pred             cCCccceEEEecCCccC
Confidence             5789999999999874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.7e-36  Score=245.17  Aligned_cols=240  Identities=36%  Similarity=0.606  Sum_probs=209.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +|.++++|||||+++||++++++|+++|++|++++|+.++.+....++   +.++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            367799999999999999999999999999999999988766655543   56788999999999999999999999899


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||+|.....+..+      .+.++++..++.|+.+.+++++.+.+.+.+..      .++||++||..+..+.+
T Consensus        82 ~id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~~ss~~~~~~~~  149 (246)
T PRK05653         82 ALDILVNNAGITRDALLPR------MSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR------YGRIVNISSVSGVTGNP  149 (246)
T ss_pred             CCCEEEECCCcCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEECcHHhccCCC
Confidence            9999999999765543333      68899999999999999999999999997765      57999999998888888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|+.+|++++.+++++++++.+.+++++.++||.+.++......+...+......+. +...+++|+++.+.++++.
T Consensus       150 ~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~~~~  228 (246)
T PRK05653        150 GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPL-GRLGQPEEVANAVAFLASD  228 (246)
T ss_pred             CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            888999999999999999999999899999999999999998765444444445555666 7789999999999999964


Q ss_pred             --CCcccceEEecCCccc
Q psy12833        238 --PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~~  253 (254)
                        ..++|++++++||+.|
T Consensus       229 ~~~~~~g~~~~~~gg~~~  246 (246)
T PRK05653        229 AASYITGQVIPVNGGMYM  246 (246)
T ss_pred             hhcCccCCEEEeCCCeeC
Confidence              6789999999999865

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=245.83  Aligned_cols=235  Identities=35%  Similarity=0.598  Sum_probs=198.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC----CchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP----TSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~----~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +++++++||||+++||++++++|+++|++|++++|.    .+..+++.+++   +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999987664    33333333333   45788999999999999999999999


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHH-HHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA-QLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                      .++++|++|||+|.....++.+      .+.+++++.+++|+.+++.+++++. +.+.++.      .+++|++||..+.
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~~~iv~~sS~~~~  151 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAE------LSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR------GGRIVNIASVAGV  151 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC------CeEEEEECCchhc
Confidence            9899999999999876544444      6889999999999999999999999 6555544      5789999999999


Q ss_pred             cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        154 EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .+.+++..|+.+|++++.+++.++.++.+.|+++++++||+++|++.......  +...+..+. .+..+++|+++.+++
T Consensus       152 ~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~~~~~va~~~~~  228 (249)
T PRK12827        152 RGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT--EHLLNPVPV-QRLGEPDEVAALVAF  228 (249)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH--HHHHhhCCC-cCCcCHHHHHHHHHH
Confidence            88888999999999999999999999999999999999999999976543221  233334454 667799999999999


Q ss_pred             HhcC--CCcccceEEecCCc
Q psy12833        234 IITN--PLINGEVIRIDGAL  251 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~gG~  251 (254)
                      ++++  ..++|+.+.+|||+
T Consensus       229 l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        229 LVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HcCcccCCccCcEEEeCCCC
Confidence            9964  68899999999996

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=250.47  Aligned_cols=225  Identities=24%  Similarity=0.295  Sum_probs=191.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |+.+|++|||||++|||++++++|+++|++|++++|+.++++.+.+..+.++.++++|++|++++.++++++.+.++++|
T Consensus         1 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          1 MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            67789999999999999999999999999999999998887777665566788999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....+..+      .+.+++++.+++|+.++++++++++|.+.++.      .++||++||..+..+.++..
T Consensus        81 ~vv~~ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~------~~~iv~iSS~~~~~~~~~~~  148 (277)
T PRK06180         81 VLVNNAGYGHEGAIEE------SPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR------RGHIVNITSMGGLITMPGIG  148 (277)
T ss_pred             EEEECCCccCCccccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC------CCEEEEEecccccCCCCCcc
Confidence            9999999865444444      78899999999999999999999999998765      67999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-------hHHHHH---H---HHhcCCCCCCCCCHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-------NEKVRN---F---LARSIPAPQRLGHPDEF  227 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-------~~~~~~---~---~~~~~~~~~~~~~~~~v  227 (254)
                      .|+++|+++++++++++.|+.+.|+++++++||.++|++....       .++...   .   .....+. .++.+|+|+
T Consensus       149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dv  227 (277)
T PRK06180        149 YYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG-KQPGDPAKA  227 (277)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc-CCCCCHHHH
Confidence            9999999999999999999999999999999999999864221       111111   1   1111222 567799999


Q ss_pred             HHHHHHHhcCC
Q psy12833        228 AQLVQSIITNP  238 (254)
Q Consensus       228 a~~~~~l~~~~  238 (254)
                      |+.+++++.++
T Consensus       228 a~~~~~~l~~~  238 (277)
T PRK06180        228 AQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHcCC
Confidence            99999999753

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-37  Score=246.52  Aligned_cols=223  Identities=29%  Similarity=0.404  Sum_probs=189.6

Q ss_pred             EEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          8 LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         8 lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      |||||++|||++++++|+++|++|++++|+.+++++..+++  +.+++++.||++|++++.+++++    .+++|++|||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEEC
Confidence            69999999999999999999999999999987777666655  46788999999999999998875    3789999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhc
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS  165 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~s  165 (254)
                      +|.....++.+      .+.+++++.+++|+.+++++++  .+.+.  +      .++|+++||..+..+.++...|+++
T Consensus        77 ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~------~g~iv~~ss~~~~~~~~~~~~Y~~s  140 (230)
T PRK07041         77 AADTPGGPVRA------LPLAAAQAAMDSKFWGAYRVAR--AARIA--P------GGSLTFVSGFAAVRPSASGVLQGAI  140 (230)
T ss_pred             CCCCCCCChhh------CCHHHHHHHHHHHHHHHHHHHh--hhhhc--C------CeEEEEECchhhcCCCCcchHHHHH
Confidence            99866544444      6889999999999999999999  34442  2      5899999999999999999999999


Q ss_pred             hHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch----HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcc
Q psy12833        166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN----EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN  241 (254)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  241 (254)
                      |+++++++++++.|+..  +++++++||+++|+++....    ....+......|. ++..+|+|+|+.+++++++.+++
T Consensus       141 K~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  217 (230)
T PRK07041        141 NAALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA-RRVGQPEDVANAILFLAANGFTT  217 (230)
T ss_pred             HHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhcCCCcC
Confidence            99999999999999975  99999999999999865322    1222333445565 77889999999999999988999


Q ss_pred             cceEEecCCccc
Q psy12833        242 GEVIRIDGALRM  253 (254)
Q Consensus       242 G~~i~~~gG~~~  253 (254)
                      |+.+.+|||+.+
T Consensus       218 G~~~~v~gg~~~  229 (230)
T PRK07041        218 GSTVLVDGGHAI  229 (230)
T ss_pred             CcEEEeCCCeec
Confidence            999999999876

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.5e-37  Score=268.78  Aligned_cols=237  Identities=28%  Similarity=0.420  Sum_probs=200.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC--chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT--SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++|+++|||||++|||++++++|+++|++|++++|+.  +.+++..+++  +..++.||++|+++++++++.+.+.++++
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV--GGTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999999998843  3344444444  34678999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||+|......+.+      .+.++|+..+++|+.+++++.+.+.+.+..++      .++||++||..+..+.+++
T Consensus       286 d~vi~~AG~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~------~g~iv~~SS~~~~~g~~~~  353 (450)
T PRK08261        286 DIVVHNAGITRDKTLAN------MDEARWDSVLAVNLLAPLRITEALLAAGALGD------GGRIVGVSSISGIAGNRGQ  353 (450)
T ss_pred             CEEEECCCcCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC------CCEEEEECChhhcCCCCCC
Confidence            99999999875544444      78999999999999999999999999655443      5899999999999888899


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--C
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--N  237 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~  237 (254)
                      ..|+++|+++++|+++++.|+.++||++++++||.++|++.........+......+. .+...|+|+|+.+.||++  +
T Consensus       354 ~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l-~~~~~p~dva~~~~~l~s~~~  432 (450)
T PRK08261        354 TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSL-QQGGLPVDVAETIAWLASPAS  432 (450)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCc-CCCCCHHHHHHHHHHHhChhh
Confidence            9999999999999999999999999999999999999988765433222222223344 677899999999999997  4


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      .++||++|.+|||..|
T Consensus       433 ~~itG~~i~v~g~~~~  448 (450)
T PRK08261        433 GGVTGNVVRVCGQSLL  448 (450)
T ss_pred             cCCCCCEEEECCCccc
Confidence            6899999999998653

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-37  Score=252.50  Aligned_cols=214  Identities=30%  Similarity=0.418  Sum_probs=190.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+++++||||||+|||++++++|+++|++|++++|+.+.+++..++++ ++.++.||++|+++++++++++.+.++++|+
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-LVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999999888877766654 5788999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||......+.+      .+.+++++.+++|+.+++.+++.++|.|.++.      .++|+++||..+..+.++...
T Consensus        82 li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  149 (273)
T PRK07825         82 LVNNAGVMPVGPFLD------EPDAVTRRILDVNVYGVILGSKLAAPRMVPRG------RGHVVNVASLAGKIPVPGMAT  149 (273)
T ss_pred             EEECCCcCCCCcccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCEEEEEcCccccCCCCCCcc
Confidence            999999876555544      78899999999999999999999999998876      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP  238 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  238 (254)
                      |+++|+++.+|+++++.|+.+.||+++.++||+++|++......         ... ....+++|+|+.++.++.++
T Consensus       150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~~-~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG---------AKG-FKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc---------ccC-CCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999988643211         111 34679999999999999653

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-37  Score=248.59  Aligned_cols=225  Identities=19%  Similarity=0.229  Sum_probs=192.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCC--HHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTS--EEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~--~~~~~~~~~~~~~~   75 (254)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..++..+++    +..+.++++|++|  .+++.++++++.+.
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999998877776655    3457788999986  57899999999998


Q ss_pred             c-CCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         76 F-GKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        76 ~-~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                      + +++|++|||||.... .++.+      .+.+++++.+++|+.+++.+++++++.|.+..      .++++++||..+.
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~------~~~iv~~ss~~~~  151 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDF------QTVAEWVNQYRINTVAPMGLTRALFPLLKQSP------DASVIFVGESHGE  151 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccc------cCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC------CCEEEEEeccccc
Confidence            8 789999999997532 22333      78999999999999999999999999998765      5899999999999


Q ss_pred             cCCCCCccchhchHHHHHhHHHHHHHhccC-CcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        154 EGQSGQVAYSASKSGIVGMTLPMARDLAGA-GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      .+.++...|+++|++++.++++++.|+.++ +|+|+.++||+++|++.....+.        ... .+...++|+++.+.
T Consensus       152 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~--------~~~-~~~~~~~~~~~~~~  222 (239)
T PRK08703        152 TPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPG--------EAK-SERKSYGDVLPAFV  222 (239)
T ss_pred             cCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCC--------CCc-cccCCHHHHHHHHH
Confidence            998888999999999999999999999887 69999999999999975432111        001 34569999999999


Q ss_pred             HHhc--CCCcccceEEe
Q psy12833        233 SIIT--NPLINGEVIRI  247 (254)
Q Consensus       233 ~l~~--~~~~~G~~i~~  247 (254)
                      ++++  ++++||++|.+
T Consensus       223 ~~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        223 WWASAESKGRSGEIVYL  239 (239)
T ss_pred             HHhCccccCcCCeEeeC
Confidence            9997  68999999875

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-36  Score=250.21  Aligned_cols=220  Identities=27%  Similarity=0.330  Sum_probs=189.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|+++||||++|||++++++|+++|++|++++|+.++++++..   .+++++.+|++|+++++++++++.+.++++|+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            478999999999999999999999999999999999877665543   35889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++++..+++|+.+++.+++.++|.|.++.      .++||++||..+..+.+....
T Consensus        78 li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~------~g~iv~isS~~~~~~~~~~~~  145 (273)
T PRK06182         78 LVNNAGYGSYGAIED------VPIDEARRQFEVNLFGAARLTQLVLPHMRAQR------SGRIINISSMGGKIYTPLGAW  145 (273)
T ss_pred             EEECCCcCCCCchhh------CCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC------CCEEEEEcchhhcCCCCCccH
Confidence            999999876555544      78999999999999999999999999998765      689999999998888888889


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH------------H----HHHHHHhcCCCCCCCCCHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE------------K----VRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~------------~----~~~~~~~~~~~~~~~~~~~  225 (254)
                      |+++|+++++|+++++.|+.+.||++++++||+++|++.....+            +    ..+.+....+. ++..+|+
T Consensus       146 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  224 (273)
T PRK06182        146 YHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGS-GRLSDPS  224 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhcc-ccCCCHH
Confidence            99999999999999999999999999999999999997532110            0    11222233344 7788999


Q ss_pred             HHHHHHHHHhcC
Q psy12833        226 EFAQLVQSIITN  237 (254)
Q Consensus       226 ~va~~~~~l~~~  237 (254)
                      |+|+.++++++.
T Consensus       225 ~vA~~i~~~~~~  236 (273)
T PRK06182        225 VIADAISKAVTA  236 (273)
T ss_pred             HHHHHHHHHHhC
Confidence            999999999974

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=251.81  Aligned_cols=236  Identities=24%  Similarity=0.304  Sum_probs=198.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CC-CceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GP-DVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +. .+.++.+|++|+++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999887776665554   22 345689999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|......+.+      .+.+++++.+++|+.+++.+++.++|.|.++..     .++|+++||..+..+.+...
T Consensus        81 ~lv~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----~g~ii~isS~~~~~~~~~~~  149 (272)
T PRK07832         81 VVMNIAGISAWGTVDR------LTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR-----GGHLVNVSSAAGLVALPWHA  149 (272)
T ss_pred             EEEECCCCCCCCcccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-----CcEEEEEccccccCCCCCCc
Confidence            9999999865544444      799999999999999999999999999976421     47999999999988888899


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-------HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-------EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .|+++|+++.+|+++++.|+.++||+|+.++||.++|++.....       .+..+...... . ++..+|+|+|+.+++
T Consensus       150 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~vA~~~~~  227 (272)
T PRK07832        150 AYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRF-R-GHAVTPEKAAEKILA  227 (272)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhc-c-cCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999765421       11111111111 2 667899999999999


Q ss_pred             Hhc-CCCcccceEEecCCccc
Q psy12833        234 IIT-NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~-~~~~~G~~i~~~gG~~~  253 (254)
                      +++ +.+++++.+.+++|+.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~  248 (272)
T PRK07832        228 GVEKNRYLVYTSPDIRALYWF  248 (272)
T ss_pred             HHhcCCeEEecCcchHHHHHH
Confidence            996 67889998888888653

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=245.48  Aligned_cols=234  Identities=28%  Similarity=0.427  Sum_probs=198.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++++++||||+++||+++++.|+++|++|++++|+.++.+++.++.  +..++.+|++|++++.++++.    .+++|+
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~----~~~~d~   80 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET--GCEPLRLDVGDDAAIRAALAA----AGAFDG   80 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCeEEEecCCCHHHHHHHHHH----hCCCCE
Confidence            57899999999999999999999999999999999988777666554  366889999999988888775    468999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||+|........+      .+.+++++.+++|+.+++.+++++.+.+.++.     ..++|+++||..+..+.++...
T Consensus        81 vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~~  149 (245)
T PRK07060         81 LVNCAGIASLESALD------MTAEGFDRVMAVNARGAALVARHVARAMIAAG-----RGGSIVNVSSQAALVGLPDHLA  149 (245)
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCcEEEEEccHHHcCCCCCCcH
Confidence            999999865444444      68899999999999999999999999887542     1379999999999999888999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      |+.+|++++.+++.++.++.+.|+++++++||+++|++....  .+...+.+....|. +++.+++|+++.+.+++++  
T Consensus       150 y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~  228 (245)
T PRK07060        150 YCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPL-GRFAEVDDVAAPILFLLSDAA  228 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999999975421  12222333445565 8899999999999999974  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      ..++|+.+.+|||..+
T Consensus       229 ~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        229 SMVSGVSLPVDGGYTA  244 (245)
T ss_pred             CCccCcEEeECCCccC
Confidence            5889999999999864

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.9e-36  Score=276.83  Aligned_cols=239  Identities=30%  Similarity=0.383  Sum_probs=203.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC-----CCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG-----PDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.     .++.+++||++|+++++++++++.+.+
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999999999887776655542     357789999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|+..+++|+.+++.+++.+++.|.++..     .++||++||..+..+.
T Consensus       492 g~iDilV~nAG~~~~~~~~~------~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~-----~g~IV~iSS~~a~~~~  560 (676)
T TIGR02632       492 GGVDIVVNNAGIATSSPFEE------TTLQEWQLNLDILATGYFLVAREAFRQMREQGL-----GGNIVFIASKNAVYAG  560 (676)
T ss_pred             CCCcEEEECCCCCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEEeChhhcCCC
Confidence            99999999999765444444      688999999999999999999999999987531     4789999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccc--cccccc------------hHHHHHHHHhcCCCCCCCC
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT--PLLSML------------NEKVRNFLARSIPAPQRLG  222 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t--~~~~~~------------~~~~~~~~~~~~~~~~~~~  222 (254)
                      ++...|+++|+++++++++++.|+.+.||+||+|+||.+.+  .++...            .++..+.+....+. ++.+
T Consensus       561 ~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l-~r~v  639 (676)
T TIGR02632       561 KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL-KRHI  639 (676)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCc-CCCc
Confidence            99999999999999999999999999999999999999864  332110            12222334455566 8889


Q ss_pred             CHHHHHHHHHHHhcC--CCcccceEEecCCcc
Q psy12833        223 HPDEFAQLVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       223 ~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      +|+|+|+++.+++++  .++||+++.+|||.+
T Consensus       640 ~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       640 FPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             CHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            999999999999963  689999999999975

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=250.20  Aligned_cols=222  Identities=20%  Similarity=0.232  Sum_probs=187.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKL   79 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~i   79 (254)
                      |..+|+++||||++|||++++++|+++|++|++++|+.+.++++.+   ..+.++.+|++|+++++++++++.+.+ +++
T Consensus         1 m~~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          1 MDMKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA---EGLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            5567999999999999999999999999999999999887766543   357889999999999999999998776 689


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||......+.+      .+.++++..+++|+.+++.+++.++|.|.++.      .++||++||..+..+.++.
T Consensus        78 d~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~------~g~iv~isS~~~~~~~~~~  145 (277)
T PRK05993         78 DALFNNGAYGQPGAVED------LPTEALRAQFEANFFGWHDLTRRVIPVMRKQG------QGRIVQCSSILGLVPMKYR  145 (277)
T ss_pred             cEEEECCCcCCCCCccc------CCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC------CCEEEEECChhhcCCCCcc
Confidence            99999999876555444      78899999999999999999999999998876      6899999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHH------------------HHHHhcCCCCCCC
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR------------------NFLARSIPAPQRL  221 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~------------------~~~~~~~~~~~~~  221 (254)
                      ..|+++|+++++|+++++.|+.++||+|++++||+++|++.........                  .............
T Consensus       146 ~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (277)
T PRK05993        146 GAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFK  225 (277)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccC
Confidence            9999999999999999999999999999999999999998754321100                  0011111111335


Q ss_pred             CCHHHHHHHHHHHhcC
Q psy12833        222 GHPDEFAQLVQSIITN  237 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~  237 (254)
                      .+||++|+.++..+.+
T Consensus       226 ~~~~~va~~i~~a~~~  241 (277)
T PRK05993        226 LGPEAVYAVLLHALTA  241 (277)
T ss_pred             CCHHHHHHHHHHHHcC
Confidence            6899999999999964

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-35  Score=243.30  Aligned_cols=240  Identities=33%  Similarity=0.491  Sum_probs=202.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC-CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG-PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++++++|||||+++||++++++|+++|++|++++|+.+..+++.++.. .++.++.+|++|++++.++++++.+.++++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999999999999999999887777665542 256889999999999999999999999999


Q ss_pred             cEEEeCCccC-CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCC-cEEEEEeccccccCCC
Q psy12833         80 DVNVNCAGIS-CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLR-GVIINTASIAAYEGQS  157 (254)
Q Consensus        80 d~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~-~~ii~vss~~~~~~~~  157 (254)
                      |++|||+|.. .......      .+.+++++.+++|+.+++.+++.+.+.+....      . ++|+++||..+..+.+
T Consensus        88 d~vi~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~~vv~~ss~~~~~~~~  155 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDE------ITPEQWEQTLAVNLNGQFYFARAAVPLLKASG------HGGVIIALSSVAGRLGYP  155 (264)
T ss_pred             CEEEECCCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CCeEEEEecccccccCCC
Confidence            9999999976 3222333      68899999999999999999999999887654      3 6899999988888888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH-----------HHHHHHHhcCCCCCCCCCHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE-----------KVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  226 (254)
                      +...|+.+|++++.+++.++.++...++++++++||+++|++......           .......+..+. .++.+++|
T Consensus       156 ~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d  234 (264)
T PRK12829        156 GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISL-GRMVEPED  234 (264)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCC-CCCCCHHH
Confidence            888999999999999999999998899999999999999987643211           111222333454 67899999


Q ss_pred             HHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        227 FAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       227 va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +|+.+.+++++  +.++|+.+.+|||.+.
T Consensus       235 ~a~~~~~l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        235 IAATALFLASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             HHHHHHHHcCccccCccCcEEEeCCCccc
Confidence            99999999963  5789999999999864

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-36  Score=245.84  Aligned_cols=233  Identities=20%  Similarity=0.278  Sum_probs=193.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCC--C--
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK--L--   79 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~--i--   79 (254)
                      |+++||||++|||++++++|+++|++|++++|+. +.++++.++.+.+++++++|++|+++++++++++.+.++.  +  
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS   81 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence            6899999999999999999999999999999987 4555555545667889999999999999999999887653  2  


Q ss_pred             cEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         80 DVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        80 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +++|+|+|.... .++.+      .+.+++.+.+++|+.+++.+++.+++.+.+.+.     .++|+++||..+..+.++
T Consensus        82 ~~~v~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~  150 (251)
T PRK06924         82 IHLINNAGMVAPIKPIEK------AESEELITNVHLNLLAPMILTSTFMKHTKDWKV-----DKRVINISSGAAKNPYFG  150 (251)
T ss_pred             eEEEEcceecccCccccc------CCHHHHHHHhccceehHHHHHHHHHHHHhccCC-----CceEEEecchhhcCCCCC
Confidence            278999997533 22333      789999999999999999999999999976421     478999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhc--cCCcEEEEEecCCccccccccchH---H---HHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLA--GAGIRVNTIAPGLFDTPLLSMLNE---K---VRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~Pg~~~t~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      +..|+++|++++++++.++.|+.  +.+|+|++|+||+++|++......   +   ..+.+.+..+. ++..+|+|+|+.
T Consensus       151 ~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  229 (251)
T PRK06924        151 WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEE-GKLLSPEYVAKA  229 (251)
T ss_pred             cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhc-CCcCCHHHHHHH
Confidence            99999999999999999999985  468999999999999998543211   1   11223333455 788999999999


Q ss_pred             HHHHhcC-CCcccceEEecC
Q psy12833        231 VQSIITN-PLINGEVIRIDG  249 (254)
Q Consensus       231 ~~~l~~~-~~~~G~~i~~~g  249 (254)
                      +++++++ ++++|+.+.+|+
T Consensus       230 ~~~l~~~~~~~~G~~~~v~~  249 (251)
T PRK06924        230 LRNLLETEDFPNGEVIDIDE  249 (251)
T ss_pred             HHHHHhcccCCCCCEeehhh
Confidence            9999975 899999999986

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-35  Score=239.91  Aligned_cols=240  Identities=34%  Similarity=0.541  Sum_probs=201.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHH---HhCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAK---ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++.|++|||||+++||++++++|+++|++|++..|+..+ .+...+   +.+.+++++.+|++|++++.++++++.+.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999998876665543 333332   2356789999999999999999999999889


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||+|......+.+      .+.+++++.+++|+.+++++++.+.+.+.+..      .++++++||..+..+.+
T Consensus        84 ~id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~~i~~SS~~~~~~~~  151 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLAD------MSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR------GGRIVNISSVAGLPGWP  151 (249)
T ss_pred             CCCEEEECCccCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CCEEEEECccccCCCCC
Confidence            9999999999765544444      68899999999999999999999999998765      57999999999998888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|+.+|++++++++.++.++.+.|++++.++||.+.+++................+. ++..+++|+++.+.++++.
T Consensus       152 ~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~~~~  230 (249)
T PRK12825        152 GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPL-GRSGTPEDIARAVAFLCSD  230 (249)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCC-CCCcCHHHHHHHHHHHhCc
Confidence            889999999999999999999999899999999999999998654332211111113444 7789999999999999964


Q ss_pred             --CCcccceEEecCCcccC
Q psy12833        238 --PLINGEVIRIDGALRMI  254 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~~~  254 (254)
                        .+.+|++|+++||+.++
T Consensus       231 ~~~~~~g~~~~i~~g~~~~  249 (249)
T PRK12825        231 ASDYITGQVIEVTGGVDVI  249 (249)
T ss_pred             cccCcCCCEEEeCCCEeeC
Confidence              47899999999999764

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=3.6e-36  Score=252.68  Aligned_cols=232  Identities=22%  Similarity=0.229  Sum_probs=188.0

Q ss_pred             EEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          8 LVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         8 lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      |||||++|||++++++|+++| ++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.++++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 99999999988877777665   34678899999999999999999998888999999


Q ss_pred             eCCccCCCc-cccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-------
Q psy12833         84 NCAGISCAF-KIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-------  155 (254)
Q Consensus        84 ~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-------  155 (254)
                      ||||+.... +..+      .+.++|++.+++|+.+++.+++.++|.|.+++.    ..++||++||..+..+       
T Consensus        81 nnAG~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~----~~g~IV~vsS~~~~~~~~~~~~~  150 (308)
T PLN00015         81 CNAAVYLPTAKEPT------FTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY----PSKRLIIVGSITGNTNTLAGNVP  150 (308)
T ss_pred             ECCCcCCCCCCcCC------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CCCEEEEEeccccccccccccCC
Confidence            999975322 2222      688999999999999999999999999987531    0379999999876421       


Q ss_pred             ----------------------------CCCCccchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCc-cccccccchH
Q psy12833        156 ----------------------------QSGQVAYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLF-DTPLLSMLNE  205 (254)
Q Consensus       156 ----------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~-~t~~~~~~~~  205 (254)
                                                  .+++.+|++||+|...+++.+++++.+ .||+|++++||++ +|++.+...+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~  230 (308)
T PLN00015        151 PKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIP  230 (308)
T ss_pred             CccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccH
Confidence                                        124568999999999999999999975 6999999999999 7888654322


Q ss_pred             HHHHHH--HhcCCCCCCCCCHHHHHHHHHHHhcC--CCcccceEEecCC
Q psy12833        206 KVRNFL--ARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGA  250 (254)
Q Consensus       206 ~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG  250 (254)
                      .....+  ....+. ++..+||+.|+.+++++++  .+.+|+++..+|+
T Consensus       231 ~~~~~~~~~~~~~~-~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~  278 (308)
T PLN00015        231 LFRLLFPPFQKYIT-KGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGG  278 (308)
T ss_pred             HHHHHHHHHHHHHh-cccccHHHhhhhhhhhccccccCCCccccccCCc
Confidence            211111  112233 6678999999999999963  4689999998886

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=246.90  Aligned_cols=216  Identities=24%  Similarity=0.301  Sum_probs=183.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++++|++|++++.++++.+.+.+++
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988877776654   456789999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-CCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-GQS  157 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-~~~  157 (254)
                      +|++|||||.....++.+..    .+.++++..+++|+.+++.+++.++|.|.+..      .++||++||..+.. +.+
T Consensus       118 id~li~~AG~~~~~~~~~~~----~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~p  187 (293)
T PRK05866        118 VDILINNAGRSIRRPLAESL----DRWHDVERTMVLNYYAPLRLIRGLAPGMLERG------DGHIINVATWGVLSEASP  187 (293)
T ss_pred             CCEEEECCCCCCCcchhhcc----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CcEEEEECChhhcCCCCC
Confidence            99999999986554433210    24678899999999999999999999998765      68999999987664 367


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|+++|+|+++|+++++.|+.++||++++++||.++|++......         ... ....+||++|+.++..+..
T Consensus       188 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~---------~~~-~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        188 LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA---------YDG-LPALTADEAAEWMVTAART  257 (293)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc---------ccC-CCCCCHHHHHHHHHHHHhc
Confidence            788999999999999999999999999999999999999998743211         001 2346999999999998864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=5e-35  Score=238.13  Aligned_cols=237  Identities=28%  Similarity=0.400  Sum_probs=195.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEE-eeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |++|||||+++||++++++|+++|++|++ ..|+.+..++...++   +.++.++++|++|+++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999986 456666655555443   45688899999999999999999999999999


Q ss_pred             EEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC-
Q psy12833         81 VNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG-  158 (254)
Q Consensus        81 ~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~-  158 (254)
                      ++|||+|.... ....+      .+.++++..+++|+.+++.+++.+++.+.+...   ...++||++||..+..+.++ 
T Consensus        82 ~vi~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---~~~g~~v~~sS~~~~~~~~~~  152 (247)
T PRK09730         82 ALVNNAGILFTQCTVEN------LTAERINRVLSTNVTGYFLCCREAVKRMALKHG---GSGGAIVNVSSAASRLGAPGE  152 (247)
T ss_pred             EEEECCCCCCCCCcccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC---CCCcEEEEECchhhccCCCCc
Confidence            99999997432 22222      688999999999999999999999999876531   11478999999988877765 


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      +..|+++|++++.+++.++.|+.+.|+++++++||.++|++.... .+..........|. ++..+++|+|+.++++++ 
T Consensus       153 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~~~~  231 (247)
T PRK09730        153 YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPM-QRGGQPEEVAQAIVWLLSD  231 (247)
T ss_pred             ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHhhcCh
Confidence            468999999999999999999999999999999999999975432 22233334445565 677899999999999997 


Q ss_pred             -CCCcccceEEecCCc
Q psy12833        237 -NPLINGEVIRIDGAL  251 (254)
Q Consensus       237 -~~~~~G~~i~~~gG~  251 (254)
                       ..+++|+++.+|||.
T Consensus       232 ~~~~~~g~~~~~~g~~  247 (247)
T PRK09730        232 KASYVTGSFIDLAGGK  247 (247)
T ss_pred             hhcCccCcEEecCCCC
Confidence             357999999999984

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1e-34  Score=236.44  Aligned_cols=236  Identities=26%  Similarity=0.409  Sum_probs=196.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++++++|||||+++||++++++|+++|++|++++|+.+ ..+....++    ...+.++.+|++|.+++.++++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56799999999999999999999999999999998643 344433332    3458889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||+|.....++.+      .+.++++..+++|+.+++.+.+++.+.+.+.       .+.+++++|..+..+.
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  150 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGS------ITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-------RGAIVNITDIHAERPL  150 (249)
T ss_pred             CCCCEEEECCCCCCCCChhh------CCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-------CeEEEEEeChhhcCCC
Confidence            99999999999765544433      5778999999999999999999999988764       4788888888888888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-chHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-LNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ++...|+.+|++++.+++.++.++.+ +++++.++||++.++.... .............+. .+..+++|+++++.+++
T Consensus       151 ~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~  228 (249)
T PRK09135        151 KGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILARTPL-KRIGTPEDIAEAVRFLL  228 (249)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHHHHhcCCc-CCCcCHHHHHHHHHHHc
Confidence            88999999999999999999999965 7999999999999987543 233333334444454 67789999999999888


Q ss_pred             c-CCCcccceEEecCCcc
Q psy12833        236 T-NPLINGEVIRIDGALR  252 (254)
Q Consensus       236 ~-~~~~~G~~i~~~gG~~  252 (254)
                      . .+..+|++|++++|..
T Consensus       229 ~~~~~~~g~~~~i~~g~~  246 (249)
T PRK09135        229 ADASFITGQILAVDGGRS  246 (249)
T ss_pred             CccccccCcEEEECCCee
Confidence            6 4568999999999975

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.8e-35  Score=269.47  Aligned_cols=239  Identities=33%  Similarity=0.428  Sum_probs=208.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC--CceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.++...++++.  ++.++.||++|+++++++++++.+.++++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999999888777776654  78899999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||.....++.+      .+.++|+..+++|+.+++.+++.+.+.+.++..     .++|+++||..+..+.++.
T Consensus       500 DvvI~~AG~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-----~g~iV~vsS~~~~~~~~~~  568 (681)
T PRK08324        500 DIVVSNAGIAISGPIEE------TSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL-----GGSIVFIASKNAVNPGPNF  568 (681)
T ss_pred             CEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-----CcEEEEECCccccCCCCCc
Confidence            99999999876555554      789999999999999999999999999987641     3799999999999998899


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCc--cccccccc------------hHHHHHHHHhcCCCCCCCCCHH
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF--DTPLLSML------------NEKVRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~--~t~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~  225 (254)
                      ..|+++|++++++++.++.++.+.||+++.++||.+  +|+++...            .++..+.+.+..+. ++.++++
T Consensus       569 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-~~~v~~~  647 (681)
T PRK08324        569 GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLL-KREVTPE  647 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCc-CCccCHH
Confidence            999999999999999999999999999999999999  78765321            11122234444555 7889999


Q ss_pred             HHHHHHHHHhc--CCCcccceEEecCCcc
Q psy12833        226 EFAQLVQSIIT--NPLINGEVIRIDGALR  252 (254)
Q Consensus       226 ~va~~~~~l~~--~~~~~G~~i~~~gG~~  252 (254)
                      |+|++++++++  ....+|+++.+|||..
T Consensus       648 DvA~a~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        648 DVAEAVVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             HHHHHHHHHhCccccCCcCCEEEECCCch
Confidence            99999999995  5688999999999975

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.1e-35  Score=267.93  Aligned_cols=224  Identities=29%  Similarity=0.404  Sum_probs=191.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++++++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.+++||++|++++.++++++.+.+++
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999988877766554   557889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||......+.+      .+.+++++.+++|+.++++++++++|.|.++..     .|+||++||.++..+.++
T Consensus       393 id~lv~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~  461 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLD------TSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT-----GGHIVNVASAAAYAPSRS  461 (582)
T ss_pred             CcEEEECCccCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CcEEEEECChhhccCCCC
Confidence            999999999876555544      789999999999999999999999999987541     379999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----HHHHH---HHHhcCCCCCCCCCHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----EKVRN---FLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~va~~  230 (254)
                      ...|++||+++++++++++.|++++||+|++|+||+++|++.+...     ++..+   ......+. .+..+||++|+.
T Consensus       462 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~va~~  540 (582)
T PRK05855        462 LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQ-RRGYGPEKVAKA  540 (582)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhcc-ccCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999865431     11001   11111222 445689999999


Q ss_pred             HHHHhcC
Q psy12833        231 VQSIITN  237 (254)
Q Consensus       231 ~~~l~~~  237 (254)
                      ++.+++.
T Consensus       541 ~~~~~~~  547 (582)
T PRK05855        541 IVDAVKR  547 (582)
T ss_pred             HHHHHHc
Confidence            9999964

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-35  Score=242.05  Aligned_cols=220  Identities=27%  Similarity=0.369  Sum_probs=187.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |+++++++||||++|||++++++|+++|++|++++|+.+..+.     ..++++++||++|+++++++++.+.+.++++|
T Consensus         1 m~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          1 MSNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----IPGVELLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            7788999999999999999999999999999999998665432     24688999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|......+.+      .+.+++++.+++|+.+++.+++.++|.|.++.      .++||++||..+..+.+...
T Consensus        76 ~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~  143 (270)
T PRK06179         76 VLVNNAGVGLAGAAEE------SSIAQAQALFDTNVFGILRMTRAVLPHMRAQG------SGRIINISSVLGFLPAPYMA  143 (270)
T ss_pred             EEEECCCCCCCcCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CceEEEECCccccCCCCCcc
Confidence            9999999876554444      78999999999999999999999999998876      68999999999999999899


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH---------HHHHHHHhc--CCCCCCCCCHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE---------KVRNFLARS--IPAPQRLGHPDEFAQ  229 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~---------~~~~~~~~~--~~~~~~~~~~~~va~  229 (254)
                      .|+++|++++++++.++.|+.+.||+++.++||+++|++......         .........  .+. .+...|+++|.
T Consensus       144 ~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~  222 (270)
T PRK06179        144 LYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAV-KKADAPEVVAD  222 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhcc-ccCCCHHHHHH
Confidence            999999999999999999999999999999999999997653210         001111111  122 55679999999


Q ss_pred             HHHHHhcCC
Q psy12833        230 LVQSIITNP  238 (254)
Q Consensus       230 ~~~~l~~~~  238 (254)
                      .++.+++.+
T Consensus       223 ~~~~~~~~~  231 (270)
T PRK06179        223 TVVKAALGP  231 (270)
T ss_pred             HHHHHHcCC
Confidence            999999754

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-35  Score=237.50  Aligned_cols=231  Identities=27%  Similarity=0.411  Sum_probs=198.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|++|||||+++||++++++|+++|++|++++|+.+...+..+++ ...+.++.+|++|.+++.++++++.+.++++|
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence            56899999999999999999999999999999999887665554444 34577889999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++||++|........+      .+.+++++.+++|+.+++.+++.+.+.+.++.      .++++++||..+..+.++..
T Consensus        85 ~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~  152 (239)
T PRK12828         85 ALVNIAGAFVWGTIAD------GDADTWDRMYGVNVKTTLNASKAALPALTASG------GGRIVNIGAGAALKAGPGMG  152 (239)
T ss_pred             EEEECCcccCcCChhh------CCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC------CCEEEEECchHhccCCCCcc
Confidence            9999999765443333      68899999999999999999999999998765      68999999999998888889


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--C
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--P  238 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~  238 (254)
                      .|+.+|++++.+++.++.++.+.+++++.++||.+.++.......        ..+. ..+++++|+|..+++++++  +
T Consensus       153 ~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~--------~~~~-~~~~~~~dva~~~~~~l~~~~~  223 (239)
T PRK12828        153 AYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP--------DADF-SRWVTPEQIAAVIAFLLSDEAQ  223 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC--------chhh-hcCCCHHHHHHHHHHHhCcccc
Confidence            999999999999999999998899999999999999985422110        0011 4567899999999999974  4


Q ss_pred             CcccceEEecCCccc
Q psy12833        239 LINGEVIRIDGALRM  253 (254)
Q Consensus       239 ~~~G~~i~~~gG~~~  253 (254)
                      +++|+.+.+|||+.+
T Consensus       224 ~~~g~~~~~~g~~~~  238 (239)
T PRK12828        224 AITGASIPVDGGVAL  238 (239)
T ss_pred             cccceEEEecCCEeC
Confidence            789999999999865

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-36  Score=244.88  Aligned_cols=229  Identities=24%  Similarity=0.260  Sum_probs=186.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |++|+++||||++|||++++++|+++|++|++++|+.+ ..+.+.+++   +.++.++++|++|++++.++++++.+.++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            67899999999999999999999999999999999754 344444433   45688999999999999999999999989


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc----
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY----  153 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~----  153 (254)
                      ++|++|||+|.....            ..++...+++|+.+++++++.+.+.|.+        .+++|++||..+.    
T Consensus        84 ~~d~vi~~ag~~~~~------------~~~~~~~~~vn~~~~~~l~~~~~~~~~~--------~~~iv~isS~~~~~~~~  143 (248)
T PRK07806         84 GLDALVLNASGGMES------------GMDEDYAMRLNRDAQRNLARAALPLMPA--------GSRVVFVTSHQAHFIPT  143 (248)
T ss_pred             CCcEEEECCCCCCCC------------CCCcceeeEeeeHHHHHHHHHHHhhccC--------CceEEEEeCchhhcCcc
Confidence            999999999864211            1123567889999999999999998853        4689999996543    


Q ss_pred             -cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hHHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        154 -EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       154 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                       .+.+.+..|+.+|++++.+++.++.|+++.||++++++||.+++++....    .+...+  ....|. +++.+|+|+|
T Consensus       144 ~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~dva  220 (248)
T PRK07806        144 VKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE--ARREAA-GKLYTVSEFA  220 (248)
T ss_pred             ccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH--HHHhhh-cccCCHHHHH
Confidence             23345678999999999999999999999999999999999998765321    111111  122444 7899999999


Q ss_pred             HHHHHHhcCCCcccceEEecCCccc
Q psy12833        229 QLVQSIITNPLINGEVIRIDGALRM  253 (254)
Q Consensus       229 ~~~~~l~~~~~~~G~~i~~~gG~~~  253 (254)
                      +.+++++++++++|++|.++||..+
T Consensus       221 ~~~~~l~~~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        221 AEVARAVTAPVPSGHIEYVGGADYF  245 (248)
T ss_pred             HHHHHHhhccccCccEEEecCccce
Confidence            9999999988899999999999764

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=249.07  Aligned_cols=232  Identities=21%  Similarity=0.259  Sum_probs=186.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..++..+++. ++.++++|++|.++++++++++.+.++++|+
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-GVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-hCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            578999999999999999999999999999999999888777666653 4889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-------  154 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-------  154 (254)
                      +|||||.....  ..      .+.++++..+++|+.+++.+++.++|.|.++.      .++||++||.....       
T Consensus       103 li~nAg~~~~~--~~------~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~------~~~iV~vSS~~~~~~~~~~~~  168 (315)
T PRK06196        103 LINNAGVMACP--ET------RVGDGWEAQFATNHLGHFALVNLLWPALAAGA------GARVVALSSAGHRRSPIRWDD  168 (315)
T ss_pred             EEECCCCCCCC--Cc------cCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC------CCeEEEECCHHhccCCCCccc
Confidence            99999975321  11      46678999999999999999999999998765      57999999976432       


Q ss_pred             -----CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHH-H--HHHHh-cCCCCCCCCCHH
Q psy12833        155 -----GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV-R--NFLAR-SIPAPQRLGHPD  225 (254)
Q Consensus       155 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-~--~~~~~-~~~~~~~~~~~~  225 (254)
                           +.+++..|+.||++++.+++.++.++.++||++++++||+++|++.+...... .  ..+.. ..+...+..+|+
T Consensus       169 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (315)
T PRK06196        169 PHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPA  248 (315)
T ss_pred             cCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHh
Confidence                 33456789999999999999999999999999999999999999875543211 1  11111 112212467999


Q ss_pred             HHHHHHHHHhcCCC--cccceEEec
Q psy12833        226 EFAQLVQSIITNPL--INGEVIRID  248 (254)
Q Consensus       226 ~va~~~~~l~~~~~--~~G~~i~~~  248 (254)
                      |+|..+++++.++.  .+|..+..|
T Consensus       249 ~~a~~~~~l~~~~~~~~~~g~~~~~  273 (315)
T PRK06196        249 QGAATQVWAATSPQLAGMGGLYCED  273 (315)
T ss_pred             HHHHHHHHHhcCCccCCCCCeEeCC
Confidence            99999999997532  244444444

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-35  Score=238.40  Aligned_cols=217  Identities=26%  Similarity=0.365  Sum_probs=187.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++|+++||||+++||++++++|+++|++|++++|+.++.+++.+++   +.++.++++|++|++++.++++++.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999987776665544   4578899999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||+|.....++.+      .+.+++++.+++|+.+++.+++.+.+.|.+++      .++|+++||..+..+.+++
T Consensus        85 d~lv~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~  152 (241)
T PRK07454         85 DVLINNAGMAYTGPLLE------MPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG------GGLIINVSSIAARNAFPQW  152 (241)
T ss_pred             CEEEECCCccCCCchhh------CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC------CcEEEEEccHHhCcCCCCc
Confidence            99999999765444434      68899999999999999999999999998765      5899999999999998889


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP  238 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  238 (254)
                      ..|+.+|++++.++++++.|+.+.|+++++++||+++|++.....      ....... .+..+++|+|+.++++++.+
T Consensus       153 ~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~------~~~~~~~-~~~~~~~~va~~~~~l~~~~  224 (241)
T PRK07454        153 GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET------VQADFDR-SAMLSPEQVAQTILHLAQLP  224 (241)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc------ccccccc-ccCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999999854211      0111112 45689999999999999743

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-35  Score=248.18  Aligned_cols=232  Identities=23%  Similarity=0.278  Sum_probs=183.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||+++||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.+++||++|.++++++++++.+.+
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999988877776655     3468899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-  155 (254)
                      +++|++|||||..... ...      .+.++++..+++|+.+++.+++.++|.|.+.       .++||++||..+..+ 
T Consensus        92 ~~iD~li~nAG~~~~~-~~~------~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-------~~riv~vsS~~~~~~~  157 (313)
T PRK05854         92 RPIHLLINNAGVMTPP-ERQ------TTADGFELQFGTNHLGHFALTAHLLPLLRAG-------RARVTSQSSIAARRGA  157 (313)
T ss_pred             CCccEEEECCccccCC-ccc------cCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-------CCCeEEEechhhcCCC
Confidence            9999999999976431 112      5778999999999999999999999999764       479999999876543 


Q ss_pred             -----------CCCCccchhchHHHHHhHHHHHHHh--ccCCcEEEEEecCCccccccccch-------HHHHHHHHhcC
Q psy12833        156 -----------QSGQVAYSASKSGIVGMTLPMARDL--AGAGIRVNTIAPGLFDTPLLSMLN-------EKVRNFLARSI  215 (254)
Q Consensus       156 -----------~~~~~~Y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~Pg~~~t~~~~~~~-------~~~~~~~~~~~  215 (254)
                                 .++...|+.||+|+.+|++.|++++  ...||+||+++||+++|++.....       ......+....
T Consensus       158 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  237 (313)
T PRK05854        158 INWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLS  237 (313)
T ss_pred             cCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHh
Confidence                       2456789999999999999999865  457899999999999999864311       11111111111


Q ss_pred             CCCCCCCCHHHHHHHHHHHhcCCCc-ccceEEe
Q psy12833        216 PAPQRLGHPDEFAQLVQSIITNPLI-NGEVIRI  247 (254)
Q Consensus       216 ~~~~~~~~~~~va~~~~~l~~~~~~-~G~~i~~  247 (254)
                      .......++++.|...++++.++.. +|..+.-
T Consensus       238 ~~~~~~~~~~~ga~~~l~~a~~~~~~~g~~~~~  270 (313)
T PRK05854        238 ARGFLVGTVESAILPALYAATSPDAEGGAFYGP  270 (313)
T ss_pred             hcccccCCHHHHHHHhhheeeCCCCCCCcEECC
Confidence            1101245889999999999865433 5665543

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-35  Score=239.70  Aligned_cols=212  Identities=27%  Similarity=0.349  Sum_probs=183.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC--CceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++++||||++|||++++++|+++|++|++++|+.+.+++..+++..  ++.+++||++|++++.++++++.++++++|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            37999999999999999999999999999999998887776665532  6889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||+|.........     +.+.+++++.+++|+.+++.+++.++|.|.++.      .++||++||..+..+.+....
T Consensus        82 lv~~ag~~~~~~~~~-----~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~------~~~iv~isS~~~~~~~~~~~~  150 (257)
T PRK07024         82 VIANAGISVGTLTEE-----REDLAVFREVMDTNYFGMVATFQPFIAPMRAAR------RGTLVGIASVAGVRGLPGAGA  150 (257)
T ss_pred             EEECCCcCCCccccc-----cCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC------CCEEEEEechhhcCCCCCCcc
Confidence            999999754322111     157899999999999999999999999998775      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      |+++|++++.|+++++.|+.++||++++++||+++|++....          ..+. ....+|+++|+.++..+..
T Consensus       151 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~-~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        151 YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN----------PYPM-PFLMDADRFAARAARAIAR  215 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC----------CCCC-CCccCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999875321          0111 2346899999999999964

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-35  Score=241.93  Aligned_cols=235  Identities=22%  Similarity=0.354  Sum_probs=194.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||+++||++++++|+++|++|++++|+.+..++..++.     +.++.++.+|++|++++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            46899999999999999999999999999999999988776665543     2468899999999999999 99999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||+|........+      .+.+++++.+++|+.+++.+++.++|.|.+.+      .++|+++||..+..+.
T Consensus        80 ~~id~vv~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~vsS~~~~~~~  147 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEE------IPVEEYRKQFETNVFGAISVTQAVLPYMRKQK------SGKIINISSISGRVGF  147 (280)
T ss_pred             CCeeEEEECCcccccCcccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CCEEEEECcccccCCC
Confidence            99999999999765544333      68899999999999999999999999998765      5799999999999998


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-------------HHHHHHHHhc--CCCCCCC
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-------------EKVRNFLARS--IPAPQRL  221 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-------------~~~~~~~~~~--~~~~~~~  221 (254)
                      ++...|+.+|+++++++++++.|+.++||++++++||.++|+++....             ..........  .+. +++
T Consensus       148 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  226 (280)
T PRK06914        148 PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGS-DTF  226 (280)
T ss_pred             CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhh-hcc
Confidence            899999999999999999999999999999999999999999764211             0111111111  123 667


Q ss_pred             CCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        222 GHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      .+|+|+|++++++++++... ..+.+..|.
T Consensus       227 ~~~~dva~~~~~~~~~~~~~-~~~~~~~~~  255 (280)
T PRK06914        227 GNPIDVANLIVEIAESKRPK-LRYPIGKGV  255 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCCC-cccccCCch
Confidence            89999999999999865433 456665544

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-35  Score=241.88  Aligned_cols=219  Identities=26%  Similarity=0.412  Sum_probs=188.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.+++||++|++++.++++.+.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999988877766554   567889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||+|......+.+      .+.+++++.+++|+.+++.+++.++|.|.++.      .++|+++||..+..+.++...
T Consensus        81 lI~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~vsS~~~~~~~~~~~~  148 (270)
T PRK05650         81 IVNNAGVASGGFFEE------LSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK------SGRIVNIASMAGLMQGPAMSS  148 (270)
T ss_pred             EEECCCCCCCCCccc------CCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC------CCEEEEECChhhcCCCCCchH
Confidence            999999876554444      78899999999999999999999999998765      589999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      |+++|+++++|+++++.|+.+.||+++.++||+++|++.....   +........ ... ...++++|+|+.++..+..
T Consensus       149 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        149 YNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGK-LLE-KSPITAADIADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHH-Hhh-cCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999865432   111111111 111 4457999999999999975

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=1.3e-34  Score=236.35  Aligned_cols=234  Identities=37%  Similarity=0.597  Sum_probs=196.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch--hHHHHHHhC----CCceEEecCCCC-HHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE--GESVAKELG----PDVKFAPVDVTS-EEDVQKAVLLCK   73 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~--~~~~~~~~~----~~~~~~~~Dls~-~~~~~~~~~~~~   73 (254)
                      ++++|++|||||++|||+++|+.|+++|++|+++.|+.+.  .+...+...    ..+.+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999888887664  344444333    468888999998 999999999999


Q ss_pred             HHcCCCcEEEeCCccCCCc-cccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         74 DSFGKLDVNVNCAGISCAF-KIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      +.+|++|++|||||..... ++.+      .+.+++++.+++|+.+++.+++.+.|.+.+        . +|+++||..+
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--------~-~Iv~isS~~~  146 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEE------LTEEDWDRVIDVNLLGAFLLTRAALPLMKK--------Q-RIVNISSVAG  146 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhh------CCHHHHHHHHHHhHHHHHHHHHHHHHhhhh--------C-eEEEECCchh
Confidence            9999999999999987653 5555      788999999999999999999988888772        3 9999999999


Q ss_pred             ccCCCC-CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHH---HHHHHhcCCCCCCCCCHHHHH
Q psy12833        153 YEGQSG-QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV---RNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       153 ~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va  228 (254)
                      . +.++ +..|++||+|+.+|++.++.|+.++||++++++||.++|++........   ........+. ++...|++++
T Consensus       147 ~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  224 (251)
T COG1028         147 L-GGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPL-GRLGTPEEVA  224 (251)
T ss_pred             c-CCCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCC-CCCcCHHHHH
Confidence            9 8777 4999999999999999999999999999999999999999886543322   1122222244 5788999999


Q ss_pred             HHHHHHhcC---CCcccceEEecCCc
Q psy12833        229 QLVQSIITN---PLINGEVIRIDGAL  251 (254)
Q Consensus       229 ~~~~~l~~~---~~~~G~~i~~~gG~  251 (254)
                      ..+.++.+.   .+++|+.+.+|||.
T Consensus       225 ~~~~~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         225 AAVAFLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HHHHHHcCcchhccccCCEEEeCCCC
Confidence            999988853   58899999999986

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=1.4e-34  Score=236.59  Aligned_cols=237  Identities=32%  Similarity=0.470  Sum_probs=200.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +|++|||||+++||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999999999999999987776666544   45788999999999999999999999989999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|........+      .+.+++++.++.|+.+++.+++.+++.+.+.+      .++++++||..+..+.+...
T Consensus        81 ~vi~~a~~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~------~~~~v~~ss~~~~~~~~~~~  148 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEE------FPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG------WGRIINIASAHGLVASPFKS  148 (255)
T ss_pred             EEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CeEEEEEcchhhcCCCCCCc
Confidence            9999999765443333      67889999999999999999999999997765      57999999998888888899


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH------------HHHHHHhcCCCCCCCCCHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK------------VRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      .|+.+|++++.+++.++.++...+++++.++||.+.+++.......            ..+.+....+. ..+.+++|+|
T Consensus       149 ~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a  227 (255)
T TIGR01963       149 AYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPT-KRFVTVDEVA  227 (255)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCcc-ccCcCHHHHH
Confidence            9999999999999999999988899999999999999875322111            01112222233 5688999999


Q ss_pred             HHHHHHhcC--CCcccceEEecCCccc
Q psy12833        229 QLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       229 ~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +.++++++.  ...+|+.+.+|||.+.
T Consensus       228 ~~~~~~~~~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       228 ETALFLASDAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             HHHHHHcCccccCccceEEEEcCcccc
Confidence            999999974  4679999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.2e-35  Score=224.00  Aligned_cols=186  Identities=26%  Similarity=0.375  Sum_probs=172.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.|.|+|||||++|||++++++|.+.|-+|++++|+++++++...+. ..++...||+.|.++.+++++.+.+.|+.+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~-p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-PEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC-cchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            46889999999999999999999999999999999999999987764 56888999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||+.....+..    .+...++.++-+.+|+++++++++.++|++.+++      .+.||+|||..++.|....+.
T Consensus        82 liNNAGIqr~~dlt~----~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~------~a~IInVSSGLafvPm~~~Pv  151 (245)
T COG3967          82 LINNAGIQRNEDLTG----AEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP------EATIINVSSGLAFVPMASTPV  151 (245)
T ss_pred             eeecccccchhhccC----CcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC------CceEEEeccccccCccccccc
Confidence            999999987766552    2257788899999999999999999999999997      799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccc
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP  198 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~  198 (254)
                      ||++|+|+..|+.+|+..++..+|.|.-+.|..++|+
T Consensus       152 YcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         152 YCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             chhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999999999999999999999999996

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.3e-35  Score=250.00  Aligned_cols=208  Identities=24%  Similarity=0.277  Sum_probs=171.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      .|++++|||||+|||++++++|+++|++|++++|+.+++++..+++     +.++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            4799999999999999999999999999999999999888877665     2357788999985  23344444444444


Q ss_pred             --CCcEEEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         78 --KLDVNVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        78 --~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                        ++|++|||||....  ..+.+      .+.+++++.+++|+.+++.+++.++|.|.+++      .|+||++||..+.
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------~g~IV~iSS~a~~  197 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHE------VDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK------KGAIINIGSGAAI  197 (320)
T ss_pred             CCCccEEEEecCcCCCCCccccc------CCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------CcEEEEEechhhc
Confidence              46799999998643  22333      78899999999999999999999999998876      6899999999987


Q ss_pred             c-C-CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        154 E-G-QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       154 ~-~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      . + .|....|++||+++++|+++++.|+.++||+|++++||+++|++.....          ..  ....+||++|+.+
T Consensus       198 ~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~----------~~--~~~~~p~~~A~~~  265 (320)
T PLN02780        198 VIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR----------SS--FLVPSSDGYARAA  265 (320)
T ss_pred             cCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC----------CC--CCCCCHHHHHHHH
Confidence            4 3 5778999999999999999999999999999999999999999864210          00  1245899999999


Q ss_pred             HHHhc
Q psy12833        232 QSIIT  236 (254)
Q Consensus       232 ~~l~~  236 (254)
                      +..+.
T Consensus       266 ~~~~~  270 (320)
T PLN02780        266 LRWVG  270 (320)
T ss_pred             HHHhC
Confidence            98885

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=5.9e-35  Score=236.19  Aligned_cols=224  Identities=21%  Similarity=0.287  Sum_probs=179.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++++||||++|||++++++|+++|  ..|++..|+....  .   ...++++++||++|.++++++.    +.++++|++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~---~~~~~~~~~~Dls~~~~~~~~~----~~~~~id~l   71 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F---QHDNVQWHALDVTDEAEIKQLS----EQFTQLDWL   71 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c---ccCceEEEEecCCCHHHHHHHH----HhcCCCCEE
Confidence            379999999999999999999985  5676666654321  1   1357889999999999988854    445789999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc---CCCCC
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE---GQSGQ  159 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~---~~~~~  159 (254)
                      |||+|..............+.+.+.+++.+++|+.+++.+++.++|.|.++.      .++++++||..+..   +.+++
T Consensus        72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~------~~~i~~iss~~~~~~~~~~~~~  145 (235)
T PRK09009         72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE------SAKFAVISAKVGSISDNRLGGW  145 (235)
T ss_pred             EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC------CceEEEEeecccccccCCCCCc
Confidence            9999986533211122333478899999999999999999999999997664      57899999865532   34667


Q ss_pred             ccchhchHHHHHhHHHHHHHhcc--CCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAG--AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      ..|+++|+++++|+++|+.|+.+  .+|+|+.++||+++|++.....        ...|. ++..+|||+|+.+++++++
T Consensus       146 ~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~-~~~~~~~~~a~~~~~l~~~  216 (235)
T PRK09009        146 YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ--------QNVPK-GKLFTPEYVAQCLLGIIAN  216 (235)
T ss_pred             chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh--------hcccc-CCCCCHHHHHHHHHHHHHc
Confidence            89999999999999999999987  6999999999999999865321        22344 6788999999999999974


Q ss_pred             --CCcccceEEecCCcc
Q psy12833        238 --PLINGEVIRIDGALR  252 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~  252 (254)
                        ++.+|+++.+|||..
T Consensus       217 ~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        217 ATPAQSGSFLAYDGETL  233 (235)
T ss_pred             CChhhCCcEEeeCCcCC
Confidence              578999999999864

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=3.5e-34  Score=231.97  Aligned_cols=232  Identities=33%  Similarity=0.586  Sum_probs=198.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +||||++++||++++++|+++|++|++++|+. +..+...+.+   +.+++++++|++|+++++++++++.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 3333333332   4568899999999999999999999999999999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      |||+|......+.+      .+.+++++.+++|+.+.+.+++.+.+.+.+..      .++++++||..+..+.+++..|
T Consensus        81 i~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~~v~~sS~~~~~g~~~~~~y  148 (239)
T TIGR01830        81 VNNAGITRDNLLMR------MKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR------SGRIINISSVVGLMGNAGQANY  148 (239)
T ss_pred             EECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CeEEEEECCccccCCCCCCchh
Confidence            99999764433333      67889999999999999999999999987654      5799999999888888889999


Q ss_pred             hhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CCc
Q psy12833        163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLI  240 (254)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~~  240 (254)
                      +++|++++.+++.++.++...|++++.++||.++|++...........+....+. ++..+++|+++.+++++++  .+.
T Consensus       149 ~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~  227 (239)
T TIGR01830       149 AASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPL-GRFGTPEEVANAVAFLASDEASYI  227 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCc-CCCcCHHHHHHHHHHHhCcccCCc
Confidence            9999999999999999999999999999999999987655544444444555665 7889999999999999953  578


Q ss_pred             ccceEEecCCc
Q psy12833        241 NGEVIRIDGAL  251 (254)
Q Consensus       241 ~G~~i~~~gG~  251 (254)
                      +|+++++++|+
T Consensus       228 ~g~~~~~~~g~  238 (239)
T TIGR01830       228 TGQVIHVDGGM  238 (239)
T ss_pred             CCCEEEeCCCc
Confidence            99999999996

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-35  Score=237.93  Aligned_cols=210  Identities=21%  Similarity=0.308  Sum_probs=177.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCch-hHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSE-GESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~-~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++++|||||++|||++++++|+++| ++|++++|+.+. +++..+++    +.++++++||++|++++.++++++.+ .
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            47899999999999999999999995 899999999876 66665555    23789999999999999999999886 4


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||+|.........      .+.++..+.+++|+.+++.+++.++|.|.+++      .++|+++||..+..+.
T Consensus        86 g~id~li~~ag~~~~~~~~~------~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~------~~~iv~isS~~g~~~~  153 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELW------QNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG------FGQIIAMSSVAGERVR  153 (253)
T ss_pred             CCCCEEEEeeecCCchhhcc------cCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC------CceEEEEechhhcCCC
Confidence            89999999999754321100      24556678899999999999999999999876      6899999999988887


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|++||+++.+|+++++.|+.++||+|+.++||+++|++.....           +. ....+|+|+|+.++..+.
T Consensus       154 ~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~-----------~~-~~~~~~~~~A~~i~~~~~  221 (253)
T PRK07904        154 RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK-----------EA-PLTVDKEDVAKLAVTAVA  221 (253)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC-----------CC-CCCCCHHHHHHHHHHHHH
Confidence            888899999999999999999999999999999999999998764321           11 234689999999999996


Q ss_pred             C
Q psy12833        237 N  237 (254)
Q Consensus       237 ~  237 (254)
                      +
T Consensus       222 ~  222 (253)
T PRK07904        222 K  222 (253)
T ss_pred             c
Confidence            4

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.6e-34  Score=235.59  Aligned_cols=226  Identities=23%  Similarity=0.327  Sum_probs=186.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +++||||++|||+++++.|+++|++|++++|+.++++++.++++.++.++++|++|.++++++++++.+.++++|++|||
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999999999999999999888887777777788999999999999999999999999999999999


Q ss_pred             CccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchh
Q psy12833         86 AGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA  164 (254)
Q Consensus        86 ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~  164 (254)
                      +|.... .++.+      .+.+++++.+++|+.+++.+++.+.+.+.+++      .++|+++||..+..+.++...|+.
T Consensus        82 ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~~Y~~  149 (248)
T PRK10538         82 AGLALGLEPAHK------ASVEDWETMIDTNNKGLVYMTRAVLPGMVERN------HGHIINIGSTAGSWPYAGGNVYGA  149 (248)
T ss_pred             CCccCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEECCcccCCCCCCCchhHH
Confidence            997532 22223      68899999999999999999999999998765      579999999999888888899999


Q ss_pred             chHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CCcc
Q psy12833        165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLIN  241 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~~~  241 (254)
                      +|++++++++.++.++.+.+|++++++||.+.++..... .............. ....+|+|+|+.++++++.  .+..
T Consensus       150 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~~~~~~~~  228 (248)
T PRK10538        150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQN-TVALTPEDVSEAVWWVATLPAHVNI  228 (248)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccc-cCCCCHHHHHHHHHHHhcCCCcccc
Confidence            999999999999999999999999999999985443211 00000111111112 3457999999999999963  3444


Q ss_pred             cce
Q psy12833        242 GEV  244 (254)
Q Consensus       242 G~~  244 (254)
                      ++.
T Consensus       229 ~~~  231 (248)
T PRK10538        229 NTL  231 (248)
T ss_pred             hhh
Confidence            443

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-34  Score=235.83  Aligned_cols=227  Identities=25%  Similarity=0.385  Sum_probs=194.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCC--CHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVT--SEEDVQKAVLLCKD   74 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls--~~~~~~~~~~~~~~   74 (254)
                      ++++|+++||||+++||.+++++|+++|++|++++|+.+..+++.+++    ..++.++.+|++  ++++++++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999988777666554    245777888875  88999999999999


Q ss_pred             HcCCCcEEEeCCccCCCc-cccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         75 SFGKLDVNVNCAGISCAF-KIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                      .++++|++|||||..... ++.+      .+.+++++.+++|+.+++++++.+.+.|.+++      .++|+++||..+.
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~------~~~iv~~ss~~~~  156 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQ------QDPEVWQDVMQVNVNATFMLTQALLPLLLKSP------AASLVFTSSSVGR  156 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCccc------CCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC------CCEEEEEccHhhc
Confidence            999999999999975432 2223      67899999999999999999999999998876      6899999999999


Q ss_pred             cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        154 EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .+.+++..|+++|++++.+++.++.++...|+++++++||.++|++.....+.        .. +.++.+|+|+++.+.+
T Consensus       157 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~  227 (247)
T PRK08945        157 QGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG--------ED-PQKLKTPEDIMPLYLY  227 (247)
T ss_pred             CCCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc--------cc-ccCCCCHHHHHHHHHH
Confidence            88889999999999999999999999999999999999999999864321111        11 2567899999999999


Q ss_pred             HhcC--CCcccceEEec
Q psy12833        234 IITN--PLINGEVIRID  248 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~  248 (254)
                      ++++  .+++|+++...
T Consensus       228 ~~~~~~~~~~g~~~~~~  244 (247)
T PRK08945        228 LMGDDSRRKNGQSFDAQ  244 (247)
T ss_pred             HhCccccccCCeEEeCC
Confidence            9964  57999998764

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-34  Score=236.98  Aligned_cols=231  Identities=23%  Similarity=0.325  Sum_probs=190.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +.|+++||||+++||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|++++.++++++.+.++++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4589999999999999999999999999999999877766655443   4568889999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||........+      .+.+++++.+++|+.+++++++.+++.+.++.      .++||++||..+..+.++.
T Consensus        89 d~vi~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~------~g~iv~isS~~~~~~~~~~  156 (274)
T PRK07775         89 EVLVSGAGDTYFGKLHE------ISTEQFESQVQIHLVGANRLATAVLPGMIERR------RGDLIFVGSDVALRQRPHM  156 (274)
T ss_pred             CEEEECCCcCCCccccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CceEEEECChHhcCCCCCc
Confidence            99999999765444444      68899999999999999999999999988765      5799999999999888888


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH-H---HHHHHh--cCCCCCCCCCHHHHHHHHHH
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-V---RNFLAR--SIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~-~---~~~~~~--~~~~~~~~~~~~~va~~~~~  233 (254)
                      ..|+.+|++++++++.++.++.+.||++++++||+++|++....... .   .+....  .... +++.+++|+|+++++
T Consensus       157 ~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a~~~  235 (274)
T PRK07775        157 GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARH-DYFLRASDLARAITF  235 (274)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhccccc-ccccCHHHHHHHHHH
Confidence            89999999999999999999998999999999999999864322111 1   111111  1122 568899999999999


Q ss_pred             HhcCCCcccceEEe
Q psy12833        234 IITNPLINGEVIRI  247 (254)
Q Consensus       234 l~~~~~~~G~~i~~  247 (254)
                      +++.+ ..+.++++
T Consensus       236 ~~~~~-~~~~~~~~  248 (274)
T PRK07775        236 VAETP-RGAHVVNM  248 (274)
T ss_pred             HhcCC-CCCCeeEE
Confidence            99754 24555544

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=238.70  Aligned_cols=218  Identities=24%  Similarity=0.379  Sum_probs=187.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++++++|||||++|||++++++|+++|++|++++|+.+.+++...++  +.++.++++|++|+++++++++.+.+ ++++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~i   81 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGGI   81 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCCC
Confidence            57899999999999999999999999999999999988777776654  45788999999999999999999876 7899


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||.....++.+      .+.+++++.+++|+.+++.+++.+.+.|.+++      .++|+++||..+..+.++.
T Consensus        82 d~lv~~ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~  149 (263)
T PRK09072         82 NVLINNAGVNHFALLED------QDPEAIERLLALNLTAPMQLTRALLPLLRAQP------SAMVVNVGSTFGSIGYPGY  149 (263)
T ss_pred             CEEEECCCCCCcccccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC------CCEEEEecChhhCcCCCCc
Confidence            99999999765443333      68899999999999999999999999998765      5899999999999898889


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP  238 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  238 (254)
                      ..|+.+|+++.+++++++.|+.+.||+|+.++||+++|++.....+..    ...  ...+..+|+|+|+.+++++...
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~----~~~--~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQAL----NRA--LGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccc----ccc--ccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999998754321111    111  1145679999999999999753

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-35  Score=244.94  Aligned_cols=233  Identities=24%  Similarity=0.306  Sum_probs=186.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++||+++||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++++|++|.++++++++++.+.+
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            46899999999999999999999999999999999887766555444     3468899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc--
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE--  154 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~--  154 (254)
                      +++|++|||||.....  ..      .+.++++..+++|+.+++.+++.+++.+.+..      .++||++||..+..  
T Consensus        94 ~~iD~li~nAg~~~~~--~~------~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~------~~~iV~vSS~~~~~~~  159 (306)
T PRK06197         94 PRIDLLINNAGVMYTP--KQ------TTADGFELQFGTNHLGHFALTGLLLDRLLPVP------GSRVVTVSSGGHRIRA  159 (306)
T ss_pred             CCCCEEEECCccccCC--Cc------cCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC------CCEEEEECCHHHhccC
Confidence            9999999999975322  11      46678899999999999999999999998765      57999999986443  


Q ss_pred             -----------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEE--ecCCccccccccchHHHHHHHHhcCCCCCCC
Q psy12833        155 -----------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTI--APGLFDTPLLSMLNEKVRNFLARSIPAPQRL  221 (254)
Q Consensus       155 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v--~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  221 (254)
                                 +.++...|+.||+++++|++.++.++++.|++++++  +||+++|++.+.........+....+  ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~  237 (306)
T PRK06197        160 AIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAP--LLA  237 (306)
T ss_pred             CCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHh--hhc
Confidence                       234567899999999999999999999888777655  79999999877654332222211111  123


Q ss_pred             CCHHHHHHHHHHHhcC-CCcccceEEecCC
Q psy12833        222 GHPDEFAQLVQSIITN-PLINGEVIRIDGA  250 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~-~~~~G~~i~~~gG  250 (254)
                      .++++-+..+++++.+ ...+|+.+..||+
T Consensus       238 ~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~  267 (306)
T PRK06197        238 QSPEMGALPTLRAATDPAVRGGQYYGPDGF  267 (306)
T ss_pred             CCHHHHHHHHHHHhcCCCcCCCeEEccCcc
Confidence            4788888888888754 4568888887764

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=3.7e-34  Score=238.24  Aligned_cols=228  Identities=25%  Similarity=0.327  Sum_probs=188.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++.+.+.+++
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887777766655   456788999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||......+.+      .+.++++..+++|+.++++++++++|.|.++........++||++||..+..+.++
T Consensus        84 id~vi~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  157 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWE------NSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA  157 (287)
T ss_pred             CCEEEECCCCCCCCCccc------CCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC
Confidence            999999999876544444      68899999999999999999999999998765221122379999999999999889


Q ss_pred             CccchhchHHHHHhHHHHHHHhcc--CCcEEEEEecCCccccccccchHH---------------HHHHHHhcCCCCCCC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAG--AGIRVNTIAPGLFDTPLLSMLNEK---------------VRNFLARSIPAPQRL  221 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~Pg~~~t~~~~~~~~~---------------~~~~~~~~~~~~~~~  221 (254)
                      ...|+++|++++.|+++++.|+..  .+|+++.++||+++|++.......               ........... ...
T Consensus       158 ~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  236 (287)
T PRK06194        158 MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVG-SGK  236 (287)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhh-ccC
Confidence            999999999999999999999874  579999999999999886442110               00111111111 224


Q ss_pred             CCHHHHHHHHHHHhc
Q psy12833        222 GHPDEFAQLVQSIIT  236 (254)
Q Consensus       222 ~~~~~va~~~~~l~~  236 (254)
                      .+++|+|+.++.++.
T Consensus       237 ~s~~dva~~i~~~~~  251 (287)
T PRK06194        237 VTAEEVAQLVFDAIR  251 (287)
T ss_pred             CCHHHHHHHHHHHHH
Confidence            799999999999885

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=234.84  Aligned_cols=218  Identities=28%  Similarity=0.324  Sum_probs=187.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHH-cCCCcEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDS-FGKLDVN   82 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~-~~~id~l   82 (254)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++++++||++|.+++.++++.+.+. ++++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            78999999999999999999999999999999988888777665 367899999999999999999998887 7899999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      |||||......+.+      .+.+++++.+++|+.+++.+++.+.+.|.+.+      .++|+++||..+..+.+....|
T Consensus        82 i~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~~Y  149 (260)
T PRK08267         82 FNNAGILRGGPFED------IPLEAHDRVIDINVKGVLNGAHAALPYLKATP------GARVINTSSASAIYGQPGLAVY  149 (260)
T ss_pred             EECCCCCCCCcccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CCEEEEeCchhhCcCCCCchhh
Confidence            99999876555444      78899999999999999999999999998765      6899999999999998889999


Q ss_pred             hhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +.+|+++++|+++++.++.++||++++++||+++|++..............  .. +...+|+|+|+.++.++..
T Consensus       150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~--~~-~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTK--RL-GVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHh--hc-cCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999865411111111111  11 3356899999999999953

>KOG1610|consensus

Probab=100.00  E-value=2.3e-34  Score=231.32  Aligned_cols=188  Identities=29%  Similarity=0.428  Sum_probs=174.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcC--C
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFG--K   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--~   78 (254)
                      +.+|.|+|||+.+|+|+.+|++|.++|++|++.+-+++..+.+..+. +.+...++.|++++++++++.+.+.+..+  +
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            35789999999999999999999999999999998888889888888 88999999999999999999999999874  5


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +-.+|||||+.......++     .+.+++++++++|++|++.++++++|+++++       .||||++||.++..+.|.
T Consensus       107 LwglVNNAGi~~~~g~~ew-----l~~~d~~~~l~vNllG~irvT~~~lpLlr~a-------rGRvVnvsS~~GR~~~p~  174 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEW-----LTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-------RGRVVNVSSVLGRVALPA  174 (322)
T ss_pred             ceeEEeccccccccCcccc-----ccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-------cCeEEEecccccCccCcc
Confidence            9999999997654433333     7999999999999999999999999999988       499999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS  201 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~  201 (254)
                      ...|++||+|++.|+.++++|+.++||+|..+.||.++|++..
T Consensus       175 ~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  175 LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999999999999999875

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.8e-34  Score=230.22  Aligned_cols=217  Identities=29%  Similarity=0.440  Sum_probs=188.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++++++||||+++||++++++|+++|++|++++|+.++.++..+++   +.++.++++|++|++++.++++++.+.+++
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999999999999987776665544   457889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|......+.+      .+.+++++.+++|+.+++.+++.+.+.+.++.      .++++++||..+..+.++
T Consensus        85 id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~ss~~~~~~~~~  152 (239)
T PRK07666         85 IDILINNAGISKFGKFLE------LDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ------SGDIINISSTAGQKGAAV  152 (239)
T ss_pred             ccEEEEcCccccCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CcEEEEEcchhhccCCCC
Confidence            999999999765444433      68899999999999999999999999998765      689999999999999888


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP  238 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  238 (254)
                      ...|+.+|+++..+++.++.|+.+.|++++.++||.++|++.......        ...+....+++|+|+.++.+++..
T Consensus       153 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        153 TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT--------DGNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc--------ccCCCCCCCHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999999999999876432110        111256789999999999999754

>KOG1208|consensus

Probab=100.00  E-value=7.8e-35  Score=241.52  Aligned_cols=221  Identities=26%  Similarity=0.346  Sum_probs=183.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +.+++++||||++|||+++|++|+++|++|++.+|+.++.++..+++     ..++.+++||++|.++++++.+++.+.+
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999999998888888776     3568889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-  155 (254)
                      +++|++|||||+.....  .      .+.|.++.++.+|+.|++.+++.++|.++++.      ++|||++||...... 
T Consensus       113 ~~ldvLInNAGV~~~~~--~------~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~------~~RIV~vsS~~~~~~~  178 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPF--S------LTKDGLELTFATNYLGHFLLTELLLPLLKRSA------PSRIVNVSSILGGGKI  178 (314)
T ss_pred             CCccEEEeCcccccCCc--c------cCccchhheehhhhHHHHHHHHHHHHHHhhCC------CCCEEEEcCccccCcc
Confidence            99999999999976544  2      57789999999999999999999999999876      589999999875110 


Q ss_pred             ------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccc-ccccchHHHHHHHHhcCCCCCCCC
Q psy12833        156 ------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP-LLSMLNEKVRNFLARSIPAPQRLG  222 (254)
Q Consensus       156 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~  222 (254)
                                  +....+|+.||.++..+++.|++.+.. ||.+++++||.+.|+ +.+ . ......+...+.. ...-
T Consensus       179 ~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~-~~~~~~l~~~l~~-~~~k  254 (314)
T KOG1208|consen  179 DLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-V-NLLLRLLAKKLSW-PLTK  254 (314)
T ss_pred             chhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-c-hHHHHHHHHHHHH-Hhcc
Confidence                        222335999999999999999999988 999999999999999 555 2 1222222222222 2234


Q ss_pred             CHHHHHHHHHHHhcCCCc
Q psy12833        223 HPDEFAQLVQSIITNPLI  240 (254)
Q Consensus       223 ~~~~va~~~~~l~~~~~~  240 (254)
                      ++++.|+..++++.++.+
T Consensus       255 s~~~ga~t~~~~a~~p~~  272 (314)
T KOG1208|consen  255 SPEQGAATTCYAALSPEL  272 (314)
T ss_pred             CHHHHhhheehhccCccc
Confidence            899999999999975533

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=8.9e-34  Score=238.67  Aligned_cols=236  Identities=20%  Similarity=0.223  Sum_probs=185.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      .+|+++||||++|||++++++|+++| ++|++++|+.+++++..+++   +.++.++++|++|.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            37899999999999999999999999 99999999988887777665   245788999999999999999999988899


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC---
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG---  155 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~---  155 (254)
                      +|++|||||+......     ..+.+.+++++.+++|+.+++.+++.++|.|.++..    ..++||++||..+..+   
T Consensus        82 iD~lI~nAG~~~~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~----~~g~IV~vsS~~~~~~~~~  152 (314)
T TIGR01289        82 LDALVCNAAVYFPTAK-----EPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN----KDKRLIIVGSITGNTNTLA  152 (314)
T ss_pred             CCEEEECCCccccCcc-----ccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC----CCCeEEEEecCccccccCC
Confidence            9999999997532111     112588999999999999999999999999986521    1379999999876421   


Q ss_pred             ------------------------------CCCCccchhchHHHHHhHHHHHHHhc-cCCcEEEEEecCCc-cccccccc
Q psy12833        156 ------------------------------QSGQVAYSASKSGIVGMTLPMARDLA-GAGIRVNTIAPGLF-DTPLLSML  203 (254)
Q Consensus       156 ------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~~-~t~~~~~~  203 (254)
                                                    ..++.+|++||+|+..+++.+++++. +.||+|++++||++ +|++.+..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~  232 (314)
T TIGR01289       153 GNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREH  232 (314)
T ss_pred             CcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccc
Confidence                                          12456899999999999999999985 46999999999999 69886542


Q ss_pred             hHHHH---HHHHhcCCCCCCCCCHHHHHHHHHHHhcCC--CcccceEEecC
Q psy12833        204 NEKVR---NFLARSIPAPQRLGHPDEFAQLVQSIITNP--LINGEVIRIDG  249 (254)
Q Consensus       204 ~~~~~---~~~~~~~~~~~~~~~~~~va~~~~~l~~~~--~~~G~~i~~~g  249 (254)
                      .....   ..+.... . ....++++.|..++.++.++  ..+|.++..++
T Consensus       233 ~~~~~~~~~~~~~~~-~-~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       233 VPLFRTLFPPFQKYI-T-KGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             cHHHHHHHHHHHHHH-h-ccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            21111   1111111 2 44678999999999988642  34677776433

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-34  Score=224.58  Aligned_cols=197  Identities=20%  Similarity=0.287  Sum_probs=170.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +++||||++|||++++++|+++ ++|++++|+..              .++||++|++++++++++    ++++|++|||
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------~~~~D~~~~~~~~~~~~~----~~~id~lv~~   62 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------DVQVDITDPASIRALFEK----VGKVDAVVSA   62 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------ceEecCCChHHHHHHHHh----cCCCCEEEEC
Confidence            7999999999999999999999 99999999753              378999999999998875    4689999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhc
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS  165 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~s  165 (254)
                      +|.....++.+      .+.++|++.+++|+.+++++++.+.|.|.+        .++|+++||..+..+.+++..|+++
T Consensus        63 ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~Y~~s  128 (199)
T PRK07578         63 AGKVHFAPLAE------MTDEDFNVGLQSKLMGQVNLVLIGQHYLND--------GGSFTLTSGILSDEPIPGGASAATV  128 (199)
T ss_pred             CCCCCCCchhh------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCeEEEEcccccCCCCCCchHHHHH
Confidence            99765444434      788999999999999999999999999964        4789999999999998999999999


Q ss_pred             hHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccceE
Q psy12833        166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVI  245 (254)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i  245 (254)
                      |+++++|+++++.|+ ++||++++++||+++|++...         .+..+. ....+|+|+|+.+..+++. ..+|+++
T Consensus       129 K~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~---------~~~~~~-~~~~~~~~~a~~~~~~~~~-~~~g~~~  196 (199)
T PRK07578        129 NGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKY---------GPFFPG-FEPVPAARVALAYVRSVEG-AQTGEVY  196 (199)
T ss_pred             HHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhh---------hhcCCC-CCCCCHHHHHHHHHHHhcc-ceeeEEe
Confidence            999999999999999 889999999999999986311         111333 4567999999999999975 5899988


Q ss_pred             Ee
Q psy12833        246 RI  247 (254)
Q Consensus       246 ~~  247 (254)
                      .+
T Consensus       197 ~~  198 (199)
T PRK07578        197 KV  198 (199)
T ss_pred             cc
Confidence            75

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-34  Score=234.74  Aligned_cols=216  Identities=21%  Similarity=0.312  Sum_probs=181.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.+   .++.++.+|++|+++++++++.+.+.++++|++||
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA---AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            799999999999999999999999999999998876665543   35788999999999999999999999999999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchh
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA  164 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~  164 (254)
                      |||.....++.+      .+.+++++.+++|+.+++.+++.++|.|.+.       .++|+++||..+..+.+....|++
T Consensus        79 ~ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~  145 (274)
T PRK05693         79 NAGYGAMGPLLD------GGVEAMRRQFETNVFAVVGVTRALFPLLRRS-------RGLVVNIGSVSGVLVTPFAGAYCA  145 (274)
T ss_pred             CCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-------CCEEEEECCccccCCCCCccHHHH
Confidence            999765544444      7899999999999999999999999999764       479999999999988888999999


Q ss_pred             chHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH-------------HHHHHHhc--CCCCCCCCCHHHHHH
Q psy12833        165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-------------VRNFLARS--IPAPQRLGHPDEFAQ  229 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~-------------~~~~~~~~--~~~~~~~~~~~~va~  229 (254)
                      +|++++.++++++.|+.++||+|++++||.++|++.+.....             ..+.+...  ... ....+|+++|+
T Consensus       146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~  224 (274)
T PRK05693        146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQ-DNPTPAAEFAR  224 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhcc-CCCCCHHHHHH
Confidence            999999999999999999999999999999999976542111             01111110  011 23458999999


Q ss_pred             HHHHHhcC
Q psy12833        230 LVQSIITN  237 (254)
Q Consensus       230 ~~~~l~~~  237 (254)
                      .++..+..
T Consensus       225 ~i~~~~~~  232 (274)
T PRK05693        225 QLLAAVQQ  232 (274)
T ss_pred             HHHHHHhC
Confidence            99999864

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-33  Score=230.83  Aligned_cols=234  Identities=22%  Similarity=0.283  Sum_probs=192.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      .|++|||||+++||++++++|+++|++|++++|+.+..+++.++.+.++.++++|++|.++++++++++.+.++++|++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999999999999999998877777766667889999999999999999999999999999999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      ||||.....+..+      .+.+++++.+++|+.++++++++++|.|.++.      .++||++||..+..+.|+...|+
T Consensus        82 ~~ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~Y~  149 (276)
T PRK06482         82 SNAGYGLFGAAEE------LSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG------GGRIVQVSSEGGQIAYPGFSLYH  149 (276)
T ss_pred             ECCCCCCCccccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCEEEEEcCcccccCCCCCchhH
Confidence            9999875544434      67899999999999999999999999998765      57999999999888888899999


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---------HHHHHHHHhcCC--CCCCCCCHHHHHHHHH
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---------EKVRNFLARSIP--APQRLGHPDEFAQLVQ  232 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~va~~~~  232 (254)
                      .+|++++.++++++.++.++|++++.++||.+.|++.....         ......+...+.  ...-..++++++++++
T Consensus       150 ~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~  229 (276)
T PRK06482        150 ATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMI  229 (276)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999888643211         111111111111  1022468999999999


Q ss_pred             HHhcCCCcccceEEecCC
Q psy12833        233 SIITNPLINGEVIRIDGA  250 (254)
Q Consensus       233 ~l~~~~~~~G~~i~~~gG  250 (254)
                      ..+..+ ..+..+++.+|
T Consensus       230 ~~~~~~-~~~~~~~~g~~  246 (276)
T PRK06482        230 ASADQT-PAPRRLTLGSD  246 (276)
T ss_pred             HHHcCC-CCCeEEecChH
Confidence            998643 23455666554

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-33  Score=228.18  Aligned_cols=210  Identities=24%  Similarity=0.344  Sum_probs=183.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+++     +.+++++++|++|++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999988777665543     346889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|+........      .+.+.+++.+++|+.+++.+++.+.+.+.+.+      .++||++||..+..+.+.
T Consensus        82 id~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~  149 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGT------GKFWANKATAETNFVAALAQCEAAMEIFREQG------SGHLVLISSVSAVRGLPG  149 (248)
T ss_pred             CCEEEECCCcCCCCCcCc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCeEEEEeccccccCCCC
Confidence            999999999865544333      57888999999999999999999999998765      679999999998888774


Q ss_pred             -CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 -QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 -~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                       ...|+.+|++++.+++.++.++...+++++.++||+++|++......           . ....++++.|+.++..++.
T Consensus       150 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-----------~-~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        150 VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-----------T-PFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-----------C-CccCCHHHHHHHHHHHHhc
Confidence             68899999999999999999999899999999999999987643211           1 3457899999999998864

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=3.8e-33  Score=214.01  Aligned_cols=241  Identities=20%  Similarity=0.241  Sum_probs=205.1

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC---CCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG---PDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++||+|-.  +.|+..||+.|.++|+++.++..++ ++++-.+++.   .....++||+++.++++++++++.+++
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~   82 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW   82 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence            789999999954  5999999999999999999998876 4443333331   125679999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      |++|.+||+-+......+.  ....+.+-++|...+++...|...++|++.|.|..        .+.|+-++-..+.+..
T Consensus        83 g~lD~lVHsIaFa~k~el~--G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--------ggSiltLtYlgs~r~v  152 (259)
T COG0623          83 GKLDGLVHSIAFAPKEELK--GDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--------GGSILTLTYLGSERVV  152 (259)
T ss_pred             CcccEEEEEeccCChHHhC--CcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--------CCcEEEEEeccceeec
Confidence            9999999999987643221  12333789999999999999999999999999987        5899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |.+...+.+|++|+.-+|.||.++.++|||||+++-|+++|=-...+.  ..+.+...+.-|. ++..++|||.....||
T Consensus       153 PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl-~r~vt~eeVG~tA~fL  231 (259)
T COG0623         153 PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL-RRNVTIEEVGNTAAFL  231 (259)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc-cCCCCHHHhhhhHHHH
Confidence            999999999999999999999999999999999999999995444332  3444556666777 9999999999999999


Q ss_pred             hcC--CCcccceEEecCCcccC
Q psy12833        235 ITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      +|+  .-+||+++.||+|+++.
T Consensus       232 lSdLssgiTGei~yVD~G~~i~  253 (259)
T COG0623         232 LSDLSSGITGEIIYVDSGYHIM  253 (259)
T ss_pred             hcchhcccccceEEEcCCceee
Confidence            984  78999999999999863

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-33  Score=230.53  Aligned_cols=220  Identities=26%  Similarity=0.423  Sum_probs=185.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++++|||||+++||++++++|+++|++|++++|+....++..+++   +.++.++.+|++|++++.++++++.+.++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999987766665544   55788899999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      ++|||+|......+.+      . +.+++++.+++|+.+++.+++.+.+.|.+.       .+++|++||..+..+.++.
T Consensus        81 ~vi~~ag~~~~~~~~~------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~  147 (263)
T PRK06181         81 ILVNNAGITMWSRFDE------LTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-------RGQIVVVSSLAGLTGVPTR  147 (263)
T ss_pred             EEEECCCcccccchhc------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-------CCEEEEEecccccCCCCCc
Confidence            9999999765554444      5 788999999999999999999999998764       4799999999999998889


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCC-CCCCCCHHHHHHHHHHHhcC
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA-PQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~~~  237 (254)
                      ..|+.+|++++.+++.++.++...++++++++||+++|++............ ...+. ..++++|+|+|+.+.++++.
T Consensus       148 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        148 SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPL-GKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccccc-ccccccccCCCCHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999999999999998653221100100 11111 14678999999999999974

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.9e-33  Score=224.43  Aligned_cols=230  Identities=22%  Similarity=0.344  Sum_probs=191.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++|+++||||+++||.++++.|+++|++|++++|+.++.+++..++.  .++++++||++|++++.++++++...++++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            568999999999999999999999999999999999887776655442  368899999999999999999999888999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQSG  158 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~~~  158 (254)
                      |.+|+|+|......+        .+.++++..+++|+.+++.+.+.++|.+.+        .+++|++||..+. .+.++
T Consensus        83 d~ii~~ag~~~~~~~--------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~  146 (238)
T PRK05786         83 DGLVVTVGGYVEDTV--------EEFSGLEEMLTNHIKIPLYAVNASLRFLKE--------GSSIVLVSSMSGIYKASPD  146 (238)
T ss_pred             CEEEEcCCCcCCCch--------HHHHHHHHHHHHhchHHHHHHHHHHHHHhc--------CCEEEEEecchhcccCCCC
Confidence            999999986543222        234889999999999999999999998854        4789999998764 45677


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      ...|+.+|++++.+++.++.++...|++++.++||+++|++...  ... +   ...+......+++++++.+.++++. 
T Consensus       147 ~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~--~~~-~---~~~~~~~~~~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        147 QLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE--RNW-K---KLRKLGDDMAPPEDFAKVIIWLLTDE  220 (238)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch--hhh-h---hhccccCCCCCHHHHHHHHHHHhccc
Confidence            78899999999999999999999999999999999999986421  111 1   1112213467999999999999964 


Q ss_pred             -CCcccceEEecCCccc
Q psy12833        238 -PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 -~~~~G~~i~~~gG~~~  253 (254)
                       .+++|+.+.+|||.+|
T Consensus       221 ~~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        221 ADWVDGVVIPVDGGARL  237 (238)
T ss_pred             ccCccCCEEEECCcccc
Confidence             4689999999999875

>KOG1209|consensus

Probab=100.00  E-value=1.4e-34  Score=219.32  Aligned_cols=186  Identities=25%  Similarity=0.306  Sum_probs=170.6

Q ss_pred             CCCcEEEEeCCC-ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHH-HcCCC
Q psy12833          2 LKGVVGLVTGGA-SGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKD-SFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas-~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~-~~~~i   79 (254)
                      -..|.+||||+| ||||.+++++|+++|+.|+.++|+.+.-.++..+.  ++..+.+|+++++++.++..++.+ .+|++
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~--gl~~~kLDV~~~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF--GLKPYKLDVSKPEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh--CCeeEEeccCChHHHHHHHHHHhhCCCCce
Confidence            356899999975 69999999999999999999999999888877654  478899999999999999999999 67899


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |+++||||..+..+..+      .+.++.+++|++|++|+++++|++...+.+.       .|.||+++|..+..|+|..
T Consensus        83 d~L~NNAG~~C~~Pa~d------~~i~ave~~f~vNvfG~irM~~a~~h~lika-------KGtIVnvgSl~~~vpfpf~  149 (289)
T KOG1209|consen   83 DLLYNNAGQSCTFPALD------ATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-------KGTIVNVGSLAGVVPFPFG  149 (289)
T ss_pred             EEEEcCCCCCccccccc------CCHHHHHhhhccceeeeehHHHHHHHHHHHc-------cceEEEecceeEEeccchh
Confidence            99999999988887777      8999999999999999999999999555555       5999999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM  202 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~  202 (254)
                      +.|.+||+|+..+++.|+.|++++||+|.++.||.+.|++...
T Consensus       150 ~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  150 SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             hhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            9999999999999999999999999999999999999987654

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-33  Score=225.62  Aligned_cols=222  Identities=19%  Similarity=0.240  Sum_probs=179.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHH-HHHHc---CCCcE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLL-CKDSF---GKLDV   81 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~-~~~~~---~~id~   81 (254)
                      ++|||||++|||++++++|+++|++|++++|+.+..  .....+.++.++++|++|.+++++++++ +.+.+   +++|+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            799999999999999999999999999999986532  2233356788999999999999998877 55544   37999


Q ss_pred             EEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||+|.... .++.+      .+.+++++.+++|+.+++.+++.+.+.|.++.      .++|+++||..+..+.+++.
T Consensus        81 ~v~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~  148 (243)
T PRK07023         81 LINNAGTVEPIGPLAT------LDAAAIARAVGLNVAAPLMLTAALAQAASDAA------ERRILHISSGAARNAYAGWS  148 (243)
T ss_pred             EEEcCcccCCCCcccc------CCHHHHHHHeeeeehHHHHHHHHHHHHhhccC------CCEEEEEeChhhcCCCCCch
Confidence            9999997543 22222      68899999999999999999999999998765      68999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH------HHHHHHHhcCCCCCCCCCHHHHHHH-HHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE------KVRNFLARSIPAPQRLGHPDEFAQL-VQS  233 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~va~~-~~~  233 (254)
                      .|+++|++++++++.++.+ .+.||+++.++||+++|++......      ...+.+....+. ++...|+|+|.. +.+
T Consensus       149 ~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~~  226 (243)
T PRK07023        149 VYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKAS-GALSTPEDAARRLIAY  226 (243)
T ss_pred             HHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhc-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999 7789999999999999997543211      112223344555 788999999995 556


Q ss_pred             HhcCCCcccc
Q psy12833        234 IITNPLINGE  243 (254)
Q Consensus       234 l~~~~~~~G~  243 (254)
                      +.++.+-.+-
T Consensus       227 l~~~~~~~~~  236 (243)
T PRK07023        227 LLSDDFGSTP  236 (243)
T ss_pred             HhccccCCCC
Confidence            6665543333

>KOG1611|consensus

Probab=100.00  E-value=5.8e-33  Score=212.73  Aligned_cols=227  Identities=22%  Similarity=0.255  Sum_probs=184.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-CCEEEE-eeCCCchhHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHH-
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVRE-GGRVVL-CDLPTSEGESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDS-   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~-g~~v~~-~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~-   75 (254)
                      |..|.++||||.+|||..++++|.+. |-++++ ++|+.+.+.+..+.   ...+++.+++|+++.++++++++++.+- 
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            45578999999999999999999865 566554 56667764332232   2678999999999999999999999997 


Q ss_pred             -cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCC-----CCCCcEEEEEec
Q psy12833         76 -FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNE-----DGLRGVIINTAS  149 (254)
Q Consensus        76 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~ii~vss  149 (254)
                       ..++|++|+|||+.....     ...+.+.+.|.+++++|..|++.++|+++|++++.....     .-.+..|||+||
T Consensus        81 g~~GlnlLinNaGi~~~y~-----~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS  155 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYN-----TVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISS  155 (249)
T ss_pred             ccCCceEEEeccceeeecc-----cccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeec
Confidence             458999999999865432     222257788999999999999999999999999876331     122457999999


Q ss_pred             cccccC---CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHH
Q psy12833        150 IAAYEG---QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       150 ~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (254)
                      .++-.+   ..++.+|.+||+|+++|+|+++.|+++.+|-|.++||||+.|+|...                ...+++||
T Consensus       156 ~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~----------------~a~ltvee  219 (249)
T KOG1611|consen  156 SAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK----------------KAALTVEE  219 (249)
T ss_pred             cccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC----------------Ccccchhh
Confidence            776643   24578999999999999999999999999999999999999998641                55678999


Q ss_pred             HHHHHHHHhc--CCCcccceEEecC
Q psy12833        227 FAQLVQSIIT--NPLINGEVIRIDG  249 (254)
Q Consensus       227 va~~~~~l~~--~~~~~G~~i~~~g  249 (254)
                      -+..++..+.  ++.-||-+++-||
T Consensus       220 Sts~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  220 STSKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             hHHHHHHHHHhcCcccCcceEccCC
Confidence            9999998886  4667898888776

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=222.91  Aligned_cols=207  Identities=20%  Similarity=0.263  Sum_probs=179.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |+++||||++|||++++++|+++|++|++++|+.++.++..+++    +.++.+++||++|+++++++++++.+   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999988776665544    45789999999999999999998865   479


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|........+      .+.+++.+.+++|+.+++++++.+.|.|.+++      .++++++||..+..+.++..
T Consensus        79 ~vv~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~  146 (243)
T PRK07102         79 IVLIAVGTLGDQAACE------ADPALALREFRTNFEGPIALLTLLANRFEARG------SGTIVGISSVAGDRGRASNY  146 (243)
T ss_pred             EEEECCcCCCCccccc------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC------CCEEEEEecccccCCCCCCc
Confidence            9999999755443333      68899999999999999999999999998776      68999999999988888889


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      .|+.+|+++++++++++.|+.+.||++++++||.++|++....          ..+. ....+|+++|+.+..+++.
T Consensus       147 ~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~----------~~~~-~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        147 VYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL----------KLPG-PLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc----------CCCc-cccCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999865321          1122 4567899999999999974

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=4.2e-32  Score=229.45  Aligned_cols=234  Identities=18%  Similarity=0.210  Sum_probs=182.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.++++++++++.+.+++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999999999999988887777665   346889999999999999999998887788


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc----
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE----  154 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~----  154 (254)
                      +|++|||||+......     ..+.+.++++..+++|+.+++++++.++|.|.+++..    .++||++||.....    
T Consensus        84 iD~li~nAg~~~~~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~----~~riV~vsS~~~~~~~~~  154 (322)
T PRK07453         84 LDALVCNAAVYMPLLK-----EPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP----DPRLVILGTVTANPKELG  154 (322)
T ss_pred             ccEEEECCcccCCCCC-----CCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC----CceEEEEcccccCccccC
Confidence            9999999997532111     1125889999999999999999999999999876410    25999999965421    


Q ss_pred             -------------------------------CCCCCccchhchHHHHHhHHHHHHHhc-cCCcEEEEEecCCc-cccccc
Q psy12833        155 -------------------------------GQSGQVAYSASKSGIVGMTLPMARDLA-GAGIRVNTIAPGLF-DTPLLS  201 (254)
Q Consensus       155 -------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~~-~t~~~~  201 (254)
                                                     +..+...|+.||.+...+++.+++++. ..||++++++||.+ .|++.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~  234 (322)
T PRK07453        155 GKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFR  234 (322)
T ss_pred             CccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccc
Confidence                                           112356899999999999999999995 46999999999999 588765


Q ss_pred             cchHH---HHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC--CcccceEE
Q psy12833        202 MLNEK---VRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--LINGEVIR  246 (254)
Q Consensus       202 ~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~--~~~G~~i~  246 (254)
                      .....   ....+.... . ....++++.+..+++++.++  ..+|..+.
T Consensus       235 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        235 NTPPLFQKLFPWFQKNI-T-GGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             cCCHHHHHHHHHHHHHH-h-hceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            43221   111111111 1 33467888888888888543  34777775

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-32  Score=218.90  Aligned_cols=223  Identities=32%  Similarity=0.425  Sum_probs=188.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +.+++++||||+|+||++++++|+++|++|++++|+.+.+++..+++.  .+++++++|++|+++++++++++.+.++++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999999887777766663  568899999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||+|.....++.+      .+.+++++.+++|+.+++.+++++++.+.+.       .++||++||..+..+.++.
T Consensus        84 d~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~~~  150 (237)
T PRK07326         84 DVLIANAGVGHFAPVEE------LTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-------GGYIINISSLAGTNFFAGG  150 (237)
T ss_pred             CEEEECCCCCCCCchhh------CCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-------CeEEEEECChhhccCCCCC
Confidence            99999998765444444      7889999999999999999999999988432       5799999999988888888


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-C
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-P  238 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~  238 (254)
                      ..|+.+|+++.++++.++.|+...|+++++++||++.|++......+.         . ....+++|+++.+++++.. +
T Consensus       151 ~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~---------~-~~~~~~~d~a~~~~~~l~~~~  220 (237)
T PRK07326        151 AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK---------D-AWKIQPEDIAQLVLDLLKMPP  220 (237)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh---------h-hccCCHHHHHHHHHHHHhCCc
Confidence            899999999999999999999999999999999999998754322110         0 2236899999999999964 3


Q ss_pred             CcccceEEe
Q psy12833        239 LINGEVIRI  247 (254)
Q Consensus       239 ~~~G~~i~~  247 (254)
                      ...+..+++
T Consensus       221 ~~~~~~~~~  229 (237)
T PRK07326        221 RTLPSKIEV  229 (237)
T ss_pred             cccccceEE
Confidence            444444444

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-32  Score=251.61  Aligned_cols=215  Identities=26%  Similarity=0.323  Sum_probs=185.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  448 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH  448 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            56899999999999999999999999999999999988877776655   567889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||......+....    .+.+++++.+++|+.+++.+++.++|.|.++.      .++||++||..+..+.++
T Consensus       449 id~li~~Ag~~~~~~~~~~~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  518 (657)
T PRK07201        449 VDYLVNNAGRSIRRSVENST----DRFHDYERTMAVNYFGAVRLILGLLPHMRERR------FGHVVNVSSIGVQTNAPR  518 (657)
T ss_pred             CCEEEECCCCCCCCChhhcC----CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC------CCEEEEECChhhcCCCCC
Confidence            99999999975433322210    23578999999999999999999999998775      689999999999999898


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ...|+++|+++++|+++++.|+.++||+|++++||+++|++......         ... ....+||++|+.++..+.
T Consensus       519 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~---------~~~-~~~~~~~~~a~~i~~~~~  586 (657)
T PRK07201        519 FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR---------YNN-VPTISPEEAADMVVRAIV  586 (657)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc---------ccC-CCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998653210         111 345789999999999874

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=220.79  Aligned_cols=204  Identities=21%  Similarity=0.210  Sum_probs=173.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++++||||++|||++++++|+++|++|++++|+.+.++++.++ ..++.+++||++|+++++++++++..   .+|++|+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLPF---IPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEEE
Confidence            6899999999999999999999999999999998777666544 35688999999999999999987743   5799999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchh
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA  164 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~  164 (254)
                      |+|........      +.+.+++++.+++|+.+++++++.+.|.|.+        .++|+++||..+..+.++...|++
T Consensus        78 ~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~a  143 (240)
T PRK06101         78 NAGDCEYMDDG------KVDATLMARVFNVNVLGVANCIEGIQPHLSC--------GHRVVIVGSIASELALPRAEAYGA  143 (240)
T ss_pred             cCcccccCCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--------CCeEEEEechhhccCCCCCchhhH
Confidence            99864322221      2688999999999999999999999999854        468999999999999889999999


Q ss_pred             chHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +|+++++|++.++.|+.++|+++++++||+++|++.....          ... ....+++++|+.++..+..
T Consensus       144 sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~----------~~~-~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        144 SKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT----------FAM-PMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC----------CCC-CcccCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999998764311          111 2346899999999988864

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=7e-32  Score=219.12  Aligned_cols=199  Identities=25%  Similarity=0.298  Sum_probs=164.1

Q ss_pred             HHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCC
Q psy12833         20 TVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNK   99 (254)
Q Consensus        20 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   99 (254)
                      ++++|+++|++|++++|+.++.+        ...+++||++|.++++++++++.   +++|++|||||...         
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~--------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~---------   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT--------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG---------   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh--------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC---------
Confidence            47889999999999999876542        13468999999999999998874   58999999999642         


Q ss_pred             CCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-------------------------
Q psy12833        100 GTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-------------------------  154 (254)
Q Consensus       100 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-------------------------  154 (254)
                           .++++..+++|+.+++.+++.++|.|.+        .++||++||..+..                         
T Consensus        61 -----~~~~~~~~~vN~~~~~~l~~~~~~~~~~--------~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (241)
T PRK12428         61 -----TAPVELVARVNFLGLRHLTEALLPRMAP--------GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLA  127 (241)
T ss_pred             -----CCCHHHhhhhchHHHHHHHHHHHHhccC--------CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhh
Confidence                 1247889999999999999999998853        47999999998863                         


Q ss_pred             --CCCCCccchhchHHHHHhHHHHH-HHhccCCcEEEEEecCCccccccccchHHHH-HHH-HhcCCCCCCCCCHHHHHH
Q psy12833        155 --GQSGQVAYSASKSGIVGMTLPMA-RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR-NFL-ARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       155 --~~~~~~~Y~~sK~a~~~~~~~la-~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~va~  229 (254)
                        +.++...|++||++++++++.++ .|++++||+||+|+||.++|++.....+... +.. ....|. ++..+|||+|+
T Consensus       128 ~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~  206 (241)
T PRK12428        128 AHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRM-GRPATADEQAA  206 (241)
T ss_pred             ccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhccccc-CCCCCHHHHHH
Confidence              55677899999999999999999 9999999999999999999998754322111 111 122355 78889999999


Q ss_pred             HHHHHhcC--CCcccceEEecCCcc
Q psy12833        230 LVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       230 ~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      .+.+++++  .+++|+.+.+|||+.
T Consensus       207 ~~~~l~s~~~~~~~G~~i~vdgg~~  231 (241)
T PRK12428        207 VLVFLCSDAARWINGVNLPVDGGLA  231 (241)
T ss_pred             HHHHHcChhhcCccCcEEEecCchH
Confidence            99999974  689999999999975

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=1.5e-31  Score=205.15  Aligned_cols=160  Identities=31%  Similarity=0.504  Sum_probs=145.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCC--CchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG-RVVLCDLP--TSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+++||||++|||++++++|+++|+ .|++++|+  .+..+++.+++   +.++++++||++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999966 78889998  56666665554   678899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||+|.....++.+      .+.+++++.+++|+.+++++.+.+.|    ++      .++||++||..+..|.|+
T Consensus        81 ld~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~----~~------~g~iv~~sS~~~~~~~~~  144 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDD------LSEEELERVFRVNLFGPFLLAKALLP----QG------GGKIVNISSIAGVRGSPG  144 (167)
T ss_dssp             ESEEEEECSCTTSBSGGG------SHHHHHHHHHHHHTHHHHHHHHHHHH----HT------TEEEEEEEEGGGTSSSTT
T ss_pred             cccccccccccccccccc------ccchhhhhccccccceeeeeeehhee----cc------ccceEEecchhhccCCCC
Confidence            999999999987666666      78999999999999999999999999    22      699999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHh
Q psy12833        159 QVAYSASKSGIVGMTLPMARDL  180 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~  180 (254)
                      +..|+++|+|+++|+++++.|+
T Consensus       145 ~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  145 MSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999997

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1014|consensus

Probab=100.00  E-value=3.3e-32  Score=218.76  Aligned_cols=184  Identities=26%  Similarity=0.334  Sum_probs=163.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc--C
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF--G   77 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~   77 (254)
                      |+.++|||||.|||++.+++||++|.+|++++|++++++.+++|+    +..++++.+|.++.+++   .+.+.+..  .
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l~~~  125 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKLAGL  125 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHhcCC
Confidence            588999999999999999999999999999999999999999887    55688999999998873   33333332  2


Q ss_pred             CCcEEEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         78 KLDVNVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        78 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      .+.++|||+|....  ..+.+      .+.+.++..+.+|..++..+++.++|.|.+++      .|.|++++|.++..|
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~------~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~------~G~IvnigS~ag~~p  193 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLK------YPEGELQNIINVNILSVTLLTQLILPGMVERK------KGIIVNIGSFAGLIP  193 (312)
T ss_pred             ceEEEEecccccCCCcHHHHh------CchhhhhheeEEecchHHHHHHHhhhhhhcCC------CceEEEecccccccc
Confidence            68899999998763  33333      67778999999999999999999999999977      899999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM  202 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~  202 (254)
                      .|.++.|+++|+.++.|+++|++||.++||.|-++.|..+.|+|...
T Consensus       194 ~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  194 TPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            99999999999999999999999999999999999999999998754

>KOG1210|consensus

Probab=99.98  E-value=4.4e-31  Score=211.96  Aligned_cols=220  Identities=27%  Similarity=0.305  Sum_probs=192.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC-----CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG-----PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +.++|||+|+|||.+++.++..+|++|.++.|+.+++.+++.+++     ..+.+..+|+.|.+++...++++....+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            589999999999999999999999999999999999999998772     226689999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |.+|+|||...++.+.+      .+++.++..+++|+++.++.+++.++.|++..     +.|+|+.+||..+..+..++
T Consensus       114 d~l~~cAG~~v~g~f~~------~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~-----~~g~I~~vsS~~a~~~i~Gy  182 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFED------LSPEVVEKLMDVNYLGTVNVAKAAARAMKKRE-----HLGRIILVSSQLAMLGIYGY  182 (331)
T ss_pred             ceEEEecCccccccccc------CCHHHHHHHHHhhhhhhHHHHHHHHHHhhccc-----cCcEEEEehhhhhhcCcccc
Confidence            99999999998888877      89999999999999999999999999998764     14699999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++|+++|+|+.+++.++++|+.++||.|..+.|+.++||.++.-+.. ..+....+.......++||+|.++..-+.
T Consensus       183 saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~t-kP~~t~ii~g~ss~~~~e~~a~~~~~~~~  258 (331)
T KOG1210|consen  183 SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKT-KPEETKIIEGGSSVIKCEEMAKAIVKGMK  258 (331)
T ss_pred             cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccccc-CchheeeecCCCCCcCHHHHHHHHHhHHh
Confidence            99999999999999999999999999999999999999976542210 11111222233566899999999887764

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.8e-30  Score=212.55  Aligned_cols=217  Identities=23%  Similarity=0.313  Sum_probs=175.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+++.+..   +.++.++.+|++|++++.+++.      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            579999999999999999999999999999999877666554432   4568899999999998887654      3799


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....+..+      .+.+++++.+++|+.+++.+++.+++.+.++.      .++||++||..+..+.++..
T Consensus        76 ~vi~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~~SS~~~~~~~~~~~  143 (257)
T PRK09291         76 VLLNNAGIGEAGAVVD------IPVELVRELFETNVFGPLELTQGFVRKMVARG------KGKVVFTSSMAGLITGPFTG  143 (257)
T ss_pred             EEEECCCcCCCcCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CceEEEEcChhhccCCCCcc
Confidence            9999999875544444      78999999999999999999999999998765      57999999999888888888


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHH-------HHH-hcCCCCCCCCCHHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN-------FLA-RSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~va~~~~  232 (254)
                      .|+++|++++.+++.++.++.+.||++++++||++.|++.....+....       .+. .....+....++++++..+.
T Consensus       144 ~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (257)
T PRK09291        144 AYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMV  223 (257)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999875432211110       000 00111133468999999999


Q ss_pred             HHhcCC
Q psy12833        233 SIITNP  238 (254)
Q Consensus       233 ~l~~~~  238 (254)
                      .++.++
T Consensus       224 ~~l~~~  229 (257)
T PRK09291        224 EVIPAD  229 (257)
T ss_pred             HHhcCC
Confidence            888643

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.7e-30  Score=208.84  Aligned_cols=215  Identities=19%  Similarity=0.253  Sum_probs=172.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |+++||||++|||++++++|+++|++|++++|+.+..+++.+ . .++.++.+|++|+++++++++.+.+  +++|++||
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c-cccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEE
Confidence            689999999999999999999999999999999877655432 2 3678889999999999999998864  48999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC---CCCcc
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ---SGQVA  161 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~---~~~~~  161 (254)
                      |+|......    ....+.+.+++++.+++|+.+++.+++.+++.+.+.       .++++++||..+..+.   .++..
T Consensus        78 ~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~~iv~~ss~~g~~~~~~~~~~~~  146 (225)
T PRK08177         78 NAGISGPAH----QSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-------QGVLAFMSSQLGSVELPDGGEMPL  146 (225)
T ss_pred             cCcccCCCC----CCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-------CCEEEEEccCccccccCCCCCccc
Confidence            999864321    111226889999999999999999999999988653       4789999997765543   35678


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-CCc
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-PLI  240 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~~~  240 (254)
                      |+++|++++.|++.++.|+.++||++++++||+++|++...                ....++++.+..++..+.. ...
T Consensus       147 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~  210 (225)
T PRK08177        147 YKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD----------------NAPLDVETSVKGLVEQIEAASGK  210 (225)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC----------------CCCCCHHHHHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999998531                1124678888888888753 323


Q ss_pred             ccce-EEecCC
Q psy12833        241 NGEV-IRIDGA  250 (254)
Q Consensus       241 ~G~~-i~~~gG  250 (254)
                      .|+. ++.+|+
T Consensus       211 ~~~~~~~~~~~  221 (225)
T PRK08177        211 GGHRFIDYQGE  221 (225)
T ss_pred             CCCceeCcCCc
Confidence            3343 444543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.98  E-value=3.9e-30  Score=208.32  Aligned_cols=201  Identities=28%  Similarity=0.384  Sum_probs=171.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++++++||||+++||++++++|+++|+ +|++++|+.++.++    .+.++.++.+|++|+++++++++.    ++++|
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~----~~~id   75 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEA----ASDVT   75 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHh----cCCCC
Confidence            4689999999999999999999999999 99999998776544    456789999999999999888775    36799


Q ss_pred             EEEeCCccC-CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         81 VNVNCAGIS-CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        81 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      ++||++|.. ....+.+      .+.+++++.+++|+.+++.+++++.+.+.+..      .++++++||..+..+.++.
T Consensus        76 ~vi~~ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~~v~~sS~~~~~~~~~~  143 (238)
T PRK08264         76 ILVNNAGIFRTGSLLLE------GDEDALRAEMETNYFGPLAMARAFAPVLAANG------GGAIVNVLSVLSWVNFPNL  143 (238)
T ss_pred             EEEECCCcCCCCCcccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCEEEEEcChhhccCCCCc
Confidence            999999983 3333333      68999999999999999999999999998765      6899999999999988899


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ..|+.+|++++.+++.++.++.+.|++++.++||.++|++....            +  +...+++++++.++..+.
T Consensus       144 ~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~------------~--~~~~~~~~~a~~~~~~~~  206 (238)
T PRK08264        144 GTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL------------D--APKASPADVARQILDALE  206 (238)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC------------C--cCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999875321            1  224567777777777664

>KOG1204|consensus

Probab=99.98  E-value=7.4e-32  Score=206.70  Aligned_cols=235  Identities=20%  Similarity=0.237  Sum_probs=192.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe--eCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLC--DLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~--~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      .+|++|+||+|+|||..++..+.+++......  .|.....+.+..+.++.......|++...-+.++.+...+.+++.|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            46889999999999999999888777655444  4444443333333455566667888888889999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||..++-....   ....+.++|++.+++|++|.+.+.+.++|.+++++     +++.++|+||.++..|+++|.
T Consensus        85 iiI~NAG~lgdvsk~~---~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p-----~~~~vVnvSS~aav~p~~~wa  156 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGA---VDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP-----VNGNVVNVSSLAAVRPFSSWA  156 (253)
T ss_pred             EEEecCCCccchhhcc---CCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC-----ccCeEEEecchhhhccccHHH
Confidence            9999999865532111   01268899999999999999999999999998874     268999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .||.+|+|.++|++.+|.|-. +++++.++.||.+||+|....      .++....+.+.... +++.+|...|+.+.+|
T Consensus       157 ~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~-~~ll~~~~~a~~l~~L  234 (253)
T KOG1204|consen  157 AYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES-GQLLDPQVTAKVLAKL  234 (253)
T ss_pred             HhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc-CCcCChhhHHHHHHHH
Confidence            999999999999999999976 899999999999999997443      35556666665556 8999999999999999


Q ss_pred             hcCC-CcccceEEe
Q psy12833        235 ITNP-LINGEVIRI  247 (254)
Q Consensus       235 ~~~~-~~~G~~i~~  247 (254)
                      +... +.+||.++-
T Consensus       235 ~e~~~f~sG~~vdy  248 (253)
T KOG1204|consen  235 LEKGDFVSGQHVDY  248 (253)
T ss_pred             HHhcCccccccccc
Confidence            9754 999998874

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=3.9e-30  Score=210.51  Aligned_cols=218  Identities=21%  Similarity=0.236  Sum_probs=180.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCCcEEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKLDVNV   83 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id~li   83 (254)
                      |+++||||+++||+++++.|+++|++|++++|+.++.+...+   .++++++||++|.+++.++++.+.... +++|.+|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS---LGFTGILLDLDDPESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh---CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            789999999999999999999999999999999877665532   247889999999999999999988754 6899999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      ||+|.....+..+      .+.+++++.+++|+.+++.+++.+++.+.+.+      .++|+++||..+..+.++...|+
T Consensus        80 ~~ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~------~~~iv~~ss~~~~~~~~~~~~Y~  147 (256)
T PRK08017         80 NNAGFGVYGPLST------ISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG------EGRIVMTSSVMGLISTPGRGAYA  147 (256)
T ss_pred             ECCCCCCccchhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC------CCEEEEEcCcccccCCCCccHHH
Confidence            9999765444333      68899999999999999999999999998765      57999999999998888899999


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHH--HHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV--RNFLARSIPAPQRLGHPDEFAQLVQSIITNP  238 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  238 (254)
                      .+|++++.++++++.++...+++++.++||.++|++........  .......... ....+|+|+++.+..+++++
T Consensus       148 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~~~  223 (256)
T PRK08017        148 ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAA-RFTLGPEAVVPKLRHALESP  223 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHh-hcCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999998765432110  0000000001 23579999999999999643

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-29  Score=204.36  Aligned_cols=197  Identities=17%  Similarity=0.174  Sum_probs=150.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|+++||||++|||++++++|+++|++|++++|+.....+.  .......++.+|++|.+++.+       .++++|+
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~-------~~~~iDi   82 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--NDESPNEWIKWECGKEESLDK-------QLASLDV   82 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hccCCCeEEEeeCCCHHHHHH-------hcCCCCE
Confidence            5789999999999999999999999999999999986322211  111223678999999987764       3468999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||....   .+      .+.+++++.+++|+.+++++++.++|.|.++...  . .+.+++.+|.++..+ +....
T Consensus        83 lVnnAG~~~~---~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~--~-g~~iiv~ss~a~~~~-~~~~~  149 (245)
T PRK12367         83 LILNHGINPG---GR------QDPENINKALEINALSSWRLLELFEDIALNNNSQ--I-PKEIWVNTSEAEIQP-ALSPS  149 (245)
T ss_pred             EEECCccCCc---CC------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccC--C-CeEEEEEecccccCC-CCCch
Confidence            9999997422   12      5789999999999999999999999999764210  0 234444556655544 35678


Q ss_pred             chhchHHHHHhH---HHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        162 YSASKSGIVGMT---LPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       162 Y~~sK~a~~~~~---~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      |++||+|+..+.   +.++.|+...+++++.++||.++|++.               +  ...++|||+|+.+++.++.
T Consensus       150 Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~---------------~--~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        150 YEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN---------------P--IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC---------------c--cCCCCHHHHHHHHHHHHhc
Confidence            999999986543   455556677899999999999999762               1  2356899999999999964

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4e-29  Score=200.83  Aligned_cols=221  Identities=24%  Similarity=0.360  Sum_probs=181.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      .|++|||||+++||+++++.|+++ ++|++++|+.+..+++.++. ..++++++|++|+++++++++.+    +++|++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~----~~id~vi   76 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-PGATPFPVDLTDPEAIAAAVEQL----GRLDVLV   76 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-ccceEEecCCCCHHHHHHHHHhc----CCCCEEE
Confidence            479999999999999999999999 99999999877766555443 35889999999999998888754    4799999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      |++|.....+..+      .+.+++.+.+++|+.+.+.+++.+++.+.++       .++++++||..+..+.++...|+
T Consensus        77 ~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~~~v~~ss~~~~~~~~~~~~y~  143 (227)
T PRK08219         77 HNAGVADLGPVAE------STVDEWRATLEVNVVAPAELTRLLLPALRAA-------HGHVVFINSGAGLRANPGWGSYA  143 (227)
T ss_pred             ECCCcCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-------CCeEEEEcchHhcCcCCCCchHH
Confidence            9999765443333      6889999999999999999999999988876       47899999999988888889999


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccc
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGE  243 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~  243 (254)
                      .+|++++++++.++.++... +++++++||.+++++........    ....+. +++++++|+|+.++++++.+ ..|+
T Consensus       144 ~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~----~~~~~~-~~~~~~~dva~~~~~~l~~~-~~~~  216 (227)
T PRK08219        144 ASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE----GGEYDP-ERYLRPETVAKAVRFAVDAP-PDAH  216 (227)
T ss_pred             HHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh----ccccCC-CCCCCHHHHHHHHHHHHcCC-CCCc
Confidence            99999999999999998776 99999999999987654322111    111223 67899999999999999754 3577


Q ss_pred             eEEecCC
Q psy12833        244 VIRIDGA  250 (254)
Q Consensus       244 ~i~~~gG  250 (254)
                      +++++.+
T Consensus       217 ~~~~~~~  223 (227)
T PRK08219        217 ITEVVVR  223 (227)
T ss_pred             cceEEEe
Confidence            7776543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.9e-29  Score=200.54  Aligned_cols=212  Identities=18%  Similarity=0.229  Sum_probs=172.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |+++||||+++||++++++|+++|++|++++|+.+..+++..   ..+.++.+|++|.++++++++++..  +++|++||
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA---LGAEALALDVADPASVAGLAWKLDG--EALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh---ccceEEEecCCCHHHHHHHHHHhcC--CCCCEEEE
Confidence            689999999999999999999999999999998777665543   2467899999999999998877643  47999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC---cc
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ---VA  161 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~---~~  161 (254)
                      |+|......    ....+.+.++++..+++|+.+++++++++.|.|.+.       .+++++++|..+..+....   ..
T Consensus        77 ~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~~~~  145 (222)
T PRK06953         77 VAGVYGPRT----EGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-------GGVLAVLSSRMGSIGDATGTTGWL  145 (222)
T ss_pred             CCCcccCCC----CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-------CCeEEEEcCcccccccccCCCccc
Confidence            999753211    011126899999999999999999999999988654       4789999998776553322   36


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |+++|++++++++.++.++.  ++++++++||+++|++...                ....++++.+..++.+++  .+.
T Consensus       146 Y~~sK~a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~  207 (222)
T PRK06953        146 YRASKAALNDALRAASLQAR--HATCIALHPGWVRTDMGGA----------------QAALDPAQSVAGMRRVIAQATRR  207 (222)
T ss_pred             cHHhHHHHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCC----------------CCCCCHHHHHHHHHHHHHhcCcc
Confidence            99999999999999998863  7999999999999997531                223578999999999875  356


Q ss_pred             cccceEEecCC
Q psy12833        240 INGEVIRIDGA  250 (254)
Q Consensus       240 ~~G~~i~~~gG  250 (254)
                      .+|++++.|++
T Consensus       208 ~~~~~~~~~~~  218 (222)
T PRK06953        208 DNGRFFQYDGV  218 (222)
T ss_pred             cCceEEeeCCc
Confidence            78899988875

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=1.3e-26  Score=199.08  Aligned_cols=196  Identities=21%  Similarity=0.223  Sum_probs=150.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||+++||||++|||++++++|+++|++|++++|+.+++++..++...++..+.+|++|++++.+.+       +++|+
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l-------~~IDi  248 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL-------EKVDI  248 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh-------CCCCE
Confidence            57899999999999999999999999999999999876655433333345678899999998876544       48999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....   +      .+.+++++.+++|+.+++.++++++|.|.+++..  ...+.++++|+ +. ...+..+.
T Consensus       249 LInnAGi~~~~---~------~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~--~~~~iiVn~Ss-a~-~~~~~~~~  315 (406)
T PRK07424        249 LIINHGINVHG---E------RTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK--ATKEVWVNTSE-AE-VNPAFSPL  315 (406)
T ss_pred             EEECCCcCCCC---C------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCeEEEEEcc-cc-ccCCCchH
Confidence            99999975321   2      6889999999999999999999999999875310  01234566654 33 33345568


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      |++||+|+.+++. +.++.  .++.+..++||.++|++.               |  ....+||++|+.+++.++.
T Consensus       316 Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~---------------~--~~~~spe~vA~~il~~i~~  371 (406)
T PRK07424        316 YELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLN---------------P--IGVMSADWVAKQILKLAKR  371 (406)
T ss_pred             HHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCC---------------c--CCCCCHHHHHHHHHHHHHC
Confidence            9999999999974 44443  457777889999988752               1  2346999999999999964

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=1.6e-25  Score=224.29  Aligned_cols=223  Identities=18%  Similarity=0.219  Sum_probs=171.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCc------------------------------------------
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTS------------------------------------------   39 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~------------------------------------------   39 (254)
                      +|+++|||||++|||++++++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999988 699999999820                                          


Q ss_pred             -----hhHHHH---HHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHH
Q psy12833         40 -----EGESVA---KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRI  111 (254)
Q Consensus        40 -----~~~~~~---~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~  111 (254)
                           +.....   ++.+.++.++.||++|.++++++++++.+. +++|+||||||+.....+.+      .+.++|++.
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~------~t~e~f~~v 2148 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQD------KTLEEFNAV 2148 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCccc------CCHHHHHHH
Confidence                 000111   123667889999999999999999999887 68999999999876555555      799999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEe
Q psy12833        112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIA  191 (254)
Q Consensus       112 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~  191 (254)
                      +++|+.|.+++++++.+.+          .++||++||..++.+.+++..|+++|++++.+++.++.++.  +++|++++
T Consensus      2149 ~~~nv~G~~~Ll~al~~~~----------~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~ 2216 (2582)
T TIGR02813      2149 YGTKVDGLLSLLAALNAEN----------IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFN 2216 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHhC----------CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEE
Confidence            9999999999988887643          35799999999999999999999999999999999999875  48999999


Q ss_pred             cCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        192 PGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       192 Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      ||+.+|+|...   ...+.+.+.  . -..++++.-+...+.-+..+  +|..+.+++|++
T Consensus      2217 wG~wdtgm~~~---~l~~~~~~r--g-~~~ipl~ag~~~f~~eL~s~--~g~~v~Vg~~~~ 2269 (2582)
T TIGR02813      2217 WGPWDGGMVNP---ALKKMFNDR--G-VYVIPLDAGAELFVSQLLSD--TGAQLLVGTDMQ 2269 (2582)
T ss_pred             CCeecCCccch---hHHHHHHhc--c-cccCCCchhHHHhHHHhcCC--CCCEEEECCCCc
Confidence            99999988632   222222211  0 11234443333332223222  567777877653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.94  E-value=3.3e-25  Score=194.92  Aligned_cols=219  Identities=16%  Similarity=0.191  Sum_probs=164.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------------CCCceEEecCCCCHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------------GPDVKFAPVDVTSEEDVQKA   68 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------------~~~~~~~~~Dls~~~~~~~~   68 (254)
                      |.+||++|||||+|+||++++++|+++|++|++++|+.++++.+.+++            ..++.++.+|++|.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            357899999999999999999999999999999999988877665432            13578999999999987654


Q ss_pred             HHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEe
Q psy12833         69 VLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA  148 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vs  148 (254)
                      +       +++|+||||+|....            ...++...+++|+.+..++++++...    +      .++||++|
T Consensus       157 L-------ggiDiVVn~AG~~~~------------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g------VgRIV~VS  207 (576)
T PLN03209        157 L-------GNASVVICCIGASEK------------EVFDVTGPYRIDYLATKNLVDAATVA----K------VNHFILVT  207 (576)
T ss_pred             h-------cCCCEEEEccccccc------------cccchhhHHHHHHHHHHHHHHHHHHh----C------CCEEEEEc
Confidence            4       479999999986421            12246778899999999998887653    2      47999999


Q ss_pred             ccccc-cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHH
Q psy12833        149 SIAAY-EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEF  227 (254)
Q Consensus       149 s~~~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  227 (254)
                      |..+. .+.+.. .|. +|+++..+.+.+..++...||+++.|+||++++++.+..............+. ++.++.+||
T Consensus       208 Siga~~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~-gr~isreDV  284 (576)
T PLN03209        208 SLGTNKVGFPAA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLF-GGQVSNLQV  284 (576)
T ss_pred             cchhcccCcccc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccC-CCccCHHHH
Confidence            98764 233222 244 78888888899999999999999999999998875432111000111112334 778899999


Q ss_pred             HHHHHHHhcCC-CcccceEEecCCc
Q psy12833        228 AQLVQSIITNP-LINGEVIRIDGAL  251 (254)
Q Consensus       228 a~~~~~l~~~~-~~~G~~i~~~gG~  251 (254)
                      |+.++++++++ ...++++.+-.|.
T Consensus       285 A~vVvfLasd~~as~~kvvevi~~~  309 (576)
T PLN03209        285 AELMACMAKNRRLSYCKVVEVIAET  309 (576)
T ss_pred             HHHHHHHHcCchhccceEEEEEeCC
Confidence            99999999854 4668888875543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.94  E-value=2.3e-24  Score=182.25  Aligned_cols=213  Identities=16%  Similarity=0.179  Sum_probs=160.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |++||++|||||+|+||++++++|+++|  ++|++.+|+.....++..++ ..++.++.+|++|++++.++++       
T Consensus         1 ~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------   73 (324)
T TIGR03589         1 MFNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------   73 (324)
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------
Confidence            6899999999999999999999999986  78999998766554444444 2468899999999999888775       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++||+||.... +.         ...+..+.+++|+.++.++++++.+.    .      .++||++||.....|  
T Consensus        74 ~iD~Vih~Ag~~~~-~~---------~~~~~~~~~~~Nv~g~~~ll~aa~~~----~------~~~iV~~SS~~~~~p--  131 (324)
T TIGR03589        74 GVDYVVHAAALKQV-PA---------AEYNPFECIRTNINGAQNVIDAAIDN----G------VKRVVALSTDKAANP--  131 (324)
T ss_pred             cCCEEEECcccCCC-ch---------hhcCHHHHHHHHHHHHHHHHHHHHHc----C------CCEEEEEeCCCCCCC--
Confidence            58999999996422 11         11223468999999999999998752    2      368999999765443  


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhc---CCC-----CCCCCCHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS---IPA-----PQRLGHPDEFAQ  229 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~va~  229 (254)
                       ...|+.+|++.+.+++.++.+....|+++++++||.+..+... ..+.+.......   ++.     ...+++++|+++
T Consensus       132 -~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~  209 (324)
T TIGR03589       132 -INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVN  209 (324)
T ss_pred             -CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHH
Confidence             4579999999999999998888889999999999999886432 222222222222   121     023689999999


Q ss_pred             HHHHHhcCCCcccceE
Q psy12833        230 LVQSIITNPLINGEVI  245 (254)
Q Consensus       230 ~~~~l~~~~~~~G~~i  245 (254)
                      +++.++... ..|+++
T Consensus       210 a~~~al~~~-~~~~~~  224 (324)
T TIGR03589       210 FVLKSLERM-LGGEIF  224 (324)
T ss_pred             HHHHHHhhC-CCCCEE
Confidence            999998653 246666

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1478|consensus

Probab=99.92  E-value=1.1e-24  Score=169.70  Aligned_cols=226  Identities=27%  Similarity=0.302  Sum_probs=181.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-----EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG-----RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~-----~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      .|++||||+++|||.+++.+|.+...     ++++++|+.+++++++.++       ..++.++.+|+||..|+.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            38999999999999999999986643     5788999999999999876       34578899999999999999999


Q ss_pred             HHHHcCCCcEEEeCCccCCCcccc----------c-----------cCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy12833         72 CKDSFGKLDVNVNCAGISCAFKIF----------N-----------YNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLI  130 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~----------~-----------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  130 (254)
                      +.+.+.++|.++.|||++....+.          +           .......+.+++...|+.|++|++.+.+.+.|.+
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            999999999999999987654431          0           0122246889999999999999999999999999


Q ss_pred             HhccCCCCCCCcEEEEEeccccccC---------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc
Q psy12833        131 HENKLNEDGLRGVIINTASIAAYEG---------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS  201 (254)
Q Consensus       131 ~~~~~~~~~~~~~ii~vss~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~  201 (254)
                      ....      +..+|.+||..+...         ..+...|..||.+++-++-.+-+.+.+.|+....++||...|++..
T Consensus       163 ~~~~------~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~  236 (341)
T KOG1478|consen  163 CHSD------NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFS  236 (341)
T ss_pred             hcCC------CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhh
Confidence            8876      569999999887743         3567789999999999999999999999999999999999999886


Q ss_pred             cchHHHH------H-HHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        202 MLNEKVR------N-FLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       202 ~~~~~~~------~-~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      .+...+.      . ...+.+..|...++|=..|.+.+|+.
T Consensus       237 ~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~  277 (341)
T KOG1478|consen  237 EYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVT  277 (341)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhh
Confidence            6533221      1 12222333344456666666666665

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=1.6e-23  Score=161.40  Aligned_cols=172  Identities=22%  Similarity=0.321  Sum_probs=143.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHH------HHhCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVA------KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+++||||+++||++++++|+++|+ .|++++|+.+..+...      ++.+.++.++.+|++++++++++++++.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 6888888765433221      12356788899999999999999999999899


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||+|.........      .+.++++..+++|+.+++.+.+.+.+    ..      .++++++||..+..+.+
T Consensus        81 ~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~~~ii~~ss~~~~~~~~  144 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLAN------LTPERFAAVLAPKVDGAWNLHELTRD----LP------LDFFVLFSSVAGVLGNP  144 (180)
T ss_pred             CeeEEEEccccCCcccccc------CCHHHHHHhhchHhHHHHHHHHHhcc----CC------cceEEEEccHHHhcCCC
Confidence            9999999999764433333      68899999999999999999998732    22      57899999999998988


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcc
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFD  196 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~  196 (254)
                      ++..|+++|++++.+++.++    +.++++..+.||+++
T Consensus       145 ~~~~y~~sk~~~~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      145 GQANYAAANAFLDALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             CchhhHHHHHHHHHHHHHHH----hcCCceEEEeecccc
Confidence            99999999999999887653    468889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.92  E-value=7.5e-23  Score=174.88  Aligned_cols=225  Identities=17%  Similarity=0.100  Sum_probs=165.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++||++|||||+|+||+++++.|+++|++|++++|+..........+  ..++.++.+|++|.+++.+++++.     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            67899999999999999999999999999999999876544333222  346778999999999999988865     68


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-----
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-----  154 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-----  154 (254)
                      |++||+|+....    .      .+.+++...+++|+.+.+++++++...   ..      .+++|++||...+.     
T Consensus        77 d~vih~A~~~~~----~------~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~------~~~iv~~SS~~vyg~~~~~  137 (349)
T TIGR02622        77 EIVFHLAAQPLV----R------KSYADPLETFETNVMGTVNLLEAIRAI---GS------VKAVVNVTSDKCYRNDEWV  137 (349)
T ss_pred             CEEEECCccccc----c------cchhCHHHHHHHhHHHHHHHHHHHHhc---CC------CCEEEEEechhhhCCCCCC
Confidence            999999985321    1      345667788999999999999987431   11      35899999964332     


Q ss_pred             -------CCCCCccchhchHHHHHhHHHHHHHhcc----CCcEEEEEecCCccccccc---cchHHHHHHHHhcCC----
Q psy12833        155 -------GQSGQVAYSASKSGIVGMTLPMARDLAG----AGIRVNTIAPGLFDTPLLS---MLNEKVRNFLARSIP----  216 (254)
Q Consensus       155 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~v~Pg~~~t~~~~---~~~~~~~~~~~~~~~----  216 (254)
                             +..+...|+.+|.+.+.+++.++.++.+    .+++++.++|+.+..+...   ...+.+........+    
T Consensus       138 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~  217 (349)
T TIGR02622       138 WGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIR  217 (349)
T ss_pred             CCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEEC
Confidence                   1234678999999999999999988855    4899999999999886421   112222222222111    


Q ss_pred             ---CCCCCCCHHHHHHHHHHHhcC----CCcccceEEecCC
Q psy12833        217 ---APQRLGHPDEFAQLVQSIITN----PLINGEVIRIDGA  250 (254)
Q Consensus       217 ---~~~~~~~~~~va~~~~~l~~~----~~~~G~~i~~~gG  250 (254)
                         ....+++++|++++++.++..    +...|+.+++..|
T Consensus       218 ~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       218 NPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             CCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence               113567999999999987752    1234678999654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.91  E-value=1.3e-22  Score=171.86  Aligned_cols=218  Identities=19%  Similarity=0.188  Sum_probs=159.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++|++|||||+|+||++++++|+++|++|+++.|+....+......     ..++.++.+|++|++++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4799999999999999999999999999999888876554432211     2468899999999999888876       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||....    .      .+.+.+.+.+++|+.+++++++++.+.+.         .++||++||..+..+..
T Consensus        77 ~~d~vih~A~~~~~----~------~~~~~~~~~~~~n~~g~~~ll~a~~~~~~---------~~~iv~~SS~~~~~~~~  137 (325)
T PLN02989         77 GCETVFHTASPVAI----T------VKTDPQVELINPAVNGTINVLRTCTKVSS---------VKRVILTSSMAAVLAPE  137 (325)
T ss_pred             CCCEEEEeCCCCCC----C------CCCChHHHHHHHHHHHHHHHHHHHHHcCC---------ceEEEEecchhheecCC
Confidence            58999999985421    1      23456788999999999999999877431         36899999976543210


Q ss_pred             ----------------------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc---ch-HHHHHHH
Q psy12833        158 ----------------------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM---LN-EKVRNFL  211 (254)
Q Consensus       158 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~---~~-~~~~~~~  211 (254)
                                            ....|+.+|.+.+.+++.+++++   ++.++.++|+.+.+|....   .. ..+....
T Consensus       138 ~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~  214 (325)
T PLN02989        138 TKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLNFSVAVIVELM  214 (325)
T ss_pred             ccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCCchHHHHHHHH
Confidence                                  12469999999999998887654   7999999999998876432   11 1222222


Q ss_pred             HhcCCC---CCCCCCHHHHHHHHHHHhcCCCcccceEEecCC
Q psy12833        212 ARSIPA---PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       212 ~~~~~~---~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      .+..+.   ...+++++|+|++++.++..+.. +..++++|+
T Consensus       215 ~~~~~~~~~~r~~i~v~Dva~a~~~~l~~~~~-~~~~ni~~~  255 (325)
T PLN02989        215 KGKNPFNTTHHRFVDVRDVALAHVKALETPSA-NGRYIIDGP  255 (325)
T ss_pred             cCCCCCCCcCcCeeEHHHHHHHHHHHhcCccc-CceEEEecC
Confidence            222221   13577899999999999875433 346788544

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.89  E-value=2.3e-21  Score=165.16  Aligned_cols=228  Identities=13%  Similarity=0.043  Sum_probs=155.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-----hHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-----GESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+.     ++....+   .+.++.++.+|++|.+++.++++.. 
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   82 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-   82 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc-
Confidence            468999999999999999999999999999999887542     2222111   1345889999999999999998875 


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                          ++|+|||||+.....          ...+.....+++|+.++.++++++.+...++.     .-.++|++||...+
T Consensus        83 ----~~d~Vih~A~~~~~~----------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~-----~~~~~v~~Ss~~vy  143 (340)
T PLN02653         83 ----KPDEVYNLAAQSHVA----------VSFEMPDYTADVVATGALRLLEAVRLHGQETG-----RQIKYYQAGSSEMY  143 (340)
T ss_pred             ----CCCEEEECCcccchh----------hhhhChhHHHHHHHHHHHHHHHHHHHhccccc-----cceeEEEeccHHHh
Confidence                689999999964321          12334567789999999999999888764321     01368888876433


Q ss_pred             cC----------CCCCccchhchHHHHHhHHHHHHHhcc---CCcEEEEEecCCccccccccchHHHHHHHHhc--CCC-
Q psy12833        154 EG----------QSGQVAYSASKSGIVGMTLPMARDLAG---AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS--IPA-  217 (254)
Q Consensus       154 ~~----------~~~~~~Y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~--~~~-  217 (254)
                      ..          ..+...|+.||.+.+.+++.++.++.-   .++.++.+.|+...+.+...+ ..........  .+. 
T Consensus       144 g~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~-~~~~~~~~~~~~~~~~  222 (340)
T PLN02653        144 GSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI-TRAVGRIKVGLQKKLF  222 (340)
T ss_pred             CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHH-HHHHHHHHcCCCCceE
Confidence            22          124568999999999999999887642   234445556664433211111 1111111111  111 


Q ss_pred             ------CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 ------PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 ------~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                            ...+++++|+|++++.++....  +..+++.+|..
T Consensus       223 ~g~g~~~rd~i~v~D~a~a~~~~~~~~~--~~~yni~~g~~  261 (340)
T PLN02653        223 LGNLDASRDWGFAGDYVEAMWLMLQQEK--PDDYVVATEES  261 (340)
T ss_pred             eCCCcceecceeHHHHHHHHHHHHhcCC--CCcEEecCCCc
Confidence                  1356899999999999997542  46788876653

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=4.8e-21  Score=162.01  Aligned_cols=217  Identities=21%  Similarity=0.185  Sum_probs=155.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      .||++|||||+|+||++++++|+++|++|+++.|+.+..+......     ..++.++.+|++|++++.++++       
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   76 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------   76 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------
Confidence            5789999999999999999999999999999999876544332211     2468899999999998888887       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-CC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-GQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-~~  156 (254)
                      ++|++||+|+.....           ..+.....+++|+.+..++++++...   ..      -++||++||..+.. +.
T Consensus        77 ~~d~vih~A~~~~~~-----------~~~~~~~~~~~nv~gt~~ll~~~~~~---~~------v~rvV~~SS~~~~~~~~  136 (322)
T PLN02986         77 GCDAVFHTASPVFFT-----------VKDPQTELIDPALKGTINVLNTCKET---PS------VKRVILTSSTAAVLFRQ  136 (322)
T ss_pred             CCCEEEEeCCCcCCC-----------CCCchhhhhHHHHHHHHHHHHHHHhc---CC------ccEEEEecchhheecCC
Confidence            589999999863210           11223467899999999998876542   11      35899999976431 10


Q ss_pred             ----------------C-----CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHH-HHHHH
Q psy12833        157 ----------------S-----GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEK-VRNFL  211 (254)
Q Consensus       157 ----------------~-----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~-~~~~~  211 (254)
                                      |     +...|+.+|.+.+.+++.+.+++   ++.++.++|+.+.++.....   ... .....
T Consensus       137 ~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~  213 (322)
T PLN02986        137 PPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFI  213 (322)
T ss_pred             ccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHH
Confidence                            0     13569999999999888876654   79999999999988864321   112 22222


Q ss_pred             HhcCC---CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCC
Q psy12833        212 ARSIP---APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       212 ~~~~~---~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      .....   ....+++++|+|++++.++..+...| .++++|+
T Consensus       214 ~g~~~~~~~~~~~v~v~Dva~a~~~al~~~~~~~-~yni~~~  254 (322)
T PLN02986        214 NGKNLFNNRFYRFVDVRDVALAHIKALETPSANG-RYIIDGP  254 (322)
T ss_pred             cCCCCCCCcCcceeEHHHHHHHHHHHhcCcccCC-cEEEecC
Confidence            21111   11357899999999999997654445 6788543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=1.7e-21  Score=151.19  Aligned_cols=171  Identities=27%  Similarity=0.429  Sum_probs=130.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC---chhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-RVVLCDLPT---SEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++|||||.+|||..+++.|+++|. ++++++|+.   ...++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            799999999999999999999986 899999983   2233333333   678999999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      ++.|||+||......+.+      .+.+++...+...+.+..++.+.+.+    .+      ...++..||..+..+.++
T Consensus        82 i~gVih~ag~~~~~~~~~------~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~------l~~~i~~SSis~~~G~~g  145 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQD------QTPDEFDAVLAPKVRGLWNLHEALEN----RP------LDFFILFSSISSLLGGPG  145 (181)
T ss_dssp             EEEEEE-------B-GCC--------HHHHHHHHHHHHHHHHHHHHHHTT----TT------TSEEEEEEEHHHHTT-TT
T ss_pred             cceeeeeeeeeccccccc------CCHHHHHHHHhhhhhHHHHHHHHhhc----CC------CCeEEEECChhHhccCcc
Confidence            999999999876666666      89999999999999999999887766    22      468999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFD  196 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~  196 (254)
                      ...|+++.+.++.|++....    .|.++.+|..|..+
T Consensus       146 q~~YaaAN~~lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  146 QSAYAAANAFLDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             BHHHHHHHHHHHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             hHhHHHHHHHHHHHHHHHHh----CCCCEEEEEccccC
Confidence            99999999988888776543    46778888776543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02583 cinnamoyl-CoA reductase

Probab=99.88  E-value=9.7e-21  Score=158.35  Aligned_cols=212  Identities=16%  Similarity=0.067  Sum_probs=149.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch--hHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE--GESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~--~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+.  ..+...++   +.++.++++|++|.+++.+++.       
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence            46899999999999999999999999999999986432  22222332   3468889999999998876665       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-  156 (254)
                      ..|.++|.++...     +      . ..++++.+++|+.+++++++++.+.+.         .++||++||..+.... 
T Consensus        78 ~~d~v~~~~~~~~-----~------~-~~~~~~~~~~nv~gt~~ll~aa~~~~~---------v~riV~~SS~~a~~~~~  136 (297)
T PLN02583         78 GCSGLFCCFDPPS-----D------Y-PSYDEKMVDVEVRAAHNVLEACAQTDT---------IEKVVFTSSLTAVIWRD  136 (297)
T ss_pred             CCCEEEEeCccCC-----c------c-cccHHHHHHHHHHHHHHHHHHHHhcCC---------ccEEEEecchHheeccc
Confidence            6788888654221     1      1 124578899999999999999887531         3689999998654211 


Q ss_pred             --C---------CC----------ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcC
Q psy12833        157 --S---------GQ----------VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSI  215 (254)
Q Consensus       157 --~---------~~----------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~  215 (254)
                        +         .+          ..|+.||...+.+++.++++   .|++++.++|+.+.++.......    ......
T Consensus       137 ~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~----~~~~~~  209 (297)
T PLN02583        137 DNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNP----YLKGAA  209 (297)
T ss_pred             ccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchh----hhcCCc
Confidence              0         00          15899999888888777654   48999999999998876432111    111111


Q ss_pred             C---C-CCCCCCHHHHHHHHHHHhcCCCcccceEEecCC
Q psy12833        216 P---A-PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       216 ~---~-~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      +   . ...+++++|+|++++.++..+...|. +.+.++
T Consensus       210 ~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~r-~~~~~~  247 (297)
T PLN02583        210 QMYENGVLVTVDVNFLVDAHIRAFEDVSSYGR-YLCFNH  247 (297)
T ss_pred             ccCcccCcceEEHHHHHHHHHHHhcCcccCCc-EEEecC
Confidence            1   1 02477999999999999986655564 444443

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.88  E-value=2.9e-20  Score=159.30  Aligned_cols=228  Identities=19%  Similarity=0.138  Sum_probs=157.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEE-EeeCCCch--hHHHHHH-hCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVV-LCDLPTSE--GESVAKE-LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~-~~~r~~~~--~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|||||+|+||+++++.|.++|++++ +++|....  ....... ...++.++.+|++|.+++++++++.     ++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCC
Confidence            5899999999999999999999998755 45554321  1111111 1235778999999999998888753     699


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc------
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE------  154 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~------  154 (254)
                      +|||+||.....          .+.++++..+++|+.++.++++++.+.+..-... .....+++++||...+.      
T Consensus        77 ~Vih~A~~~~~~----------~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~-~~~~~~~i~~SS~~vyg~~~~~~  145 (355)
T PRK10217         77 CVMHLAAESHVD----------RSIDGPAAFIETNIVGTYTLLEAARAYWNALTED-KKSAFRFHHISTDEVYGDLHSTD  145 (355)
T ss_pred             EEEECCcccCcc----------hhhhChHHHHHHhhHHHHHHHHHHHHhhhccccc-ccCceEEEEecchhhcCCCCCCC
Confidence            999999864211          2445678899999999999999998754311000 00025899999965332      


Q ss_pred             -------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc--cchHHHHHHHHhc--CCC------
Q psy12833        155 -------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARS--IPA------  217 (254)
Q Consensus       155 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~--~~~------  217 (254)
                             +..+...|+.||.+.+.+++.+++++   ++++..+.|+.+..|...  .............  ++.      
T Consensus       146 ~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  222 (355)
T PRK10217        146 DFFTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQ  222 (355)
T ss_pred             CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCe
Confidence                   22346789999999999999987765   677888888777665431  1112222222211  111      


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 ~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      ...+++++|++.+++.++... ..|+++++.+|..
T Consensus       223 ~~~~i~v~D~a~a~~~~~~~~-~~~~~yni~~~~~  256 (355)
T PRK10217        223 IRDWLYVEDHARALYCVATTG-KVGETYNIGGHNE  256 (355)
T ss_pred             eeCcCcHHHHHHHHHHHHhcC-CCCCeEEeCCCCc
Confidence            135789999999999988653 3678999987754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.87  E-value=1.4e-20  Score=160.62  Aligned_cols=223  Identities=15%  Similarity=0.074  Sum_probs=148.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-----hHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-----GESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     .+.+.++.    +.++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999997542     22221111    245889999999999999988865   


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-  154 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-  154 (254)
                        ++|+|||+|+.....          ...+.....+++|+.++.++++++.+.-.+.       ..++|++||...+. 
T Consensus        78 --~~d~ViH~Aa~~~~~----------~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~-------~~~~v~~SS~~vyg~  138 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK----------VSFEIPEYTADVDGIGTLRLLEAVRTLGLIK-------SVKFYQASTSELYGK  138 (343)
T ss_pred             --CCCEEEECCcccccc----------hhhhChHHHHHHHHHHHHHHHHHHHHhCCCc-------CeeEEEeccHHhhCC
Confidence              689999999975321          1222235667889999999999887642111       24799999975443 


Q ss_pred             ----------CCCCCccchhchHHHHHhHHHHHHHhccC---CcEEEEEecCCccccccccchHHHHHHHHhc-CC----
Q psy12833        155 ----------GQSGQVAYSASKSGIVGMTLPMARDLAGA---GIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-IP----  216 (254)
Q Consensus       155 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~---~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~-~~----  216 (254)
                                +..+...|+.||.+.+.+++.++.++.-.   ++.++.+.|+.-.......+.........+. .+    
T Consensus       139 ~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  218 (343)
T TIGR01472       139 VQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLG  218 (343)
T ss_pred             CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeC
Confidence                      12255789999999999999998876321   2233444454322111111111111111111 00    


Q ss_pred             ---CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        217 ---APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       217 ---~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                         ....+++++|+|++++.++..+.  +..+++.+|.
T Consensus       219 ~g~~~rd~i~V~D~a~a~~~~~~~~~--~~~yni~~g~  254 (343)
T TIGR01472       219 NLDAKRDWGHAKDYVEAMWLMLQQDK--PDDYVIATGE  254 (343)
T ss_pred             CCccccCceeHHHHHHHHHHHHhcCC--CccEEecCCC
Confidence               11456899999999998886542  3568886664

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.87  E-value=8.7e-21  Score=159.37  Aligned_cols=189  Identities=19%  Similarity=0.099  Sum_probs=141.0

Q ss_pred             CcEEEEeCCCChHHHH--HHHHHHHcCCEEEEeeCCCch---------------hHHHHHHhCCCceEEecCCCCHHHHH
Q psy12833          4 GVVGLVTGGASGLGKA--TVERIVREGGRVVLCDLPTSE---------------GESVAKELGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         4 ~~~~lItGas~giG~a--~a~~l~~~g~~v~~~~r~~~~---------------~~~~~~~~~~~~~~~~~Dls~~~~~~   66 (254)
                      +|++||||+++|||.+  +++.| ++|++|+++++..+.               .++..++.+..+..++||++++++++
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~  119 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ  119 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            6999999999999999  89999 999998888754321               22233344566788999999999999


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCCcccc-------------ccC---------------CCCcCCHHHHHHHHHHHhHH
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCAFKIF-------------NYN---------------KGTVHSLDDFKRILLVNTVG  118 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~~~~~-------------~~~---------------~~~~~~~~~~~~~~~~n~~~  118 (254)
                      ++++.+.+.+|++|+||||+|........             +..               +....+.++++..  +++.|
T Consensus       120 ~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v~vMg  197 (398)
T PRK13656        120 KVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--VKVMG  197 (398)
T ss_pred             HHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--HHhhc
Confidence            99999999999999999999987443210             000               0001233333332  33333


Q ss_pred             H-----HHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC--ccchhchHHHHHhHHHHHHHhccCCcEEEEEe
Q psy12833        119 T-----FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ--VAYSASKSGIVGMTLPMARDLAGAGIRVNTIA  191 (254)
Q Consensus       119 ~-----~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~  191 (254)
                      .     +.=.+...+.|.+        .++++..|+..+....|.+  ..-+.+|++|+.-++.|+.++++.|+|+|++.
T Consensus       198 gedw~~Wi~al~~a~lla~--------g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~  269 (398)
T PRK13656        198 GEDWELWIDALDEAGVLAE--------GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSV  269 (398)
T ss_pred             cchHHHHHHHHHhcccccC--------CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEe
Confidence            3     2224445555543        5899999999988888776  37799999999999999999999999999999


Q ss_pred             cCCccccccccc
Q psy12833        192 PGLFDTPLLSML  203 (254)
Q Consensus       192 Pg~~~t~~~~~~  203 (254)
                      +|.+.|.-...+
T Consensus       270 ~g~~~T~Ass~I  281 (398)
T PRK13656        270 LKAVVTQASSAI  281 (398)
T ss_pred             cCcccchhhhcC
Confidence            999999765443

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.87  E-value=4.9e-20  Score=161.64  Aligned_cols=224  Identities=17%  Similarity=0.108  Sum_probs=155.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc---h--------------hHHH---HHHhCCCceEEecCCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS---E--------------GESV---AKELGPDVKFAPVDVTS   61 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~---~--------------~~~~---~~~~~~~~~~~~~Dls~   61 (254)
                      ++++++|||||+|+||++++++|+++|++|++++|...   .              .+.+   .+..+.++.++.+|++|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            46789999999999999999999999999999874211   1              0111   11113468899999999


Q ss_pred             HHHHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCC
Q psy12833         62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLR  141 (254)
Q Consensus        62 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~  141 (254)
                      ++++.+++++.     ++|+|||+|+.... ....      .++++++..+++|+.+++++++++...-.         .
T Consensus       125 ~~~v~~~l~~~-----~~D~ViHlAa~~~~-~~~~------~~~~~~~~~~~~Nv~gt~nlleaa~~~gv---------~  183 (442)
T PLN02572        125 FEFLSEAFKSF-----EPDAVVHFGEQRSA-PYSM------IDRSRAVFTQHNNVIGTLNVLFAIKEFAP---------D  183 (442)
T ss_pred             HHHHHHHHHhC-----CCCEEEECCCcccC-hhhh------cChhhHHHHHHHHHHHHHHHHHHHHHhCC---------C
Confidence            99999988864     69999999975321 1112      34556778889999999999998766321         2


Q ss_pred             cEEEEEeccccccC------------------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccc
Q psy12833        142 GVIINTASIAAYEG------------------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT  197 (254)
Q Consensus       142 ~~ii~vss~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t  197 (254)
                      .++|++||...+..                        ..+...|+.+|.+.+.+++.++..   +|+.+..++|+.+..
T Consensus       184 ~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyG  260 (442)
T PLN02572        184 CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYG  260 (442)
T ss_pred             ccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccC
Confidence            47999998764421                        113457999999999888877664   479999999998877


Q ss_pred             ccccc-------------------chHHHHHHHH-hc-CCCC------CCCCCHHHHHHHHHHHhcCCCccc--ceEEec
Q psy12833        198 PLLSM-------------------LNEKVRNFLA-RS-IPAP------QRLGHPDEFAQLVQSIITNPLING--EVIRID  248 (254)
Q Consensus       198 ~~~~~-------------------~~~~~~~~~~-~~-~~~~------~~~~~~~~va~~~~~l~~~~~~~G--~~i~~~  248 (254)
                      +....                   .......... +. ++..      ..+++++|++.+++.++..+...|  +++++.
T Consensus       261 p~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nig  340 (442)
T PLN02572        261 VRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQF  340 (442)
T ss_pred             CCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeC
Confidence            64321                   0111111111 11 1111      256899999999999987543345  467774


Q ss_pred             C
Q psy12833        249 G  249 (254)
Q Consensus       249 g  249 (254)
                      +
T Consensus       341 s  341 (442)
T PLN02572        341 T  341 (442)
T ss_pred             C
Confidence            3

>PLN02214 cinnamoyl-CoA reductase

Probab=99.86  E-value=8e-20  Score=155.72  Aligned_cols=212  Identities=18%  Similarity=0.128  Sum_probs=151.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHH-HHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESV-AKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~-~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+..... ..++   ..++.++++|++|.+++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            4678999999999999999999999999999999976643221 1222   2357889999999999888876       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-  156 (254)
                      ++|+|||+|+...               +++...+++|+.++.++++++...    .      .++||++||..+..+. 
T Consensus        81 ~~d~Vih~A~~~~---------------~~~~~~~~~nv~gt~~ll~aa~~~----~------v~r~V~~SS~~avyg~~  135 (342)
T PLN02214         81 GCDGVFHTASPVT---------------DDPEQMVEPAVNGAKFVINAAAEA----K------VKRVVITSSIGAVYMDP  135 (342)
T ss_pred             cCCEEEEecCCCC---------------CCHHHHHHHHHHHHHHHHHHHHhc----C------CCEEEEeccceeeeccC
Confidence            5899999998531               234677899999999999887642    1      3589999996533210 


Q ss_pred             ---C-----------------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hHHHHHHHH
Q psy12833        157 ---S-----------------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLA  212 (254)
Q Consensus       157 ---~-----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~~~~~~~~  212 (254)
                         +                 +...|+.+|.+.+.+++.++.++   |+.+..++|+.+..+.....    .........
T Consensus       136 ~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~  212 (342)
T PLN02214        136 NRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLT  212 (342)
T ss_pred             CCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHc
Confidence               0                 23479999999999998877654   79999999999988753211    111112222


Q ss_pred             hcCCC----CCCCCCHHHHHHHHHHHhcCCCcccceEEecC
Q psy12833        213 RSIPA----PQRLGHPDEFAQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       213 ~~~~~----~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      +..+.    ...+++++|+|++++.++..+...| .+++.+
T Consensus       213 g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~~g-~yn~~~  252 (342)
T PLN02214        213 GSAKTYANLTQAYVDVRDVALAHVLVYEAPSASG-RYLLAE  252 (342)
T ss_pred             CCcccCCCCCcCeeEHHHHHHHHHHHHhCcccCC-cEEEec
Confidence            21111    1357799999999999997654344 555643

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.86  E-value=8.9e-20  Score=155.28  Aligned_cols=212  Identities=19%  Similarity=0.186  Sum_probs=149.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH--HHhC--CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA--KELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~--~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++++++|||||+|+||++++++|+++|++|+++.|+.+......  ..+.  .++.++.+|++|++++.++++       
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------
Confidence            35789999999999999999999999999998888765443322  1121  257889999999998887765       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC--
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--  155 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~--  155 (254)
                      ++|++||+|+...   .        ...+.....+++|+.+..++++++....   .      .+++|++||.+.+.+  
T Consensus        80 ~~d~vih~A~~~~---~--------~~~~~~~~~~~~nv~g~~~ll~a~~~~~---~------~~~~v~~SS~~~~g~~~  139 (338)
T PLN00198         80 GCDLVFHVATPVN---F--------ASEDPENDMIKPAIQGVHNVLKACAKAK---S------VKRVILTSSAAAVSINK  139 (338)
T ss_pred             cCCEEEEeCCCCc---c--------CCCChHHHHHHHHHHHHHHHHHHHHhcC---C------ccEEEEeecceeeeccC
Confidence            6899999998421   1        1112234568999999999999876631   1      368999999765431  


Q ss_pred             ----------------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hHHHHH
Q psy12833        156 ----------------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NEKVRN  209 (254)
Q Consensus       156 ----------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~~~~~  209 (254)
                                            .++...|+.||.+.+.+++.++.+   +|+++..++|+.+..|.....    ......
T Consensus       140 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~  216 (338)
T PLN00198        140 LSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMS  216 (338)
T ss_pred             CCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHH
Confidence                                  123457999999999998887765   479999999999988753211    111111


Q ss_pred             HHHhc---------CCC---CCCCCCHHHHHHHHHHHhcCCCcccc
Q psy12833        210 FLARS---------IPA---PQRLGHPDEFAQLVQSIITNPLINGE  243 (254)
Q Consensus       210 ~~~~~---------~~~---~~~~~~~~~va~~~~~l~~~~~~~G~  243 (254)
                      ...+.         .+.   ...+++++|++++++.++..+...|.
T Consensus       217 ~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~~~~  262 (338)
T PLN00198        217 LITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASGR  262 (338)
T ss_pred             HHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCcCCc
Confidence            11110         010   03578999999999999875433344

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.86  E-value=1.1e-19  Score=155.53  Aligned_cols=220  Identities=15%  Similarity=0.136  Sum_probs=152.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++++|||||+|+||++++++|+++|++|++++|+.+..+....++  +.++.++.+|++|.+++.++++       ++|
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   81 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------GCD   81 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------CCC
Confidence            4689999999999999999999999999999999876655544443  3468899999999998888775       589


Q ss_pred             EEEeCCccCCCcc-ccccCCCCcCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-
Q psy12833         81 VNVNCAGISCAFK-IFNYNKGTVHSLDDF--KRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-  156 (254)
Q Consensus        81 ~li~~ag~~~~~~-~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-  156 (254)
                      +|||+|+...... ...      .+++.+  ...++.|+.+..++++++.+..   .      .++||++||.+.+... 
T Consensus        82 ~Vih~A~~~~~~~~~~~------~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~------~~~~v~~SS~~vyg~~~  146 (353)
T PLN02896         82 GVFHVAASMEFDVSSDH------NNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T------VKRVVFTSSISTLTAKD  146 (353)
T ss_pred             EEEECCccccCCccccc------cchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C------ccEEEEEechhhccccc
Confidence            9999999754321 011      123332  3466778899999988876542   1      3589999997655311 


Q ss_pred             ------------------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-ch---HHHH
Q psy12833        157 ------------------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-LN---EKVR  208 (254)
Q Consensus       157 ------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~~---~~~~  208 (254)
                                              ++...|+.||.+.+.+++.+++++   ++++..++|+.+..|.... ..   ....
T Consensus       147 ~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~~~~  223 (353)
T PLN02896        147 SNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVPSSIQVLL  223 (353)
T ss_pred             cCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCCchHHHHH
Confidence                                    112379999999999998877654   7999999998888875421 11   1111


Q ss_pred             HHHHhcC---CC---------CCCCCCHHHHHHHHHHHhcCCCcccceEEec
Q psy12833        209 NFLARSI---PA---------PQRLGHPDEFAQLVQSIITNPLINGEVIRID  248 (254)
Q Consensus       209 ~~~~~~~---~~---------~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~  248 (254)
                      ..+.+..   +.         ...+++++|+|++++.++..+...|. +.+.
T Consensus       224 ~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~-~~~~  274 (353)
T PLN02896        224 SPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEGR-YICC  274 (353)
T ss_pred             HHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCcCcc-EEec
Confidence            1111111   00         01468999999999999975433443 4443

>PLN02650 dihydroflavonol-4-reductase

Probab=99.86  E-value=6.9e-20  Score=156.72  Aligned_cols=214  Identities=17%  Similarity=0.133  Sum_probs=152.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +.|++|||||+|.||++++++|+++|++|++++|+.+.........     ..++.++.+|++|.+++.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4689999999999999999999999999999999876555443321     1357889999999998888776       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-  156 (254)
                      .+|++||+|+.....           ..+.....+++|+.++.++++++.+...         .++||++||.....+. 
T Consensus        77 ~~d~ViH~A~~~~~~-----------~~~~~~~~~~~Nv~gt~~ll~aa~~~~~---------~~r~v~~SS~~~~~~~~  136 (351)
T PLN02650         77 GCTGVFHVATPMDFE-----------SKDPENEVIKPTVNGMLSIMKACAKAKT---------VRRIVFTSSAGTVNVEE  136 (351)
T ss_pred             CCCEEEEeCCCCCCC-----------CCCchhhhhhHHHHHHHHHHHHHHhcCC---------ceEEEEecchhhcccCC
Confidence            589999999853211           1122356789999999999998876421         2589999997543210 


Q ss_pred             ---C------------------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHH---H
Q psy12833        157 ---S------------------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNF---L  211 (254)
Q Consensus       157 ---~------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~---~  211 (254)
                         +                  +...|+.||.+.+.+++.++.+   +|++++.++|+.+.+|..... .......   .
T Consensus       137 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~  213 (351)
T PLN02650        137 HQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLI  213 (351)
T ss_pred             CCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHh
Confidence               0                  1236999999999999888775   489999999999988754221 1111111   1


Q ss_pred             Hhc------CCCCCCCCCHHHHHHHHHHHhcCCCcccceEEec
Q psy12833        212 ARS------IPAPQRLGHPDEFAQLVQSIITNPLINGEVIRID  248 (254)
Q Consensus       212 ~~~------~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~  248 (254)
                      ...      ... ..+++++|+|++++.++..+...| .+...
T Consensus       214 ~~~~~~~~~~~~-r~~v~V~Dva~a~~~~l~~~~~~~-~~i~~  254 (351)
T PLN02650        214 TGNEAHYSIIKQ-GQFVHLDDLCNAHIFLFEHPAAEG-RYICS  254 (351)
T ss_pred             cCCccccCcCCC-cceeeHHHHHHHHHHHhcCcCcCc-eEEec
Confidence            111      111 467899999999999997654345 34333

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=8.5e-20  Score=154.29  Aligned_cols=215  Identities=21%  Similarity=0.227  Sum_probs=150.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH--h---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE--L---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~--~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++|++|||||+|+||++++++|+++|++|+++.|+..........  .   ..++.++++|++|++++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            578999999999999999999999999999999876543322211  1   2468899999999998887776       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc--ccC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA--YEG  155 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~--~~~  155 (254)
                      ++|+|||+|+.....          .. +.....+++|+.++.++++++....   .      .+++|++||..+  +.+
T Consensus        76 ~~d~Vih~A~~~~~~----------~~-~~~~~~~~~nv~gt~~ll~a~~~~~---~------~~~~v~~SS~~~~~y~~  135 (322)
T PLN02662         76 GCEGVFHTASPFYHD----------VT-DPQAELIDPAVKGTLNVLRSCAKVP---S------VKRVVVTSSMAAVAYNG  135 (322)
T ss_pred             CCCEEEEeCCcccCC----------CC-ChHHHHHHHHHHHHHHHHHHHHhCC---C------CCEEEEccCHHHhcCCC
Confidence            689999999864210          11 1124678999999999999876531   1      358999999753  211


Q ss_pred             C---------------C-----CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---h-HHHHHHH
Q psy12833        156 Q---------------S-----GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---N-EKVRNFL  211 (254)
Q Consensus       156 ~---------------~-----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~-~~~~~~~  211 (254)
                      .               |     ....|+.+|.+.+.+++.+.++   .+++++.++|+.+.++.....   . ....+..
T Consensus       136 ~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~  212 (322)
T PLN02662        136 KPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLI  212 (322)
T ss_pred             cCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHh
Confidence            1               1     0136999999888888776654   479999999999988864321   1 1122222


Q ss_pred             Hhc--CC-CCCCCCCHHHHHHHHHHHhcCCCcccceEEec
Q psy12833        212 ARS--IP-APQRLGHPDEFAQLVQSIITNPLINGEVIRID  248 (254)
Q Consensus       212 ~~~--~~-~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~  248 (254)
                      .+.  .+ ....+++++|+|++++.++..+...|+ +++.
T Consensus       213 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~-~~~~  251 (322)
T PLN02662        213 NGAQTFPNASYRWVDVRDVANAHIQAFEIPSASGR-YCLV  251 (322)
T ss_pred             cCCccCCCCCcCeEEHHHHHHHHHHHhcCcCcCCc-EEEe
Confidence            111  11 114578999999999999976544564 4544

>PLN02240 UDP-glucose 4-epimerase

Probab=99.85  E-value=4.5e-19  Score=151.71  Aligned_cols=225  Identities=21%  Similarity=0.202  Sum_probs=152.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH----HHHHH---hCCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE----SVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~----~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      ||++|+++||||+|+||++++++|+++|++|++++|......    +..+.   ...++.++.+|++|++++.+++++. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            578999999999999999999999999999999987543221    12111   1346889999999999998888753 


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                          ++|++||+|+.....          .+.+++...+++|+.++.++++++..    .+      .+++|++||...+
T Consensus        81 ----~~d~vih~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~~~~v~~Ss~~vy  136 (352)
T PLN02240         81 ----RFDAVIHFAGLKAVG----------ESVAKPLLYYDNNLVGTINLLEVMAK----HG------CKKLVFSSSATVY  136 (352)
T ss_pred             ----CCCEEEEccccCCcc----------ccccCHHHHHHHHHHHHHHHHHHHHH----cC------CCEEEEEccHHHh
Confidence                799999999864211          13345678899999999999875432    22      3589999996543


Q ss_pred             c-----------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccc------------ccccchHHHHHH
Q psy12833        154 E-----------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP------------LLSMLNEKVRNF  210 (254)
Q Consensus       154 ~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~------------~~~~~~~~~~~~  210 (254)
                      .           +..+...|+.+|.+.+.+++.++.+.  .++.+..+.|+.+..+            ....+.......
T Consensus       137 g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~  214 (352)
T PLN02240        137 GQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQV  214 (352)
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHH
Confidence            2           11245689999999999998887652  3566666665433221            001111111111


Q ss_pred             HHhcCC---C-------C-----CCCCCHHHHHHHHHHHhcC----CCcccceEEecCCcc
Q psy12833        211 LARSIP---A-------P-----QRLGHPDEFAQLVQSIITN----PLINGEVIRIDGALR  252 (254)
Q Consensus       211 ~~~~~~---~-------~-----~~~~~~~~va~~~~~l~~~----~~~~G~~i~~~gG~~  252 (254)
                      ..+..+   .       +     ..+++++|+|++++.++..    +...|+++++.+|..
T Consensus       215 ~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~  275 (352)
T PLN02240        215 AVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKG  275 (352)
T ss_pred             HhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCc
Confidence            111111   0       0     1357899999998887742    334578999987764

>PRK06720 hypothetical protein; Provisional

Probab=99.85  E-value=6.5e-20  Score=140.24  Aligned_cols=145  Identities=19%  Similarity=0.314  Sum_probs=114.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++||||++|||++++.+|+++|++|++++|+.+.+++..+++   +.++.++++|++|.++++++++++.+.+|+
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887776655554   556778999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCC-CCCCcEEEEEecccccc
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNE-DGLRGVIINTASIAAYE  154 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~~~~ii~vss~~~~~  154 (254)
                      +|++|||||.....+....     .+.++ +.  .+|+.+.+..++.+.+.|.++...- ....|++..+|+.++-+
T Consensus        94 iDilVnnAG~~~~~~~~~~-----~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         94 IDMLFQNAGLYKIDSIFSR-----QQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             CCEEEECCCcCCCCCcccc-----cchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            9999999998654433331     24344 33  6677777888899888888764322 34468888888876543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.84  E-value=5.5e-19  Score=148.69  Aligned_cols=218  Identities=21%  Similarity=0.189  Sum_probs=153.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCc--hhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREG--GRVVLCDLPTS--EGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++||||+|+||++++++|.++|  ++|++.+|...  ..+.+ +++  ..++.++.+|++|++++.++++..     ++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL-ADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QP   74 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh-hhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence            48999999999999999999987  78888776421  11111 222  236788999999999999988753     69


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC----
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG----  155 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~----  155 (254)
                      |+|||+|+.....          ...++.+..+++|+.+..++++++...+.         ..+++++||...+.+    
T Consensus        75 d~vi~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~i~~Ss~~v~g~~~~~  135 (317)
T TIGR01181        75 DAVVHFAAESHVD----------RSISGPAAFIETNVVGTYTLLEAVRKYWH---------EFRFHHISTDEVYGDLEKG  135 (317)
T ss_pred             CEEEEcccccCch----------hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---------CceEEEeeccceeCCCCCC
Confidence            9999999864321          23455677899999999999887765432         247999998654321    


Q ss_pred             --------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc--cchHHHHHHHHhc--CCCC-----
Q psy12833        156 --------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARS--IPAP-----  218 (254)
Q Consensus       156 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~--~~~~-----  218 (254)
                              ..+...|+.+|.+.+.+++.++.++   ++++..++|+.+..+...  ...+.........  ++..     
T Consensus       136 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (317)
T TIGR01181       136 DAFTETTPLAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQ  212 (317)
T ss_pred             CCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCce
Confidence                    1234579999999999999887654   689999999988776432  1222222222222  1111     


Q ss_pred             -CCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        219 -QRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       219 -~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                       ..+++++|+++++..++... ..|+++++.+|..
T Consensus       213 ~~~~i~v~D~a~~~~~~~~~~-~~~~~~~~~~~~~  246 (317)
T TIGR01181       213 VRDWLYVEDHCRAIYLVLEKG-RVGETYNIGGGNE  246 (317)
T ss_pred             EEeeEEHHHHHHHHHHHHcCC-CCCceEEeCCCCc
Confidence             23668999999999998753 4678899877643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.84  E-value=8.3e-19  Score=149.88  Aligned_cols=221  Identities=16%  Similarity=0.033  Sum_probs=155.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      ++++++|||||+|.||++++++|.++|++|++++|............        ..++.++.+|+.|.+++.++++   
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence            56799999999999999999999999999999998654322211111        1357889999999988877775   


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                          .+|+|||+|+.....          ...++....+++|+.++.++++++..    ..      -.++|++||...+
T Consensus        90 ----~~d~ViHlAa~~~~~----------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~------~~~~v~~SS~~vy  145 (348)
T PRK15181         90 ----NVDYVLHQAALGSVP----------RSLKDPIATNSANIDGFLNMLTAARD----AH------VSSFTYAASSSTY  145 (348)
T ss_pred             ----CCCEEEECccccCch----------hhhhCHHHHHHHHHHHHHHHHHHHHH----cC------CCeEEEeechHhh
Confidence                589999999864321          12233456789999999999887643    22      3589999987554


Q ss_pred             cCC-----------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------cchHHHHHHHH-hc-
Q psy12833        154 EGQ-----------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------MLNEKVRNFLA-RS-  214 (254)
Q Consensus       154 ~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~~~~~~-~~-  214 (254)
                      ...           .+...|+.+|.+.+.+++.++.+   .++++..+.|+.+..|...      ...+....... +. 
T Consensus       146 g~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~  222 (348)
T PRK15181        146 GDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEP  222 (348)
T ss_pred             CCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCC
Confidence            311           13457999999999988877654   4799999999988776431      11222222222 11 


Q ss_pred             CCCC------CCCCCHHHHHHHHHHHhcCC--CcccceEEecCCcc
Q psy12833        215 IPAP------QRLGHPDEFAQLVQSIITNP--LINGEVIRIDGALR  252 (254)
Q Consensus       215 ~~~~------~~~~~~~~va~~~~~l~~~~--~~~G~~i~~~gG~~  252 (254)
                      +...      ..+++++|+|++++.++...  ...|+++++.+|..
T Consensus       223 i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~  268 (348)
T PRK15181        223 IYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR  268 (348)
T ss_pred             cEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc
Confidence            1111      24578999999998877532  34689999977653

>KOG1502|consensus

Probab=99.84  E-value=4.2e-19  Score=145.83  Aligned_cols=219  Identities=19%  Similarity=0.140  Sum_probs=162.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHH--HHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGES--VAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~--~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      .+++|+||||||.||+.|+++|+++||+|..+.|++++.+.  ...++   ..+...+..||+|+++.+++++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            35899999999999999999999999999999999987444  23333   4568999999999999999999       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK-RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +.|+|+|.|......            .++.+ ++++..+.|+.+.+++....-.         -.+||++||.++....
T Consensus        78 gcdgVfH~Asp~~~~------------~~~~e~~li~pav~Gt~nVL~ac~~~~s---------VkrvV~TSS~aAv~~~  136 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFD------------LEDPEKELIDPAVKGTKNVLEACKKTKS---------VKRVVYTSSTAAVRYN  136 (327)
T ss_pred             CCCEEEEeCccCCCC------------CCCcHHhhhhHHHHHHHHHHHHHhccCC---------cceEEEeccHHHhccC
Confidence            789999998754321            11144 6889999999999888776431         3689999999888643


Q ss_pred             -C-----------CC----------ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hHHHHHH
Q psy12833        157 -S-----------GQ----------VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNF  210 (254)
Q Consensus       157 -~-----------~~----------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~~~~~~  210 (254)
                       +           .|          ..|+.+|...+.-+..+++|   .|+....++|+.+-.|.....    .....+.
T Consensus       137 ~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~  213 (327)
T KOG1502|consen  137 GPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKL  213 (327)
T ss_pred             CcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHH
Confidence             1           11          25888888655555555554   379999999999988865441    1122333


Q ss_pred             HHhcCC----CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        211 LARSIP----APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       211 ~~~~~~----~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      +.+..+    ....+++++|+|.+-+.+++.+.-.|+.|.+....+
T Consensus       214 i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~GRyic~~~~~~  259 (327)
T KOG1502|consen  214 IKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAKGRYICVGEVVS  259 (327)
T ss_pred             HhcccccCCCCceeeEeHHHHHHHHHHHHcCcccCceEEEecCccc
Confidence            333121    113457999999999999998888899998876543

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.83  E-value=2.2e-18  Score=147.49  Aligned_cols=225  Identities=20%  Similarity=0.164  Sum_probs=152.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCc--hhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGR-VVLCDLPTS--EGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~--~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++|||||+|+||++++++|.++|++ |+.+++...  ..+... .+  +.++.++.+|++|.+++++++++.     ++|
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVSDSERYVFEHADICDRAELDRIFAQH-----QPD   75 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcccCCceEEEEecCCCHHHHHHHHHhc-----CCC
Confidence            6999999999999999999999976 554555321  222221 22  345778999999999999988753     799


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-----  155 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-----  155 (254)
                      ++||+|+.....          .+.+..+..+++|+.++.++++++.+.|.+.+... ....++|++||...+..     
T Consensus        76 ~vih~A~~~~~~----------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~  144 (352)
T PRK10084         76 AVMHLAAESHVD----------RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDK-KNAFRFHHISTDEVYGDLPHPD  144 (352)
T ss_pred             EEEECCcccCCc----------chhcCchhhhhhhhHHHHHHHHHHHHhcccccccc-ccceeEEEecchhhcCCCCccc
Confidence            999999864321          12233466899999999999999988764322100 01247999999654321     


Q ss_pred             ----------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc--ccchHHHHHHHHhc--C
Q psy12833        156 ----------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL--SMLNEKVRNFLARS--I  215 (254)
Q Consensus       156 ----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~--~~~~~~~~~~~~~~--~  215 (254)
                                      ..+...|+.+|.+.+.+++.++.++   ++++..+.|+.+..+..  ....+.........  +
T Consensus       145 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~  221 (352)
T PRK10084        145 EVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPL  221 (352)
T ss_pred             cccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCe
Confidence                            1245689999999999999988765   56666677777665542  11122222222211  1


Q ss_pred             CCC------CCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        216 PAP------QRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       216 ~~~------~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      +..      ..+++++|++.++..++..+ ..|+.+++.+|.
T Consensus       222 ~~~~~g~~~~~~v~v~D~a~a~~~~l~~~-~~~~~yni~~~~  262 (352)
T PRK10084        222 PIYGKGDQIRDWLYVEDHARALYKVVTEG-KAGETYNIGGHN  262 (352)
T ss_pred             EEeCCCCeEEeeEEHHHHHHHHHHHHhcC-CCCceEEeCCCC
Confidence            111      34689999999999888753 357889987664

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.81  E-value=1.5e-18  Score=143.46  Aligned_cols=215  Identities=20%  Similarity=0.153  Sum_probs=155.0

Q ss_pred             EEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhH-HHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          8 LVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGE-SVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         8 lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |||||+|.||++++++|.++|  ++|.+.+++..... ....+. ....++.+|++|++++.++++       +.|++||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V~H   72 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVVFH   72 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc-cceeEEEeccccHHHHHHHhc-------CCceEEE
Confidence            699999999999999999999  78888888665432 111211 223399999999999999998       6799999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC---C-----
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG---Q-----  156 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~---~-----  156 (254)
                      +|+.....           .....+..+++|+.|+.+++++....    .      -.++|++||..+..+   .     
T Consensus        73 ~Aa~~~~~-----------~~~~~~~~~~vNV~GT~nvl~aa~~~----~------VkrlVytSS~~vv~~~~~~~~~~~  131 (280)
T PF01073_consen   73 TAAPVPPW-----------GDYPPEEYYKVNVDGTRNVLEAARKA----G------VKRLVYTSSISVVFDNYKGDPIIN  131 (280)
T ss_pred             eCcccccc-----------CcccHHHHHHHHHHHHHHHHHHHHHc----C------CCEEEEEcCcceeEeccCCCCccc
Confidence            99864321           22446788999999999999987753    2      468999999987654   1     


Q ss_pred             ---------CCCccchhchHHHHHhHHHHHH-Hhc-cCCcEEEEEecCCccccccccchHHHHHHHHhc-----CCC---
Q psy12833        157 ---------SGQVAYSASKSGIVGMTLPMAR-DLA-GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-----IPA---  217 (254)
Q Consensus       157 ---------~~~~~Y~~sK~a~~~~~~~la~-e~~-~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~-----~~~---  217 (254)
                               .....|+.||+..+.++..... ++. ...++..+++|..+..|......+...+.....     +..   
T Consensus       132 ~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~  211 (280)
T PF01073_consen  132 GDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNN  211 (280)
T ss_pred             CCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCc
Confidence                     1344899999999998877654 111 125888999999998876544433333333222     111   


Q ss_pred             CCCCCCHHHHHHHHHHHhc----C---CCcccceEEecCCc
Q psy12833        218 PQRLGHPDEFAQLVQSIIT----N---PLINGEVIRIDGAL  251 (254)
Q Consensus       218 ~~~~~~~~~va~~~~~l~~----~---~~~~G~~i~~~gG~  251 (254)
                      ...+.+++++|++.+-...    .   +...||.+.+..|.
T Consensus       212 ~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~  252 (280)
T PF01073_consen  212 LFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGE  252 (280)
T ss_pred             eECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCC
Confidence            0236689999998876653    2   57899999997664

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.81  E-value=4.2e-18  Score=144.10  Aligned_cols=208  Identities=24%  Similarity=0.226  Sum_probs=149.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +++||||+|+||+++++.|+++|++|++++|+.+......   ...+.++.+|++|++++.++++       ++|++||+
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~   71 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE---GLDVEIVEGDLRDPASLRKAVA-------GCRALFHV   71 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc---cCCceEEEeeCCCHHHHHHHHh-------CCCEEEEe
Confidence            7999999999999999999999999999999876543221   2358899999999998888776       68999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC--------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS--------  157 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~--------  157 (254)
                      ++....            ..++.+..+++|+.+..++++++...    .      -+++|++||...+.+.+        
T Consensus        72 a~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v~~SS~~~~~~~~~~~~~~e~  129 (328)
T TIGR03466        72 AADYRL------------WAPDPEEMYAANVEGTRNLLRAALEA----G------VERVVYTSSVATLGVRGDGTPADET  129 (328)
T ss_pred             ceeccc------------CCCCHHHHHHHHHHHHHHHHHHHHHh----C------CCeEEEEechhhcCcCCCCCCcCcc
Confidence            975321            11235677889999999998876542    2      35899999976554210        


Q ss_pred             -------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHH-HHHHHHhcCCC----CCCCCC
Q psy12833        158 -------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEK-VRNFLARSIPA----PQRLGH  223 (254)
Q Consensus       158 -------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~-~~~~~~~~~~~----~~~~~~  223 (254)
                             ....|+.+|.+.+.+++.++.+   .++++..++|+.+..+.....  ... ......+..+.    ...+++
T Consensus       130 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  206 (328)
T TIGR03466       130 TPSSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVH  206 (328)
T ss_pred             CCCCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEE
Confidence                   1347999999999999887664   478999999988876543211  111 11222222221    123578


Q ss_pred             HHHHHHHHHHHhcCCCcccceEEecC
Q psy12833        224 PDEFAQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       224 ~~~va~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      ++|+|++++.++..+ ..|+.+.+.|
T Consensus       207 v~D~a~a~~~~~~~~-~~~~~~~~~~  231 (328)
T TIGR03466       207 VDDVAEGHLLALERG-RIGERYILGG  231 (328)
T ss_pred             HHHHHHHHHHHHhCC-CCCceEEecC
Confidence            999999999888654 4688887753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.81  E-value=7.1e-18  Score=146.13  Aligned_cols=217  Identities=15%  Similarity=0.224  Sum_probs=148.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHH----hCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKE----LGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +.+++|||||+|.||++++++|.++ |++|++++|+.+....+...    ...++.++.+|+.|.+++.++++       
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-------   85 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-------   85 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-------
Confidence            4468999999999999999999998 58999999876654433221    12368899999999998887775       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-  156 (254)
                      .+|+|||+|+........          .+....+..|+.+..++++++...           ..++|++||...+... 
T Consensus        86 ~~d~ViHlAa~~~~~~~~----------~~~~~~~~~n~~gt~~ll~aa~~~-----------~~r~v~~SS~~vYg~~~  144 (386)
T PLN02427         86 MADLTINLAAICTPADYN----------TRPLDTIYSNFIDALPVVKYCSEN-----------NKRLIHFSTCEVYGKTI  144 (386)
T ss_pred             cCCEEEEcccccChhhhh----------hChHHHHHHHHHHHHHHHHHHHhc-----------CCEEEEEeeeeeeCCCc
Confidence            479999999864322111          112234567899988887766431           2479999997543210 


Q ss_pred             --------C------------------------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--
Q psy12833        157 --------S------------------------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--  202 (254)
Q Consensus       157 --------~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--  202 (254)
                              |                        +...|+.+|.+.+.+++.++.   ..++.+..++|+.+..+....  
T Consensus       145 ~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilR~~~vyGp~~~~~~  221 (386)
T PLN02427        145 GSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIP  221 (386)
T ss_pred             CCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHh---hcCCceEEecccceeCCCCCccc
Confidence                    0                        123699999999998877654   357999999999888764211  


Q ss_pred             -----------chHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHhcCC-CcccceEEecCC
Q psy12833        203 -----------LNEKVRNFLARSIPA--------PQRLGHPDEFAQLVQSIITNP-LINGEVIRIDGA  250 (254)
Q Consensus       203 -----------~~~~~~~~~~~~~~~--------~~~~~~~~~va~~~~~l~~~~-~~~G~~i~~~gG  250 (254)
                                 ..........+..+.        ...+++++|+|++++.++..+ ...|+++++.+|
T Consensus       222 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~  289 (386)
T PLN02427        222 GIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNP  289 (386)
T ss_pred             cccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCC
Confidence                       011111222221111        024789999999999998754 356889999765

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.81  E-value=1.2e-18  Score=142.27  Aligned_cols=212  Identities=18%  Similarity=0.168  Sum_probs=137.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-HHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-EDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~id~   81 (254)
                      ++++++||||+|+||++++++|+++|++|+++.|+.++.+....+ +.++.++++|++|. +++.+.+   .   .++|+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~l~~~~---~---~~~d~   88 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ-DPSLQIVRADVTEGSDKLVEAI---G---DDSDA   88 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc-CCceEEEEeeCCCCHHHHHHHh---h---cCCCE
Confidence            468999999999999999999999999999999987665443322 34688999999983 3332222   1   26999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc---CCCC
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE---GQSG  158 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~---~~~~  158 (254)
                      +|+|+|.....   +       .    ...+++|..+..++++++.    +.+      .++||++||...+.   +.+.
T Consensus        89 vi~~~g~~~~~---~-------~----~~~~~~n~~~~~~ll~a~~----~~~------~~~iV~iSS~~v~g~~~~~~~  144 (251)
T PLN00141         89 VICATGFRRSF---D-------P----FAPWKVDNFGTVNLVEACR----KAG------VTRFILVSSILVNGAAMGQIL  144 (251)
T ss_pred             EEECCCCCcCC---C-------C----CCceeeehHHHHHHHHHHH----HcC------CCEEEEEccccccCCCccccc
Confidence            99998864211   1       0    0113577778888877763    232      47899999986443   2223


Q ss_pred             CccchhchHHHHHh-HHHHHHH-hccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGM-TLPMARD-LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~-~~~la~e-~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ...|...|.....+ .+..+.+ +...|++++.++||++.++......   . ........ ...++++|+|+.+..++.
T Consensus       145 ~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~---~-~~~~~~~~-~~~i~~~dvA~~~~~~~~  219 (251)
T PLN00141        145 NPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNI---V-MEPEDTLY-EGSISRDQVAEVAVEALL  219 (251)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceE---E-ECCCCccc-cCcccHHHHHHHHHHHhc
Confidence            34566655543332 2333333 4567999999999999776432100   0 00000111 346899999999999997


Q ss_pred             CCCcccceEEecCC
Q psy12833        237 NPLINGEVIRIDGA  250 (254)
Q Consensus       237 ~~~~~G~~i~~~gG  250 (254)
                      ++.-.+.++.+-++
T Consensus       220 ~~~~~~~~~~~~~~  233 (251)
T PLN00141        220 CPESSYKVVEIVAR  233 (251)
T ss_pred             ChhhcCcEEEEecC
Confidence            65445666666543

>PLN02686 cinnamoyl-CoA reductase

Probab=99.81  E-value=5.7e-18  Score=145.58  Aligned_cols=216  Identities=16%  Similarity=0.136  Sum_probs=146.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH--h------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE--L------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~--~------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      .++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+.+.  .      ..++.++.+|++|.+++.++++   
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~---  127 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD---  127 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH---
Confidence            3579999999999999999999999999999888876655444221  0      1257889999999999988887   


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc-
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-  152 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~-  152 (254)
                          ++|.+||+++.........          ......++|+.+..++++++...   ..      -.++|++||..+ 
T Consensus       128 ----~~d~V~hlA~~~~~~~~~~----------~~~~~~~~nv~gt~~llea~~~~---~~------v~r~V~~SS~~~~  184 (367)
T PLN02686        128 ----GCAGVFHTSAFVDPAGLSG----------YTKSMAELEAKASENVIEACVRT---ES------VRKCVFTSSLLAC  184 (367)
T ss_pred             ----hccEEEecCeeeccccccc----------ccchhhhhhHHHHHHHHHHHHhc---CC------ccEEEEeccHHHh
Confidence                4689999988643221100          01234567888888887775532   11      347999999631 


Q ss_pred             -c-----c--C--------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHH
Q psy12833        153 -Y-----E--G--------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRN  209 (254)
Q Consensus       153 -~-----~--~--------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~  209 (254)
                       +     .  +              ..+...|+.+|.+.+.+++.++.+   +|++++.++|+.+.+|..... ......
T Consensus       185 vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~  261 (367)
T PLN02686        185 VWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIA  261 (367)
T ss_pred             cccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHH
Confidence             1     0  0              012346999999999999887765   589999999999999853211 111112


Q ss_pred             HHHhcCCCC--C--CCCCHHHHHHHHHHHhcC--CCcccceEE
Q psy12833        210 FLARSIPAP--Q--RLGHPDEFAQLVQSIITN--PLINGEVIR  246 (254)
Q Consensus       210 ~~~~~~~~~--~--~~~~~~~va~~~~~l~~~--~~~~G~~i~  246 (254)
                      ......+..  +  .+.+++|++++++.++..  +...|+.+.
T Consensus       262 ~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~yi  304 (367)
T PLN02686        262 YLKGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRYI  304 (367)
T ss_pred             HhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcEE
Confidence            222222211  2  367999999999998863  223455553

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.80  E-value=1.1e-17  Score=133.83  Aligned_cols=219  Identities=22%  Similarity=0.189  Sum_probs=162.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCc--hhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTS--EGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++|||||.|.||++.++.+.++.-  +|+..+.-.-  ..+.+..-. ..++.|++.|+.|.+.+.+++++-     ++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            3799999999999999999887753  4676665221  222222222 468999999999999998888865     79


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-----
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-----  154 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-----  154 (254)
                      |+++|-|+-+...          .+..+....++.|+.|++.+++++......         .+++.||.-..+.     
T Consensus        76 D~VvhfAAESHVD----------RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---------frf~HISTDEVYG~l~~~  136 (340)
T COG1088          76 DAVVHFAAESHVD----------RSIDGPAPFIQTNVVGTYTLLEAARKYWGK---------FRFHHISTDEVYGDLGLD  136 (340)
T ss_pred             CeEEEechhcccc----------ccccChhhhhhcchHHHHHHHHHHHHhccc---------ceEEEeccccccccccCC
Confidence            9999999876533          477777888999999999999999887542         4788888744332     


Q ss_pred             --------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc--ccchHHHHHHHHhcCCCC------
Q psy12833        155 --------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL--SMLNEKVRNFLARSIPAP------  218 (254)
Q Consensus       155 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~--~~~~~~~~~~~~~~~~~~------  218 (254)
                              |..+.+.|++|||+.+.+++++.+-|   |+.++...+..-..|-+  +++.+..........|.|      
T Consensus       137 ~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~  213 (340)
T COG1088         137 DDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGL  213 (340)
T ss_pred             CCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCc
Confidence                    23467899999999999999998865   78888887766666543  333333322222222222      


Q ss_pred             --CCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        219 --QRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       219 --~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                        +.++.++|=+.++..++....+ |+++++.||.
T Consensus       214 ~iRDWl~VeDh~~ai~~Vl~kg~~-GE~YNIgg~~  247 (340)
T COG1088         214 QIRDWLYVEDHCRAIDLVLTKGKI-GETYNIGGGN  247 (340)
T ss_pred             ceeeeEEeHhHHHHHHHHHhcCcC-CceEEeCCCc
Confidence              4678999999999999976545 9999999885

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.80  E-value=2.1e-17  Score=140.58  Aligned_cols=220  Identities=17%  Similarity=0.151  Sum_probs=145.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH---HHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~---~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++|||||+|+||++++++|+++|++|++++|.........   .+. +.++.++.+|++|++++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            6999999999999999999999999998876533222211   122 34578899999999998888764     27999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-----
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-----  156 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-----  156 (254)
                      +||+|+......          ..+.....+++|+.++.++++++..    ..      .+++|++||...+...     
T Consensus        77 vvh~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~~~~v~~Ss~~~yg~~~~~~~  136 (338)
T PRK10675         77 VIHFAGLKAVGE----------SVQKPLEYYDNNVNGTLRLISAMRA----AN------VKNLIFSSSATVYGDQPKIPY  136 (338)
T ss_pred             EEECCccccccc----------hhhCHHHHHHHHHHHHHHHHHHHHH----cC------CCEEEEeccHHhhCCCCCCcc
Confidence            999998643211          1233456788999999998876443    22      3589999997644211     


Q ss_pred             -------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccc--------c----ccchHHHHHHHHhcC--
Q psy12833        157 -------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL--------L----SMLNEKVRNFLARSI--  215 (254)
Q Consensus       157 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~--------~----~~~~~~~~~~~~~~~--  215 (254)
                             .+...|+.+|.+.+.+++.++++..  ++++..++|+.+..+.        .    ...............  
T Consensus       137 ~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  214 (338)
T PRK10675        137 VESFPTGTPQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDS  214 (338)
T ss_pred             ccccCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCc
Confidence                   2357899999999999999876542  4566666643332221        0    111111122221111  


Q ss_pred             --------CCC-----CCCCCHHHHHHHHHHHhcC--CCcccceEEecCCcc
Q psy12833        216 --------PAP-----QRLGHPDEFAQLVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       216 --------~~~-----~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                              +.+     ..+++++|+|++++.++..  ....|+++++.+|..
T Consensus       215 ~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~  266 (338)
T PRK10675        215 LAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_pred             eEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCc
Confidence                    100     2468999999999888863  223468999987753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.80  E-value=8.9e-18  Score=135.52  Aligned_cols=211  Identities=23%  Similarity=0.313  Sum_probs=158.7

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a   86 (254)
                      ||||||+|.||++++++|.++|+.|+...|+.........+.  ++.++.+|+.|.++++++++..     ++|++||+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--TEEEEESETTSHHHHHHHHHHH-----TESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--eEEEEEeecccccccccccccc-----CceEEEEee
Confidence            699999999999999999999999998888776655444332  7899999999999999999987     899999999


Q ss_pred             ccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC----------
Q psy12833         87 GISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ----------  156 (254)
Q Consensus        87 g~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~----------  156 (254)
                      +.....          ...+.....++.|+.+..++++++...    +      ..+++++||...+...          
T Consensus        74 ~~~~~~----------~~~~~~~~~~~~n~~~~~~ll~~~~~~----~------~~~~i~~sS~~~y~~~~~~~~~e~~~  133 (236)
T PF01370_consen   74 AFSSNP----------ESFEDPEEIIEANVQGTRNLLEAAREA----G------VKRFIFLSSASVYGDPDGEPIDEDSP  133 (236)
T ss_dssp             SSSSHH----------HHHHSHHHHHHHHHHHHHHHHHHHHHH----T------TSEEEEEEEGGGGTSSSSSSBETTSG
T ss_pred             cccccc----------ccccccccccccccccccccccccccc----c------cccccccccccccccccccccccccc
Confidence            864311          123556677788888877777666643    2      3589999997554332          


Q ss_pred             -CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccc-----cccchHHHHHHHHhcCC----C----CCCCC
Q psy12833        157 -SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL-----LSMLNEKVRNFLARSIP----A----PQRLG  222 (254)
Q Consensus       157 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~-----~~~~~~~~~~~~~~~~~----~----~~~~~  222 (254)
                       .+...|+.+|...+.+.+.+.+..   ++++..++|+.+-.+.     .......+........+    .    ...++
T Consensus       134 ~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  210 (236)
T PF01370_consen  134 INPLSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFI  210 (236)
T ss_dssp             CCHSSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEE
T ss_pred             ccccccccccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceE
Confidence             134579999999999998887765   7999999999887776     12223444444433221    1    13457


Q ss_pred             CHHHHHHHHHHHhcCCCcccceEEe
Q psy12833        223 HPDEFAQLVQSIITNPLINGEVIRI  247 (254)
Q Consensus       223 ~~~~va~~~~~l~~~~~~~G~~i~~  247 (254)
                      +++|+|++++.+++.+...|+.+++
T Consensus       211 ~v~D~a~~~~~~~~~~~~~~~~yNi  235 (236)
T PF01370_consen  211 HVDDLAEAIVAALENPKAAGGIYNI  235 (236)
T ss_dssp             EHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred             EHHHHHHHHHHHHhCCCCCCCEEEe
Confidence            9999999999999866578888886

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.79  E-value=1.9e-17  Score=143.42  Aligned_cols=223  Identities=20%  Similarity=0.169  Sum_probs=176.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhC-----CCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELG-----PDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      |++||++|||||+|-||+++++++++.+. ++++.+|++.+...+..++.     .++.++-+|+.|.+.+.+++++.  
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence            57899999999999999999999999885 78899999988888877772     56889999999999999999865  


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                         ++|+++|.|+.-..+          .-.....+.+..|++|+.+.++++...-.          .++|.+|+-.+..
T Consensus       325 ---kvd~VfHAAA~KHVP----------l~E~nP~Eai~tNV~GT~nv~~aa~~~~V----------~~~V~iSTDKAV~  381 (588)
T COG1086         325 ---KVDIVFHAAALKHVP----------LVEYNPEEAIKTNVLGTENVAEAAIKNGV----------KKFVLISTDKAVN  381 (588)
T ss_pred             ---CCceEEEhhhhccCc----------chhcCHHHHHHHhhHhHHHHHHHHHHhCC----------CEEEEEecCcccC
Confidence               799999999975443          23345677899999999999999887543          4799999977766


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCC-------CCCCCCHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA-------PQRLGHPDEF  227 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v  227 (254)
                      |   ...|+++|...+.++.+++......+-++.+++=|.+-...-. .-+-+.+++.+.-|.       -+.+++.+|.
T Consensus       382 P---tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS-ViPlFk~QI~~GgplTvTdp~mtRyfMTI~EA  457 (588)
T COG1086         382 P---TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS-VIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEA  457 (588)
T ss_pred             C---chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC-CHHHHHHHHHcCCCccccCCCceeEEEEHHHH
Confidence            5   4689999999999999998877766788999988888654321 234445555554331       1456788999


Q ss_pred             HHHHHHHhcCCCcccceEEecCCccc
Q psy12833        228 AQLVQSIITNPLINGEVIRIDGALRM  253 (254)
Q Consensus       228 a~~~~~l~~~~~~~G~~i~~~gG~~~  253 (254)
                      ++.++....-. -.|+++.+|-|..+
T Consensus       458 v~LVlqA~a~~-~gGeifvldMGepv  482 (588)
T COG1086         458 VQLVLQAGAIA-KGGEIFVLDMGEPV  482 (588)
T ss_pred             HHHHHHHHhhc-CCCcEEEEcCCCCe
Confidence            99888888532 36889989988653

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.78  E-value=6.9e-17  Score=136.50  Aligned_cols=220  Identities=20%  Similarity=0.143  Sum_probs=149.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++|||||+|+||++++++|.++|++|++++|......+...+..  .++.++.+|++|++++.++++.     .++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            47999999999999999999999999888764433222222211  2577889999999999988874     3799999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-------
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-------  156 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-------  156 (254)
                      ||||.....          ...++....+..|+.+...+++++..    ..      .++++++||...+...       
T Consensus        76 ~~ag~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~~~~v~~ss~~~~g~~~~~~~~e  135 (328)
T TIGR01179        76 HFAGLIAVG----------ESVQDPLKYYRNNVVNTLNLLEAMQQ----TG------VKKFIFSSSAAVYGEPSSIPISE  135 (328)
T ss_pred             ECccccCcc----------hhhcCchhhhhhhHHHHHHHHHHHHh----cC------CCEEEEecchhhcCCCCCCCccc
Confidence            999965321          12233456788899999998876432    22      3589999886544211       


Q ss_pred             ----CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-----------chHHHHHHHHhc-------
Q psy12833        157 ----SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-----------LNEKVRNFLARS-------  214 (254)
Q Consensus       157 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-----------~~~~~~~~~~~~-------  214 (254)
                          .+...|+.+|++.+.+++.++.+.  .++++..++|+.+..+....           ..........+.       
T Consensus       136 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (328)
T TIGR01179       136 DSPLGPINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIF  213 (328)
T ss_pred             cCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEe
Confidence                234679999999999999887652  47889999997776652110           111111111111       


Q ss_pred             ---CCCC-----CCCCCHHHHHHHHHHHhcC--CCcccceEEecCCcc
Q psy12833        215 ---IPAP-----QRLGHPDEFAQLVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       215 ---~~~~-----~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                         .+.+     ..+++++|+++++..++..  ....|+.+++.+|..
T Consensus       214 ~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~  261 (328)
T TIGR01179       214 GTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQG  261 (328)
T ss_pred             CCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCc
Confidence               1110     2357899999999999853  234578898877653

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.78  E-value=1.7e-17  Score=143.60  Aligned_cols=207  Identities=18%  Similarity=0.173  Sum_probs=144.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHH-----HHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGES-----VAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~-----~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      .+++++|||||+|+||++++++|.++|++|+++.|+.+..+.     ...+...++.++.+|++|++++.++++...   
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~---  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG---  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC---
Confidence            467899999999999999999999999999999998754321     011113468899999999999999887541   


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      .++|+||||++.....           .    ...+++|+.+..++++++.    +..      -+++|++||.+...+ 
T Consensus       135 ~~~D~Vi~~aa~~~~~-----------~----~~~~~vn~~~~~~ll~aa~----~~g------v~r~V~iSS~~v~~p-  188 (390)
T PLN02657        135 DPVDVVVSCLASRTGG-----------V----KDSWKIDYQATKNSLDAGR----EVG------AKHFVLLSAICVQKP-  188 (390)
T ss_pred             CCCcEEEECCccCCCC-----------C----ccchhhHHHHHHHHHHHHH----HcC------CCEEEEEeeccccCc-
Confidence            1699999998842110           1    1224567777777776654    222      468999999876543 


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCC----CCC-----CCCCHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP----APQ-----RLGHPDEF  227 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~v  227 (254)
                        ...|..+|...+...+.     ...++++..++|+.+..++..     ..+......+    ..+     ..++++|+
T Consensus       189 --~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~-----~~~~~~~g~~~~~~GdG~~~~~~~I~v~Dl  256 (390)
T PLN02657        189 --LLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG-----QVEIVKDGGPYVMFGDGKLCACKPISEADL  256 (390)
T ss_pred             --chHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHH-----HHHhhccCCceEEecCCcccccCceeHHHH
Confidence              34678888887776543     246899999999887654321     1111111111    001     24789999


Q ss_pred             HHHHHHHhcCCCcccceEEecC
Q psy12833        228 AQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       228 a~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      |..+..++.++...|+++++.|
T Consensus       257 A~~i~~~~~~~~~~~~~~~Igg  278 (390)
T PLN02657        257 ASFIADCVLDESKINKVLPIGG  278 (390)
T ss_pred             HHHHHHHHhCccccCCEEEcCC
Confidence            9999999876556789999976

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.77  E-value=8e-17  Score=138.11  Aligned_cols=217  Identities=17%  Similarity=0.195  Sum_probs=144.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchh---HHHHH---Hh-------C-CCceEEecCCCCHHH--HHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEG---ESVAK---EL-------G-PDVKFAPVDVTSEED--VQK   67 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~---~~~~~---~~-------~-~~~~~~~~Dls~~~~--~~~   67 (254)
                      +++||||||+||++++++|+++|  ++|+++.|+.+..   +++.+   ..       . .++.++.+|++++..  -..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7899999976632   12221   11       1 478899999986531  011


Q ss_pred             HHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEE
Q psy12833         68 AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINT  147 (254)
Q Consensus        68 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~v  147 (254)
                      .+..+.   ..+|++||||+....             ...++...++|+.+...+++.+..    ..      ..+++++
T Consensus        81 ~~~~~~---~~~d~vih~a~~~~~-------------~~~~~~~~~~nv~g~~~ll~~a~~----~~------~~~~v~i  134 (367)
T TIGR01746        81 EWERLA---ENVDTIVHNGALVNW-------------VYPYSELRAANVLGTREVLRLAAS----GR------AKPLHYV  134 (367)
T ss_pred             HHHHHH---hhCCEEEeCCcEecc-------------CCcHHHHhhhhhHHHHHHHHHHhh----CC------CceEEEE
Confidence            112222   379999999986421             122456678999999888876654    22      3469999


Q ss_pred             eccccccCC----------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHHHH
Q psy12833        148 ASIAAYEGQ----------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVR  208 (254)
Q Consensus       148 ss~~~~~~~----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~~~  208 (254)
                      ||.......                .....|+.+|.+.+.+++.++.    .|++++.++||.+.++.....   .....
T Consensus       135 SS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~  210 (367)
T TIGR01746       135 STISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILW  210 (367)
T ss_pred             ccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHH
Confidence            998765431                1134799999999988876543    389999999999987522110   11111


Q ss_pred             HHH-----HhcCCCC----CCCCCHHHHHHHHHHHhcCCC--cccceEEecCCcc
Q psy12833        209 NFL-----ARSIPAP----QRLGHPDEFAQLVQSIITNPL--INGEVIRIDGALR  252 (254)
Q Consensus       209 ~~~-----~~~~~~~----~~~~~~~~va~~~~~l~~~~~--~~G~~i~~~gG~~  252 (254)
                      ..+     ....|..    ..+.+++++++++..++..+.  .+|+++++.++..
T Consensus       211 ~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~  265 (367)
T TIGR01746       211 RMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEP  265 (367)
T ss_pred             HHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCC
Confidence            111     1122221    226789999999999986543  3589999987643

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.77  E-value=7.3e-17  Score=137.86  Aligned_cols=213  Identities=17%  Similarity=0.189  Sum_probs=145.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCC-CHHHHHHHHHHHHHHcCCCcEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT-SEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls-~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +++|||||+|.||++++++|.++ |++|+.++|+.+.......  ...+.++.+|+. +.+.+.++++       ++|+|
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~V   72 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN--HPRMHFFEGDITINKEWIEYHVK-------KCDVI   72 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc--CCCeEEEeCCCCCCHHHHHHHHc-------CCCEE
Confidence            37999999999999999999986 6999999987644332221  235889999998 6666655544       68999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC------
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ------  156 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~------  156 (254)
                      ||+|+......          ..++.+..+++|+.+..++++++..    .       ..++|++||...+.+.      
T Consensus        73 iH~aa~~~~~~----------~~~~p~~~~~~n~~~~~~ll~aa~~----~-------~~~~v~~SS~~vyg~~~~~~~~  131 (347)
T PRK11908         73 LPLVAIATPAT----------YVKQPLRVFELDFEANLPIVRSAVK----Y-------GKHLVFPSTSEVYGMCPDEEFD  131 (347)
T ss_pred             EECcccCChHH----------hhcCcHHHHHHHHHHHHHHHHHHHh----c-------CCeEEEEecceeeccCCCcCcC
Confidence            99998643221          1223456789999999888777653    1       2479999997544210      


Q ss_pred             ------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----------chHHHHHHHHhc
Q psy12833        157 ------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----------LNEKVRNFLARS  214 (254)
Q Consensus       157 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----------~~~~~~~~~~~~  214 (254)
                                  .+...|+.+|.+.+.+.+.++..   .++.+..+.|+.+..+....          ........+...
T Consensus       132 ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~  208 (347)
T PRK11908        132 PEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRG  208 (347)
T ss_pred             ccccccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCC
Confidence                        11236999999999988887654   47788888887776653211          112222222111


Q ss_pred             CC--C------CCCCCCHHHHHHHHHHHhcCCC--cccceEEecCC
Q psy12833        215 IP--A------PQRLGHPDEFAQLVQSIITNPL--INGEVIRIDGA  250 (254)
Q Consensus       215 ~~--~------~~~~~~~~~va~~~~~l~~~~~--~~G~~i~~~gG  250 (254)
                      .+  .      ...+++++|+++++..++..+.  ..|+++++.++
T Consensus       209 ~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        209 EPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             CceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            11  0      1347899999999999997542  56899999764

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.76  E-value=9.3e-17  Score=147.80  Aligned_cols=216  Identities=17%  Similarity=0.197  Sum_probs=149.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHH-HHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEED-VQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~-~~~~~~~~~~~~~~id   80 (254)
                      +++++|||||+|.||++++++|.++ |++|+.++|+.........  ..++.++.+|++|.++ ++++++       ++|
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~--~~~~~~~~gDl~d~~~~l~~~l~-------~~D  384 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG--HPRFHFVEGDISIHSEWIEYHIK-------KCD  384 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC--CCceEEEeccccCcHHHHHHHhc-------CCC
Confidence            4679999999999999999999986 7999999997654332211  2468899999998664 344443       689


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ----  156 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~----  156 (254)
                      +|||+|+......          ..++.+..+++|+.+..++++++...           ..++|++||...+...    
T Consensus       385 ~ViHlAa~~~~~~----------~~~~~~~~~~~Nv~~t~~ll~a~~~~-----------~~~~V~~SS~~vyg~~~~~~  443 (660)
T PRK08125        385 VVLPLVAIATPIE----------YTRNPLRVFELDFEENLKIIRYCVKY-----------NKRIIFPSTSEVYGMCTDKY  443 (660)
T ss_pred             EEEECccccCchh----------hccCHHHHHHhhHHHHHHHHHHHHhc-----------CCeEEEEcchhhcCCCCCCC
Confidence            9999999754321          11223456789999999988887642           2479999997544210    


Q ss_pred             -----------C---CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----------chHHHHHHHH
Q psy12833        157 -----------S---GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----------LNEKVRNFLA  212 (254)
Q Consensus       157 -----------~---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----------~~~~~~~~~~  212 (254)
                                 |   +...|+.+|.+.+.+++.++..   +|+++..+.|+.+..+....          ....+.....
T Consensus       444 ~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~  520 (660)
T PRK08125        444 FDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLV  520 (660)
T ss_pred             cCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhc
Confidence                       1   1236999999999999887665   37899999999887764321          1112222221


Q ss_pred             hcCC--C------CCCCCCHHHHHHHHHHHhcCC--CcccceEEecCCc
Q psy12833        213 RSIP--A------PQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGAL  251 (254)
Q Consensus       213 ~~~~--~------~~~~~~~~~va~~~~~l~~~~--~~~G~~i~~~gG~  251 (254)
                      ...+  .      ...+++++|++++++.++..+  ...|+++++.+|.
T Consensus       521 ~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        521 EGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            1111  0      034779999999999998643  3468999998763

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.76  E-value=2e-16  Score=131.60  Aligned_cols=194  Identities=16%  Similarity=0.176  Sum_probs=137.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|.||++++++|.++|++|+++.|+                  .+|+.|+++++++++..     ++|++||+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------~~d~~~~~~~~~~~~~~-----~~d~vi~~   57 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------QLDLTDPEALERLLRAI-----RPDAVVNT   57 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------ccCCCCHHHHHHHHHhC-----CCCEEEEC
Confidence            37999999999999999999999999998884                  47999999999888753     68999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC----------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG----------  155 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~----------  155 (254)
                      ++.....          .........+++|+.+..++++++..    .       ..++|++||...+.+          
T Consensus        58 a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~----~-------~~~~v~~Ss~~vy~~~~~~~~~E~~  116 (287)
T TIGR01214        58 AAYTDVD----------GAESDPEKAFAVNALAPQNLARAAAR----H-------GARLVHISTDYVFDGEGKRPYREDD  116 (287)
T ss_pred             Ccccccc----------ccccCHHHHHHHHHHHHHHHHHHHHH----c-------CCeEEEEeeeeeecCCCCCCCCCCC
Confidence            9864211          11223456788999999999887643    2       247999999754322          


Q ss_pred             -CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc-ccchHHHHHHHHhcCC------CCCCCCCHHHH
Q psy12833        156 -QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIP------APQRLGHPDEF  227 (254)
Q Consensus       156 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~v  227 (254)
                       ..+...|+.+|.+.+.+++.+       +.++..++|+.+..+.. ............+..+      .....++++|+
T Consensus       117 ~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  189 (287)
T TIGR01214       117 ATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDL  189 (287)
T ss_pred             CCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHH
Confidence             113457999999988888764       45788999999877653 1212222222222111      11345678999


Q ss_pred             HHHHHHHhcCCCcccceEEecCC
Q psy12833        228 AQLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       228 a~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      |+++..++..+...++.+++-++
T Consensus       190 a~a~~~~~~~~~~~~~~~ni~~~  212 (287)
T TIGR01214       190 ARVIAALLQRLARARGVYHLANS  212 (287)
T ss_pred             HHHHHHHHhhccCCCCeEEEECC
Confidence            99999999754334667777544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.75  E-value=1.5e-17  Score=135.53  Aligned_cols=216  Identities=19%  Similarity=0.168  Sum_probs=152.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHh-----CCCceE----EecCCCCHHHHHHHHHHHHHHc
Q psy12833          7 GLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKEL-----GPDVKF----APVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~-----~~~~~~----~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +|||||+|-||++++++|++.+ .++++++|++..+-++..++     +.++.+    +.+|+.|.+.+++++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            6999999999999999999988 47999999999998888877     234543    478999999999888866    


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                       ++|+++|.|+.-....          -.+...+.++.|+.|+.++++++..+-          -.++|++|+--+..| 
T Consensus        77 -~pdiVfHaAA~KhVpl----------~E~~p~eav~tNv~GT~nv~~aa~~~~----------v~~~v~ISTDKAv~P-  134 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPL----------MEDNPFEAVKTNVLGTQNVAEAAIEHG----------VERFVFISTDKAVNP-  134 (293)
T ss_dssp             -T-SEEEE------HHH----------HCCCHHHHHHHHCHHHHHHHHHHHHTT-----------SEEEEEEECGCSS--
T ss_pred             -CCCEEEEChhcCCCCh----------HHhCHHHHHHHHHHHHHHHHHHHHHcC----------CCEEEEccccccCCC-
Confidence             8999999998654332          123457779999999999999988753          358999999877664 


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCC-------CCCCCCHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA-------PQRLGHPDEFAQ  229 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~va~  229 (254)
                        ...|++||...+.++...+......+.++.+|+=|.+-...- ...+-+.+++.+.-|.       -+.+++++|.++
T Consensus       135 --tnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G-SVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~  211 (293)
T PF02719_consen  135 --TNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG-SVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQ  211 (293)
T ss_dssp             ---SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT-SCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHH
T ss_pred             --CcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC-cHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHH
Confidence              468999999999999999888877788999998888855321 1235555666554331       145779999999


Q ss_pred             HHHHHhcCCCcccceEEecCCcc
Q psy12833        230 LVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       230 ~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      .++..+.-. ..|+++.+|-|..
T Consensus       212 Lvl~a~~~~-~~geifvl~mg~~  233 (293)
T PF02719_consen  212 LVLQAAALA-KGGEIFVLDMGEP  233 (293)
T ss_dssp             HHHHHHHH---TTEEEEE---TC
T ss_pred             HHHHHHhhC-CCCcEEEecCCCC
Confidence            999888522 2588888887754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.74  E-value=4.9e-16  Score=143.51  Aligned_cols=221  Identities=18%  Similarity=0.176  Sum_probs=151.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc--CCEEEEeeCCC--chhHHHHHH-hCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE--GGRVVLCDLPT--SEGESVAKE-LGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~--g~~v~~~~r~~--~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++++|||||+|.||++++++|.++  +++|+.++|..  +....+... ...++.++.+|++|.+.+..++..     .
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~   79 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----E   79 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-----c
Confidence            4689999999999999999999988  67898888742  222222211 134688999999999887766532     2


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC--
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--  155 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~--  155 (254)
                      ++|+|||+|+.....          ....+....+++|+.++.++++++...   ..      .+++|++||...+..  
T Consensus        80 ~~D~ViHlAa~~~~~----------~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~------vkr~I~~SS~~vyg~~~  140 (668)
T PLN02260         80 GIDTIMHFAAQTHVD----------NSFGNSFEFTKNNIYGTHVLLEACKVT---GQ------IRRFIHVSTDEVYGETD  140 (668)
T ss_pred             CCCEEEECCCccCch----------hhhhCHHHHHHHHHHHHHHHHHHHHhc---CC------CcEEEEEcchHHhCCCc
Confidence            799999999965321          122334567789999999988776542   11      358999999754321  


Q ss_pred             ------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc--cchHHHHHHHHhc--CCCC-
Q psy12833        156 ------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARS--IPAP-  218 (254)
Q Consensus       156 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~--~~~~-  218 (254)
                                  ..+...|+.+|.+.+.+++.++.+   .++.+..++|+.+..+...  ...+.+.......  ++.. 
T Consensus       141 ~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g  217 (668)
T PLN02260        141 EDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHG  217 (668)
T ss_pred             cccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEec
Confidence                        113457999999999999887665   3788999999988776432  1122222222211  1110 


Q ss_pred             -----CCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        219 -----QRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       219 -----~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                           ..+++++|+|+++..++... ..|+++++.++.
T Consensus       218 ~g~~~r~~ihV~Dva~a~~~~l~~~-~~~~vyni~~~~  254 (668)
T PLN02260        218 DGSNVRSYLYCEDVAEAFEVVLHKG-EVGHVYNIGTKK  254 (668)
T ss_pred             CCCceEeeEEHHHHHHHHHHHHhcC-CCCCEEEECCCC
Confidence                 23578999999999888653 347888887664

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.74  E-value=4.2e-16  Score=134.19  Aligned_cols=217  Identities=17%  Similarity=0.096  Sum_probs=148.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      -+++++|||||+|.||++++++|.++|++|+.++|......   ........++.+|+.|.+++.++++       ++|+
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   88 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---SEDMFCHEFHLVDLRVMENCLKVTK-------GVDH   88 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---ccccccceEEECCCCCHHHHHHHHh-------CCCE
Confidence            35789999999999999999999999999999998643211   1111135678899999888776664       6899


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-------  154 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-------  154 (254)
                      |||+|+.........         .+....+..|+.++.++++++...    .      .+++|++||...+.       
T Consensus        89 Vih~Aa~~~~~~~~~---------~~~~~~~~~N~~~t~nll~aa~~~----~------vk~~V~~SS~~vYg~~~~~~~  149 (370)
T PLN02695         89 VFNLAADMGGMGFIQ---------SNHSVIMYNNTMISFNMLEAARIN----G------VKRFFYASSACIYPEFKQLET  149 (370)
T ss_pred             EEEcccccCCccccc---------cCchhhHHHHHHHHHHHHHHHHHh----C------CCEEEEeCchhhcCCccccCc
Confidence            999998643221111         122345678999998888876432    2      35899999964321       


Q ss_pred             ----------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------cchHHHHHHHHh---cC
Q psy12833        155 ----------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------MLNEKVRNFLAR---SI  215 (254)
Q Consensus       155 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~~~~~~~---~~  215 (254)
                                +..+...|+.+|.+.+.+++.++..   .|+++..+.|+.+..|...      .....+......   .+
T Consensus       150 ~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (370)
T PLN02695        150 NVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEF  226 (370)
T ss_pred             CCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCe
Confidence                      2234568999999999998877654   4799999999988887421      112222222211   11


Q ss_pred             CC------CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        216 PA------PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       216 ~~------~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      +.      ...+++++|+++++..++..+  .++.+++-+|..
T Consensus       227 ~~~g~g~~~r~~i~v~D~a~ai~~~~~~~--~~~~~nv~~~~~  267 (370)
T PLN02695        227 EMWGDGKQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEM  267 (370)
T ss_pred             EEeCCCCeEEeEEeHHHHHHHHHHHHhcc--CCCceEecCCCc
Confidence            11      123689999999999987654  257788866643

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.74  E-value=2.9e-16  Score=131.99  Aligned_cols=210  Identities=15%  Similarity=0.114  Sum_probs=139.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHH--HcCCCcEEEe
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKD--SFGKLDVNVN   84 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--~~~~id~li~   84 (254)
                      +|||||+|.||++++++|+++|++++++.|+.+.....       ..+.++|+.|..+.+.+++.+.+  .++++|+|||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih   74 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFH   74 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEE
Confidence            79999999999999999999999777666654432211       12345788887777776666543  2457999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC---------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG---------  155 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~---------  155 (254)
                      +|+.....   .      ..   .+..++.|+.++.++++++..    .       ..++|++||...+.+         
T Consensus        75 ~A~~~~~~---~------~~---~~~~~~~n~~~t~~ll~~~~~----~-------~~~~i~~SS~~vyg~~~~~~~~E~  131 (308)
T PRK11150         75 EGACSSTT---E------WD---GKYMMDNNYQYSKELLHYCLE----R-------EIPFLYASSAATYGGRTDDFIEER  131 (308)
T ss_pred             CceecCCc---C------CC---hHHHHHHHHHHHHHHHHHHHH----c-------CCcEEEEcchHHhCcCCCCCCccC
Confidence            99854321   1      11   134689999999888887653    2       236999999764432         


Q ss_pred             --CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc---c---hHHHHHHHHhc-CC---C-----C
Q psy12833        156 --QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM---L---NEKVRNFLARS-IP---A-----P  218 (254)
Q Consensus       156 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~---~---~~~~~~~~~~~-~~---~-----~  218 (254)
                        ..+...|+.+|.+.+.+++.++.+   .++.+..++|+.+..+....   .   .........+. .+   .     .
T Consensus       132 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~  208 (308)
T PRK11150        132 EYEKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFK  208 (308)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCcee
Confidence              123467999999999988877654   47888999998887654311   1   11111222211 11   0     0


Q ss_pred             CCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        219 QRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       219 ~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      ..+++++|++++++.++..+.  +.++++-+|.
T Consensus       209 r~~i~v~D~a~a~~~~~~~~~--~~~yni~~~~  239 (308)
T PRK11150        209 RDFVYVGDVAAVNLWFWENGV--SGIFNCGTGR  239 (308)
T ss_pred             eeeeeHHHHHHHHHHHHhcCC--CCeEEcCCCC
Confidence            235799999999988886542  4588886664

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.73  E-value=8.9e-16  Score=134.59  Aligned_cols=211  Identities=17%  Similarity=0.190  Sum_probs=142.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH-HHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE-SVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~-~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++++|||||+|.||++++++|.++|++|++++|...... ...... ..++.++..|+.++.     +       .++|
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~~D  185 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LEVD  185 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cCCC
Confidence            4689999999999999999999999999999887543222 111112 345788889987652     1       1589


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-----  155 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-----  155 (254)
                      +|||+|+......          ...+....+++|+.++.++++++...           ..++|++||...+.+     
T Consensus       186 ~ViHlAa~~~~~~----------~~~~p~~~~~~Nv~gt~nLleaa~~~-----------g~r~V~~SS~~VYg~~~~~p  244 (442)
T PLN02206        186 QIYHLACPASPVH----------YKFNPVKTIKTNVVGTLNMLGLAKRV-----------GARFLLTSTSEVYGDPLQHP  244 (442)
T ss_pred             EEEEeeeecchhh----------hhcCHHHHHHHHHHHHHHHHHHHHHh-----------CCEEEEECChHHhCCCCCCC
Confidence            9999998643211          11234567899999999998877542           237999999865421     


Q ss_pred             -----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc----cchHHHHHHHHhc--CCCC
Q psy12833        156 -----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS----MLNEKVRNFLARS--IPAP  218 (254)
Q Consensus       156 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~----~~~~~~~~~~~~~--~~~~  218 (254)
                                 ..+...|+.+|.+.+.+++.+.+.   .++.+..+.|+.+..+...    .....+.......  +..+
T Consensus       245 ~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~  321 (442)
T PLN02206        245 QVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY  321 (442)
T ss_pred             CCccccccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEe
Confidence                       112457999999999988876554   4688888888777665421    1112222222211  1110


Q ss_pred             ------CCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        219 ------QRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       219 ------~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                            ..+++++|+|++++.++..+.  +..+++.+|.
T Consensus       322 g~G~~~rdfi~V~Dva~ai~~a~e~~~--~g~yNIgs~~  358 (442)
T PLN02206        322 GDGKQTRSFQFVSDLVEGLMRLMEGEH--VGPFNLGNPG  358 (442)
T ss_pred             CCCCEEEeEEeHHHHHHHHHHHHhcCC--CceEEEcCCC
Confidence                  236799999999999886542  3478887664

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.73  E-value=2.4e-16  Score=133.07  Aligned_cols=200  Identities=15%  Similarity=0.106  Sum_probs=136.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +++||||||.+|++++++|.++|++|++..|+.+......   ..++.++.+|++|++++.++++       ++|++||+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~---~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~   71 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK---EWGAELVYGDLSLPETLPPSFK-------GVTAIIDA   71 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh---hcCCEEEECCCCCHHHHHHHHC-------CCCEEEEC
Confidence            7999999999999999999999999999999865543322   2368899999999998887776       68999998


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhc
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS  165 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~s  165 (254)
                      ++...               .+.....++|+.+..++.+++...    .      -.++|++||..+.. . +...|..+
T Consensus        72 ~~~~~---------------~~~~~~~~~~~~~~~~l~~aa~~~----g------vkr~I~~Ss~~~~~-~-~~~~~~~~  124 (317)
T CHL00194         72 STSRP---------------SDLYNAKQIDWDGKLALIEAAKAA----K------IKRFIFFSILNAEQ-Y-PYIPLMKL  124 (317)
T ss_pred             CCCCC---------------CCccchhhhhHHHHHHHHHHHHHc----C------CCEEEEeccccccc-c-CCChHHHH
Confidence            75321               111234567788887777766542    2      35899999864332 1 22457778


Q ss_pred             hHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhc------CCCCCCCCCHHHHHHHHHHHhcCCC
Q psy12833        166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS------IPAPQRLGHPDEFAQLVQSIITNPL  239 (254)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~va~~~~~l~~~~~  239 (254)
                      |...+.+.+       ..++.+..++|+.+..++....   ....+...      -..+..+++++|+|+.+..++..+.
T Consensus       125 K~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  194 (317)
T CHL00194        125 KSDIEQKLK-------KSGIPYTIFRLAGFFQGLISQY---AIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE  194 (317)
T ss_pred             HHHHHHHHH-------HcCCCeEEEeecHHhhhhhhhh---hhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc
Confidence            887665543       3578899999986543321110   00011000      0011345688999999999997655


Q ss_pred             cccceEEecCCcc
Q psy12833        240 INGEVIRIDGALR  252 (254)
Q Consensus       240 ~~G~~i~~~gG~~  252 (254)
                      ..|+++++-|+..
T Consensus       195 ~~~~~~ni~g~~~  207 (317)
T CHL00194        195 TKNKTFPLVGPKS  207 (317)
T ss_pred             ccCcEEEecCCCc
Confidence            5789999988754

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.72  E-value=1.3e-15  Score=127.98  Aligned_cols=210  Identities=22%  Similarity=0.197  Sum_probs=148.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC-cEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL-DVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i-d~li~   84 (254)
                      .+|||||+|.||++++++|.++|++|+.++|.........    ..+.++.+|++|.+...++.+       .. |.+||
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~-------~~~d~vih   70 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----SGVEFVVLDLTDRDLVDELAK-------GVPDAVIH   70 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----cccceeeecccchHHHHHHHh-------cCCCEEEE
Confidence            3999999999999999999999999999999776654432    467889999999865555555       33 99999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--------  156 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--------  156 (254)
                      +|+........        . ......+.+|+.+..++++++..    ..      ..++++.||.....+.        
T Consensus        71 ~aa~~~~~~~~--------~-~~~~~~~~~nv~gt~~ll~aa~~----~~------~~~~v~~ss~~~~~~~~~~~~~~E  131 (314)
T COG0451          71 LAAQSSVPDSN--------A-SDPAEFLDVNVDGTLNLLEAARA----AG------VKRFVFASSVSVVYGDPPPLPIDE  131 (314)
T ss_pred             ccccCchhhhh--------h-hCHHHHHHHHHHHHHHHHHHHHH----cC------CCeEEEeCCCceECCCCCCCCccc
Confidence            99976432210        1 13456899999999999988877    22      4688886664533321        


Q ss_pred             ---CCCc--cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-----chHHHHHHHHhcCC-CC-------
Q psy12833        157 ---SGQV--AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-----LNEKVRNFLARSIP-AP-------  218 (254)
Q Consensus       157 ---~~~~--~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-----~~~~~~~~~~~~~~-~~-------  218 (254)
                         +..+  .|+.+|...+.+++..+.   ..++.+..+.|+.+..+....     .............+ ..       
T Consensus       132 ~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (314)
T COG0451         132 DLGPPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQ  208 (314)
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCce
Confidence               1122  499999999999998887   568999999998887665332     22222222333332 10       


Q ss_pred             -CCCCCHHHHHHHHHHHhcCCCcccceEEecCC
Q psy12833        219 -QRLGHPDEFAQLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       219 -~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                       ..+++++|++++++.++..+...  .+++.++
T Consensus       209 ~~~~i~v~D~a~~~~~~~~~~~~~--~~ni~~~  239 (314)
T COG0451         209 TRDFVYVDDVADALLLALENPDGG--VFNIGSG  239 (314)
T ss_pred             eEeeEeHHHHHHHHHHHHhCCCCc--EEEeCCC
Confidence             12678999999999999864322  7777665

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.72  E-value=1.1e-15  Score=128.60  Aligned_cols=213  Identities=14%  Similarity=0.028  Sum_probs=141.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          7 GLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +|||||+|.||++++++|.++|+ .|++++|..... .. .++.  ...+..|+++.+.++.+.+.   .+.++|++||+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~   73 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA--DLVIADYIDKEDFLDRLEKG---AFGKIEAIFHQ   73 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh--heeeeccCcchhHHHHHHhh---ccCCCCEEEEC
Confidence            58999999999999999999998 688887754322 11 1111  13567788887766665543   34589999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC----------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG----------  155 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~----------  155 (254)
                      |+...            ...++.+..+++|+.++.++++++...           ..++|++||...+..          
T Consensus        74 A~~~~------------~~~~~~~~~~~~n~~~~~~ll~~~~~~-----------~~~~v~~SS~~vy~~~~~~~~e~~~  130 (314)
T TIGR02197        74 GACSD------------TTETDGEYMMENNYQYSKRLLDWCAEK-----------GIPFIYASSAATYGDGEAGFREGRE  130 (314)
T ss_pred             ccccC------------ccccchHHHHHHHHHHHHHHHHHHHHh-----------CCcEEEEccHHhcCCCCCCcccccC
Confidence            98632            122345667899999999998876542           236999999765431          


Q ss_pred             -CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------cchHHHHHHHHhcC--CC---------
Q psy12833        156 -QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------MLNEKVRNFLARSI--PA---------  217 (254)
Q Consensus       156 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~~~~~~~~~--~~---------  217 (254)
                       ..+...|+.+|.+.+.+++....+. ..++.+..+.|+.+..+...      ..............  +.         
T Consensus       131 ~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (314)
T TIGR02197       131 LERPLNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKD  209 (314)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCC
Confidence             1245689999999999887643322 23567788888777665421      11112222221111  00         


Q ss_pred             ---CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 ---PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 ---~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                         ...+++++|+++++..++..  ..+.++++.+|..
T Consensus       210 g~~~~~~i~v~D~a~~i~~~~~~--~~~~~yni~~~~~  245 (314)
T TIGR02197       210 GEQLRDFVYVKDVVDVNLWLLEN--GVSGIFNLGTGRA  245 (314)
T ss_pred             CCceeeeEEHHHHHHHHHHHHhc--ccCceEEcCCCCC
Confidence               02467999999999999976  2466888877654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.71  E-value=1.6e-15  Score=127.02  Aligned_cols=146  Identities=14%  Similarity=0.095  Sum_probs=107.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|.||++++++|.++| +|+.++|...              .+..|++|.+++.++++..     ++|+|||+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~   61 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------DYCGDFSNPEGVAETVRKI-----RPDVIVNA   61 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------cccCCCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            69999999999999999999999 7888887531              2467999999998888854     68999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC----------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG----------  155 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~----------  155 (254)
                      |+.....          ...++.+..+.+|+.++.++++++...           ..++|++||...+.+          
T Consensus        62 Aa~~~~~----------~~~~~~~~~~~~N~~~~~~l~~aa~~~-----------g~~~v~~Ss~~Vy~~~~~~p~~E~~  120 (299)
T PRK09987         62 AAHTAVD----------KAESEPEFAQLLNATSVEAIAKAANEV-----------GAWVVHYSTDYVFPGTGDIPWQETD  120 (299)
T ss_pred             CccCCcc----------hhhcCHHHHHHHHHHHHHHHHHHHHHc-----------CCeEEEEccceEECCCCCCCcCCCC
Confidence            9865321          112234566789999999998877652           236899998654321          


Q ss_pred             -CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccc
Q psy12833        156 -QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL  199 (254)
Q Consensus       156 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~  199 (254)
                       ..+...|+.+|.+.+.+++.+..       ....++|+++..+.
T Consensus       121 ~~~P~~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        121 ATAPLNVYGETKLAGEKALQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence             12445799999999988865432       23667777776653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.69  E-value=1.9e-15  Score=126.77  Aligned_cols=200  Identities=15%  Similarity=0.088  Sum_probs=136.8

Q ss_pred             EEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCCc
Q psy12833          8 LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAG   87 (254)
Q Consensus         8 lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag   87 (254)
                      |||||+|.||+++++.|.++|++|+++.+.                 ..+|++|.++++++++..     ++|+|||+|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A~   58 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------KELDLTRQADVEAFFAKE-----KPTYVILAAA   58 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------ccCCCCCHHHHHHHHhcc-----CCCEEEEeee
Confidence            699999999999999999999988765432                 258999999988887763     6899999998


Q ss_pred             cCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-----------
Q psy12833         88 ISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-----------  156 (254)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-----------  156 (254)
                      ......         ...++....++.|+.++..+++++...    .      -+++|++||...+.+.           
T Consensus        59 ~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~----~------~~~~i~~SS~~vyg~~~~~~~~E~~~~  119 (306)
T PLN02725         59 KVGGIH---------ANMTYPADFIRENLQIQTNVIDAAYRH----G------VKKLLFLGSSCIYPKFAPQPIPETALL  119 (306)
T ss_pred             eecccc---------hhhhCcHHHHHHHhHHHHHHHHHHHHc----C------CCeEEEeCceeecCCCCCCCCCHHHhc
Confidence            642111         011233456788999988888777642    2      3579999997544311           


Q ss_pred             --C--C-CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------cchHHHHHHH----HhcCC-----
Q psy12833        157 --S--G-QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------MLNEKVRNFL----ARSIP-----  216 (254)
Q Consensus       157 --~--~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~~~~~----~~~~~-----  216 (254)
                        +  + ...|+.+|.+.+.+.+.+.+++   ++++..+.|+.+..+...      ...+.....+    ....+     
T Consensus       120 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (306)
T PLN02725        120 TGPPEPTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVW  196 (306)
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEc
Confidence              1  1 2249999999998888776553   789999999888776421      1112222111    11111     


Q ss_pred             ----CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        217 ----APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       217 ----~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                          ....+++++|++++++.++.... .++.+++.+|..
T Consensus       197 ~~g~~~~~~i~v~Dv~~~~~~~~~~~~-~~~~~ni~~~~~  235 (306)
T PLN02725        197 GSGSPLREFLHVDDLADAVVFLMRRYS-GAEHVNVGSGDE  235 (306)
T ss_pred             CCCCeeeccccHHHHHHHHHHHHhccc-cCcceEeCCCCc
Confidence                01357899999999999997532 345568877654

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.69  E-value=6.5e-15  Score=128.96  Aligned_cols=210  Identities=15%  Similarity=0.173  Sum_probs=140.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .+++|||||+|.||++++++|.++|++|++++|......+.....  ..++.++..|+.+..     +       .++|+
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-------~~~D~  187 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-------LEVDQ  187 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-------cCCCE
Confidence            468999999999999999999999999999988643222111111  235778888886542     1       26899


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-------  154 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-------  154 (254)
                      |||+|+......          ...+....++.|+.++.++++++...           ..++|++||...+.       
T Consensus       188 ViHlAa~~~~~~----------~~~~p~~~~~~Nv~gT~nLleaa~~~-----------g~r~V~~SS~~VYg~~~~~p~  246 (436)
T PLN02166        188 IYHLACPASPVH----------YKYNPVKTIKTNVMGTLNMLGLAKRV-----------GARFLLTSTSEVYGDPLEHPQ  246 (436)
T ss_pred             EEECceeccchh----------hccCHHHHHHHHHHHHHHHHHHHHHh-----------CCEEEEECcHHHhCCCCCCCC
Confidence            999998643221          11223577899999999998777643           23799999876442       


Q ss_pred             ---------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc----cchHHHHHHHHhcCCC----
Q psy12833        155 ---------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS----MLNEKVRNFLARSIPA----  217 (254)
Q Consensus       155 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~----~~~~~~~~~~~~~~~~----  217 (254)
                               |..+...|+.+|.+.+.+++.+.+.   .++.+..+.|+.+..+...    .....+........+.    
T Consensus       247 ~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g  323 (436)
T PLN02166        247 KETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYG  323 (436)
T ss_pred             CccccccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeC
Confidence                     1122457999999999999887654   4788888888877766421    1112222222221111    


Q ss_pred             ----CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        218 ----PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       218 ----~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                          ...+++++|+++++..++..+  .+.++++-+|.
T Consensus       324 ~g~~~rdfi~V~Dva~ai~~~~~~~--~~giyNIgs~~  359 (436)
T PLN02166        324 DGKQTRSFQYVSDLVDGLVALMEGE--HVGPFNLGNPG  359 (436)
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhcC--CCceEEeCCCC
Confidence                134689999999999988643  23478886554

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.2e-14  Score=134.24  Aligned_cols=214  Identities=19%  Similarity=0.140  Sum_probs=141.9

Q ss_pred             EEEEeCCCChHHHHHHHHHH--HcCCEEEEeeCCCch--hHHHHHHhC-CCceEEecCCCCHHHH--HHHHHHHHHHcCC
Q psy12833          6 VGLVTGGASGLGKATVERIV--REGGRVVLCDLPTSE--GESVAKELG-PDVKFAPVDVTSEEDV--QKAVLLCKDSFGK   78 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~--~~g~~v~~~~r~~~~--~~~~~~~~~-~~~~~~~~Dls~~~~~--~~~~~~~~~~~~~   78 (254)
                      ++|||||||.||++++++|.  ++|++|++++|+...  ++......+ .++.++.+|++|++..  ...++.+    .+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GD   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cC
Confidence            79999999999999999999  589999999996532  222222222 5688999999985310  1122222    37


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--  156 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--  156 (254)
                      +|++||||+.....          .+   .....++|+.+..++++++..    ..      .++++++||.......  
T Consensus        78 ~D~Vih~Aa~~~~~----------~~---~~~~~~~nv~gt~~ll~~a~~----~~------~~~~v~~SS~~v~g~~~~  134 (657)
T PRK07201         78 IDHVVHLAAIYDLT----------AD---EEAQRAANVDGTRNVVELAER----LQ------AATFHHVSSIAVAGDYEG  134 (657)
T ss_pred             CCEEEECceeecCC----------CC---HHHHHHHHhHHHHHHHHHHHh----cC------CCeEEEEeccccccCccC
Confidence            99999999964211          12   245668899998888776543    22      3689999997654321  


Q ss_pred             -----------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----ch--HHHHHHHH--hcC--
Q psy12833        157 -----------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----LN--EKVRNFLA--RSI--  215 (254)
Q Consensus       157 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----~~--~~~~~~~~--~~~--  215 (254)
                                 .....|+.+|...+.+.+.      ..++++..++|+.+..+....    ..  ......+.  ...  
T Consensus       135 ~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  208 (657)
T PRK07201        135 VFREDDFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPS  208 (657)
T ss_pred             ccccccchhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCc
Confidence                       1235699999999888753      247999999999986643211    00  00111111  111  


Q ss_pred             --CCC------CCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        216 --PAP------QRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       216 --~~~------~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                        +..      ..+++++|+++++..++..+...|+.+++.++..
T Consensus       209 ~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~  253 (657)
T PRK07201        209 WLPMVGPDGGRTNIVPVDYVADALDHLMHKDGRDGQTFHLTDPKP  253 (657)
T ss_pred             ccccccCCCCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCC
Confidence              110      1356799999999999876667899999977643

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.63  E-value=2.7e-14  Score=115.05  Aligned_cols=214  Identities=20%  Similarity=0.155  Sum_probs=147.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||.|=||++.+.+|++.|++|++.+.-.....+.....  .+.|++.|+.|.+.+++++++.     ++|.|||-
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--~~~f~~gDi~D~~~L~~vf~~~-----~idaViHF   74 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--QFKFYEGDLLDRALLTAVFEEN-----KIDAVVHF   74 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--cCceEEeccccHHHHHHHHHhc-----CCCEEEEC
Confidence            7999999999999999999999999999988555444333221  1689999999999888888876     89999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-----------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-----------  154 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-----------  154 (254)
                      ||....+          .+.+...+-++-|+.+++.|+++....-          -.+|||-||.+.+.           
T Consensus        75 Aa~~~Vg----------ESv~~Pl~Yy~NNv~gTl~Ll~am~~~g----------v~~~vFSStAavYG~p~~~PI~E~~  134 (329)
T COG1087          75 AASISVG----------ESVQNPLKYYDNNVVGTLNLIEAMLQTG----------VKKFIFSSTAAVYGEPTTSPISETS  134 (329)
T ss_pred             ccccccc----------hhhhCHHHHHhhchHhHHHHHHHHHHhC----------CCEEEEecchhhcCCCCCcccCCCC
Confidence            9975433          4777888899999999999977766543          35688877766553           


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEE--------ecCCcccccc---ccchHHHHHHHHhcCC-------
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTI--------APGLFDTPLL---SMLNEKVRNFLARSIP-------  216 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v--------~Pg~~~t~~~---~~~~~~~~~~~~~~~~-------  216 (254)
                      +..+...|+.||...+.+.+.+++.+.   .++.++        +|...-.+..   ..+.+-..+-..++.+       
T Consensus       135 ~~~p~NPYG~sKlm~E~iL~d~~~a~~---~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~  211 (329)
T COG1087         135 PLAPINPYGRSKLMSEEILRDAAKANP---FKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGD  211 (329)
T ss_pred             CCCCCCcchhHHHHHHHHHHHHHHhCC---CcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCC
Confidence            223566899999999999999888764   444333        2321111111   1222333333333222       


Q ss_pred             ---CC-----CCCCCHHHHHHHHHHHhcC-CCccc--ceEEecCC
Q psy12833        217 ---AP-----QRLGHPDEFAQLVQSIITN-PLING--EVIRIDGA  250 (254)
Q Consensus       217 ---~~-----~~~~~~~~va~~~~~l~~~-~~~~G--~~i~~~gG  250 (254)
                         .+     +..+.+.|+|.+-+..+.- .. .|  +++++--|
T Consensus       212 DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~-~g~~~~~NLG~G  255 (329)
T COG1087         212 DYDTKDGTCIRDYIHVDDLADAHVLALKYLKE-GGSNNIFNLGSG  255 (329)
T ss_pred             CCCCCCCCeeeeeeehhHHHHHHHHHHHHHHh-CCceeEEEccCC
Confidence               11     3567899999987777741 11 33  35666433

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.62  E-value=1.5e-14  Score=112.33  Aligned_cols=173  Identities=17%  Similarity=0.230  Sum_probs=124.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a   86 (254)
                      |+|+||||.+|+.++++|.++|++|+++.|+.++.++     ..+++++++|+.|++++.+.++       +.|++|+++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~   68 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAA   68 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----ccccccceeeehhhhhhhhhhh-------hcchhhhhh
Confidence            6899999999999999999999999999999887666     5789999999999988888887       789999999


Q ss_pred             ccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC-------
Q psy12833         87 GISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-------  159 (254)
Q Consensus        87 g~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~-------  159 (254)
                      |...             .  +            ...++.+...+.+.+      .++++++||.......+..       
T Consensus        69 ~~~~-------------~--~------------~~~~~~~~~a~~~~~------~~~~v~~s~~~~~~~~~~~~~~~~~~  115 (183)
T PF13460_consen   69 GPPP-------------K--D------------VDAAKNIIEAAKKAG------VKRVVYLSSAGVYRDPPGLFSDEDKP  115 (183)
T ss_dssp             HSTT-------------T--H------------HHHHHHHHHHHHHTT------SSEEEEEEETTGTTTCTSEEEGGTCG
T ss_pred             hhhc-------------c--c------------ccccccccccccccc------cccceeeeccccCCCCCccccccccc
Confidence            7431             1  1            334555566665554      5689999998877654442       


Q ss_pred             --ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        160 --VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       160 --~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                        ..|...|...+.+.       ...+++...++|+++..+......  ...   ...+.....++.+|+|+.++.++.
T Consensus       116 ~~~~~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~--~~~---~~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  116 IFPEYARDKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYR--LIK---EGGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             GGHHHHHHHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEE--EES---STSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHHHHH-------HhcCCCEEEEECcEeEeCCCccee--EEe---ccCCCCcCcCCHHHHHHHHHHHhC
Confidence              13444444333222       345899999999999776532110  000   011111456799999999998874

...

>PRK05865 hypothetical protein; Provisional

Probab=99.62  E-value=5.4e-14  Score=130.41  Aligned_cols=182  Identities=20%  Similarity=0.242  Sum_probs=129.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +++||||+|+||++++++|.++|++|++++|+....      ...++.++.+|++|.+++.++++       ++|++|||
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~~~v~~v~gDL~D~~~l~~al~-------~vD~VVHl   68 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WPSSADFIAADIRDATAVESAMT-------GADVVAHC   68 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cccCceEEEeeCCCHHHHHHHHh-------CCCEEEEC
Confidence            699999999999999999999999999999975321      12357889999999999888876       58999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhc
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS  165 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~s  165 (254)
                      |+...             .      .+++|+.++.++++++.    +..      .+++|++||..              
T Consensus        69 Aa~~~-------------~------~~~vNv~GT~nLLeAa~----~~g------vkr~V~iSS~~--------------  105 (854)
T PRK05865         69 AWVRG-------------R------NDHINIDGTANVLKAMA----ETG------TGRIVFTSSGH--------------  105 (854)
T ss_pred             CCccc-------------c------hHHHHHHHHHHHHHHHH----HcC------CCeEEEECCcH--------------
Confidence            97421             1      35788888887765543    333      46899999863              


Q ss_pred             hHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHHhcCCCc
Q psy12833        166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA-----PQRLGHPDEFAQLVQSIITNPLI  240 (254)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~va~~~~~l~~~~~~  240 (254)
                      |.+.+.+.+       .+++.+..+.|+.+..+...........  ....+.     ...+++++|+|.++..++..+..
T Consensus       106 K~aaE~ll~-------~~gl~~vILRp~~VYGP~~~~~i~~ll~--~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~  176 (854)
T PRK05865        106 QPRVEQMLA-------DCGLEWVAVRCALIFGRNVDNWVQRLFA--LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI  176 (854)
T ss_pred             HHHHHHHHH-------HcCCCEEEEEeceEeCCChHHHHHHHhc--CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc
Confidence            777766553       2489999999999887642111111100  001111     01368999999999998864434


Q ss_pred             ccceEEecCCcc
Q psy12833        241 NGEVIRIDGALR  252 (254)
Q Consensus       241 ~G~~i~~~gG~~  252 (254)
                      .|..+++-+|..
T Consensus       177 ~ggvyNIgsg~~  188 (854)
T PRK05865        177 DSGPVNLAAPGE  188 (854)
T ss_pred             CCCeEEEECCCc
Confidence            567788876653

>PLN02996 fatty acyl-CoA reductase

Probab=99.62  E-value=1.6e-14  Score=128.34  Aligned_cols=215  Identities=16%  Similarity=0.171  Sum_probs=142.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC---CEEEEeeCCCch---hHHHHHH-------------h--------CCCceE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG---GRVVLCDLPTSE---GESVAKE-------------L--------GPDVKF   54 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g---~~v~~~~r~~~~---~~~~~~~-------------~--------~~~~~~   54 (254)
                      .+||+++||||||.||+.+++.|++.+   .+|++..|....   .+++..+             .        ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            579999999999999999999998764   367888886532   1111111             1        157899


Q ss_pred             EecCCC-------CHHHHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHH
Q psy12833         55 APVDVT-------SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA  127 (254)
Q Consensus        55 ~~~Dls-------~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  127 (254)
                      +..|++       +.+.++++++       ++|+|||+|+....             .++.+..+.+|+.++.++++++.
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-------------~~~~~~~~~~Nv~gt~~ll~~a~  148 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-------------DERYDVALGINTLGALNVLNFAK  148 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-------------cCCHHHHHHHHHHHHHHHHHHHH
Confidence            999998       4444445544       68999999986531             12356788999999999988776


Q ss_pred             HHHHhccCCCCCCCcEEEEEeccccccCCC--------------------------------------------------
Q psy12833        128 QLIHENKLNEDGLRGVIINTASIAAYEGQS--------------------------------------------------  157 (254)
Q Consensus       128 ~~~~~~~~~~~~~~~~ii~vss~~~~~~~~--------------------------------------------------  157 (254)
                      ..-   .      -.+++++||........                                                  
T Consensus       149 ~~~---~------~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (491)
T PLN02996        149 KCV---K------VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAM  219 (491)
T ss_pred             hcC---C------CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHh
Confidence            521   1      24789999876542210                                                  


Q ss_pred             ------------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---------HHHHHHHHhc-C
Q psy12833        158 ------------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---------EKVRNFLARS-I  215 (254)
Q Consensus       158 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---------~~~~~~~~~~-~  215 (254)
                                  .-..|+.||+..+.+++..+     .++.+..++|..+..+......         .......... .
T Consensus       220 ~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~  294 (491)
T PLN02996        220 KDLGMERAKLHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKL  294 (491)
T ss_pred             hhhchhHHHhCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceE
Confidence                        11359999999998886542     3799999999888776443211         1111111111 1


Q ss_pred             C-------CCCCCCCHHHHHHHHHHHhcC---CCcccceEEecCC
Q psy12833        216 P-------APQRLGHPDEFAQLVQSIITN---PLINGEVIRIDGA  250 (254)
Q Consensus       216 ~-------~~~~~~~~~~va~~~~~l~~~---~~~~G~~i~~~gG  250 (254)
                      +       .....+++++++++++.++..   ..-.++++++..|
T Consensus       295 ~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        295 TCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             eEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            1       014567999999999888853   2124678998766

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.59  E-value=1.5e-14  Score=120.20  Aligned_cols=195  Identities=18%  Similarity=0.161  Sum_probs=129.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++||||++|-||.++.++|.++|++|+.+.|+                  .+|++|.+++.+++++.     ++|+||||
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------~~dl~d~~~~~~~~~~~-----~pd~Vin~   58 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS------------------DLDLTDPEAVAKLLEAF-----KPDVVINC   58 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------CS-TTSHHHHHHHHHHH-------SEEEE-
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------hcCCCCHHHHHHHHHHh-----CCCeEecc
Confidence            79999999999999999999999999998775                  68999999999999887     79999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC---------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ---------  156 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~---------  156 (254)
                      |+.....          .-.++.+..+.+|+.++..+++.....           ..++|++||...+.+.         
T Consensus        59 aa~~~~~----------~ce~~p~~a~~iN~~~~~~la~~~~~~-----------~~~li~~STd~VFdG~~~~~y~E~d  117 (286)
T PF04321_consen   59 AAYTNVD----------ACEKNPEEAYAINVDATKNLAEACKER-----------GARLIHISTDYVFDGDKGGPYTEDD  117 (286)
T ss_dssp             -----HH----------HHHHSHHHHHHHHTHHHHHHHHHHHHC-----------T-EEEEEEEGGGS-SSTSSSB-TTS
T ss_pred             ceeecHH----------hhhhChhhhHHHhhHHHHHHHHHHHHc-----------CCcEEEeeccEEEcCCcccccccCC
Confidence            9875322          123456678999999999988877652           4689999998766432         


Q ss_pred             --CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCC------CCCCCCCHHHHH
Q psy12833        157 --SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP------APQRLGHPDEFA  228 (254)
Q Consensus       157 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va  228 (254)
                        .+...|+.+|...+..++..    .+   ....++++++-.+-.......+.+...+..+      ......+++|+|
T Consensus       118 ~~~P~~~YG~~K~~~E~~v~~~----~~---~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA  190 (286)
T PF04321_consen  118 PPNPLNVYGRSKLEGEQAVRAA----CP---NALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLA  190 (286)
T ss_dssp             ----SSHHHHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHh----cC---CEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHH
Confidence              24579999999888887762    11   6677788887766333333444444432211      113456889999


Q ss_pred             HHHHHHhcCC---CcccceEEecCCc
Q psy12833        229 QLVQSIITNP---LINGEVIRIDGAL  251 (254)
Q Consensus       229 ~~~~~l~~~~---~~~G~~i~~~gG~  251 (254)
                      +.+..++...   .-.+.++.+.|..
T Consensus       191 ~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  191 RVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             HHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             HHHHHHHHhcccccccceeEEEecCc
Confidence            9999999632   1235566665543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1430|consensus

Probab=99.57  E-value=9.4e-14  Score=116.58  Aligned_cols=221  Identities=20%  Similarity=0.163  Sum_probs=155.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |.+..+++||||+|.+|++++++|.+++  .++.+.+.....-.-..++   ...++.++++|+.|..++.+.+.     
T Consensus         1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    1 MEKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-----   75 (361)
T ss_pred             CCcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-----
Confidence            6788999999999999999999999998  7899998876522211222   35678999999999998888877     


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                        +. .++|||+...+.          ....+.+..+++|+.++.+++......-          -.++|++||.....+
T Consensus        76 --~~-~Vvh~aa~~~~~----------~~~~~~~~~~~vNV~gT~nvi~~c~~~~----------v~~lIYtSs~~Vvf~  132 (361)
T KOG1430|consen   76 --GA-VVVHCAASPVPD----------FVENDRDLAMRVNVNGTLNVIEACKELG----------VKRLIYTSSAYVVFG  132 (361)
T ss_pred             --Cc-eEEEeccccCcc----------ccccchhhheeecchhHHHHHHHHHHhC----------CCEEEEecCceEEeC
Confidence              66 778887754322          2333577889999999877766655543          458999999876543


Q ss_pred             ------------CCC--CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCC----
Q psy12833        156 ------------QSG--QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA----  217 (254)
Q Consensus       156 ------------~~~--~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~----  217 (254)
                                  .|.  ...|+.||+-.+.+++..+.   .......+++|..+..|......+...+.+......    
T Consensus       133 g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g  209 (361)
T KOG1430|consen  133 GEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIG  209 (361)
T ss_pred             CeecccCCCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEee
Confidence                        222  24899999988888876543   456889999999998887766666655544332110    


Q ss_pred             ----CCCCCCHHHHHHHH----HHHh-cCCCcccceEEecCCcc
Q psy12833        218 ----PQRLGHPDEFAQLV----QSII-TNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 ----~~~~~~~~~va~~~----~~l~-~~~~~~G~~i~~~gG~~  252 (254)
                          ...+.+.+-++.+.    ..|. .++..+||.+.+..|..
T Consensus       210 ~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p  253 (361)
T KOG1430|consen  210 DGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTP  253 (361)
T ss_pred             ccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCc
Confidence                02334555455433    2333 46889999999977653

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.57  E-value=4.1e-13  Score=109.99  Aligned_cols=240  Identities=15%  Similarity=0.137  Sum_probs=173.2

Q ss_pred             CcEEEEeCC-CChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCC----
Q psy12833          4 GVVGLVTGG-ASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK----   78 (254)
Q Consensus         4 ~~~~lItGa-s~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~----   78 (254)
                      ..+|+|.|. +..|++.+|..|-++|+-|+++..+.++.+.+.++-...+.....|..++.++...+++..+.+..    
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p   82 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVP   82 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCC
Confidence            357899996 789999999999999999999999988888777766666888899998888888888888776543    


Q ss_pred             ----------CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEe
Q psy12833         79 ----------LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA  148 (254)
Q Consensus        79 ----------id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vs  148 (254)
                                +..+|......     +...+.+.++.+.|.+.++.|+..++.+++.++|++..+..   .....|++.-
T Consensus        83 ~~~~~~h~l~L~svi~~Psl~-----yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~---~~~~iil~~P  154 (299)
T PF08643_consen   83 FPGAPPHHLQLKSVIFIPSLS-----YPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSN---QKSKIILFNP  154 (299)
T ss_pred             CCCCCCceeEEEEEEEecCCC-----CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCceEEEEeC
Confidence                      23333332221     12334455899999999999999999999999999998320   0034455555


Q ss_pred             ccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----------------ch--------
Q psy12833        149 SIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----------------LN--------  204 (254)
Q Consensus       149 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----------------~~--------  204 (254)
                      |+.+....|..+.-.....++.+|+.+|++|+.+.+|.|..+..|.++-..+..                ..        
T Consensus       155 si~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~~~~~s~~~~~~~~~se~~~W~~~~r~lY~  234 (299)
T PF08643_consen  155 SISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGNFGQPSNYKYLSLAGSEVLAWTSIMRALYG  234 (299)
T ss_pred             chhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccccCCCcccccccccCCCCcccCchhHHhhhc
Confidence            777888888888999999999999999999999999999999988886652110                00        


Q ss_pred             HHHHHHHHhcCCCC---CCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        205 EKVRNFLARSIPAP---QRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       205 ~~~~~~~~~~~~~~---~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      +.......+..+..   .+..+..+.-..+..++... .+|.++.+--|-.
T Consensus       235 ~~y~~~~~~~~~~~~~~~~Gs~lr~L~~~vfd~~~~~-~~~~v~y~G~Gs~  284 (299)
T PF08643_consen  235 PNYSSIQSSAIPAGSGRGKGSSLRELHNAVFDALYGS-SKGSVVYVGRGSR  284 (299)
T ss_pred             hhHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhcCC-CCCCEEEEcCcee
Confidence            01111111111110   13445677777777777653 3777777765543

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.56  E-value=6.1e-13  Score=108.03  Aligned_cols=180  Identities=15%  Similarity=0.159  Sum_probs=132.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a   86 (254)
                      +||||++|-+|.+|++.|. .+++|+.++|..                  +|++|++.+.+++.+.     ++|+|||+|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------~Ditd~~~v~~~i~~~-----~PDvVIn~A   58 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE------------------LDITDPDAVLEVIRET-----RPDVVINAA   58 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------ccccChHHHHHHHHhh-----CCCEEEECc
Confidence            9999999999999999998 678999888853                  8999999999999988     899999999


Q ss_pred             ccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC----------
Q psy12833         87 GISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ----------  156 (254)
Q Consensus        87 g~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~----------  156 (254)
                      +.....          .-..+.+..+.+|..++.+++++....           ...+|++|+-..+.+.          
T Consensus        59 Ayt~vD----------~aE~~~e~A~~vNa~~~~~lA~aa~~~-----------ga~lVhiSTDyVFDG~~~~~Y~E~D~  117 (281)
T COG1091          59 AYTAVD----------KAESEPELAFAVNATGAENLARAAAEV-----------GARLVHISTDYVFDGEKGGPYKETDT  117 (281)
T ss_pred             cccccc----------cccCCHHHHHHhHHHHHHHHHHHHHHh-----------CCeEEEeecceEecCCCCCCCCCCCC
Confidence            975433          233446788999999999999988764           4689999987665432          


Q ss_pred             -CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCC------CCCCCCCHHHHHH
Q psy12833        157 -SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP------APQRLGHPDEFAQ  229 (254)
Q Consensus       157 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va~  229 (254)
                       .+...|+.||.+.+..++...       -+...++..|+......++...+.+...+..+      ..+...+.+++|.
T Consensus       118 ~~P~nvYG~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~  190 (281)
T COG1091         118 PNPLNVYGRSKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLAD  190 (281)
T ss_pred             CCChhhhhHHHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHH
Confidence             256799999999988887653       23344455555444333333333333322211      1145678999999


Q ss_pred             HHHHHhcCC
Q psy12833        230 LVQSIITNP  238 (254)
Q Consensus       230 ~~~~l~~~~  238 (254)
                      .+..++...
T Consensus       191 ~i~~ll~~~  199 (281)
T COG1091         191 AILELLEKE  199 (281)
T ss_pred             HHHHHHhcc
Confidence            999999643

>PLN02778 3,5-epimerase/4-reductase

Probab=99.55  E-value=1.8e-12  Score=108.43  Aligned_cols=193  Identities=14%  Similarity=0.119  Sum_probs=118.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      .+++|||||+|.||+++++.|.++|++|+...                     .|+.|.+.+...++..     ++|+||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------~~~~~~~~v~~~l~~~-----~~D~Vi   62 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------GRLENRASLEADIDAV-----KPTHVF   62 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------CccCCHHHHHHHHHhc-----CCCEEE
Confidence            36899999999999999999999999986432                     3455666665555532     689999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc----------
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY----------  153 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~----------  153 (254)
                      |+|+....... +      ...++....+++|+.++.++++++...    .      -. .+++||.+.+          
T Consensus        63 H~Aa~~~~~~~-~------~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g------v~-~v~~sS~~vy~~~~~~p~~~  124 (298)
T PLN02778         63 NAAGVTGRPNV-D------WCESHKVETIRANVVGTLTLADVCRER----G------LV-LTNYATGCIFEYDDAHPLGS  124 (298)
T ss_pred             ECCcccCCCCc-h------hhhhCHHHHHHHHHHHHHHHHHHHHHh----C------CC-EEEEecceEeCCCCCCCccc
Confidence            99997542210 0      122345678999999999998887653    1      12 3444443211          


Q ss_pred             ----c----CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhc---CCCCCCCC
Q psy12833        154 ----E----GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS---IPAPQRLG  222 (254)
Q Consensus       154 ----~----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~---~~~~~~~~  222 (254)
                          .    +.++...|+.+|.+.+.+++.++..   .++|+     ++...+-.. ....+.......   ...+....
T Consensus       125 ~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~~-~~~~fi~~~~~~~~~~~~~~s~~  195 (298)
T PLN02778        125 GIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDLS-NPRNFITKITRYEKVVNIPNSMT  195 (298)
T ss_pred             CCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCcccc-cHHHHHHHHHcCCCeeEcCCCCE
Confidence                0    1112357999999999998876532   23444     221111000 001111222221   11213477


Q ss_pred             CHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        223 HPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       223 ~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      +.+|++++++.++... .+| .+++.+|.
T Consensus       196 yv~D~v~al~~~l~~~-~~g-~yNigs~~  222 (298)
T PLN02778        196 ILDELLPISIEMAKRN-LTG-IYNFTNPG  222 (298)
T ss_pred             EHHHHHHHHHHHHhCC-CCC-eEEeCCCC
Confidence            9999999999998643 234 88885554

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.54  E-value=1.2e-13  Score=110.18  Aligned_cols=211  Identities=17%  Similarity=0.139  Sum_probs=153.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHH-------HHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESV-------AKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +|++||||-||-=|.-+++.|.++|+.|+.+.|+.+.-..-       --+.+.+++.+.+||+|..++.++++.+    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            58999999999999999999999999999888864322111       1111455889999999999999999998    


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc--
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE--  154 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~--  154 (254)
                       .+|-+.|.++.+...          .+.+..+...+++..|+.+++.+..-.-.+        .-++..-||..-+.  
T Consensus        78 -~PdEIYNLaAQS~V~----------vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~--------~~rfYQAStSE~fG~v  138 (345)
T COG1089          78 -QPDEIYNLAAQSHVG----------VSFEQPEYTADVDAIGTLRLLEAIRILGEK--------KTRFYQASTSELYGLV  138 (345)
T ss_pred             -Cchhheecccccccc----------ccccCcceeeeechhHHHHHHHHHHHhCCc--------ccEEEecccHHhhcCc
Confidence             789888888865443          455666677888899999998876654422        35788887765442  


Q ss_pred             ---------CCCCCccchhchHHHHHhHHHHHHHhcc---CCcEEEEEecCCccccccccchHHHHHHHHh--------c
Q psy12833        155 ---------GQSGQVAYSASKSGIVGMTLPMARDLAG---AGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR--------S  214 (254)
Q Consensus       155 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~--------~  214 (254)
                               |+.+.+.|+++|....-.+..++..|.-   .||-+|.=+|.-=.|-.++++.........+        .
T Consensus       139 ~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGN  218 (345)
T COG1089         139 QEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGN  218 (345)
T ss_pred             ccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecc
Confidence                     4557889999999888888888887743   4777777677655555555543332221111        1


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        215 IPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       215 ~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +..-+.++.+.|.+++++.+++.
T Consensus       219 ldAkRDWG~A~DYVe~mwlmLQq  241 (345)
T COG1089         219 LDAKRDWGHAKDYVEAMWLMLQQ  241 (345)
T ss_pred             ccccccccchHHHHHHHHHHHcc
Confidence            12226788999999999999964

>KOG1371|consensus

Probab=99.52  E-value=4.7e-13  Score=108.94  Aligned_cols=153  Identities=23%  Similarity=0.281  Sum_probs=119.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC----CCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDL----PTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r----~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++||||||.|-||.+.+.+|.++|+.|++++-    ..+.++...+...  ..+.+++.|+.|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            579999999999999999999999999998765    2334444444444  78999999999999999999987     


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc---
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE---  154 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~---  154 (254)
                      ++|.|+|-|+.....          .+.+...+-+..|+.+.++++.....    .+      ...+++.||...+.   
T Consensus        77 ~fd~V~Hfa~~~~vg----------eS~~~p~~Y~~nNi~gtlnlLe~~~~----~~------~~~~V~sssatvYG~p~  136 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG----------ESMENPLSYYHNNIAGTLNLLEVMKA----HN------VKALVFSSSATVYGLPT  136 (343)
T ss_pred             CCceEEeehhhhccc----------hhhhCchhheehhhhhHHHHHHHHHH----cC------CceEEEecceeeecCcc
Confidence            799999999865433          24445577788899999988665544    33      46788888876553   


Q ss_pred             --------CCC-CCccchhchHHHHHhHHHHHHHhc
Q psy12833        155 --------GQS-GQVAYSASKSGIVGMTLPMARDLA  181 (254)
Q Consensus       155 --------~~~-~~~~Y~~sK~a~~~~~~~la~e~~  181 (254)
                              +.. +...|+.+|.+++...+.+..-+.
T Consensus       137 ~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  137 KVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             eeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence                    122 567899999999999998877665

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.49  E-value=1.3e-12  Score=108.56  Aligned_cols=192  Identities=11%  Similarity=0.094  Sum_probs=121.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCC-CcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK-LDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~-id~li~   84 (254)
                      +++||||||.+|++++++|.++|++|.+..|+.+...      ..++..+.+|+.|++++.++++... ...+ +|.+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~------~~~~~~~~~d~~d~~~l~~a~~~~~-~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA------GPNEKHVKFDWLDEDTWDNPFSSDD-GMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc------CCCCccccccCCCHHHHHHHHhccc-CcCCceeEEEE
Confidence            3899999999999999999999999999999876542      1356678899999999999886542 2234 899999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchh
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA  164 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~  164 (254)
                      +++...               +...            ..+.++....+..      -++||++||.....+.       .
T Consensus        74 ~~~~~~---------------~~~~------------~~~~~i~aa~~~g------v~~~V~~Ss~~~~~~~-------~  113 (285)
T TIGR03649        74 VAPPIP---------------DLAP------------PMIKFIDFARSKG------VRRFVLLSASIIEKGG-------P  113 (285)
T ss_pred             eCCCCC---------------ChhH------------HHHHHHHHHHHcC------CCEEEEeeccccCCCC-------c
Confidence            876311               0000            1122333444443      4689999986543321       1


Q ss_pred             chHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccccccc-hHHHHH---HHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy12833        165 SKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPLLSML-NEKVRN---FLARSIPAPQRLGHPDEFAQLVQSIITNPL  239 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  239 (254)
                      .+...+.+.       .. .|+....++|+++..++.... .....+   .....-.....+++++|+|+.+..++.++.
T Consensus       114 ~~~~~~~~l-------~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~  186 (285)
T TIGR03649       114 AMGQVHAHL-------DSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKV  186 (285)
T ss_pred             hHHHHHHHH-------HhccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCC
Confidence            222222222       22 489999999998866542111 011100   000000011347799999999999998765


Q ss_pred             cccceEEecCCc
Q psy12833        240 INGEVIRIDGAL  251 (254)
Q Consensus       240 ~~G~~i~~~gG~  251 (254)
                      -.|+.+++-|+.
T Consensus       187 ~~~~~~~l~g~~  198 (285)
T TIGR03649       187 APNTDYVVLGPE  198 (285)
T ss_pred             cCCCeEEeeCCc
Confidence            567777777654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.45  E-value=1.2e-12  Score=106.67  Aligned_cols=156  Identities=22%  Similarity=0.240  Sum_probs=97.6

Q ss_pred             EeCCCChHHHHHHHHHHHcCC--EEEEeeCCCch---hHHHHHH-------------hCCCceEEecCCCCHH------H
Q psy12833          9 VTGGASGLGKATVERIVREGG--RVVLCDLPTSE---GESVAKE-------------LGPDVKFAPVDVTSEE------D   64 (254)
Q Consensus         9 ItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~---~~~~~~~-------------~~~~~~~~~~Dls~~~------~   64 (254)
                      ||||||.||.++..+|++++.  +|++..|....   .+++.+.             ...+++++..|++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997643   2333221             2578999999999863      3


Q ss_pred             HHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEE
Q psy12833         65 VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVI  144 (254)
Q Consensus        65 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  144 (254)
                      .+.+.+       .+|+|||||+.....             ..+.+..++|+.|+.++++.+..    .+      ..++
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~-------------~~~~~~~~~NV~gt~~ll~la~~----~~------~~~~  130 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN-------------APYSELRAVNVDGTRNLLRLAAQ----GK------RKRF  130 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS--------------S--EEHHHHHHHHHHHHHHHTS----SS---------E
T ss_pred             hhcccc-------ccceeeecchhhhhc-------------ccchhhhhhHHHHHHHHHHHHHh----cc------Ccce
Confidence            333333       589999999864321             13344678999999999887762    11      3489


Q ss_pred             EEEeccccc--cC------------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccc
Q psy12833        145 INTASIAAY--EG------------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT  197 (254)
Q Consensus       145 i~vss~~~~--~~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t  197 (254)
                      +++||....  ..                  ......|..||...+.+.+..+.+   .|+.+..++||.+-.
T Consensus       131 ~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  131 HYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVG  200 (249)
T ss_dssp             EEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-
T ss_pred             EEeccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccc
Confidence            999993211  11                  022358999999999999887764   478899999998866

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN00016 RNA-binding protein; Provisional

Probab=99.44  E-value=9.7e-12  Score=107.54  Aligned_cols=196  Identities=20%  Similarity=0.242  Sum_probs=124.5

Q ss_pred             CcEEEEe----CCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH-------HHh-CCCceEEecCCCCHHHHHHHHHH
Q psy12833          4 GVVGLVT----GGASGLGKATVERIVREGGRVVLCDLPTSEGESVA-------KEL-GPDVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         4 ~~~~lIt----Gas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      .+++|||    ||+|.||+.++++|.++|++|+++.|+......+.       .++ ...+.++.+|+.|   +.+++. 
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~-  127 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA-  127 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc-
Confidence            3689999    99999999999999999999999999876432221       122 2348889999876   333331 


Q ss_pred             HHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         72 CKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                          ..++|+|||+++.               ..+           +.    +.++....+..      -+++|++||..
T Consensus       128 ----~~~~d~Vi~~~~~---------------~~~-----------~~----~~ll~aa~~~g------vkr~V~~SS~~  167 (378)
T PLN00016        128 ----GAGFDVVYDNNGK---------------DLD-----------EV----EPVADWAKSPG------LKQFLFCSSAG  167 (378)
T ss_pred             ----cCCccEEEeCCCC---------------CHH-----------HH----HHHHHHHHHcC------CCEEEEEccHh
Confidence                1368999998652               111           11    22233333332      35899999986


Q ss_pred             cccCCCC--------CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-chHHHHHHHHhc--CCCC--
Q psy12833        152 AYEGQSG--------QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-LNEKVRNFLARS--IPAP--  218 (254)
Q Consensus       152 ~~~~~~~--------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~--~~~~--  218 (254)
                      .+.+...        ...+. +|...+.+.+       ..++.+..++|+.+..+.... ............  ++.+  
T Consensus       168 vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~  239 (378)
T PLN00016        168 VYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGS  239 (378)
T ss_pred             hcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCC
Confidence            6543211        01112 6777766543       347899999999988764322 111122222221  1111  


Q ss_pred             ----CCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        219 ----QRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       219 ----~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                          ..+++++|+|+++..++..+...|+++++.|+.
T Consensus       240 g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~  276 (378)
T PLN00016        240 GIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDR  276 (378)
T ss_pred             CCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCC
Confidence                135689999999999998766678999998765

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.43  E-value=1.4e-11  Score=102.52  Aligned_cols=208  Identities=17%  Similarity=0.142  Sum_probs=118.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a   86 (254)
                      +|||||+|.||.+++++|+++|++|++++|+.+.......     ..  ..|+.. ..       ..+.+.++|+|||+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~--~~~~~~-~~-------~~~~~~~~D~Vvh~a   65 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----EG--YKPWAP-LA-------ESEALEGADAVINLA   65 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----ee--eecccc-cc-------hhhhcCCCCEEEECC
Confidence            5899999999999999999999999999998765432210     01  112221 11       122334799999999


Q ss_pred             ccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC----------
Q psy12833         87 GISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ----------  156 (254)
Q Consensus        87 g~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~----------  156 (254)
                      +......  .      ...+.....++.|+.+..++++++...-.  +      ...+++.|+...+...          
T Consensus        66 ~~~~~~~--~------~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~------~~~~i~~S~~~~yg~~~~~~~~E~~~  129 (292)
T TIGR01777        66 GEPIADK--R------WTEERKQEIRDSRIDTTRALVEAIAAAEQ--K------PKVFISASAVGYYGTSEDRVFTEEDS  129 (292)
T ss_pred             CCCcccc--c------CCHHHHHHHHhcccHHHHHHHHHHHhcCC--C------ceEEEEeeeEEEeCCCCCCCcCcccC
Confidence            8642210  1      23345566778899988888777654210  0      1345555543222111          


Q ss_pred             C-CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHh----cCC---CCCCCCCHHHHH
Q psy12833        157 S-GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR----SIP---APQRLGHPDEFA  228 (254)
Q Consensus       157 ~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~va  228 (254)
                      + +...|+..+...+...+    .....++.+..++|+.+..+.... .......+..    ...   ....+++++|+|
T Consensus       130 ~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva  204 (292)
T TIGR01777       130 PAGDDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGGA-LAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLV  204 (292)
T ss_pred             CCCCChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcch-hHHHHHHHhcCcccccCCCCcccccEeHHHHH
Confidence            0 11112222222222221    223457999999999997763211 1111111110    011   113578999999


Q ss_pred             HHHHHHhcCCCcccceEEecCCc
Q psy12833        229 QLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       229 ~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      +.+..++..+...| ++++-++.
T Consensus       205 ~~i~~~l~~~~~~g-~~~~~~~~  226 (292)
T TIGR01777       205 QLILFALENASISG-PVNATAPE  226 (292)
T ss_pred             HHHHHHhcCcccCC-ceEecCCC
Confidence            99999997644444 56665543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK12320 hypothetical protein; Provisional

Probab=99.41  E-value=4.7e-11  Score=108.95  Aligned_cols=186  Identities=16%  Similarity=0.168  Sum_probs=119.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|.||++++++|.++|++|++++|.....      ...++.++++|++|+. +.+++.       ++|++||+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d~~-l~~al~-------~~D~VIHL   67 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------LDPRVDYVCASLRNPV-LQELAG-------EADAVIHL   67 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------ccCCceEEEccCCCHH-HHHHhc-------CCCEEEEc
Confidence            699999999999999999999999999999864321      1246889999999873 433332       68999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhc
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS  165 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~s  165 (254)
                      |+...            ...      ..+|+.++.++++++..    .       ..++|++||..+.   +.  .|.  
T Consensus        68 Aa~~~------------~~~------~~vNv~Gt~nLleAA~~----~-------GvRiV~~SS~~G~---~~--~~~--  111 (699)
T PRK12320         68 APVDT------------SAP------GGVGITGLAHVANAAAR----A-------GARLLFVSQAAGR---PE--LYR--  111 (699)
T ss_pred             CccCc------------cch------hhHHHHHHHHHHHHHHH----c-------CCeEEEEECCCCC---Cc--ccc--
Confidence            97521            011      24788888888777643    2       2379999886431   11  132  


Q ss_pred             hHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHH-HHHHHhcCC-CCCCCCCHHHHHHHHHHHhcCCCcccc
Q psy12833        166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV-RNFLARSIP-APQRLGHPDEFAQLVQSIITNPLINGE  243 (254)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~va~~~~~l~~~~~~~G~  243 (254)
                        ..+.+.+       ..++.+..+.|..+..+......... ......... .+-..++++|++++++.+++.+. +| 
T Consensus       112 --~aE~ll~-------~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~-~G-  180 (699)
T PRK12320        112 --QAETLVS-------TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR-NG-  180 (699)
T ss_pred             --HHHHHHH-------hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC-CC-
Confidence              1222221       13467788888888776332211111 111111111 11234599999999999887542 45 


Q ss_pred             eEEecCCcc
Q psy12833        244 VIRIDGALR  252 (254)
Q Consensus       244 ~i~~~gG~~  252 (254)
                      ++++-||..
T Consensus       181 iyNIG~~~~  189 (699)
T PRK12320        181 VVDLATPDT  189 (699)
T ss_pred             EEEEeCCCe
Confidence            899987754

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.40  E-value=1.3e-11  Score=98.50  Aligned_cols=204  Identities=18%  Similarity=0.212  Sum_probs=121.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a   86 (254)
                      ++||||||-||++++.+|.+.|++|++..|+..+.....   ...+.       ..+    .+++....  ++|++||.|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---~~~v~-------~~~----~~~~~~~~--~~DavINLA   64 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---HPNVT-------LWE----GLADALTL--GIDAVINLA   64 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---Ccccc-------ccc----hhhhcccC--CCCEEEECC
Confidence            589999999999999999999999999999887654321   11111       111    11111111  699999999


Q ss_pred             ccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhch
Q psy12833         87 GISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK  166 (254)
Q Consensus        87 g~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~sK  166 (254)
                      |..-....+        +.+.-+..    ..|.+..++.+...+.+.+.     +.++..-+|..++.+......|.-..
T Consensus        65 G~~I~~rrW--------t~~~K~~i----~~SRi~~T~~L~e~I~~~~~-----~P~~~isaSAvGyYG~~~~~~~tE~~  127 (297)
T COG1090          65 GEPIAERRW--------TEKQKEEI----RQSRINTTEKLVELIAASET-----KPKVLISASAVGYYGHSGDRVVTEES  127 (297)
T ss_pred             CCccccccC--------CHHHHHHH----HHHHhHHHHHHHHHHHhccC-----CCcEEEecceEEEecCCCceeeecCC
Confidence            976544422        23333333    33666677777777765431     23444445555665543333332222


Q ss_pred             ----HHHHHhHHHHHHHh---ccCCcEEEEEecCCcccccc---ccchHHHHHHHHhcCCC---CCCCCCHHHHHHHHHH
Q psy12833        167 ----SGIVGMTLPMARDL---AGAGIRVNTIAPGLFDTPLL---SMLNEKVRNFLARSIPA---PQRLGHPDEFAQLVQS  233 (254)
Q Consensus       167 ----~a~~~~~~~la~e~---~~~~i~v~~v~Pg~~~t~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~va~~~~~  233 (254)
                          -.+..+++.|-.+-   ...|+||..++-|++-++--   ....+...-.....+-.   +-.+++.||+++++.|
T Consensus       128 ~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~f  207 (297)
T COG1090         128 PPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILF  207 (297)
T ss_pred             CCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHH
Confidence                23444555544443   23489999999999866432   11122221111122221   1347899999999999


Q ss_pred             HhcCCCcccc
Q psy12833        234 IITNPLINGE  243 (254)
Q Consensus       234 l~~~~~~~G~  243 (254)
                      +++++.+.|-
T Consensus       208 ll~~~~lsGp  217 (297)
T COG1090         208 LLENEQLSGP  217 (297)
T ss_pred             HHhCcCCCCc
Confidence            9988767664

>KOG4022|consensus

Probab=99.40  E-value=9.9e-11  Score=86.14  Aligned_cols=216  Identities=19%  Similarity=0.161  Sum_probs=147.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      +-.+|+|-||-+.+|.+|++.|.++++-|.-++-.+.+-.       +.-..+..|-+=.++-+.+++++.+.+  .++|
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            3468999999999999999999999999887766543211       122345555555677778888888765  3799


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      .++|-||.+....-..-     --.....-++.-.+++.....+.+..+++.        .|.+-..+...+..+.|+..
T Consensus        75 av~CVAGGWAGGnAksK-----dl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--------GGLL~LtGAkaAl~gTPgMI  141 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAKSK-----DLVKNADLMWKQSVWTSAISAKLATTHLKP--------GGLLQLTGAKAALGGTPGMI  141 (236)
T ss_pred             eEEEeeccccCCCcchh-----hhhhchhhHHHHHHHHHHHHHHHHHhccCC--------CceeeecccccccCCCCccc
Confidence            99999987644321110     011122223333344444444444555443        34555555566778899999


Q ss_pred             cchhchHHHHHhHHHHHHHhc--cCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        161 AYSASKSGIVGMTLPMARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      .|+++|+|+..++++|+-+-.  +.|--+..+.|=-+||||.+..-++.         ....+.+.+.+++..+....  
T Consensus       142 GYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~A---------DfssWTPL~fi~e~flkWtt~~  212 (236)
T KOG4022|consen  142 GYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNA---------DFSSWTPLSFISEHFLKWTTET  212 (236)
T ss_pred             chhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCC---------cccCcccHHHHHHHHHHHhccC
Confidence            999999999999999998764  45778899999999999987643321         01556678999999888885  


Q ss_pred             CCCcccceEEe
Q psy12833        237 NPLINGEVIRI  247 (254)
Q Consensus       237 ~~~~~G~~i~~  247 (254)
                      +..-+|..+.+
T Consensus       213 ~RPssGsLlqi  223 (236)
T KOG4022|consen  213 SRPSSGSLLQI  223 (236)
T ss_pred             CCCCCCceEEE
Confidence            34557766655

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.39  E-value=4.9e-11  Score=91.84  Aligned_cols=160  Identities=17%  Similarity=0.150  Sum_probs=112.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +++||||| |+|.++++.|+++|++|++++|+.++.+.+...+  ..++.++++|++|++++.++++.+.+.++++|++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            69999998 7777899999999999999999887776665544  34678899999999999999999999999999999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      +.+-..                            ++-.+.++....-.+.+      +-+++.+-+..+..+        
T Consensus        81 ~~vh~~----------------------------~~~~~~~~~~~~gv~~~------~~~~~h~~gs~~~~~--------  118 (177)
T PRK08309         81 AWIHSS----------------------------AKDALSVVCRELDGSSE------TYRLFHVLGSAASDP--------  118 (177)
T ss_pred             Eecccc----------------------------chhhHHHHHHHHccCCC------CceEEEEeCCcCCch--------
Confidence            775432                            22223333333322222      335665554433111        


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                                +..+......++...-|..|++..+-.                  .|+.+=||+++.++..++
T Consensus       119 ----------~~~~~~~~~~~~~~~~i~lgf~~~~~~------------------~rwlt~~ei~~gv~~~~~  163 (177)
T PRK08309        119 ----------RIPSEKIGPARCSYRRVILGFVLEDTY------------------SRWLTHEEISDGVIKAIE  163 (177)
T ss_pred             ----------hhhhhhhhhcCCceEEEEEeEEEeCCc------------------cccCchHHHHHHHHHHHh
Confidence                      112233334556777788888866432                  778889999999999885

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.36  E-value=3.2e-11  Score=108.68  Aligned_cols=123  Identities=18%  Similarity=0.208  Sum_probs=86.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC---EEEEeeCCCch---hHHHHHHh---------------------CCCceE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG---RVVLCDLPTSE---GESVAKEL---------------------GPDVKF   54 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~---~v~~~~r~~~~---~~~~~~~~---------------------~~~~~~   54 (254)
                      ++||+++||||||.||+.+++.|++.+.   +|++..|....   .+++.+++                     ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4789999999999999999999998653   67888885432   22221111                     246888


Q ss_pred             EecCCCCHH------HHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHH
Q psy12833         55 APVDVTSEE------DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQ  128 (254)
Q Consensus        55 ~~~Dls~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  128 (254)
                      +..|+++++      ..+.+.+       .+|+|||+|+....             .++.+..+++|+.++.++++.+..
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-------------~~~~~~a~~vNV~GT~nLLelA~~  256 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-------------DERYDVAIDINTRGPCHLMSFAKK  256 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-------------ccCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999872      3333332       68999999986431             134667889999999999887765


Q ss_pred             HHHhccCCCCCCCcEEEEEeccccc
Q psy12833        129 LIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus       129 ~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                      .-   .      ..+++++||....
T Consensus       257 ~~---~------lk~fV~vSTayVy  272 (605)
T PLN02503        257 CK---K------LKLFLQVSTAYVN  272 (605)
T ss_pred             cC---C------CCeEEEccCceee
Confidence            31   1      2467888776543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.35  E-value=1.5e-10  Score=115.41  Aligned_cols=218  Identities=18%  Similarity=0.165  Sum_probs=139.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcC----CEEEEeeCCCchhH---HHHHHh----------CCCceEEecCCCCHHHH-
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREG----GRVVLCDLPTSEGE---SVAKEL----------GPDVKFAPVDVTSEEDV-   65 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g----~~v~~~~r~~~~~~---~~~~~~----------~~~~~~~~~Dls~~~~~-   65 (254)
                      .++++||||+|.+|.+++.+|.+++    ++|+...|+.....   .+.+..          ..++.++.+|++++.-- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4789999999999999999999887    78888888754322   221111          24788999999865210 


Q ss_pred             -HHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEE
Q psy12833         66 -QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVI  144 (254)
Q Consensus        66 -~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  144 (254)
                       ...++++.   ..+|++||||+....    .      .+   +......|+.++.++++.+..    .+      ..++
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~----~------~~---~~~~~~~nv~gt~~ll~~a~~----~~------~~~~ 1104 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVHW----V------YP---YSKLRDANVIGTINVLNLCAE----GK------AKQF 1104 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEecC----c------cC---HHHHHHhHHHHHHHHHHHHHh----CC------CceE
Confidence             11222222   268999999986421    1      12   233456799999999887643    22      3579


Q ss_pred             EEEeccccccC-----------------C-----------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcc
Q psy12833        145 INTASIAAYEG-----------------Q-----------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFD  196 (254)
Q Consensus       145 i~vss~~~~~~-----------------~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~  196 (254)
                      +++||.....+                 .           .....|+.+|.+.+.+++..+.    .|+.+..++||.+.
T Consensus      1105 v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~ 1180 (1389)
T TIGR03443      1105 SFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVT 1180 (1389)
T ss_pred             EEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccc
Confidence            99999754411                 0           0124699999999998876533    48999999999997


Q ss_pred             ccccccc---hHHHHHHHH-----hcCCC---CCCCCCHHHHHHHHHHHhcCCC--cccceEEecCCc
Q psy12833        197 TPLLSML---NEKVRNFLA-----RSIPA---PQRLGHPDEFAQLVQSIITNPL--INGEVIRIDGAL  251 (254)
Q Consensus       197 t~~~~~~---~~~~~~~~~-----~~~~~---~~~~~~~~~va~~~~~l~~~~~--~~G~~i~~~gG~  251 (254)
                      .+.....   ...+.....     ...|.   ...+.++++++++++.++..+.  ..+.++++.++.
T Consensus      1181 G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1181 GDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             cCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            6532211   111111111     12221   1346789999999999985432  234567676553

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.34  E-value=1.4e-10  Score=107.34  Aligned_cols=195  Identities=14%  Similarity=0.144  Sum_probs=121.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      +++|||||+|.||+++++.|.++|++|..                     ...|++|.+.+.+.+++.     ++|+|||
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~---------------------~~~~l~d~~~v~~~i~~~-----~pd~Vih  434 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEY---------------------GKGRLEDRSSLLADIRNV-----KPTHVFN  434 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEe---------------------eccccccHHHHHHHHHhh-----CCCEEEE
Confidence            57999999999999999999999988731                     124678888887777654     7999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc----------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE----------  154 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~----------  154 (254)
                      +|+....... +      ...++.+..+++|+.++.++++++...    .       -+++++||...+.          
T Consensus       435 ~Aa~~~~~~~-~------~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-------~~~v~~Ss~~v~~~~~~~~~~~~  496 (668)
T PLN02260        435 AAGVTGRPNV-D------WCESHKVETIRANVVGTLTLADVCREN----G-------LLMMNFATGCIFEYDAKHPEGSG  496 (668)
T ss_pred             CCcccCCCCC-C------hHHhCHHHHHHHHhHHHHHHHHHHHHc----C-------CeEEEEcccceecCCcccccccC
Confidence            9997542111 1      123455788999999999999988753    1       2345555533211          


Q ss_pred             -C-------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHH
Q psy12833        155 -G-------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       155 -~-------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (254)
                       |       .+....|+.+|.+.+.+++.+..   ...+++..+..+....+  .++...+... .+.+..+......++
T Consensus       497 ~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~~~~~~~~--~nfv~~~~~~-~~~~~vp~~~~~~~~  570 (668)
T PLN02260        497 IGFKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPISSDLSNP--RNFITKISRY-NKVVNIPNSMTVLDE  570 (668)
T ss_pred             CCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEecccCCCCc--cHHHHHHhcc-ceeeccCCCceehhh
Confidence             1       12336899999999999877632   23566665553222111  1111111111 111222233455666


Q ss_pred             HHHHHHHHhcCCCcccceEEecCCc
Q psy12833        227 FAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       227 va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      ++..++.++...  .|.++++.++.
T Consensus       571 ~~~~~~~l~~~~--~~giyni~~~~  593 (668)
T PLN02260        571 LLPISIEMAKRN--LRGIWNFTNPG  593 (668)
T ss_pred             HHHHHHHHHHhC--CCceEEecCCC
Confidence            776667777532  25688875543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.30  E-value=1.5e-11  Score=98.55  Aligned_cols=99  Identities=14%  Similarity=0.187  Sum_probs=74.4

Q ss_pred             EEeCC-CChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCC
Q psy12833          8 LVTGG-ASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus         8 lItGa-s~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a   86 (254)
                      .||.. |||||+++|++|+++|++|+++++... +.    .    .....||+++.+++.++++.+.+.++++|++||||
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~----~----~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA   88 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK----P----EPHPNLSIREIETTKDLLITLKELVQEHDILIHSM   88 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc----c----ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            34443 579999999999999999999876321 10    0    11246899999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHH
Q psy12833         87 GISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR  124 (254)
Q Consensus        87 g~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  124 (254)
                      |+....++..      .+.++|++.+..   +.++..+
T Consensus        89 gv~d~~~~~~------~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        89 AVSDYTPVYM------TDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             Eeccccchhh------CCHHHHhhhcch---hhhhccc
Confidence            9865554444      788888877444   4555544

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.27  E-value=1.3e-10  Score=96.92  Aligned_cols=162  Identities=19%  Similarity=0.153  Sum_probs=116.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCc------hhHHHHH-------HhCCCceEEecCCCCH------HH
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTS------EGESVAK-------ELGPDVKFAPVDVTSE------ED   64 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~------~~~~~~~-------~~~~~~~~~~~Dls~~------~~   64 (254)
                      +++++|||||.+|+.+..+|..+ .++|+..-|-++      ++++..+       ....++..+..|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            47999999999999999988855 469998877544      2222222       2267899999999833      33


Q ss_pred             HHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEE
Q psy12833         65 VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVI  144 (254)
Q Consensus        65 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  144 (254)
                      .+++.+       .+|.||||++....             .....+....|+.|+..++|.+...    +      .+-+
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~-------------v~pYs~L~~~NVlGT~evlrLa~~g----k------~Kp~  130 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNH-------------VFPYSELRGANVLGTAEVLRLAATG----K------PKPL  130 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcc-------------cCcHHHhcCcchHhHHHHHHHHhcC----C------Ccee
Confidence            444444       68999999986421             2234566778999999888876652    1      3458


Q ss_pred             EEEeccccccCC--------------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc
Q psy12833        145 INTASIAAYEGQ--------------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL  200 (254)
Q Consensus       145 i~vss~~~~~~~--------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~  200 (254)
                      .+|||++.....                    .....|+.||.+.+.+++....    .|+++..++||++-.+..
T Consensus       131 ~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         131 HYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             EEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccCc
Confidence            999998755321                    1236899999999998887654    489999999999966544

>KOG1429|consensus

Probab=99.25  E-value=1.4e-10  Score=92.77  Aligned_cols=200  Identities=16%  Similarity=0.203  Sum_probs=136.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      .+++++||||.|.||++++..|..+|+.|++.+--...-++....+  ..++..+..|+..+     ++.       .+|
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~-------evD   93 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK-------EVD   93 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH-------Hhh
Confidence            5689999999999999999999999999999887554444333333  34566677777654     555       468


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc------
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE------  154 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~------  154 (254)
                      -++|.|....+..+..          ...+.+..|+.++.+++..+...           +.+++..|+...+.      
T Consensus        94 ~IyhLAapasp~~y~~----------npvktIktN~igtln~lglakrv-----------~aR~l~aSTseVYgdp~~hp  152 (350)
T KOG1429|consen   94 QIYHLAAPASPPHYKY----------NPVKTIKTNVIGTLNMLGLAKRV-----------GARFLLASTSEVYGDPLVHP  152 (350)
T ss_pred             hhhhhccCCCCccccc----------CccceeeecchhhHHHHHHHHHh-----------CceEEEeecccccCCcccCC
Confidence            8899988766543322          12344778888988887766553           45788888876553      


Q ss_pred             ----------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHH----hcCC----
Q psy12833        155 ----------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLA----RSIP----  216 (254)
Q Consensus       155 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~----~~~~----  216 (254)
                                |....+.|...|...+.++....+   ..||.+....+-.+..|.+...+......+.    +..|    
T Consensus       153 q~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k---~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~  229 (350)
T KOG1429|consen  153 QVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHK---QEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVY  229 (350)
T ss_pred             CccccccccCcCCchhhhhHHHHHHHHHHHHhhc---ccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEE
Confidence                      223677999999988888877655   4578777777766666655443333222211    1111    


Q ss_pred             -----CCCCCCCHHHHHHHHHHHhcCCC
Q psy12833        217 -----APQRLGHPDEFAQLVQSIITNPL  239 (254)
Q Consensus       217 -----~~~~~~~~~~va~~~~~l~~~~~  239 (254)
                           . +.+.+++|+.+.++.|..+++
T Consensus       230 g~G~qt-RSF~yvsD~Vegll~Lm~s~~  256 (350)
T KOG1429|consen  230 GDGKQT-RSFQYVSDLVEGLLRLMESDY  256 (350)
T ss_pred             cCCcce-EEEEeHHHHHHHHHHHhcCCC
Confidence                 1 446689999999999996543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.22  E-value=1.7e-10  Score=102.03  Aligned_cols=153  Identities=16%  Similarity=0.169  Sum_probs=108.2

Q ss_pred             EeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCCcc
Q psy12833          9 VTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGI   88 (254)
Q Consensus         9 ItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~   88 (254)
                      |+||++|+|.++++.|...|++|+.+.+.......                              ....+++.+++.+..
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~------------------------------~~~~~~~~~~~d~~~   92 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA------------------------------GWGDRFGALVFDATG   92 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccccc------------------------------CcCCcccEEEEECCC
Confidence            88888999999999999999999987665431100                              001145544443221


Q ss_pred             CCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhchHH
Q psy12833         89 SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSG  168 (254)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~sK~a  168 (254)
                      .             ...+++.        +.+.+.+..++.|..        .++||+++|..+..+   ...|+++|++
T Consensus        93 ~-------------~~~~~l~--------~~~~~~~~~l~~l~~--------~griv~i~s~~~~~~---~~~~~~akaa  140 (450)
T PRK08261         93 I-------------TDPADLK--------ALYEFFHPVLRSLAP--------CGRVVVLGRPPEAAA---DPAAAAAQRA  140 (450)
T ss_pred             C-------------CCHHHHH--------HHHHHHHHHHHhccC--------CCEEEEEccccccCC---chHHHHHHHH
Confidence            1             1233322        334556666776643        579999999876543   3469999999


Q ss_pred             HHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CCcccceEE
Q psy12833        169 IVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIR  246 (254)
Q Consensus       169 ~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~~~G~~i~  246 (254)
                      +.+++|++++|+ +.+++++.+.|+.                           ..+++++..+.|+++.  .+++|+.+.
T Consensus       141 l~gl~rsla~E~-~~gi~v~~i~~~~---------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~  192 (450)
T PRK08261        141 LEGFTRSLGKEL-RRGATAQLVYVAP---------------------------GAEAGLESTLRFFLSPRSAYVSGQVVR  192 (450)
T ss_pred             HHHHHHHHHHHh-hcCCEEEEEecCC---------------------------CCHHHHHHHHHHhcCCccCCccCcEEE
Confidence            999999999999 7899999998874                           2467777788888863  578888888


Q ss_pred             ecCCc
Q psy12833        247 IDGAL  251 (254)
Q Consensus       247 ~~gG~  251 (254)
                      ++++.
T Consensus       193 ~~~~~  197 (450)
T PRK08261        193 VGAAD  197 (450)
T ss_pred             ecCCc
Confidence            87764

>KOG0747|consensus

Probab=99.22  E-value=2.7e-10  Score=91.18  Aligned_cols=214  Identities=17%  Similarity=0.143  Sum_probs=146.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHc--CCEEEEeeC---CCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVRE--GGRVVLCDL---PTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~--g~~v~~~~r---~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      .+.++||||.|.||...+..++.+  .++.+.++.   ... ++. .++.  ..+.+|++.|+.|...+..++..-    
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~-l~~~~n~p~ykfv~~di~~~~~~~~~~~~~----   79 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKN-LEPVRNSPNYKFVEGDIADADLVLYLFETE----   79 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cch-hhhhccCCCceEeeccccchHHHHhhhccC----
Confidence            478999999999999999998876  234433322   111 222 2222  578999999999998877776643    


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-  155 (254)
                       ++|.|+|-|+......          +.-+-......|++++..|++.......         -.++|.+|+-..+.. 
T Consensus        80 -~id~vihfaa~t~vd~----------s~~~~~~~~~nnil~t~~Lle~~~~sg~---------i~~fvhvSTdeVYGds  139 (331)
T KOG0747|consen   80 -EIDTVIHFAAQTHVDR----------SFGDSFEFTKNNILSTHVLLEAVRVSGN---------IRRFVHVSTDEVYGDS  139 (331)
T ss_pred             -chhhhhhhHhhhhhhh----------hcCchHHHhcCCchhhhhHHHHHHhccC---------eeEEEEecccceecCc
Confidence             8999999998654332          1122234467899999999888776542         368999998664432 


Q ss_pred             -----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--chHHHHHHHHhcCCC-----
Q psy12833        156 -----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPA-----  217 (254)
Q Consensus       156 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~-----  217 (254)
                                 .-+...|+++|+|.+++.+++.+.|   |+.+..++-+.+..|-+-.  ..+.+.......-+.     
T Consensus       140 ~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~  216 (331)
T KOG0747|consen  140 DEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGD  216 (331)
T ss_pred             cccccccccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecC
Confidence                       1245689999999999999998855   7888888888888775532  223222211111111     


Q ss_pred             ---CCCCCCHHHHHHHHHHHhcCCCcccceEEe
Q psy12833        218 ---PQRLGHPDEFAQLVQSIITNPLINGEVIRI  247 (254)
Q Consensus       218 ---~~~~~~~~~va~~~~~l~~~~~~~G~~i~~  247 (254)
                         ....++++|+++++...+... --|+++++
T Consensus       217 g~~~rs~l~veD~~ea~~~v~~Kg-~~geIYNI  248 (331)
T KOG0747|consen  217 GLQTRSYLYVEDVSEAFKAVLEKG-ELGEIYNI  248 (331)
T ss_pred             cccceeeEeHHHHHHHHHHHHhcC-Cccceeec
Confidence               045679999999999888652 25888887

>KOG2865|consensus

Probab=99.09  E-value=5.1e-09  Score=84.09  Aligned_cols=206  Identities=19%  Similarity=0.186  Sum_probs=139.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +|-++-|.||||.+|+-++++|++.|-+|++=.|-.+.--.-.+-.+  .++.++..|+.|++|++++++       .-+
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk-------~sN  132 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK-------HSN  132 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH-------hCc
Confidence            46689999999999999999999999999998885543221111112  468899999999999999999       569


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++||..|---...-        .+      ..++|..++-.+++.....-.          -++|.+|+..+...  .-+
T Consensus       133 VVINLIGrd~eTkn--------f~------f~Dvn~~~aerlAricke~GV----------erfIhvS~Lganv~--s~S  186 (391)
T KOG2865|consen  133 VVINLIGRDYETKN--------FS------FEDVNVHIAERLARICKEAGV----------ERFIHVSCLGANVK--SPS  186 (391)
T ss_pred             EEEEeeccccccCC--------cc------cccccchHHHHHHHHHHhhCh----------hheeehhhcccccc--ChH
Confidence            99999885322211        12      235677777666666554332          36999999886543  334


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHh--cCCCC-------CCCCCHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR--SIPAP-------QRLGHPDEFAQLV  231 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~va~~~  231 (254)
                      .|--+|++.+--++.   ++.    -...+.|..+.....+.++. +..++.+  .+|+.       +..+++-|||++|
T Consensus       187 r~LrsK~~gE~aVrd---afP----eAtIirPa~iyG~eDrfln~-ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~I  258 (391)
T KOG2865|consen  187 RMLRSKAAGEEAVRD---AFP----EATIIRPADIYGTEDRFLNY-YASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAI  258 (391)
T ss_pred             HHHHhhhhhHHHHHh---hCC----cceeechhhhcccchhHHHH-HHHHHHhcCceeeecCCcceeeccEEEehHHHHH
Confidence            677788877665554   332    34567887775544333322 1112221  12221       3456889999999


Q ss_pred             HHHhcCCCcccceEEecC
Q psy12833        232 QSIITNPLINGEVIRIDG  249 (254)
Q Consensus       232 ~~l~~~~~~~G~~i~~~g  249 (254)
                      +..+.+++-+|.++..-|
T Consensus       259 vnAvkDp~s~Gktye~vG  276 (391)
T KOG2865|consen  259 VNAVKDPDSMGKTYEFVG  276 (391)
T ss_pred             HHhccCccccCceeeecC
Confidence            999999899999998755

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.05  E-value=2.6e-08  Score=81.99  Aligned_cols=194  Identities=15%  Similarity=0.160  Sum_probs=128.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      .+|||||||.+|++++++|.++|++|.+..|+.+......    ..+.+...|+.++.++...++       ++|.++++
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~~~~l~~a~~-------G~~~~~~i   70 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----GGVEVVLGDLRDPKSLVAGAK-------GVDGVLLI   70 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----CCcEEEEeccCCHhHHHHHhc-------cccEEEEE
Confidence            6999999999999999999999999999999988877765    678999999999999999888       77888887


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhc
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS  165 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~s  165 (254)
                      .+... ..          .     ..............+...    ..       ...++.+|...+...  ....|..+
T Consensus        71 ~~~~~-~~----------~-----~~~~~~~~~~~~~a~~a~----~~-------~~~~~~~s~~~~~~~--~~~~~~~~  121 (275)
T COG0702          71 SGLLD-GS----------D-----AFRAVQVTAVVRAAEAAG----AG-------VKHGVSLSVLGADAA--SPSALARA  121 (275)
T ss_pred             ecccc-cc----------c-----chhHHHHHHHHHHHHHhc----CC-------ceEEEEeccCCCCCC--CccHHHHH
Confidence            76532 11          0     112222333333333333    11       346777777665553  33578889


Q ss_pred             hHHHHHhHHHHHHHhccCCcEEEEEe-cCCccccccccchHHHHHHHHhc---CCCC---CCCCCHHHHHHHHHHHhcCC
Q psy12833        166 KSGIVGMTLPMARDLAGAGIRVNTIA-PGLFDTPLLSMLNEKVRNFLARS---IPAP---QRLGHPDEFAQLVQSIITNP  238 (254)
Q Consensus       166 K~a~~~~~~~la~e~~~~~i~v~~v~-Pg~~~t~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~va~~~~~l~~~~  238 (254)
                      |...+...++       .|+.-..+. |+++.......    ........   .+.+   -..+..+|++..+...+..+
T Consensus       122 ~~~~e~~l~~-------sg~~~t~lr~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~  190 (275)
T COG0702         122 KAAVEAALRS-------SGIPYTTLRRAAFYLGAGAAF----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAP  190 (275)
T ss_pred             HHHHHHHHHh-------cCCCeEEEecCeeeeccchhH----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCC
Confidence            9887776655       356544555 44444332211    11111111   1111   23568899999999999866


Q ss_pred             CcccceEEecCC
Q psy12833        239 LINGEVIRIDGA  250 (254)
Q Consensus       239 ~~~G~~i~~~gG  250 (254)
                      ...|+++.+.|-
T Consensus       191 ~~~~~~~~l~g~  202 (275)
T COG0702         191 ATAGRTYELAGP  202 (275)
T ss_pred             cccCcEEEccCC
Confidence            677888887664

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.98  E-value=3.2e-09  Score=91.65  Aligned_cols=81  Identities=25%  Similarity=0.315  Sum_probs=63.4

Q ss_pred             CCCcEEEEeCC----------------CChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGG----------------ASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGa----------------s~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~   65 (254)
                      ++||++|||||                ||++|+++|++|+++|++|++++++.+ .+     .  ......+|+++.+++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~--~~~~~~~dv~~~~~~  257 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T--PAGVKRIDVESAQEM  257 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C--CCCcEEEccCCHHHH
Confidence            57999999999                555999999999999999999998753 11     1  112356899998887


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCcc
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAFK   93 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~   93 (254)
                      .+.+.   +.++++|++|||||+....+
T Consensus       258 ~~~v~---~~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        258 LDAVL---AALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             HHHHH---HhcCCCCEEEEccccccccc
Confidence            77766   45778999999999865443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.95  E-value=1.1e-08  Score=82.57  Aligned_cols=192  Identities=20%  Similarity=0.240  Sum_probs=116.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch--hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSE--GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++|+||+|.+|+.+++.|.+.+++|.+..|+.+.  .+++ ++  ..++.+++|+.|++++.++++       ++|.+|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l-~~--~g~~vv~~d~~~~~~l~~al~-------g~d~v~~   70 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQL-QA--LGAEVVEADYDDPESLVAALK-------GVDAVFS   70 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHH-HH--TTTEEEES-TT-HHHHHHHHT-------TCSEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhh-hc--ccceEeecccCCHHHHHHHHc-------CCceEEe
Confidence            6899999999999999999999999999998742  2222 22  356788999999999999998       8899998


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC----CCc
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS----GQV  160 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~----~~~  160 (254)
                      +.+...              ....        .....+++++...-          -.++|+ ||........    +..
T Consensus        71 ~~~~~~--------------~~~~--------~~~~~li~Aa~~ag----------Vk~~v~-ss~~~~~~~~~~~~p~~  117 (233)
T PF05368_consen   71 VTPPSH--------------PSEL--------EQQKNLIDAAKAAG----------VKHFVP-SSFGADYDESSGSEPEI  117 (233)
T ss_dssp             ESSCSC--------------CCHH--------HHHHHHHHHHHHHT-----------SEEEE-SEESSGTTTTTTSTTHH
T ss_pred             ecCcch--------------hhhh--------hhhhhHHHhhhccc----------cceEEE-EEecccccccccccccc
Confidence            877532              1111        12233455554432          246764 4443333211    111


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHh----cCCCC----CCC-CCHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR----SIPAP----QRL-GHPDEFAQLV  231 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~----~~~~~----~~~-~~~~~va~~~  231 (254)
                      .+-..|..++.+.+.       .++..+.++||++..+......+.. .....    .++.+    ... .+.+|+++.+
T Consensus       118 ~~~~~k~~ie~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~v  189 (233)
T PF05368_consen  118 PHFDQKAEIEEYLRE-------SGIPYTIIRPGFFMENLLPPFAPVV-DIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAV  189 (233)
T ss_dssp             HHHHHHHHHHHHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTT-CSCCTSSEEEEETTSTSEEEEEEHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhh-------ccccceeccccchhhhhhhhhcccc-cccccceEEEEccCCCccccccccHHHHHHHH
Confidence            222355554444433       3899999999998766543222200 00000    01111    123 3789999999


Q ss_pred             HHHhcCC-Cc-ccceEEecC
Q psy12833        232 QSIITNP-LI-NGEVIRIDG  249 (254)
Q Consensus       232 ~~l~~~~-~~-~G~~i~~~g  249 (254)
                      ..++.++ .. +|+.+.+.|
T Consensus       190 a~il~~p~~~~~~~~~~~~~  209 (233)
T PF05368_consen  190 AAILLDPEKHNNGKTIFLAG  209 (233)
T ss_dssp             HHHHHSGGGTTEEEEEEEGG
T ss_pred             HHHHcChHHhcCCEEEEeCC
Confidence            9999754 22 678887755

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.88  E-value=3.2e-07  Score=80.90  Aligned_cols=236  Identities=16%  Similarity=0.124  Sum_probs=143.7

Q ss_pred             CCcEEEEeCCCC-hHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGAS-GLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         3 ~~~~~lItGas~-giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      .++.+|||||+. -||.+++..|+.-|++|+++..+.. +-.+..+.+       +..+..++++++...+++.+++.+-
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            468999999985 7999999999999999998766544 233333433       4567888999999999999999997


Q ss_pred             HHcC--------------CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCC
Q psy12833         74 DSFG--------------KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDG  139 (254)
Q Consensus        74 ~~~~--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  139 (254)
                      .+-.              .+|.+|-=|+....+.+.+      .. ..-+..+.+-+++..+++-.+.+.-....     
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~------ag-sraE~~~rilLw~V~Rliggl~~~~s~r~-----  542 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELAD------AG-SRAEFAMRILLWNVLRLIGGLKKQGSSRG-----  542 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccCcccc------CC-chHHHHHHHHHHHHHHHHHHhhhhccccC-----
Confidence            6421              1455554444333222222      11 12234455556666665555444332221     


Q ss_pred             CCcEEEEEeccccccC-CCCCccchhchHHHHHhHHHHHHHhc-cCCcEEEEEecCCccccccccchHHHHHHHHhcCCC
Q psy12833        140 LRGVIINTASIAAYEG-QSGQVAYSASKSGIVGMTLPMARDLA-GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA  217 (254)
Q Consensus       140 ~~~~ii~vss~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~  217 (254)
                      ...|.-.|--.+..++ +.+-.+|+-+|++++.++--+..|-. ...+.+..-.-||+..-....-+.-+.+...+.   
T Consensus       543 v~~R~hVVLPgSPNrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~---  619 (866)
T COG4982         543 VDTRLHVVLPGSPNRGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDIIVAAIEKA---  619 (866)
T ss_pred             cccceEEEecCCCCCCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchhHHHHHHh---
Confidence            2334333333333333 44567999999999998877766652 122444455568886644333333333322221   


Q ss_pred             CCCCCCHHHHHHHHHHHhcCC---Cc--ccceEEecCCccc
Q psy12833        218 PQRLGHPDEFAQLVQSIITNP---LI--NGEVIRIDGALRM  253 (254)
Q Consensus       218 ~~~~~~~~~va~~~~~l~~~~---~~--~G~~i~~~gG~~~  253 (254)
                      --+.-+.+|+|..++.|++.+   ..  +--..++.||+..
T Consensus       620 GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~  660 (866)
T COG4982         620 GVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGE  660 (866)
T ss_pred             CceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence            134558999999999999742   12  2344556688753

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.86  E-value=1.6e-08  Score=84.14  Aligned_cols=80  Identities=19%  Similarity=0.337  Sum_probs=63.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCC---chhHHHHHHhC---CCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPT---SEGESVAKELG---PDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~---~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +++|+++|+|| ||+|++++..|++.|++ |++++|+.   ++++++.+++.   ..+.+..+|+++.+++.+.++    
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~----  198 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA----  198 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc----
Confidence            46899999999 69999999999999996 99999987   56777666652   345567789888777765544    


Q ss_pred             HcCCCcEEEeCCccC
Q psy12833         75 SFGKLDVNVNCAGIS   89 (254)
Q Consensus        75 ~~~~id~li~~ag~~   89 (254)
                         ..|++|||....
T Consensus       199 ---~~DilINaTp~G  210 (289)
T PRK12548        199 ---SSDILVNATLVG  210 (289)
T ss_pred             ---cCCEEEEeCCCC
Confidence               569999987654

>KOG1372|consensus

Probab=98.80  E-value=2e-08  Score=79.07  Aligned_cols=210  Identities=17%  Similarity=0.116  Sum_probs=135.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHH-HHHh--------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESV-AKEL--------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~-~~~~--------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |++||||-+|-=|+-+++.|+++|+.|..+-|+.+.-... .+.+        +......-.|++|...+.++++.+   
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i---  105 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI---  105 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc---
Confidence            6899999999999999999999999999776654432211 1222        455677889999999999999988   


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc--
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY--  153 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~--  153 (254)
                        +++=+.|.|+.+...--++          -.+=.-++...|++.++.+....-...       .=++...|+..-+  
T Consensus       106 --kPtEiYnLaAQSHVkvSFd----------lpeYTAeVdavGtLRlLdAi~~c~l~~-------~VrfYQAstSElyGk  166 (376)
T KOG1372|consen  106 --KPTEVYNLAAQSHVKVSFD----------LPEYTAEVDAVGTLRLLDAIRACRLTE-------KVRFYQASTSELYGK  166 (376)
T ss_pred             --CchhhhhhhhhcceEEEee----------cccceeeccchhhhhHHHHHHhcCccc-------ceeEEecccHhhccc
Confidence              6777777777654432222          111223455668877777665543332       2345444443322  


Q ss_pred             ---------cCCCCCccchhchHHHHHhHHHHHHHhcc---CCcEEEEEecCCccccccccchHHHHHHHHh--------
Q psy12833        154 ---------EGQSGQVAYSASKSGIVGMTLPMARDLAG---AGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR--------  213 (254)
Q Consensus       154 ---------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~--------  213 (254)
                               .|+.+.+.|+++|....=.+-.++..|..   .||-+|.=+|.-=.+-..+.+.........+        
T Consensus       167 v~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LG  246 (376)
T KOG1372|consen  167 VQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELG  246 (376)
T ss_pred             ccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEec
Confidence                     24456789999998766666666666644   4777777777555444444433222221111        


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        214 SIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       214 ~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      .+...+.++.+.|.+++++.+++
T Consensus       247 NL~a~RDWGhA~dYVEAMW~mLQ  269 (376)
T KOG1372|consen  247 NLSALRDWGHAGDYVEAMWLMLQ  269 (376)
T ss_pred             chhhhcccchhHHHHHHHHHHHh
Confidence            12222678899999999999995

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.79  E-value=3.5e-07  Score=69.08  Aligned_cols=196  Identities=9%  Similarity=0.012  Sum_probs=122.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++.|.||||-.|..+.++..++|+.|+.+.|+.++....     ..+..++.|+.|+.++.+.+.       +.|+||..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----~~~~i~q~Difd~~~~a~~l~-------g~DaVIsA   69 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----QGVTILQKDIFDLTSLASDLA-------GHDAVISA   69 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----ccceeecccccChhhhHhhhc-------CCceEEEe
Confidence            688999999999999999999999999999998876553     357789999999998877776       78999987


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--------C
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--------S  157 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--------~  157 (254)
                      .|...+.           ..+...+           ..+.+...++...      ..|++.|+...+..-.        |
T Consensus        70 ~~~~~~~-----------~~~~~~k-----------~~~~li~~l~~ag------v~RllVVGGAGSL~id~g~rLvD~p  121 (211)
T COG2910          70 FGAGASD-----------NDELHSK-----------SIEALIEALKGAG------VPRLLVVGGAGSLEIDEGTRLVDTP  121 (211)
T ss_pred             ccCCCCC-----------hhHHHHH-----------HHHHHHHHHhhcC------CeeEEEEcCccceEEcCCceeecCC
Confidence            7654211           1111111           1444555555433      5789999887766321        1


Q ss_pred             --CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 --GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 --~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                        +-..|..+++..+ +.+.|..   ...+.-+-++|..+-.|..+.-.-.......-.-..-...++.+|.|-+++.-+
T Consensus       122 ~fP~ey~~~A~~~ae-~L~~Lr~---~~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~  197 (211)
T COG2910         122 DFPAEYKPEALAQAE-FLDSLRA---EKSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDEL  197 (211)
T ss_pred             CCchhHHHHHHHHHH-HHHHHhh---ccCcceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHH
Confidence              2234455555333 2333333   344777888887776653322111110000000111135789999999999999


Q ss_pred             cCCCcccceE
Q psy12833        236 TNPLINGEVI  245 (254)
Q Consensus       236 ~~~~~~G~~i  245 (254)
                      ..+.-.-|.|
T Consensus       198 E~~~h~rqRf  207 (211)
T COG2910         198 EKPQHIRQRF  207 (211)
T ss_pred             hcccccceee
Confidence            7543333433

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.79  E-value=6.3e-08  Score=75.94  Aligned_cols=80  Identities=25%  Similarity=0.349  Sum_probs=65.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++++++|+||+|++|+++++.|+++|++|++++|+.++++++.+++.  .......+|..+.+++.+.+.       +.
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~   98 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------GA   98 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------cC
Confidence            467999999999999999999999999999999999888888777653  234566778889888877775       67


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|++...
T Consensus        99 diVi~at~~  107 (194)
T cd01078          99 DVVFAAGAA  107 (194)
T ss_pred             CEEEECCCC
Confidence            988886553

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1221|consensus

Probab=98.76  E-value=2.2e-07  Score=80.71  Aligned_cols=206  Identities=16%  Similarity=0.130  Sum_probs=125.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC---CEEEEeeCCCch---hHHHHHHh---------------CCCceEEecCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG---GRVVLCDLPTSE---GESVAKEL---------------GPDVKFAPVDVT   60 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g---~~v~~~~r~~~~---~~~~~~~~---------------~~~~~~~~~Dls   60 (254)
                      ++||+++||||||++|+.+++.|.+.-   -++++.-|....   -+++.++.               -.++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            478999999999999999999988653   277777664321   12222111               256788888988


Q ss_pred             CHHHHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCC
Q psy12833         61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGL  140 (254)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  140 (254)
                      +++---+--+.- .....+|++||+|+...             -.+.++..+.+|.+|+.++.+.+.....-        
T Consensus        90 ~~~LGis~~D~~-~l~~eV~ivih~AAtvr-------------Fde~l~~al~iNt~Gt~~~l~lak~~~~l--------  147 (467)
T KOG1221|consen   90 EPDLGISESDLR-TLADEVNIVIHSAATVR-------------FDEPLDVALGINTRGTRNVLQLAKEMVKL--------  147 (467)
T ss_pred             CcccCCChHHHH-HHHhcCCEEEEeeeeec-------------cchhhhhhhhhhhHhHHHHHHHHHHhhhh--------
Confidence            764311111100 11127999999998642             33567788999999999999988876543        


Q ss_pred             CcEEEEEeccccccC--------CC--------------------------------CCccchhchHHHHHhHHHHHHHh
Q psy12833        141 RGVIINTASIAAYEG--------QS--------------------------------GQVAYSASKSGIVGMTLPMARDL  180 (254)
Q Consensus       141 ~~~ii~vss~~~~~~--------~~--------------------------------~~~~Y~~sK~a~~~~~~~la~e~  180 (254)
                       ..++.+|+......        ++                                .-..|.-+|+-.+++...-    
T Consensus       148 -~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~----  222 (467)
T KOG1221|consen  148 -KALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE----  222 (467)
T ss_pred             -heEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh----
Confidence             35777776554410        00                                1124666666555544332    


Q ss_pred             ccCCcEEEEEecCCccccccccchHHHHHHH---------Hh--------cCCCCCCCCCHHHHHHHHHHHh
Q psy12833        181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL---------AR--------SIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       181 ~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~---------~~--------~~~~~~~~~~~~~va~~~~~l~  235 (254)
                       ..++.+..++|.++.+...+..........         .+        ........+++|.++.+++...
T Consensus       223 -~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~  293 (467)
T KOG1221|consen  223 -AENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASA  293 (467)
T ss_pred             -ccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHH
Confidence             346788888888886655443322111000         00        0001145678999999988444

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.74  E-value=5.6e-08  Score=83.69  Aligned_cols=82  Identities=24%  Similarity=0.285  Sum_probs=62.9

Q ss_pred             CCCcEEEEeCC---------------CCh-HHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGG---------------ASG-LGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGa---------------s~g-iG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~   65 (254)
                      ++||++|||||               |+| +|.+++++|..+|++|++++++....      ..  .....+|+++.+++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~--~~~~~~~v~~~~~~  254 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------TP--PGVKSIKVSTAEEM  254 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------CC--CCcEEEEeccHHHH
Confidence            57899999999               566 99999999999999999988765421      11  12356899999888


Q ss_pred             -HHHHHHHHHHcCCCcEEEeCCccCCCccc
Q psy12833         66 -QKAVLLCKDSFGKLDVNVNCAGISCAFKI   94 (254)
Q Consensus        66 -~~~~~~~~~~~~~id~li~~ag~~~~~~~   94 (254)
                       ++++++.   ++++|++|+|||+....+.
T Consensus       255 ~~~~~~~~---~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       255 LEAALNEL---AKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             HHHHHHhh---cccCCEEEEcccccccccc
Confidence             5555443   4679999999998765543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.73  E-value=5.8e-08  Score=77.96  Aligned_cols=97  Identities=19%  Similarity=0.209  Sum_probs=62.4

Q ss_pred             EEeCCC-ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCC
Q psy12833          8 LVTGGA-SGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus         8 lItGas-~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a   86 (254)
                      .||+.| |+||++++++|+++|++|++++|+.....    ....++.++.++  +   ..++.+.+.+.++.+|++||||
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~----~~~~~v~~i~v~--s---~~~m~~~l~~~~~~~DivIh~A   89 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP----EPHPNLSIIEIE--N---VDDLLETLEPLVKDHDVLIHSM   89 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC----CCCCCeEEEEEe--c---HHHHHHHHHHHhcCCCEEEeCC
Confidence            455444 56999999999999999999987643111    001345666643  2   2333344444455799999999


Q ss_pred             ccCCCccccccCCCCcCCHHHHHHHHHHHhHHH
Q psy12833         87 GISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT  119 (254)
Q Consensus        87 g~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  119 (254)
                      |+....+...      .+.+++...+++|..-.
T Consensus        90 Avsd~~~~~~------~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         90 AVSDYTPVYM------TDLEEVSASDNLNEFLT  116 (229)
T ss_pred             ccCCceehhh------hhhhhhhhhhhhhhhhc
Confidence            9865333322      57788888888765443

>KOG1202|consensus

Probab=98.67  E-value=8.7e-08  Score=89.59  Aligned_cols=160  Identities=19%  Similarity=0.286  Sum_probs=126.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhH---HHHHHh---CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGE---SVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~---~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      |...|.++|+||-||.|.++++.|..+|++ +++++|+.-+.-   .+...+   +.++..--.|++..+..+.++++..
T Consensus      1765 ~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1765 CHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             cCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh
Confidence            345689999999999999999999999995 788888754321   222223   3444444457777777788877654


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                      + .+.+-.++|.|.+....-+++      .+++.++..-+-.+.++.++-+.....-..-        ..+|..||...-
T Consensus      1845 k-l~~vGGiFnLA~VLRD~LiEn------Qt~knFk~va~pK~~~Ti~LD~~sRe~C~~L--------dyFv~FSSvscG 1909 (2376)
T KOG1202|consen 1845 K-LGPVGGIFNLAAVLRDGLIEN------QTPKNFKDVAKPKYSGTINLDRVSREICPEL--------DYFVVFSSVSCG 1909 (2376)
T ss_pred             h-cccccchhhHHHHHHhhhhcc------cChhHHHhhhccceeeeeehhhhhhhhCccc--------ceEEEEEeeccc
Confidence            4 478899999998877766666      8999999999999999999988877766543        478889998888


Q ss_pred             cCCCCCccchhchHHHHHhHHH
Q psy12833        154 EGQSGQVAYSASKSGIVGMTLP  175 (254)
Q Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~  175 (254)
                      ++..++..|+.+..+++.++..
T Consensus      1910 RGN~GQtNYG~aNS~MERiceq 1931 (2376)
T KOG1202|consen 1910 RGNAGQTNYGLANSAMERICEQ 1931 (2376)
T ss_pred             CCCCcccccchhhHHHHHHHHH
Confidence            8888899999999999998865

>KOG1431|consensus

Probab=98.67  E-value=3.2e-07  Score=71.49  Aligned_cols=186  Identities=18%  Similarity=0.149  Sum_probs=112.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC---EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG---RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++++|||++|=.|+||.+.+.++|.   +.++.++                  -.|||++.++.+++++..     ++..
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------kd~DLt~~a~t~~lF~~e-----kPth   58 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------KDADLTNLADTRALFESE-----KPTH   58 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------ccccccchHHHHHHHhcc-----CCce
Confidence            6899999999999999999998876   3333333                  248999999999999977     7888


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-------  154 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-------  154 (254)
                      +||.|+-.+.- +.+..    -+.+-+...+.+|    -+.+..+..+-.          .++++..|.+-+-       
T Consensus        59 VIhlAAmVGGl-f~N~~----ynldF~r~Nl~in----dNVlhsa~e~gv----------~K~vsclStCIfPdkt~yPI  119 (315)
T KOG1431|consen   59 VIHLAAMVGGL-FHNNT----YNLDFIRKNLQIN----DNVLHSAHEHGV----------KKVVSCLSTCIFPDKTSYPI  119 (315)
T ss_pred             eeehHhhhcch-hhcCC----CchHHHhhcceec----hhHHHHHHHhch----------hhhhhhcceeecCCCCCCCC
Confidence            99988753221 11110    2344444443333    333333333322          2344444444331       


Q ss_pred             ---------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc------ccchHHHHHH---------
Q psy12833        155 ---------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL------SMLNEKVRNF---------  210 (254)
Q Consensus       155 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~------~~~~~~~~~~---------  210 (254)
                               |-|....|+-+|.-+.-..+.++.++.   -...++.|-.+..|--      .-..+.....         
T Consensus       120 dEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg---~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gt  196 (315)
T KOG1431|consen  120 DETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG---RDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGT  196 (315)
T ss_pred             CHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC---CceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCC
Confidence                     123556899999766666677777654   4555566655544321      1111211111         


Q ss_pred             -----HHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        211 -----LARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       211 -----~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                           +....|. +.+++.+|+|+.++|++.
T Consensus       197 d~~~VwGsG~Pl-RqFiys~DLA~l~i~vlr  226 (315)
T KOG1431|consen  197 DELTVWGSGSPL-RQFIYSDDLADLFIWVLR  226 (315)
T ss_pred             ceEEEecCCChH-HHHhhHhHHHHHHHHHHH
Confidence                 1112344 678899999999999996

>KOG1203|consensus

Probab=98.67  E-value=2.7e-07  Score=78.94  Aligned_cols=211  Identities=17%  Similarity=0.099  Sum_probs=120.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH-Hh-CCCceEEecCCCCHHH-HHHHHHHHHHHcC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK-EL-GPDVKFAPVDVTSEED-VQKAVLLCKDSFG   77 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dls~~~~-~~~~~~~~~~~~~   77 (254)
                      |++-.+|+|+||||++|+-+++.|.++|+.|...-|+.++.+++.. .. .....-+..|.....+ ...+.+.+..   
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~---  152 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK---  152 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccc---
Confidence            3456789999999999999999999999999999999888777755 11 1223334444433332 2233332211   


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ...+++.|+|......  +           ..-...+-+.+..+++.+....-          -.+++++||+.+....+
T Consensus       153 ~~~~v~~~~ggrp~~e--d-----------~~~p~~VD~~g~knlvdA~~~aG----------vk~~vlv~si~~~~~~~  209 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEEE--D-----------IVTPEKVDYEGTKNLVDACKKAG----------VKRVVLVGSIGGTKFNQ  209 (411)
T ss_pred             cceeEEecccCCCCcc--c-----------CCCcceecHHHHHHHHHHHHHhC----------CceEEEEEeecCcccCC
Confidence            3566777776432221  1           11112334456666666663322          35799999988776654


Q ss_pred             CCccchhchHHHHH-hHHHHHHHhccCCcEEEEEecCCccccccccchH--HHHHHHHhcCCCCCC--CCCHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVG-MTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSIPAPQR--LGHPDEFAQLVQ  232 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~-~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~va~~~~  232 (254)
                      ....+..  .+... .-+...+++...|+....|.||.+..+.......  ...+.... . . .+  .+.=.++|+.++
T Consensus       210 ~~~~~~~--~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~i~r~~vael~~  284 (411)
T KOG1203|consen  210 PPNILLL--NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLT-V-D-GGAYSISRLDVAELVA  284 (411)
T ss_pred             Cchhhhh--hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecccCcccccc-c-c-ccceeeehhhHHHHHH
Confidence            4333332  22211 2234555666789999999999886653321110  00000000 0 0 22  445567777777


Q ss_pred             HHhcCCCccc
Q psy12833        233 SIITNPLING  242 (254)
Q Consensus       233 ~l~~~~~~~G  242 (254)
                      .++..+..++
T Consensus       285 ~all~~~~~~  294 (411)
T KOG1203|consen  285 KALLNEAATF  294 (411)
T ss_pred             HHHhhhhhcc
Confidence            7776554555

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.62  E-value=3.3e-07  Score=78.23  Aligned_cols=77  Identities=22%  Similarity=0.383  Sum_probs=69.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +.+||.|+ |++|+.++..|+++| .+|++.+|+.++++++......++.+.++|..|.+++.++++       ..|++|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~-------~~d~VI   73 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIK-------DFDLVI   73 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHh-------cCCEEE
Confidence            47999999 999999999999999 899999999999999888777799999999999999988888       559999


Q ss_pred             eCCccC
Q psy12833         84 NCAGIS   89 (254)
Q Consensus        84 ~~ag~~   89 (254)
                      +++...
T Consensus        74 n~~p~~   79 (389)
T COG1748          74 NAAPPF   79 (389)
T ss_pred             EeCCch
Confidence            998754

>PRK09620 hypothetical protein; Provisional

Probab=98.51  E-value=2.1e-07  Score=74.56  Aligned_cols=85  Identities=19%  Similarity=0.167  Sum_probs=52.6

Q ss_pred             CCCcEEEEeCCC----------------ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGGA----------------SGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGas----------------~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~   65 (254)
                      |+||++|||+|.                |.+|.++|++|.++|++|+++++.......... .+.++..+..|.    ++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~-~~~~~~~V~s~~----d~   75 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN-NQLELHPFEGII----DL   75 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC-CceeEEEEecHH----HH
Confidence            589999999886                999999999999999999988764321111000 011223333322    22


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCc
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAF   92 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~   92 (254)
                      .+.+.++.+. .++|++||+|+++...
T Consensus        76 ~~~l~~~~~~-~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         76 QDKMKSIITH-EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHhcc-cCCCEEEECcccccee
Confidence            2233332221 2689999999985443

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.46  E-value=6.4e-07  Score=65.97  Aligned_cols=75  Identities=23%  Similarity=0.444  Sum_probs=58.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhHHHHHHhC-CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKELG-PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++++++|.|+ ||.|++++..|.+.|++ |+++.|+.++++++.++++ ..+.++..  ++   +.+.+.       +.
T Consensus        10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~--~~---~~~~~~-------~~   76 (135)
T PF01488_consen   10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL--ED---LEEALQ-------EA   76 (135)
T ss_dssp             GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG--GG---HCHHHH-------TE
T ss_pred             cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH--HH---HHHHHh-------hC
Confidence            57899999998 99999999999999986 9999999999999998883 33444444  22   223333       68


Q ss_pred             cEEEeCCccC
Q psy12833         80 DVNVNCAGIS   89 (254)
Q Consensus        80 d~li~~ag~~   89 (254)
                      |++|++.+..
T Consensus        77 DivI~aT~~~   86 (135)
T PF01488_consen   77 DIVINATPSG   86 (135)
T ss_dssp             SEEEE-SSTT
T ss_pred             CeEEEecCCC
Confidence            9999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.42  E-value=9.2e-07  Score=76.82  Aligned_cols=75  Identities=32%  Similarity=0.462  Sum_probs=61.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHH-hCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          7 GLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKE-LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|+.++++++.++ .+.++.++++|+.|.+++.++++       +.|++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEEE
Confidence            689999 9999999999998874  899999999999998887 47889999999999999888887       669999


Q ss_pred             eCCccC
Q psy12833         84 NCAGIS   89 (254)
Q Consensus        84 ~~ag~~   89 (254)
                      ||+|..
T Consensus        73 n~~gp~   78 (386)
T PF03435_consen   73 NCAGPF   78 (386)
T ss_dssp             E-SSGG
T ss_pred             ECCccc
Confidence            999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00106 malate dehydrogenase

Probab=98.35  E-value=1e-05  Score=68.20  Aligned_cols=150  Identities=11%  Similarity=0.071  Sum_probs=93.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhC-CCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELG-PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      .+++.|||++|.+|..++..|+.++.  +++++++++...+.+  ++. ........++++.+++.+.++       ..|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~--Dl~~~~~~~~i~~~~~~~d~~~~l~-------~aD   88 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAA--DVSHINTPAQVRGFLGDDQLGDALK-------GAD   88 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEc--hhhhCCcCceEEEEeCCCCHHHHcC-------CCC
Confidence            46899999999999999999997664  799999977322111  110 011112223333333444444       789


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc----c---
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA----Y---  153 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~----~---  153 (254)
                      ++|+.||....            +...+.+.+..|+.....+.+.+    .+..+     ++.++++|-...    .   
T Consensus        89 iVVitAG~~~~------------~g~~R~dll~~N~~i~~~i~~~i----~~~~p-----~aivivvSNPvD~~~~i~t~  147 (323)
T PLN00106         89 LVIIPAGVPRK------------PGMTRDDLFNINAGIVKTLCEAV----AKHCP-----NALVNIISNPVNSTVPIAAE  147 (323)
T ss_pred             EEEEeCCCCCC------------CCCCHHHHHHHHHHHHHHHHHHH----HHHCC-----CeEEEEeCCCccccHHHHHH
Confidence            99999997532            12335666777776655554444    44331     345555554442    1   


Q ss_pred             -----cCCCCCccchhchHHHHHhHHHHHHHhccC
Q psy12833        154 -----EGQSGQVAYSASKSGIVGMTLPMARDLAGA  183 (254)
Q Consensus       154 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  183 (254)
                           .++|+...|+.++.-...|-..+++++.-.
T Consensus       148 ~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        148 VLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             HHHHcCCCCcceEEEEecchHHHHHHHHHHHhCCC
Confidence                 345667789999876677888899888543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.30  E-value=3.7e-06  Score=74.52  Aligned_cols=77  Identities=22%  Similarity=0.293  Sum_probs=58.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |++|+++|+|+++ +|.++++.|+++|++|++++++. +..++..+++ ...+.++..|..+            +..+++
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~~   69 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE------------EFLEGV   69 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch------------hHhhcC
Confidence            6789999999877 99999999999999999999975 3344433444 2256778888775            123478


Q ss_pred             cEEEeCCccCCC
Q psy12833         80 DVNVNCAGISCA   91 (254)
Q Consensus        80 d~li~~ag~~~~   91 (254)
                      |++|+++|....
T Consensus        70 d~vv~~~g~~~~   81 (450)
T PRK14106         70 DLVVVSPGVPLD   81 (450)
T ss_pred             CEEEECCCCCCC
Confidence            999999997543

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.27  E-value=4.9e-06  Score=70.20  Aligned_cols=72  Identities=18%  Similarity=0.298  Sum_probs=54.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-C-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVRE-G-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++|+++||||+|.||+.++++|+++ | .++++++|+.+++.++.+++.      ..|+.   ++.       +.+...
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~------~~~i~---~l~-------~~l~~a  216 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG------GGKIL---SLE-------EALPEA  216 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc------cccHH---hHH-------HHHccC
Confidence            57899999999999999999999864 5 589999999888888776642      12222   222       233478


Q ss_pred             cEEEeCCccC
Q psy12833         80 DVNVNCAGIS   89 (254)
Q Consensus        80 d~li~~ag~~   89 (254)
                      |++|++++..
T Consensus       217 DiVv~~ts~~  226 (340)
T PRK14982        217 DIVVWVASMP  226 (340)
T ss_pred             CEEEECCcCC
Confidence            9999999864

>KOG4039|consensus

Probab=98.20  E-value=5e-06  Score=62.52  Aligned_cols=159  Identities=12%  Similarity=0.060  Sum_probs=98.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |+++.++|.||||-.|+.+.+++.+.+-  +|+++.|+..--.    +..+++.-...|.+..++......       ++
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~----at~k~v~q~~vDf~Kl~~~a~~~q-------g~   84 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP----ATDKVVAQVEVDFSKLSQLATNEQ-------GP   84 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc----cccceeeeEEechHHHHHHHhhhc-------CC
Confidence            5678899999999999999999999884  7999999742211    113455566777766554433333       79


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |+.+++-|......-.+             ..+.+.---.+.+++++..    ..      -..|+.+||..+....  .
T Consensus        85 dV~FcaLgTTRgkaGad-------------gfykvDhDyvl~~A~~AKe----~G------ck~fvLvSS~GAd~sS--r  139 (238)
T KOG4039|consen   85 DVLFCALGTTRGKAGAD-------------GFYKVDHDYVLQLAQAAKE----KG------CKTFVLVSSAGADPSS--R  139 (238)
T ss_pred             ceEEEeecccccccccC-------------ceEeechHHHHHHHHHHHh----CC------CeEEEEEeccCCCccc--c
Confidence            99999988653321111             1111111112222332222    11      3579999998776654  3


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM  202 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~  202 (254)
                      ..|--.|.-++.=+-.|-      -=++..+.||++..+....
T Consensus       140 FlY~k~KGEvE~~v~eL~------F~~~~i~RPG~ll~~R~es  176 (238)
T KOG4039|consen  140 FLYMKMKGEVERDVIELD------FKHIIILRPGPLLGERTES  176 (238)
T ss_pred             eeeeeccchhhhhhhhcc------ccEEEEecCcceecccccc
Confidence            468888886654443321      1277889999997765443

>KOG2733|consensus

Probab=98.14  E-value=6.6e-06  Score=68.37  Aligned_cols=77  Identities=22%  Similarity=0.269  Sum_probs=66.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHH----cCCEEEEeeCCCchhHHHHHHhC-------CCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVR----EGGRVVLCDLPTSEGESVAKELG-------PDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~----~g~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      -++|-||||.-|.-+++++.+    +|..+-+.+|+++++++..++.+       .....+.||.+|+++++++.+    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            489999999999999999998    78899999999999999888762       122378899999999999998    


Q ss_pred             HcCCCcEEEeCCccC
Q psy12833         75 SFGKLDVNVNCAGIS   89 (254)
Q Consensus        75 ~~~~id~li~~ag~~   89 (254)
                         +..+++||+|..
T Consensus        83 ---~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 ---QARVIVNCVGPY   94 (423)
T ss_pred             ---hhEEEEeccccc
Confidence               458999999953

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.09  E-value=2.2e-05  Score=60.76  Aligned_cols=81  Identities=32%  Similarity=0.358  Sum_probs=50.7

Q ss_pred             CCCcEEEEeCCC----------------ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGGA----------------SGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGas----------------~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~   65 (254)
                      |+||++|||+|.                |.+|.++|+++..+|++|+++..... ...     ...+..+++  .+.+++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~-----p~~~~~i~v--~sa~em   72 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP-----PPGVKVIRV--ESAEEM   72 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------TTEEEEE---SSHHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc-----cccceEEEe--cchhhh
Confidence            689999999875                89999999999999999999887642 111     124444444  455555


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCcc
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAFK   93 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~   93 (254)
                      .+.+.+.   +..-|++|++|+++...+
T Consensus        73 ~~~~~~~---~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   73 LEAVKEL---LPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             HHHHHHH---GGGGSEEEE-SB--SEEE
T ss_pred             hhhhccc---cCcceeEEEecchhheee
Confidence            5555544   344599999999875443

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG2774|consensus

Probab=98.07  E-value=1.2e-05  Score=63.18  Aligned_cols=211  Identities=15%  Similarity=0.207  Sum_probs=125.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHc-CC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVRE-GG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ..++||||+-|-+|..+|+.|-.+ |. .|++.+...+....     -..--++-.|+-|..++++.+-.-     ++|-
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-----~~~GPyIy~DILD~K~L~eIVVn~-----RIdW  113 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-----TDVGPYIYLDILDQKSLEEIVVNK-----RIDW  113 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-----cccCCchhhhhhccccHHHhhccc-----ccce
Confidence            468999999999999999988754 65 57666553332111     122346678999988888776533     8999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-----
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-----  156 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-----  156 (254)
                      +||-.+....           ...+...-..++|+.|..++++.+..+           +-++..=|.+.++.|.     
T Consensus       114 L~HfSALLSA-----------vGE~NVpLA~~VNI~GvHNil~vAa~~-----------kL~iFVPSTIGAFGPtSPRNP  171 (366)
T KOG2774|consen  114 LVHFSALLSA-----------VGETNVPLALQVNIRGVHNILQVAAKH-----------KLKVFVPSTIGAFGPTSPRNP  171 (366)
T ss_pred             eeeHHHHHHH-----------hcccCCceeeeecchhhhHHHHHHHHc-----------CeeEeecccccccCCCCCCCC
Confidence            9986653221           122223344688999999998877654           2334444555555542     


Q ss_pred             -------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEE-ecCCccccc----cccchHHH-HHHHHh------cCCC
Q psy12833        157 -------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTI-APGLFDTPL----LSMLNEKV-RNFLAR------SIPA  217 (254)
Q Consensus       157 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v-~Pg~~~t~~----~~~~~~~~-~~~~~~------~~~~  217 (254)
                             .+...|+.||.-.+.+-..+...   +|+.+.++ .||.+..+-    ...+.... .+...+      ..|.
T Consensus       172 TPdltIQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpd  248 (366)
T KOG2774|consen  172 TPDLTIQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPD  248 (366)
T ss_pred             CCCeeeecCceeechhHHHHHHHHHHHHhh---cCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCC
Confidence                   25679999999877776665443   46666555 466664311    11111111 122211      0111


Q ss_pred             -CCCCCCHHHHHHHHHHHhcC--CCcccceEEecC
Q psy12833        218 -PQRLGHPDEFAQLVQSIITN--PLINGEVIRIDG  249 (254)
Q Consensus       218 -~~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~g  249 (254)
                       --.+++.+|+-..++.++.+  ..+.-.++++.|
T Consensus       249 trlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~  283 (366)
T KOG2774|consen  249 TRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTG  283 (366)
T ss_pred             ccCceeehHHHHHHHHHHHhCCHHHhhhheeeece
Confidence             02245778887777777753  345556666653

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.06  E-value=2.2e-05  Score=66.43  Aligned_cols=118  Identities=18%  Similarity=0.164  Sum_probs=65.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC-------CEEEEeeCCCch--hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREG-------GRVVLCDLPTSE--GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g-------~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      -+++||||+|.+|.+++..|...+       .+|++.+++...  ++...-++.+-......|+....++.       +.
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~-------~~   75 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPE-------EA   75 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHH-------HH
Confidence            469999999999999999998854       589999996532  21110011000001111222222222       22


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      +...|++||+||......         .+   -.+.++.|+.    +.+...+.+.+...    +.+.++++|.
T Consensus        76 l~~aDiVI~tAG~~~~~~---------~~---R~~l~~~N~~----i~~~i~~~i~~~~~----~~~iiivvsN  129 (325)
T cd01336          76 FKDVDVAILVGAMPRKEG---------ME---RKDLLKANVK----IFKEQGEALDKYAK----KNVKVLVVGN  129 (325)
T ss_pred             hCCCCEEEEeCCcCCCCC---------CC---HHHHHHHHHH----HHHHHHHHHHHhCC----CCeEEEEecC
Confidence            337999999999753211         22   2445555553    44555555555420    1567777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.05  E-value=0.00016  Score=60.86  Aligned_cols=147  Identities=16%  Similarity=0.137  Sum_probs=90.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHhC-CCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKELG-PDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++.+++.|||+.|.+|..++..|+.++  .++++++++....+.+  ++. ....+...+.+|+.+..+.++       .
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~--Dl~~~~~~~~v~~~td~~~~~~~l~-------g   76 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA--DLSHIDTPAKVTGYADGELWEKALR-------G   76 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc--chhhcCcCceEEEecCCCchHHHhC-------C
Confidence            456799999999999999999998655  5899999943222211  110 111223345555444333444       7


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc-------
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA-------  151 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~-------  151 (254)
                      .|++|+++|....            +.+++.+.+..|+.....+.+.    |.+..      ..++++++|-.       
T Consensus        77 aDvVVitaG~~~~------------~~~tR~dll~~N~~i~~~i~~~----i~~~~------~~~iviv~SNPvdv~~~~  134 (321)
T PTZ00325         77 ADLVLICAGVPRK------------PGMTRDDLFNTNAPIVRDLVAA----VASSA------PKAIVGIVSNPVNSTVPI  134 (321)
T ss_pred             CCEEEECCCCCCC------------CCCCHHHHHHHHHHHHHHHHHH----HHHHC------CCeEEEEecCcHHHHHHH
Confidence            8999999996432            1234566677777666555544    44443      35677776632       


Q ss_pred             ------cccCCCCCccchhchHHHHH--hHHHHHHHhc
Q psy12833        152 ------AYEGQSGQVAYSASKSGIVG--MTLPMARDLA  181 (254)
Q Consensus       152 ------~~~~~~~~~~Y~~sK~a~~~--~~~~la~e~~  181 (254)
                            ...++|+...|+.+-  |+.  |-..+++.+.
T Consensus       135 ~~~~~~~~sg~p~~~viG~g~--LDs~R~r~~la~~l~  170 (321)
T PTZ00325        135 AAETLKKAGVYDPRKLFGVTT--LDVVRARKFVAEALG  170 (321)
T ss_pred             HHhhhhhccCCChhheeechh--HHHHHHHHHHHHHhC
Confidence                  123456666788873  654  6667777774

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=98.01  E-value=3e-05  Score=58.32  Aligned_cols=74  Identities=18%  Similarity=0.336  Sum_probs=55.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++++++|+|+ |++|+++++.|.+.| .+|++++|+.++.++..++++...  +..+.++.++.          ..+.|+
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~Dv   84 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--IAIAYLDLEEL----------LAEADL   84 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--cceeecchhhc----------cccCCE
Confidence            5789999998 899999999999996 789999999888888777654321  22344443322          247899


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|++....
T Consensus        85 vi~~~~~~   92 (155)
T cd01065          85 IINTTPVG   92 (155)
T ss_pred             EEeCcCCC
Confidence            99998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.95  E-value=0.00011  Score=61.52  Aligned_cols=79  Identities=24%  Similarity=0.353  Sum_probs=55.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|++++|+|+++++|.++++.+...|++|++++++.++.+.+ .+++..   ..+|..+.+..+.+.+....  .++|++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~~~--~~~d~v  217 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGAD---AVFNYRAEDLADRILAATAG--QGVDVI  217 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---EEEeCCCcCHHHHHHHHcCC--CceEEE
Confidence            578999999999999999999999999999999987766555 344322   12344444444443332211  369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      ++|++
T Consensus       218 i~~~~  222 (325)
T cd08253         218 IEVLA  222 (325)
T ss_pred             EECCc
Confidence            99876

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.90  E-value=5.4e-05  Score=62.49  Aligned_cols=74  Identities=14%  Similarity=0.287  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...-.....++   ++   .      .....|++
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~---~------~~~~~Div  182 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM---DE---L------PLHRVDLI  182 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech---hh---h------cccCccEE
Confidence            4789999999 6999999999999999999999998888888776532111111111   11   0      12368999


Q ss_pred             EeCCccC
Q psy12833         83 VNCAGIS   89 (254)
Q Consensus        83 i~~ag~~   89 (254)
                      |++.+..
T Consensus       183 Inatp~g  189 (270)
T TIGR00507       183 INATSAG  189 (270)
T ss_pred             EECCCCC
Confidence            9998764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.89  E-value=4.6e-05  Score=63.19  Aligned_cols=75  Identities=23%  Similarity=0.421  Sum_probs=54.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|+++|+|+ ||+|++++..|.+.| .+|++++|+.++.+++.+++..... +..++    +.       .+.....|
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~~~----~~-------~~~~~~~D  187 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK-AELDL----EL-------QEELADFD  187 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-eeecc----cc-------hhccccCC
Confidence            46789999997 899999999999999 6899999999888888776642210 11111    01       11223689


Q ss_pred             EEEeCCccC
Q psy12833         81 VNVNCAGIS   89 (254)
Q Consensus        81 ~li~~ag~~   89 (254)
                      ++|++....
T Consensus       188 ivInaTp~g  196 (278)
T PRK00258        188 LIINATSAG  196 (278)
T ss_pred             EEEECCcCC
Confidence            999998654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.85  E-value=0.00041  Score=72.49  Aligned_cols=179  Identities=14%  Similarity=0.149  Sum_probs=115.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.++.++|++.+++++.+++..|.++|+.|.++.... ........+...+..+.+.-.|..++..+++.+....+.++.
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 1831 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPW-VVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDG 1831 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccc-cccccccccccccccccccccchHHHHHHHHhhhccccccce
Confidence            3467888888889999999999999999988763221 111111111223334455555678888898888887788999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +||..+......  +.     .+...+...-...+...|.+.|.+.+.+....      .+.++.++...+..+......
T Consensus      1832 ~i~l~~~~~~~~--~~-----~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~------~~~~~~vsr~~G~~g~~~~~~ 1898 (2582)
T TIGR02813      1832 FIHLQPQHKSVA--DK-----VDAIELPEAAKQSLMLAFLFAKLLNVKLATNA------RASFVTVSRIDGGFGYSNGDA 1898 (2582)
T ss_pred             EEEecccccccc--cc-----ccccccchhhHHHHHHHHHHHHhhchhhccCC------CeEEEEEEecCCccccCCccc
Confidence            999877542100  00     00000011111233446777777666555433      578999999887776533222


Q ss_pred             c--------hhchHHHHHhHHHHHHHhccCCcEEEEEecCC
Q psy12833        162 Y--------SASKSGIVGMTLPMARDLAGAGIRVNTIAPGL  194 (254)
Q Consensus       162 Y--------~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~  194 (254)
                      .        ....+++.+|+|+++.|+....+|...+.|..
T Consensus      1899 ~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1899 DSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             cccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence            1        34588999999999999988788888888753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.79  E-value=0.00011  Score=61.12  Aligned_cols=78  Identities=15%  Similarity=0.121  Sum_probs=55.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++.++++........+  ..+++.       ......|
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~--~~~~~~-------~~~~~~D  192 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE--GDSGGL-------AIEKAAE  192 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc--chhhhh-------hcccCCC
Confidence            36889999987 9999999999999997 79999999999998887764322211111  112221       1223689


Q ss_pred             EEEeCCccC
Q psy12833         81 VNVNCAGIS   89 (254)
Q Consensus        81 ~li~~ag~~   89 (254)
                      ++||+....
T Consensus       193 iVInaTp~g  201 (282)
T TIGR01809       193 VLVSTVPAD  201 (282)
T ss_pred             EEEECCCCC
Confidence            999997653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.77  E-value=9.7e-05  Score=66.65  Aligned_cols=47  Identities=30%  Similarity=0.460  Sum_probs=41.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG   49 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   49 (254)
                      +++|+++|+|+ ||+|++++..|+++|++|++++|+.++.+++.++++
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            45799999999 699999999999999999999999888888877663

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.76  E-value=9e-05  Score=61.29  Aligned_cols=77  Identities=21%  Similarity=0.340  Sum_probs=67.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ...+|-||+|-.|.-++++|+++|.+-.+.+||..++..+..+++.+...+++..  ++.++++++       +.++|+|
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~--p~~~~~~~~-------~~~VVln   77 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGV--PAALEAMAS-------RTQVVLN   77 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCC--HHHHHHHHh-------cceEEEe
Confidence            5689999999999999999999999999999999999999999988887777765  666666665       7899999


Q ss_pred             CCccCC
Q psy12833         85 CAGISC   90 (254)
Q Consensus        85 ~ag~~~   90 (254)
                      |+|...
T Consensus        78 cvGPyt   83 (382)
T COG3268          78 CVGPYT   83 (382)
T ss_pred             cccccc
Confidence            999644

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.72  E-value=0.00017  Score=62.92  Aligned_cols=74  Identities=8%  Similarity=0.189  Sum_probs=55.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++++++|.|+ ||+|+.++..|+++|+ +++++.|+.++.+.+.++++. ...+     ..+++.+.+       ...|
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-~~~~-----~~~~l~~~l-------~~aD  244 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-ASAH-----YLSELPQLI-------KKAD  244 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-CeEe-----cHHHHHHHh-------ccCC
Confidence            46899999999 9999999999999996 799999999988888887642 1111     123333333       3689


Q ss_pred             EEEeCCccC
Q psy12833         81 VNVNCAGIS   89 (254)
Q Consensus        81 ~li~~ag~~   89 (254)
                      ++|++.+..
T Consensus       245 iVI~aT~a~  253 (414)
T PRK13940        245 IIIAAVNVL  253 (414)
T ss_pred             EEEECcCCC
Confidence            999998753

>PRK06849 hypothetical protein; Provisional

Probab=97.72  E-value=0.00046  Score=60.08  Aligned_cols=85  Identities=14%  Similarity=0.059  Sum_probs=57.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |.+.++|||||++.++|..+++.|.+.|++|++++.+....... ...-+....++..-.|.+...+.+.++.++. ++|
T Consensus         1 ~~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~-s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id   78 (389)
T PRK06849          1 MNTKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRF-SRAVDGFYTIPSPRWDPDAYIQALLSIVQRE-NID   78 (389)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHH-HHhhhheEEeCCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            56779999999999999999999999999999998876443321 1111223333223345554444444555543 589


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|....
T Consensus        79 ~vIP~~e   85 (389)
T PRK06849         79 LLIPTCE   85 (389)
T ss_pred             EEEECCh
Confidence            9988765

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.69  E-value=0.00022  Score=59.19  Aligned_cols=45  Identities=27%  Similarity=0.382  Sum_probs=40.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL   48 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   48 (254)
                      ++|+++|.|+ ||-|++++..|++.|+ +++++.|+.++.+++.+.+
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            5789999998 9999999999999997 7899999999988888765

>cd00704 MDH Malate dehydrogenase

Probab=97.63  E-value=0.0011  Score=55.99  Aligned_cols=114  Identities=13%  Similarity=0.096  Sum_probs=69.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHH--H--HHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-------RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV--Q--KAVLLCKD   74 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~--~--~~~~~~~~   74 (254)
                      ++.||||+|.+|..++..|+..|.       ++++.+++...         ........|++|....  .  ..-....+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~   72 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---------KALEGVVMELQDCAFPLLKGVVITTDPEE   72 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---------CccceeeeehhhhcccccCCcEEecChHH
Confidence            689999999999999999997663       58999997621         1233455566554200  0  00012233


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-cCCCCCCCcEEEEEec
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHEN-KLNEDGLRGVIINTAS  149 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~~ii~vss  149 (254)
                      .+...|++|+.||.....            .++-.+.+..|.    .+.+.+.+.+.+. .+     ++.++++|-
T Consensus        73 ~~~~aDiVVitAG~~~~~------------g~tR~dll~~N~----~i~~~i~~~i~~~~~~-----~~iiivvsN  127 (323)
T cd00704          73 AFKDVDVAILVGAFPRKP------------GMERADLLRKNA----KIFKEQGEALNKVAKP-----TVKVLVVGN  127 (323)
T ss_pred             HhCCCCEEEEeCCCCCCc------------CCcHHHHHHHhH----HHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence            445799999999975321            122344455554    4456666666655 21     567777764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.62  E-value=0.0006  Score=58.83  Aligned_cols=75  Identities=16%  Similarity=0.207  Sum_probs=56.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .+++++|.|+ |.+|+..++.+.+.|++|++++|+.++++.+...++..   +..+..+++.+.+.+.       ..|++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~---v~~~~~~~~~l~~~l~-------~aDvV  234 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGR---IHTRYSNAYEIEDAVK-------RADLL  234 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCce---eEeccCCHHHHHHHHc-------cCCEE
Confidence            4567999988 79999999999999999999999988877766655432   2334556665544443       67999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |++++.
T Consensus       235 I~a~~~  240 (370)
T TIGR00518       235 IGAVLI  240 (370)
T ss_pred             EEcccc
Confidence            998865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.61  E-value=0.00021  Score=59.00  Aligned_cols=76  Identities=17%  Similarity=0.284  Sum_probs=56.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEE-ecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFA-PVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~-~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +|++++|.|| ||.+++++..|++.|+ +++++.|+.++++++.+.+......+ ..+..+.+...           ..|
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----------~~d  192 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----------EAD  192 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----------ccC
Confidence            4789999998 8999999999999995 79999999999999988774333222 22332222111           479


Q ss_pred             EEEeCCccCC
Q psy12833         81 VNVNCAGISC   90 (254)
Q Consensus        81 ~li~~ag~~~   90 (254)
                      ++||+....-
T Consensus       193 liINaTp~Gm  202 (283)
T COG0169         193 LLINATPVGM  202 (283)
T ss_pred             EEEECCCCCC
Confidence            9999987643

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.60  E-value=0.00055  Score=57.90  Aligned_cols=114  Identities=16%  Similarity=0.122  Sum_probs=70.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHH-H-HH--HHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-------RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQ-K-AV--LLCKD   74 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~-~-~~--~~~~~   74 (254)
                      ++.|+|++|.+|.+++..|+..+.       .+++.++++..         ........|++|..... . ..  ....+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~---------~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~   71 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM---------KVLEGVVMELMDCAFPLLDGVVPTHDPAV   71 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc---------cccceeEeehhcccchhcCceeccCChHH
Confidence            478999999999999999987554       58999986543         12344566666665211 0 00  01233


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-cCCCCCCCcEEEEEec
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHEN-KLNEDGLRGVIINTAS  149 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~~ii~vss  149 (254)
                      .+...|++|+.||....            +.+++.+.+..|+    .+.+...+.+.+. .+     ++.++++|-
T Consensus        72 ~~~~aDiVVitAG~~~~------------~~~tr~~ll~~N~----~i~k~i~~~i~~~~~~-----~~iiivvsN  126 (324)
T TIGR01758        72 AFTDVDVAILVGAFPRK------------EGMERRDLLSKNV----KIFKEQGRALDKLAKK-----DCKVLVVGN  126 (324)
T ss_pred             HhCCCCEEEEcCCCCCC------------CCCcHHHHHHHHH----HHHHHHHHHHHhhCCC-----CeEEEEeCC
Confidence            44579999999997432            1123455555555    4455556666654 21     577777775

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.57  E-value=0.002  Score=54.22  Aligned_cols=110  Identities=19%  Similarity=0.247  Sum_probs=69.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHhC-------CCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKELG-------PDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +++.|.|+ |++|++++..|+.+|  .++++++++.+.++....++.       ...... .  .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            36889997 899999999999999  589999999888776666551       111122 1  22221           


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      ....|++|+++|......         ++   -.+.++.|.    .+.+...+.+.+..+     .+.++++|-.
T Consensus        66 l~~aDIVIitag~~~~~g---------~~---R~dll~~N~----~i~~~~~~~i~~~~~-----~~~vivvsNP  119 (306)
T cd05291          66 CKDADIVVITAGAPQKPG---------ET---RLDLLEKNA----KIMKSIVPKIKASGF-----DGIFLVASNP  119 (306)
T ss_pred             hCCCCEEEEccCCCCCCC---------CC---HHHHHHHHH----HHHHHHHHHHHHhCC-----CeEEEEecCh
Confidence            137899999998743211         22   233344444    345555555555432     5778877753

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.57  E-value=0.00033  Score=62.13  Aligned_cols=80  Identities=21%  Similarity=0.180  Sum_probs=53.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++||+++|||+++ +|.++++.|+++|++|++.+++........+++ ...+.+...+  +...+   ..      .++|
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~---~~------~~~d   70 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLEL---LD------EDFD   70 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHHH---hc------CcCC
Confidence            5789999999976 999999999999999999998664433332333 1233333322  11211   11      1489


Q ss_pred             EEEeCCccCCCcc
Q psy12833         81 VNVNCAGISCAFK   93 (254)
Q Consensus        81 ~li~~ag~~~~~~   93 (254)
                      ++|+++|+....+
T Consensus        71 ~vV~s~gi~~~~~   83 (447)
T PRK02472         71 LMVKNPGIPYTNP   83 (447)
T ss_pred             EEEECCCCCCCCH
Confidence            9999999865443

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.55  E-value=0.00077  Score=58.28  Aligned_cols=73  Identities=22%  Similarity=0.412  Sum_probs=57.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++++++||.|| |-+|.-++++|+++| ..|+++.|+.+++++++++++       .+....+++...+.       ..|
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-------~~~~~l~el~~~l~-------~~D  240 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-------AEAVALEELLEALA-------EAD  240 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-------CeeecHHHHHHhhh-------hCC
Confidence            57899999999 789999999999999 579999999999999999876       22223344444444       679


Q ss_pred             EEEeCCccC
Q psy12833         81 VNVNCAGIS   89 (254)
Q Consensus        81 ~li~~ag~~   89 (254)
                      ++|.+.+..
T Consensus       241 vVissTsa~  249 (414)
T COG0373         241 VVISSTSAP  249 (414)
T ss_pred             EEEEecCCC
Confidence            999887753

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.55  E-value=0.00038  Score=59.28  Aligned_cols=80  Identities=19%  Similarity=0.192  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.++||+||++++|.++++.+...|++|+.+.++.++.+.+.+.++... ++  |..+.++..+.+.+...  +++|++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~-vi--~~~~~~~~~~~i~~~~~--~gvd~v  225 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD-AF--NYKEEPDLDAALKRYFP--NGIDIY  225 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce-eE--EcCCcccHHHHHHHhCC--CCcEEE
Confidence            47899999999999999998877889999998988777666655465421 12  22222223333333221  379999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       226 ~d~~g  230 (338)
T cd08295         226 FDNVG  230 (338)
T ss_pred             EECCC
Confidence            98876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.55  E-value=0.00055  Score=57.83  Aligned_cols=79  Identities=30%  Similarity=0.356  Sum_probs=57.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+ .+.+..   ...|..+.+..+.+.+....  +++|++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~~  239 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGAD---YVIDYRKEDFVREVRELTGK--RGVDVV  239 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---eEEecCChHHHHHHHHHhCC--CCCcEE
Confidence            578999999999999999999999999999999887766554 333322   22466666655555443322  369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      ++++|
T Consensus       240 i~~~g  244 (342)
T cd08266         240 VEHVG  244 (342)
T ss_pred             EECCc
Confidence            99987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.54  E-value=0.00023  Score=59.16  Aligned_cols=46  Identities=22%  Similarity=0.320  Sum_probs=41.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELG   49 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   49 (254)
                      ++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.++++
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~  172 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELN  172 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence            5789999998 8899999999999998 79999999999888887763

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.53  E-value=0.00016  Score=56.84  Aligned_cols=46  Identities=22%  Similarity=0.372  Sum_probs=40.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL   48 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   48 (254)
                      ++||+++|+|.+ .+|+.+++.|.+.|++|++++++.+++++..+++
T Consensus        26 l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          26 LEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            578999999995 8999999999999999999999988777776654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.51  E-value=0.00058  Score=57.93  Aligned_cols=77  Identities=30%  Similarity=0.389  Sum_probs=54.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC--CCcE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG--KLDV   81 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--~id~   81 (254)
                      |.++||+||+||+|...++-..+.|++++++..+.++.+ ...+++...   ..|..+.+    +.+++.+..+  ++|+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~---vi~y~~~~----~~~~v~~~t~g~gvDv  214 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADH---VINYREED----FVEQVRELTGGKGVDV  214 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCE---EEcCCccc----HHHHHHHHcCCCCceE
Confidence            789999999999999999988888988777777666666 556654322   22233333    5555555443  5999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      ++...|.
T Consensus       215 v~D~vG~  221 (326)
T COG0604         215 VLDTVGG  221 (326)
T ss_pred             EEECCCH
Confidence            9988773

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.48  E-value=0.0016  Score=55.11  Aligned_cols=155  Identities=10%  Similarity=0.003  Sum_probs=93.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHH----HHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG-------RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQ----KAVLLC   72 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~----~~~~~~   72 (254)
                      -+++.|+|++|.+|..++..|+..|.       ++++.+.++..         .+......|+.+.....    .....-
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~---------~~a~g~a~Dl~~~~~~~~~~~~i~~~~   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQAL---------KALEGVAMELEDCAFPLLAEIVITDDP   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcc---------cccceeehhhhhccccccCceEEecCc
Confidence            46899999999999999999998875       79999985432         01112222222211000    000111


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      .+.+..-|++|.+||......         ++   -.+.+..|+    -+.+.+.+.+.+..+    +++.++++|--..
T Consensus        73 ~~~~~daDivvitaG~~~k~g---------~t---R~dll~~N~----~i~~~i~~~i~~~~~----~~~iiivvsNPvD  132 (322)
T cd01338          73 NVAFKDADWALLVGAKPRGPG---------ME---RADLLKANG----KIFTAQGKALNDVAS----RDVKVLVVGNPCN  132 (322)
T ss_pred             HHHhCCCCEEEEeCCCCCCCC---------Cc---HHHHHHHHH----HHHHHHHHHHHhhCC----CCeEEEEecCcHH
Confidence            223347899999999753211         22   233455554    445666666665431    1567777765331


Q ss_pred             c--------cC-CCCCccchhchHHHHHhHHHHHHHhcc--CCcEE
Q psy12833        153 Y--------EG-QSGQVAYSASKSGIVGMTLPMARDLAG--AGIRV  187 (254)
Q Consensus       153 ~--------~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~--~~i~v  187 (254)
                      .        .+ +|....|+.++.-...|...+++.+.-  ..++.
T Consensus       133 ~~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         133 TNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             HHHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence            1        22 666778999999999999999998854  34553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.48  E-value=0.00055  Score=58.67  Aligned_cols=80  Identities=19%  Similarity=0.186  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.++||+|+++++|..+++.+...|++|+.++++.++.+.+.++++... .+  |..+.++..+.+.+...  +++|++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~-vi--~~~~~~~~~~~i~~~~~--~gvD~v  232 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AF--NYKEEPDLDAALKRYFP--EGIDIY  232 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE-EE--ECCCcccHHHHHHHHCC--CCcEEE
Confidence            47899999999999999998888889999988888777666654565432 12  22222223333333221  369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       233 ~d~vG  237 (348)
T PLN03154        233 FDNVG  237 (348)
T ss_pred             EECCC
Confidence            98877

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.47  E-value=0.00065  Score=57.88  Aligned_cols=78  Identities=21%  Similarity=0.150  Sum_probs=53.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      |.++||+||++++|.++++.....|+ +|+.+.++.++.+.+.++++... .+  |..+. +..+.+.++..  +++|++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~-vi--~~~~~-~~~~~i~~~~~--~gvd~v  228 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA-AI--NYKTD-NVAERLRELCP--EGVDVY  228 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE-EE--ECCCC-CHHHHHHHHCC--CCceEE
Confidence            37999999999999999887778898 79999988877777666666432 22  22221 12222222221  369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.++|
T Consensus       229 id~~g  233 (345)
T cd08293         229 FDNVG  233 (345)
T ss_pred             EECCC
Confidence            98876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK05086 malate dehydrogenase; Provisional

Probab=97.46  E-value=0.0029  Score=53.31  Aligned_cols=144  Identities=16%  Similarity=0.097  Sum_probs=75.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHH-c--CCEEEEeeCCCchhHHHHHHhC--CCceEEec-CCCCHHHHHHHHHHHHHHcCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVR-E--GGRVVLCDLPTSEGESVAKELG--PDVKFAPV-DVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~-~--g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~-Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++|+||+|++|.+++..|.. .  +..+++.+|++. .+...-.+.  .....+.. +-.|   +       .+.....
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d---~-------~~~l~~~   70 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGED---P-------TPALEGA   70 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCC---H-------HHHcCCC
Confidence            799999999999999998854 2  357888888743 211000110  10111111 1111   1       1222368


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc--------
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA--------  151 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~--------  151 (254)
                      |++|.++|......            ++-...+..|......+    .+.|.+..+     ++.++++|-..        
T Consensus        71 DiVIitaG~~~~~~------------~~R~dll~~N~~i~~~i----i~~i~~~~~-----~~ivivvsNP~D~~t~~~~  129 (312)
T PRK05086         71 DVVLISAGVARKPG------------MDRSDLFNVNAGIVKNL----VEKVAKTCP-----KACIGIITNPVNTTVAIAA  129 (312)
T ss_pred             CEEEEcCCCCCCCC------------CCHHHHHHHHHHHHHHH----HHHHHHhCC-----CeEEEEccCchHHHHHHHH
Confidence            99999999743211            12334455665444444    455544431     34555554433        


Q ss_pred             ----cccCCCCCccchhchHHHHHhHHHHHHHhc
Q psy12833        152 ----AYEGQSGQVAYSASKSGIVGMTLPMARDLA  181 (254)
Q Consensus       152 ----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  181 (254)
                          -..++|.....+....--..|.+.+++.+.
T Consensus       130 ~~~~~~sg~p~~rvig~~~Lds~R~~~~ia~~l~  163 (312)
T PRK05086        130 EVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKG  163 (312)
T ss_pred             HHHHHhcCCCHHHEEeeecHHHHHHHHHHHHHhC
Confidence                111344444555553322456667777764

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.45  E-value=0.0026  Score=56.85  Aligned_cols=84  Identities=23%  Similarity=0.253  Sum_probs=57.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-------------HHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-------------EDVQKAV   69 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-------------~~~~~~~   69 (254)
                      .+.+|+|+|+ |.+|...+..+...|++|++++++.++++... +++.+  ++..|..+.             +..++..
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~--~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAE--FLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCe--EEEeccccccccccchhhhcchhHHHHHH
Confidence            4789999998 89999999988899999999999988777554 45544  333333221             1122222


Q ss_pred             HHHHHHcCCCcEEEeCCccCC
Q psy12833         70 LLCKDSFGKLDVNVNCAGISC   90 (254)
Q Consensus        70 ~~~~~~~~~id~li~~ag~~~   90 (254)
                      +.+.+..+..|++|.+++...
T Consensus       240 ~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCc
Confidence            222333357999999999643

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.44  E-value=0.0011  Score=55.16  Aligned_cols=79  Identities=15%  Similarity=0.251  Sum_probs=51.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCc---hhHHHHHHhCCCce--EEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTS---EGESVAKELGPDVK--FAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~~~~~--~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +++|+++|.|+ ||-+++++..|++.|+ +|+++.|+.+   +.+++.++++....  ....++.+.+.+.       +.
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~-------~~  193 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA-------EA  193 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhh-------hh
Confidence            36789999998 6679999999999997 7999999854   67777666543211  1111221111111       12


Q ss_pred             cCCCcEEEeCCcc
Q psy12833         76 FGKLDVNVNCAGI   88 (254)
Q Consensus        76 ~~~id~li~~ag~   88 (254)
                      ..+.|+|||+...
T Consensus       194 ~~~aDivINaTp~  206 (288)
T PRK12749        194 LASADILTNGTKV  206 (288)
T ss_pred             cccCCEEEECCCC
Confidence            2368999997654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.44  E-value=0.00063  Score=55.51  Aligned_cols=73  Identities=10%  Similarity=0.167  Sum_probs=54.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++||+|||+- |+.+++.|.++|++|+.+.++....+.+..   .....+..+.-|.+++.+++.+.     ++|++|..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~---~g~~~v~~g~l~~~~l~~~l~~~-----~i~~VIDA   72 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI---HQALTVHTGALDPQELREFLKRH-----SIDILVDA   72 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc---cCCceEEECCCCHHHHHHHHHhc-----CCCEEEEc
Confidence            6999999998 999999999999999998888765444332   11234556666777777776544     79999987


Q ss_pred             Cc
Q psy12833         86 AG   87 (254)
Q Consensus        86 ag   87 (254)
                      +.
T Consensus        73 tH   74 (256)
T TIGR00715        73 TH   74 (256)
T ss_pred             CC
Confidence            65

This enzyme was found to be a monomer by gel filtration.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.44  E-value=0.00047  Score=61.50  Aligned_cols=71  Identities=18%  Similarity=0.359  Sum_probs=52.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++.+..  .  .++   +++.        .....|+
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~--~--~~~---~~~~--------~l~~~Di  393 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK--A--FPL---ESLP--------ELHRIDI  393 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc--e--ech---hHhc--------ccCCCCE
Confidence            36789999996 79999999999999999999999888877776654321  1  111   1111        1246899


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|+|...
T Consensus       394 VInatP~  400 (477)
T PRK09310        394 IINCLPP  400 (477)
T ss_pred             EEEcCCC
Confidence            9999754

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.44  E-value=0.00086  Score=56.00  Aligned_cols=79  Identities=25%  Similarity=0.368  Sum_probs=55.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++++++|+|+++++|.++++.+...|++|++++++.+..+.+ ++++..   ...|..+.+...++.... . .+++|++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~-~-~~~~d~v  212 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGAD---VAINYRTEDFAEEVKEAT-G-GRGVDVI  212 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCC---EEEeCCchhHHHHHHHHh-C-CCCeEEE
Confidence            578999999999999999999999999999999987766655 444432   223333333333333222 1 1369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      ++++|
T Consensus       213 i~~~g  217 (323)
T cd05276         213 LDMVG  217 (323)
T ss_pred             EECCc
Confidence            99887

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.43  E-value=0.00068  Score=56.39  Aligned_cols=69  Identities=16%  Similarity=0.274  Sum_probs=48.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++|++++|+|. |++|+++++.|...|++|++++|+.++.+...+ .+  ...  .   +.+++.+++       ...|+
T Consensus       149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g--~~~--~---~~~~l~~~l-------~~aDi  212 (287)
T TIGR02853       149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE-MG--LIP--F---PLNKLEEKV-------AEIDI  212 (287)
T ss_pred             CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CC--Cee--e---cHHHHHHHh-------ccCCE
Confidence            46899999999 779999999999999999999998766544322 11  111  1   123333333       36899


Q ss_pred             EEeCC
Q psy12833         82 NVNCA   86 (254)
Q Consensus        82 li~~a   86 (254)
                      +|++.
T Consensus       213 Vint~  217 (287)
T TIGR02853       213 VINTI  217 (287)
T ss_pred             EEECC
Confidence            99975

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.42  E-value=0.00061  Score=57.64  Aligned_cols=79  Identities=18%  Similarity=0.195  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.++||+|+++++|.++++.+...|++|+.+.++.++.+.+ .+++... ++  |..+.+...+.+.....  +++|++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~-vi--~~~~~~~~~~~~~~~~~--~gvdvv  211 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDV-AF--NYKTVKSLEETLKKASP--DGYDCY  211 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCE-EE--eccccccHHHHHHHhCC--CCeEEE
Confidence            478999999999999999887778899999998887766655 4555422 12  22222233333333321  369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       212 ~d~~G  216 (325)
T TIGR02825       212 FDNVG  216 (325)
T ss_pred             EECCC
Confidence            98876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.39  E-value=0.0012  Score=58.39  Aligned_cols=80  Identities=21%  Similarity=0.203  Sum_probs=55.6

Q ss_pred             CCCcEEEEeCCC----------------ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGGA----------------SGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGas----------------~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~   65 (254)
                      |+||++|||+|.                |-+|.+||++++.+|++|++++-... +.     ....+..+.++  ..   
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-----~p~~v~~i~V~--ta---  322 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-----DPQGVKVIHVE--SA---  322 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-----CCCCceEEEec--CH---
Confidence            589999999875                78999999999999999998875332 10     12335555543  33   


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCcc
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAFK   93 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~   93 (254)
                      +++.+.+.+.+. .|++|++|+++...+
T Consensus       323 ~eM~~av~~~~~-~Di~I~aAAVaDyrp  349 (475)
T PRK13982        323 RQMLAAVEAALP-ADIAIFAAAVADWRV  349 (475)
T ss_pred             HHHHHHHHhhCC-CCEEEEeccccceee
Confidence            444455545443 699999999865443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.35  E-value=0.002  Score=56.65  Aligned_cols=72  Identities=26%  Similarity=0.536  Sum_probs=54.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +.+++++|.|+ |.+|+.+++.|.+.| .+|++++|+.++.+++.++++..  .+.     .+++.+.+.       ..|
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~--~i~-----~~~l~~~l~-------~aD  242 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE--AVK-----FEDLEEYLA-------EAD  242 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe--Eee-----HHHHHHHHh-------hCC
Confidence            46799999998 999999999999999 68999999988887777766432  221     233333333       579


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|.+.+.
T Consensus       243 vVi~aT~s  250 (417)
T TIGR01035       243 IVISSTGA  250 (417)
T ss_pred             EEEECCCC
Confidence            99998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.34  E-value=0.0032  Score=46.61  Aligned_cols=110  Identities=20%  Similarity=0.227  Sum_probs=67.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++.|+|++|.+|.+++..|...+.  ++++++++++.++-...++       ..+......   +++           .+
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~~~-----------~~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSG---DYE-----------AL   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEES---SGG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccc---ccc-----------cc
Confidence            689999999999999999998874  7999999977655444433       112222222   222           12


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      ..-|++|..+|......         .+   -.+.++.|..    +.+...+.+.+..+     ++.++.+|--
T Consensus        68 ~~aDivvitag~~~~~g---------~s---R~~ll~~N~~----i~~~~~~~i~~~~p-----~~~vivvtNP  120 (141)
T PF00056_consen   68 KDADIVVITAGVPRKPG---------MS---RLDLLEANAK----IVKEIAKKIAKYAP-----DAIVIVVTNP  120 (141)
T ss_dssp             TTESEEEETTSTSSSTT---------SS---HHHHHHHHHH----HHHHHHHHHHHHST-----TSEEEE-SSS
T ss_pred             ccccEEEEecccccccc---------cc---HHHHHHHhHh----HHHHHHHHHHHhCC-----ccEEEEeCCc
Confidence            26899999999753211         22   3444555554    34444555544431     5677776653

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.33  E-value=0.0019  Score=55.07  Aligned_cols=36  Identities=28%  Similarity=0.461  Sum_probs=32.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      +++++|+|.|+ ||+|..+++.|++.|. ++++++++.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46789999998 7899999999999997 888999874

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.33  E-value=0.0012  Score=58.21  Aligned_cols=72  Identities=19%  Similarity=0.421  Sum_probs=54.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.+.+.++++..  .+     +.+++.+.+       ...|
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~--~~-----~~~~~~~~l-------~~aD  244 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE--AI-----PLDELPEAL-------AEAD  244 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc--Ee-----eHHHHHHHh-------ccCC
Confidence            46899999987 9999999999999997 7999999988888887776531  11     223333222       2679


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|.+.+.
T Consensus       245 vVI~aT~s  252 (423)
T PRK00045        245 IVISSTGA  252 (423)
T ss_pred             EEEECCCC
Confidence            99988774

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.33  E-value=0.0013  Score=55.44  Aligned_cols=74  Identities=30%  Similarity=0.367  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .+.+++|+|+++++|.++++.+...|++|+.+.++.++.+.+ .+++.. ..+  |.   ++   +.+.+.+ ..++|++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~-~~~--~~---~~---~~~~~~~-~~~~d~v  230 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGAD-YVI--DG---SK---FSEDVKK-LGGADVV  230 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCc-EEE--ec---HH---HHHHHHh-ccCCCEE
Confidence            467999999999999999999999999999988877665554 333321 111  21   11   2222222 2379999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      ++|+|
T Consensus       231 ~~~~g  235 (332)
T cd08259         231 IELVG  235 (332)
T ss_pred             EECCC
Confidence            99987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.31  E-value=0.0075  Score=48.49  Aligned_cols=37  Identities=27%  Similarity=0.410  Sum_probs=31.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~   39 (254)
                      +++++++|.|. ||+|..+++.|++.|. ++++++.+.-
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V   46 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVV   46 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEE
Confidence            45688999988 8999999999999997 7888887643

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN00203 glutamyl-tRNA reductase

Probab=97.27  E-value=0.0022  Score=57.62  Aligned_cols=76  Identities=17%  Similarity=0.251  Sum_probs=55.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.++.+.+.++++. .....   ...+++.+.+.       ..|
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~---~~~~dl~~al~-------~aD  331 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIY---KPLDEMLACAA-------EAD  331 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEe---ecHhhHHHHHh-------cCC
Confidence            45799999999 9999999999999997 799999999998888877631 11111   12223333333       679


Q ss_pred             EEEeCCccC
Q psy12833         81 VNVNCAGIS   89 (254)
Q Consensus        81 ~li~~ag~~   89 (254)
                      +||.+.+..
T Consensus       332 VVIsAT~s~  340 (519)
T PLN00203        332 VVFTSTSSE  340 (519)
T ss_pred             EEEEccCCC
Confidence            999887643

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.27  E-value=0.0041  Score=44.97  Aligned_cols=76  Identities=18%  Similarity=0.252  Sum_probs=55.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHH-cCCEEE-EeeCCC----------------------chhHHHHHHhCCCceEEecCCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVR-EGGRVV-LCDLPT----------------------SEGESVAKELGPDVKFAPVDVTS   61 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~-~g~~v~-~~~r~~----------------------~~~~~~~~~~~~~~~~~~~Dls~   61 (254)
                      ++.|.|++|.+|+.+++.+.+ .+.++. .++|+.                      ..++++.++    + =+..|+|.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~----~-DVvIDfT~   76 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE----A-DVVIDFTN   76 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------SEEEEES-
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc----C-CEEEEcCC
Confidence            689999999999999999988 677765 466665                      223333222    1 16679999


Q ss_pred             HHHHHHHHHHHHHHcCCCcEEEeCCcc
Q psy12833         62 EEDVQKAVLLCKDSFGKLDVNVNCAGI   88 (254)
Q Consensus        62 ~~~~~~~~~~~~~~~~~id~li~~ag~   88 (254)
                      ++.+...++.+.+.  ++.+++-..|.
T Consensus        77 p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   77 PDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             hHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999999888  88888888774

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.25  E-value=0.0018  Score=54.63  Aligned_cols=72  Identities=24%  Similarity=0.426  Sum_probs=54.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +.+++++|.|+ |.+|+.+++.|...| .+|++++|+.++.+++.++++..  .+     +.+++.+.+.       ..|
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~--~~-----~~~~~~~~l~-------~aD  240 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN--AV-----PLDELLELLN-------EAD  240 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe--EE-----eHHHHHHHHh-------cCC
Confidence            46899999998 999999999998876 57889999988888888877541  11     2233333333       579


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|.+.+.
T Consensus       241 vVi~at~~  248 (311)
T cd05213         241 VVISATGA  248 (311)
T ss_pred             EEEECCCC
Confidence            99999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.22  E-value=0.011  Score=49.87  Aligned_cols=112  Identities=14%  Similarity=0.167  Sum_probs=70.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCC------CceEEecCCCCHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGP------DVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +++++.|+|+ |.+|.+++..|+..|.  ++++.+++.+.++-...++..      ++... .  .+.+           
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~-----------   69 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS-----------   69 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH-----------
Confidence            3689999998 9999999999998886  799999988876655554421      21111 1  1211           


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      .+..-|++|..+|....+.         ++-   .+.+..|.    .+.+...+.+.+..+     ++.++++|-.
T Consensus        70 ~~~~adivIitag~~~k~g---------~~R---~dll~~N~----~i~~~i~~~i~~~~~-----~~~vivvsNP  124 (315)
T PRK00066         70 DCKDADLVVITAGAPQKPG---------ETR---LDLVEKNL----KIFKSIVGEVMASGF-----DGIFLVASNP  124 (315)
T ss_pred             HhCCCCEEEEecCCCCCCC---------CCH---HHHHHHHH----HHHHHHHHHHHHhCC-----CeEEEEccCc
Confidence            1237899999999753221         222   33344444    334444555555431     5777777743

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.22  E-value=0.0029  Score=49.83  Aligned_cols=36  Identities=25%  Similarity=0.350  Sum_probs=31.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      +++++++|.|+ ||+|..+++.|+..|. ++++++++.
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~   55 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDH   55 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCE
Confidence            46788999996 8999999999999997 899998873

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.20  E-value=0.0019  Score=54.47  Aligned_cols=78  Identities=17%  Similarity=0.196  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.++||+||++++|.++++.....|++|+.+.++.++.+.+.+ ++..- .+  |..+.+..++ +.+...  +++|++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~-vi--~~~~~~~~~~-v~~~~~--~gvd~v  215 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDA-VF--NYKTVSLEEA-LKEAAP--DGIDCY  215 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE-EE--eCCCccHHHH-HHHHCC--CCcEEE
Confidence            57899999999999999988888889999999888776665543 55421 22  3333222222 222211  369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       216 ld~~g  220 (329)
T cd08294         216 FDNVG  220 (329)
T ss_pred             EECCC
Confidence            98776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.18  E-value=0.0017  Score=52.09  Aligned_cols=73  Identities=23%  Similarity=0.323  Sum_probs=57.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHH-HHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKA-VLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~-~~~~~~~~~~id~li~   84 (254)
                      .++|.|+ |-+|+.+|+.|.+.|++|++++++++..++...+ ....+.+.+|-+|++-++++ ++       ..|++|-
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~-~~~~~~v~gd~t~~~~L~~agi~-------~aD~vva   72 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD-ELDTHVVIGDATDEDVLEEAGID-------DADAVVA   72 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh-hcceEEEEecCCCHHHHHhcCCC-------cCCEEEE
Confidence            5777777 8899999999999999999999999887774331 13577889999998866555 22       6788877


Q ss_pred             CCc
Q psy12833         85 CAG   87 (254)
Q Consensus        85 ~ag   87 (254)
                      ..+
T Consensus        73 ~t~   75 (225)
T COG0569          73 ATG   75 (225)
T ss_pred             eeC
Confidence            666

>KOG1198|consensus

Probab=97.17  E-value=0.0032  Score=53.77  Aligned_cols=78  Identities=32%  Similarity=0.415  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHH-cCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDS-FGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~~~id~   81 (254)
                      +|+.+||.||++|+|.+.++-....|+..+++.++++..+ +.++++.   -...|..+++    ..+.+++. .+++|+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~lGA---d~vvdy~~~~----~~e~~kk~~~~~~Dv  228 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKLGA---DEVVDYKDEN----VVELIKKYTGKGVDV  228 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHcCC---cEeecCCCHH----HHHHHHhhcCCCccE
Confidence            5789999999999999999987788855555566555443 4455542   1335666633    33444433 458999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      ++-|.|.
T Consensus       229 VlD~vg~  235 (347)
T KOG1198|consen  229 VLDCVGG  235 (347)
T ss_pred             EEECCCC
Confidence            9999985

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.17  E-value=0.002  Score=53.90  Aligned_cols=69  Identities=19%  Similarity=0.259  Sum_probs=48.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.+++++|.|. |++|+.++..|.+.|++|++++|+.+..+.. ++.+  ..++  +   .+++.+       .....|+
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G--~~~~--~---~~~l~~-------~l~~aDi  213 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARI-TEMG--LSPF--H---LSELAE-------EVGKIDI  213 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcC--Ceee--c---HHHHHH-------HhCCCCE
Confidence            46899999998 6799999999999999999999987664443 2333  2222  1   122222       2236899


Q ss_pred             EEeCC
Q psy12833         82 NVNCA   86 (254)
Q Consensus        82 li~~a   86 (254)
                      +|+++
T Consensus       214 VI~t~  218 (296)
T PRK08306        214 IFNTI  218 (296)
T ss_pred             EEECC
Confidence            99975

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.16  E-value=0.0063  Score=49.96  Aligned_cols=37  Identities=27%  Similarity=0.423  Sum_probs=31.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~   39 (254)
                      |++++|+|.|+ ||+|..+++.|++.| .++++++.+.-
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V   65 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDV   65 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEe
Confidence            46788999987 799999999999999 58989887643

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.14  E-value=0.0074  Score=53.94  Aligned_cols=83  Identities=23%  Similarity=0.229  Sum_probs=59.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCC-------------HHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-------------EEDVQKAV   69 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-------------~~~~~~~~   69 (254)
                      .+.+++|.|+ |.+|...+..+...|+.|++++++.++++... +++  ..++..|..+             .+..++..
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lG--a~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~  238 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMG--AEFLELDFKEEGGSGDGYAKVMSEEFIAAEM  238 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC--CeEEeccccccccccccceeecCHHHHHHHH
Confidence            4578999997 99999999999999999999999888765543 343  3444555321             34455555


Q ss_pred             HHHHHHcCCCcEEEeCCccC
Q psy12833         70 LLCKDSFGKLDVNVNCAGIS   89 (254)
Q Consensus        70 ~~~~~~~~~id~li~~ag~~   89 (254)
                      +...++....|++|+++-+.
T Consensus       239 ~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       239 ELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHhCCCCEEEECcccC
Confidence            55666667899999998543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.14  E-value=0.0033  Score=47.75  Aligned_cols=82  Identities=12%  Similarity=0.159  Sum_probs=60.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----------CCCceEEecCCCCHHHHHHHHHH--H
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----------GPDVKFAPVDVTSEEDVQKAVLL--C   72 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dls~~~~~~~~~~~--~   72 (254)
                      +++-+.|- |-+|+.+++.|+++|++|++.+|++++.+++.++-          -.+...+-.-+.|.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            36788887 89999999999999999999999988888776532          12346667778899999999998  7


Q ss_pred             HHHcCCCcEEEeCCc
Q psy12833         73 KDSFGKLDVNVNCAG   87 (254)
Q Consensus        73 ~~~~~~id~li~~ag   87 (254)
                      .....+=.++|.+..
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            766655667776654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=97.13  E-value=0.0026  Score=53.27  Aligned_cols=79  Identities=24%  Similarity=0.344  Sum_probs=53.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|++++|+|+++++|.++++.+...|++|+++.++++..+.+ .+++.+.   ..+..+.+....+.... . ..++|++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~~~~~~~-~-~~~~d~~  212 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADI---AINYREEDFVEVVKAET-G-GKGVDVI  212 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcE---EEecCchhHHHHHHHHc-C-CCCeEEE
Confidence            578999999999999999999999999999999887766544 4444321   12223333333322211 1 1259999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      ++++|
T Consensus       213 i~~~~  217 (325)
T TIGR02824       213 LDIVG  217 (325)
T ss_pred             EECCc
Confidence            99876

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.10  E-value=0.0021  Score=53.27  Aligned_cols=36  Identities=25%  Similarity=0.428  Sum_probs=33.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~   37 (254)
                      ++||+++|.|+|+-.|+.++..|.++|++|+++.|.
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            579999999998889999999999999999998874

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.08  E-value=0.0031  Score=51.33  Aligned_cols=77  Identities=27%  Similarity=0.347  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.+++|+|+++ +|.++++.+...|.+|+.++++.++.+.+ ++.+..   ...|..+.+....+.   ....+++|++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~---~~~~~~~d~v  205 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KELGAD---HVIDYKEEDLEEELR---LTGGGGADVV  205 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCc---eeccCCcCCHHHHHH---HhcCCCCCEE
Confidence            578999999988 99999998888999999999987665554 334321   112333333333333   2223479999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +++++
T Consensus       206 i~~~~  210 (271)
T cd05188         206 IDAVG  210 (271)
T ss_pred             EECCC
Confidence            99876

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.05  E-value=0.0011  Score=42.68  Aligned_cols=33  Identities=21%  Similarity=0.303  Sum_probs=22.7

Q ss_pred             cEEEEeCCCChHHHH--HHHHHHHcCCEEEEeeCCC
Q psy12833          5 VVGLVTGGASGLGKA--TVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         5 ~~~lItGas~giG~a--~a~~l~~~g~~v~~~~r~~   38 (254)
                      |+|||+|+|+|.|.+  |+..| ..|++.+.++...
T Consensus        40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            899999999999998  66666 6688887776543

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.05  E-value=0.0031  Score=60.81  Aligned_cols=76  Identities=16%  Similarity=0.222  Sum_probs=62.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcC-CE-------------EEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREG-GR-------------VVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAV   69 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~   69 (254)
                      .|+++|.|+ |.+|+..++.|++.. +.             |++++++.++++++.++. .++.++++|++|.+++.+++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-ENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-CCCceEEeecCCHHHHHHhh
Confidence            478999998 999999999998753 33             888999988888777665 35778999999999888877


Q ss_pred             HHHHHHcCCCcEEEeCCcc
Q psy12833         70 LLCKDSFGKLDVNVNCAGI   88 (254)
Q Consensus        70 ~~~~~~~~~id~li~~ag~   88 (254)
                      +       ++|+||++...
T Consensus       647 ~-------~~DaVIsalP~  658 (1042)
T PLN02819        647 S-------QVDVVISLLPA  658 (1042)
T ss_pred             c-------CCCEEEECCCc
Confidence            7       58999999864

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.03  E-value=0.0057  Score=52.13  Aligned_cols=36  Identities=33%  Similarity=0.482  Sum_probs=32.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      |+.++|+|.|+ ||+|..+++.|++.|. ++.+++++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            45788999999 8999999999999998 899999874

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.02  E-value=0.0033  Score=44.62  Aligned_cols=70  Identities=24%  Similarity=0.268  Sum_probs=52.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a   86 (254)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+++.++   .+.++.+|.+|++.++++--      .+.+.+|...
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~---~~~~i~gd~~~~~~l~~a~i------~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE---GVEVIYGDATDPEVLERAGI------EKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT---TSEEEES-TTSHHHHHHTTG------GCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc---ccccccccchhhhHHhhcCc------cccCEEEEcc
Confidence            467777 5899999999999777999999998887777653   38899999999886665411      2677777654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=97.01  E-value=0.0036  Score=52.84  Aligned_cols=79  Identities=19%  Similarity=0.173  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++.+++|.|+++++|.++++.+.+.|++|+.+.++.++.+.+.+.++.. .++  |..+.+..+++. +...  +++|++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~v~-~~~~--~~~d~v  218 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFD-AAI--NYKTPDLAEALK-EAAP--DGIDVY  218 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCc-eEE--ecCChhHHHHHH-Hhcc--CCceEE
Confidence            4689999999999999999988899999999988877766654435431 122  222333222222 2221  479999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.++|
T Consensus       219 i~~~g  223 (329)
T cd05288         219 FDNVG  223 (329)
T ss_pred             EEcch
Confidence            98876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.00  E-value=0.0021  Score=49.01  Aligned_cols=37  Identities=24%  Similarity=0.390  Sum_probs=33.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      ++||+++|.|++.-.|..+++.|.++|++|+++.|+.
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            5799999999977789999999999999999999864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.98  E-value=0.004  Score=52.15  Aligned_cols=79  Identities=19%  Similarity=0.237  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++++++|+|+++++|.++++.+...|++++.++++.++.+.+ .+.+.. .++  |....+....+.+ ... ..++|++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~~~~~~-~~~-~~~~d~v  217 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAA-HVI--VTDEEDLVAEVLR-ITG-GKGVDVV  217 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCC-EEE--ecCCccHHHHHHH-HhC-CCCceEE
Confidence            578999999999999999999999999999999887666655 444321 122  2222222222222 211 1269999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +++++
T Consensus       218 i~~~~  222 (328)
T cd08268         218 FDPVG  222 (328)
T ss_pred             EECCc
Confidence            98876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.95  E-value=0.0063  Score=49.47  Aligned_cols=37  Identities=35%  Similarity=0.429  Sum_probs=32.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~   39 (254)
                      +++++|+|.|+ ||+|..+++.|+..|. ++++++.+.-
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~v   67 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTV   67 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEE
Confidence            46789999999 9999999999999997 7888877643

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.95  E-value=0.01  Score=43.48  Aligned_cols=76  Identities=21%  Similarity=0.482  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCc-------------------hhHHHH---HHhC--CCceEEec
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTS-------------------EGESVA---KELG--PDVKFAPV   57 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~-------------------~~~~~~---~~~~--~~~~~~~~   57 (254)
                      ++++++|.|+ |++|..+++.|++.|. ++++++.+.-                   +.+.+.   .++.  .++..+..
T Consensus         1 r~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~   79 (135)
T PF00899_consen    1 RNKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE   79 (135)
T ss_dssp             HT-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec
Confidence            3578999998 8999999999999998 7888877532                   122222   2223  34556666


Q ss_pred             CCCCHHHHHHHHHHHHHHcCCCcEEEeCCc
Q psy12833         58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG   87 (254)
Q Consensus        58 Dls~~~~~~~~~~~~~~~~~~id~li~~ag   87 (254)
                      ++ +.+...++++       ..|++|.+..
T Consensus        80 ~~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   80 KI-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             HC-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             cc-cccccccccc-------CCCEEEEecC
Confidence            66 3455555553       6788887644

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK04148 hypothetical protein; Provisional

Probab=96.93  E-value=0.0019  Score=47.04  Aligned_cols=56  Identities=14%  Similarity=0.070  Sum_probs=46.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEE   63 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~   63 (254)
                      +++++++.|.+  .|.+++..|++.|++|+.++.++...+...+.   .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~---~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL---GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---CCeEEECcCCCCC
Confidence            35789999986  78888999999999999999998876666543   4678889998775

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.92  E-value=0.0056  Score=52.24  Aligned_cols=75  Identities=24%  Similarity=0.382  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +|++++|+|+ |++|...++.+...|+ +|+++++++++.+.. .+++....   .|..+. ++.+    +.+..+.+|+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~v---i~~~~~-~~~~----~~~~~g~~D~  238 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADKL---VNPQND-DLDH----YKAEKGYFDV  238 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcEE---ecCCcc-cHHH----HhccCCCCCE
Confidence            5789999986 8999999987778898 588889887776544 45654321   233332 2222    2222356999


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|.++|
T Consensus       239 vid~~G  244 (343)
T PRK09880        239 SFEVSG  244 (343)
T ss_pred             EEECCC
Confidence            999987

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.90  E-value=0.0038  Score=55.40  Aligned_cols=72  Identities=15%  Similarity=0.196  Sum_probs=53.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHH-HHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKA-VLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~-~~~~~~~~~~id~li~   84 (254)
                      +++|.|+ |.+|+++++.|.++|+.|++++++.+..+.+.++  ..+.++.+|.++.+.++++ +       .+.|.+|.
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~--~~~~~~~gd~~~~~~l~~~~~-------~~a~~vi~   71 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR--LDVRTVVGNGSSPDVLREAGA-------EDADLLIA   71 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh--cCEEEEEeCCCCHHHHHHcCC-------CcCCEEEE
Confidence            6888988 9999999999999999999999988877766542  2466777787776655444 2       24566665


Q ss_pred             CCc
Q psy12833         85 CAG   87 (254)
Q Consensus        85 ~ag   87 (254)
                      +..
T Consensus        72 ~~~   74 (453)
T PRK09496         72 VTD   74 (453)
T ss_pred             ecC
Confidence            543

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.88  E-value=0.0081  Score=52.06  Aligned_cols=35  Identities=23%  Similarity=0.298  Sum_probs=30.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~   37 (254)
                      +++++|+|.|+ ||+|..++..|++.|. ++++++++
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35678999977 8999999999999998 78899887

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.83  E-value=0.0092  Score=50.43  Aligned_cols=73  Identities=22%  Similarity=0.296  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|++++|+|++ |+|...++.....|++|+.++|+.++++.. .+++.....   |-+|++.++.+-+       ..|++
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a-~~lGAd~~i---~~~~~~~~~~~~~-------~~d~i  233 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA-KKLGADHVI---NSSDSDALEAVKE-------IADAI  233 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH-HHhCCcEEE---EcCCchhhHHhHh-------hCcEE
Confidence            48899999998 999888877667999999999998877655 445433222   2224554444433       28999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.+++
T Consensus       234 i~tv~  238 (339)
T COG1064         234 IDTVG  238 (339)
T ss_pred             EECCC
Confidence            98876

>PRK05442 malate dehydrogenase; Provisional

Probab=96.80  E-value=0.011  Score=50.16  Aligned_cols=120  Identities=15%  Similarity=0.053  Sum_probs=68.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHH----HHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGG-------RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQ----KAV   69 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~----~~~   69 (254)
                      |-+-+++.|+|++|.+|..++..|+..|.       ++++.+.++..         .+......|+.|.....    ...
T Consensus         1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~---------~~~~g~a~Dl~~~~~~~~~~~~i~   71 (326)
T PRK05442          1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPAL---------KALEGVVMELDDCAFPLLAGVVIT   71 (326)
T ss_pred             CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcc---------cccceeehhhhhhhhhhcCCcEEe
Confidence            33457899999999999999999987764       68899985431         01122223333222000    001


Q ss_pred             HHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         70 LLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        70 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      ..-.+.+..-|++|.+||.....            -++-.+.+..|.    .+.+.+.+.+.+...    +++.++++|-
T Consensus        72 ~~~y~~~~daDiVVitaG~~~k~------------g~tR~dll~~Na----~i~~~i~~~i~~~~~----~~~iiivvsN  131 (326)
T PRK05442         72 DDPNVAFKDADVALLVGARPRGP------------GMERKDLLEANG----AIFTAQGKALNEVAA----RDVKVLVVGN  131 (326)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCC------------CCcHHHHHHHHH----HHHHHHHHHHHHhCC----CCeEEEEeCC
Confidence            11123334789999999974321            123344455554    445666666666320    1567777774

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.79  E-value=0.011  Score=46.93  Aligned_cols=36  Identities=28%  Similarity=0.404  Sum_probs=31.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      |++++++|.|+ ||+|..+++.|++.|. ++++++.+.
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   62 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDV   62 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            46788999997 8999999999999998 588988873

>KOG1196|consensus

Probab=96.78  E-value=0.055  Score=44.64  Aligned_cols=165  Identities=17%  Similarity=0.205  Sum_probs=96.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|+|++|.||+|..|.-+-+--.-.|++|+..+-+.++..-+.++++-..   ..|--++.++.+++++...+  .||+.
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~---afNYK~e~~~~~aL~r~~P~--GIDiY  227 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDD---AFNYKEESDLSAALKRCFPE--GIDIY  227 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCcc---ceeccCccCHHHHHHHhCCC--cceEE
Confidence            57999999999999976555333459999988888888877777764321   12333444556666654333  79999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      +-|.|..                                +..+.+..|..        .++|+..+-++.+.-..+....
T Consensus       228 feNVGG~--------------------------------~lDavl~nM~~--------~gri~~CG~ISqYN~~~~~~~~  267 (343)
T KOG1196|consen  228 FENVGGK--------------------------------MLDAVLLNMNL--------HGRIAVCGMISQYNLENPEGLH  267 (343)
T ss_pred             EeccCcH--------------------------------HHHHHHHhhhh--------ccceEeeeeehhccccCCcccc
Confidence            9999841                                13344555655        5789887766655432111111


Q ss_pred             hhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      .        +...+-++     +++.    |+.-++....+ ++..+++.+.+.. ++....|++++.+
T Consensus       268 ~--------l~~ii~Kr-----~~iq----gflv~d~~d~~-~k~ld~l~~~ike-gKI~y~edi~~Gl  317 (343)
T KOG1196|consen  268 N--------LSTIIYKR-----IRIQ----GFLVSDYLDKY-PKFLDFLLPYIKE-GKITYVEDIADGL  317 (343)
T ss_pred             c--------hhhheeee-----EEee----eEEeechhhhh-HHHHHHHHHHHhc-CceEEehhHHHHH
Confidence            1        11112222     2222    12333333333 4444555555555 7778888888753

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.77  E-value=0.0086  Score=45.05  Aligned_cols=42  Identities=24%  Similarity=0.321  Sum_probs=32.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGES   43 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~   43 (254)
                      |+.||+++|.|- |.+|+.+|+.|...|++|+++..++-.+-+
T Consensus        20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alq   61 (162)
T PF00670_consen   20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQ   61 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred             eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence            578999999987 899999999999999999999998755443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.76  E-value=0.0069  Score=50.91  Aligned_cols=79  Identities=29%  Similarity=0.271  Sum_probs=53.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.++.+.+ ++++.. .+  .|..+.+..+.+.+..  ...++|++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~--~~~~~~~~~~~~~~~~--~~~~~d~v  215 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGAD-VA--VDYTRPDWPDQVREAL--GGGGVTVV  215 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCC-EE--EecCCccHHHHHHHHc--CCCCceEE
Confidence            467899999999999999998889999999999887776655 455432 11  2333333333322211  11259999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +++.|
T Consensus       216 l~~~g  220 (324)
T cd08244         216 LDGVG  220 (324)
T ss_pred             EECCC
Confidence            99876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.75  E-value=0.015  Score=46.78  Aligned_cols=35  Identities=34%  Similarity=0.460  Sum_probs=29.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~   37 (254)
                      +++++|+|.|+ ||+|..+++.|++.|. ++++++.+
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            45789999996 8999999999999997 67777664

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.73  E-value=0.022  Score=46.80  Aligned_cols=77  Identities=23%  Similarity=0.253  Sum_probs=49.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC----CEEEEeeCCCchhHHHHHHhCCCceEE-ecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          7 GLVTGGASGLGKATVERIVREG----GRVVLCDLPTSEGESVAKELGPDVKFA-PVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.|+||+|.+|..++..|+..|    .++++.+++++.++....++..-.... ...++-.++..+.+       ...|+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~-------~~aDi   73 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAF-------KDADV   73 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHh-------CCCCE
Confidence            4689998899999999999988    789999999887766655542111110 01111001112222       36899


Q ss_pred             EEeCCccCC
Q psy12833         82 NVNCAGISC   90 (254)
Q Consensus        82 li~~ag~~~   90 (254)
                      +|..+|...
T Consensus        74 Vv~t~~~~~   82 (263)
T cd00650          74 VIITAGVGR   82 (263)
T ss_pred             EEECCCCCC
Confidence            999998754

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.73  E-value=0.0064  Score=51.14  Aligned_cols=77  Identities=12%  Similarity=0.091  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      +|.+++|.|+++++|.++++.....|++++.+.++.+..+.+.+ ++.. .++  +..+.+    +.+.+.+..  .++|
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~----~~~~i~~~~~~~~~d  210 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIG-PVV--STEQPG----WQDKVREAAGGAPIS  210 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCC-EEE--cCCCch----HHHHHHHHhCCCCCc
Confidence            57899999999999999999888999999999888777666644 4431 122  222222    222233322  2699


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      +++.+.|
T Consensus       211 ~v~d~~g  217 (324)
T cd08292         211 VALDSVG  217 (324)
T ss_pred             EEEECCC
Confidence            9998877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.68  E-value=0.021  Score=50.07  Aligned_cols=41  Identities=24%  Similarity=0.392  Sum_probs=36.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGES   43 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~   43 (254)
                      +.|++++|.|. |.||+.+++.|...|++|+++++++.+...
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~  250 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ  250 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence            57999999997 689999999999999999999998766543

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.68  E-value=0.0094  Score=50.68  Aligned_cols=77  Identities=23%  Similarity=0.282  Sum_probs=51.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|.+++|+|+ +++|...++.+...|++ |+++++++++.+.+ .+++...   ..|..+.+ .+++.+ ... ..++|+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~~---~i~~~~~~-~~~~~~-~~~-~~~~d~  234 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGADF---VINSGQDD-VQEIRE-LTS-GAGADV  234 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE---EEcCCcch-HHHHHH-HhC-CCCCCE
Confidence            4789999986 89999999988888998 99988887776554 5555321   12333333 222222 211 126999


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|.+.|
T Consensus       235 vid~~g  240 (339)
T cd08239         235 AIECSG  240 (339)
T ss_pred             EEECCC
Confidence            999877

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.67  E-value=0.0071  Score=44.61  Aligned_cols=40  Identities=30%  Similarity=0.363  Sum_probs=35.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG   41 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~   41 (254)
                      ++||+++|.|.|.-.|+.++..|.++|++|.++.++...+
T Consensus        26 ~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l   65 (140)
T cd05212          26 LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQL   65 (140)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCH
Confidence            5799999999999999999999999999999998765433

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>KOG4288|consensus

Probab=96.67  E-value=0.029  Score=44.49  Aligned_cols=196  Identities=13%  Similarity=0.035  Sum_probs=119.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ..++.|+.+..|.++++.-...+..|.+..|+..  ++..+.....+.|+..|.-...-.+...       .++.-++-+
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw~~~vswh~gnsfssn~~k~~l-------~g~t~v~e~  124 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSWPTYVSWHRGNSFSSNPNKLKL-------SGPTFVYEM  124 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCCCcccchhhccccccCcchhhh-------cCCcccHHH
Confidence            5688999999999999999999999999998765  4455555667777777654322111111       255666666


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCCCCCccchh
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQSGQVAYSA  164 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~~~~~~Y~~  164 (254)
                      .|..+                ....+..+|=.......+++...    .      -.+++++|-...- .+.... .|=-
T Consensus       125 ~ggfg----------------n~~~m~~ing~ani~a~kaa~~~----g------v~~fvyISa~d~~~~~~i~r-GY~~  177 (283)
T KOG4288|consen  125 MGGFG----------------NIILMDRINGTANINAVKAAAKA----G------VPRFVYISAHDFGLPPLIPR-GYIE  177 (283)
T ss_pred             hcCcc----------------chHHHHHhccHhhHHHHHHHHHc----C------CceEEEEEhhhcCCCCccch-hhhc
Confidence            65432                12334455555555555555442    2      4689999886542 333332 5888


Q ss_pred             chHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-----c--hHHH----HHHH---HhcCCCC----CCCCCHHH
Q psy12833        165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-----L--NEKV----RNFL---ARSIPAP----QRLGHPDE  226 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-----~--~~~~----~~~~---~~~~~~~----~~~~~~~~  226 (254)
                      +|.+.+.-      -+..++.|=..++||++.....-.     +  -.+.    ..+.   ..++|..    .....+|+
T Consensus       178 gKR~AE~E------ll~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~  251 (283)
T KOG4288|consen  178 GKREAEAE------LLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVES  251 (283)
T ss_pred             cchHHHHH------HHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHH
Confidence            88866532      223445666778999996642110     0  0111    1111   2233332    23457899


Q ss_pred             HHHHHHHHhcCCCcccc
Q psy12833        227 FAQLVQSIITNPLINGE  243 (254)
Q Consensus       227 va~~~~~l~~~~~~~G~  243 (254)
                      ||.+++..+++++..|-
T Consensus       252 VA~aal~ai~dp~f~Gv  268 (283)
T KOG4288|consen  252 VALAALKAIEDPDFKGV  268 (283)
T ss_pred             HHHHHHHhccCCCcCce
Confidence            99999999998887763

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.66  E-value=0.0068  Score=49.92  Aligned_cols=79  Identities=23%  Similarity=0.231  Sum_probs=56.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC-CCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG-KLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-~id~   81 (254)
                      .|.|++|++|+|..|.-+.+--.-+|++|+.++-..++.+-+.++++-..   ..|--++    ++.+.+.+..+ .||+
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~---~idyk~~----d~~~~L~~a~P~GIDv  222 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA---GIDYKAE----DFAQALKEACPKGIDV  222 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCce---eeecCcc----cHHHHHHHHCCCCeEE
Confidence            58999999999999987776444669999999999999888888775321   1233222    23344444443 7999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      .+-|.|.
T Consensus       223 yfeNVGg  229 (340)
T COG2130         223 YFENVGG  229 (340)
T ss_pred             EEEcCCc
Confidence            9999984

>PRK08223 hypothetical protein; Validated

Probab=96.65  E-value=0.0061  Score=50.39  Aligned_cols=80  Identities=14%  Similarity=0.182  Sum_probs=50.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.-+..++.++    +.+-.-|+..+ -++.+.+.+.+..+.++
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ----~l~~~~diG~~-Kve~a~~~l~~iNP~v~   98 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQ----AGAMMSTLGRP-KAEVLAEMVRDINPELE   98 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccc----cCcChhHCCCc-HHHHHHHHHHHHCCCCE
Confidence            46788999998 7999999999999997 788888876544433222    22223344332 23444444444444555


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      +..++..
T Consensus        99 V~~~~~~  105 (287)
T PRK08223         99 IRAFPEG  105 (287)
T ss_pred             EEEEecc
Confidence            5555443

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.65  E-value=0.017  Score=49.80  Aligned_cols=74  Identities=22%  Similarity=0.260  Sum_probs=50.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|++++|.|+ +++|...++.+...|++|++++.+.++..+..++++.... +  |..+.+.+.+       ..+.+|++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~v-i--~~~~~~~~~~-------~~~~~D~v  251 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSF-L--VSTDPEKMKA-------AIGTMDYI  251 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEE-E--cCCCHHHHHh-------hcCCCCEE
Confidence            4789999775 8999999998888899998888877666666566654211 1  2233322222       22368999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.+.|
T Consensus       252 id~~g  256 (360)
T PLN02586        252 IDTVS  256 (360)
T ss_pred             EECCC
Confidence            98877

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.64  E-value=0.0071  Score=47.58  Aligned_cols=35  Identities=26%  Similarity=0.449  Sum_probs=31.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~   37 (254)
                      |+.++++|.|+ ||+|..++..|++.|. ++++++++
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45688999999 8999999999999998 79999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.63  E-value=0.0092  Score=49.65  Aligned_cols=77  Identities=16%  Similarity=0.216  Sum_probs=55.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||.+.|.|.|+-+|+-++..|.++|++|+++.|+....++..++    ...+..-+.++..+...+  +     +...
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~----ADIVIsavg~~~~v~~~~--i-----k~Ga  225 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ----ADIVVAAVGRPRLIDADW--L-----KPGA  225 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc----CCEEEEecCChhcccHhh--c-----cCCc
Confidence            5799999999999999999999999999999998877766655543    344444456666555443  1     4445


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|...|+.
T Consensus       226 iVIDvgin  233 (301)
T PRK14194        226 VVIDVGIN  233 (301)
T ss_pred             EEEEeccc
Confidence            55555654

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.63  E-value=0.011  Score=49.79  Aligned_cols=78  Identities=26%  Similarity=0.267  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.+++|.|+++.+|.++++...+.|++|+.+.++.++.+.+ .+++.. .++  |..+. +..+.+.....  .++|++
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~--~~~~~-~~~~~~~~~~~--~~vd~v  211 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCD-RPI--NYKTE-DLGEVLKKEYP--KGVDVV  211 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCc-eEE--eCCCc-cHHHHHHHhcC--CCCeEE
Confidence            578999999999999999998888899999988877666555 445432 122  22222 22223322221  368999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +++.|
T Consensus       212 ~~~~g  216 (329)
T cd08250         212 YESVG  216 (329)
T ss_pred             EECCc
Confidence            98866

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.62  E-value=0.01  Score=49.97  Aligned_cols=76  Identities=20%  Similarity=0.226  Sum_probs=51.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +++++|.|+++++|.++++.....|++|+.+.++.++.+.+ .+++..  .+ .|..+. . .+.+....  .+.+|+++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~--~v-~~~~~~-~-~~~~~~~~--~~~~d~vl  218 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAK--EV-IPREEL-Q-EESIKPLE--KQRWAGAV  218 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCC--EE-EcchhH-H-HHHHHhhc--cCCcCEEE
Confidence            57999999999999999998888999999999988776665 445431  11 222222 1 12222221  23689998


Q ss_pred             eCCc
Q psy12833         84 NCAG   87 (254)
Q Consensus        84 ~~ag   87 (254)
                      .+.|
T Consensus       219 d~~g  222 (326)
T cd08289         219 DPVG  222 (326)
T ss_pred             ECCc
Confidence            8765

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.61  E-value=0.02  Score=45.15  Aligned_cols=36  Identities=14%  Similarity=0.265  Sum_probs=33.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      ++||.+||.|| |.+|...++.|.+.|++|++++++.
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            57999999999 8999999999999999999998764

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.60  E-value=0.011  Score=49.86  Aligned_cols=33  Identities=21%  Similarity=0.281  Sum_probs=29.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPT   38 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~   38 (254)
                      ++.|+|++|.+|..++..|+..|.  +|++++|+.
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            689999999999999999999986  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.59  E-value=0.024  Score=47.98  Aligned_cols=146  Identities=16%  Similarity=0.150  Sum_probs=81.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhC--CC---c-eEEecCCCCHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELG--PD---V-KFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~--~~---~-~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      .+.+++.|+|| |.+|..++..++..| +++++.+++.+.++...-++.  ..   . ..+.+ .+|.+    .+     
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~~----~l-----   71 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNYE----DI-----   71 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCHH----Hh-----
Confidence            46789999998 889999999999888 689999998765432221110  00   0 11111 11221    22     


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-  153 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-  153 (254)
                        ..-|++|.++|......         ++   ..+.+..|.    .+.+.+.+.+.+..     +++.++++|-.... 
T Consensus        72 --~~ADiVVitag~~~~~g---------~~---r~dll~~n~----~i~~~i~~~i~~~~-----p~a~vivvsNP~di~  128 (319)
T PTZ00117         72 --KDSDVVVITAGVQRKEE---------MT---REDLLTING----KIMKSVAESVKKYC-----PNAFVICVTNPLDCM  128 (319)
T ss_pred             --CCCCEEEECCCCCCCCC---------CC---HHHHHHHHH----HHHHHHHHHHHHHC-----CCeEEEEecChHHHH
Confidence              26799999998643221         22   233455555    45566666666553     15667777654322 


Q ss_pred             -------cCCCCCccchhch-HHHHHhHHHHHHHhc
Q psy12833        154 -------EGQSGQVAYSASK-SGIVGMTLPMARDLA  181 (254)
Q Consensus       154 -------~~~~~~~~Y~~sK-~a~~~~~~~la~e~~  181 (254)
                             .+.|.....+..- .--..+.+.+++.+.
T Consensus       129 t~~~~~~s~~p~~rviG~gt~lds~R~~~~la~~l~  164 (319)
T PTZ00117        129 VKVFQEKSGIPSNKICGMAGVLDSSRFRCNLAEKLG  164 (319)
T ss_pred             HHHHHHhhCCCcccEEEecchHHHHHHHHHHHHHhC
Confidence                   2233333344441 112245666776653

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.59  E-value=0.0095  Score=50.03  Aligned_cols=79  Identities=18%  Similarity=0.201  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.+++|.|+++++|.++++.+...|++++.+.++.++.+.+ ++++..   ...|..+.+..++ +.+... ..++|++
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~-~~~~~~-~~~~d~v  211 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGAD---EVIDSSPEDLAQR-VKEATG-GAGARLA  211 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCC---EEecccchhHHHH-HHHHhc-CCCceEE
Confidence            467999999999999999999889999999988887766555 445431   1122222222222 222211 1269999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       212 l~~~g  216 (323)
T cd05282         212 LDAVG  216 (323)
T ss_pred             EECCC
Confidence            98876

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.57  E-value=0.0091  Score=49.70  Aligned_cols=77  Identities=21%  Similarity=0.213  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      +|.+++|.|+++++|.++++.+...|++|+.+.++.++.+.+ .+++... .+.  ..+.+..+    .+....  .++|
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~-~~~--~~~~~~~~----~~~~~~~~~~~d  207 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADH-VIN--YRDEDFVE----RVREITGGRGVD  207 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCE-EEe--CCchhHHH----HHHHHcCCCCee
Confidence            578999999999999999998889999999988877766655 4454321 222  12222222    222222  2599


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      .++++.+
T Consensus       208 ~vl~~~~  214 (320)
T cd05286         208 VVYDGVG  214 (320)
T ss_pred             EEEECCC
Confidence            9998876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.57  E-value=0.084  Score=44.75  Aligned_cols=121  Identities=19%  Similarity=0.177  Sum_probs=70.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |.+.+++.|+|+ |.+|..++..++..|. .|++++++++.++...-.+       +........  +|.+    .    
T Consensus         3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~~----~----   71 (321)
T PTZ00082          3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNYE----D----   71 (321)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCHH----H----
Confidence            677789999996 8899999999999995 8999999887542111111       111222211  2221    1    


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                         +..-|++|.++|........+      .+++. .+.+..|.    .+.+.+.+.+.+..+     ++.++++|-..
T Consensus        72 ---l~~aDiVI~tag~~~~~~~~~------~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p-----~a~~iv~sNP~  131 (321)
T PTZ00082         72 ---IAGSDVVIVTAGLTKRPGKSD------KEWNR-DDLLPLNA----KIMDEVAEGIKKYCP-----NAFVIVITNPL  131 (321)
T ss_pred             ---hCCCCEEEECCCCCCCCCCCc------CCCCH-HHHHHHHH----HHHHHHHHHHHHHCC-----CeEEEEecCcH
Confidence               236899999999754321111      11121 33344443    356666666666541     45777776544

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.55  E-value=0.017  Score=48.31  Aligned_cols=76  Identities=22%  Similarity=0.305  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.+++|.|+++++|.++++.....|++|+.+.++.++.+.+ .+++.  ..+.-+  +.+ ..+.+.+.   ..++|++
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~--~~~~~~--~~~-~~~~i~~~---~~~~d~v  212 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGA--DEVVID--DGA-IAEQLRAA---PGGFDKV  212 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC--cEEEec--Ccc-HHHHHHHh---CCCceEE
Confidence            578999999999999999998889999999988887665554 44543  222112  211 22222222   2369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       213 l~~~~  217 (320)
T cd08243         213 LELVG  217 (320)
T ss_pred             EECCC
Confidence            98876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02740 Alcohol dehydrogenase-like

Probab=96.54  E-value=0.015  Score=50.45  Aligned_cols=79  Identities=23%  Similarity=0.334  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-HHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-EDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~id   80 (254)
                      .|.++||.|+ +++|...++.+...|+ +|+.++++.++++.. .+++... ++  |..+. +...+.+.++..  +.+|
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~-~i--~~~~~~~~~~~~v~~~~~--~g~d  270 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGITD-FI--NPKDSDKPVHERIREMTG--GGVD  270 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCCcE-EE--ecccccchHHHHHHHHhC--CCCC
Confidence            4789999996 8999999998888898 699999988776655 4555422 22  33322 123333333322  2699


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|.++|.
T Consensus       271 vvid~~G~  278 (381)
T PLN02740        271 YSFECAGN  278 (381)
T ss_pred             EEEECCCC
Confidence            99999883

>PRK08328 hypothetical protein; Provisional

Probab=96.54  E-value=0.03  Score=45.07  Aligned_cols=42  Identities=31%  Similarity=0.359  Sum_probs=34.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESV   44 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~   44 (254)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++.+.-+..++
T Consensus        25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL   67 (231)
T PRK08328         25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNL   67 (231)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhh
Confidence            45788999998 7999999999999997 688888876554444

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.53  E-value=0.0072  Score=45.58  Aligned_cols=45  Identities=22%  Similarity=0.414  Sum_probs=35.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK   46 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~   46 (254)
                      ++||+++|.|.|.-+|+-++..|.++|++|.++.+..+.+++..+
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~   78 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR   78 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence            579999999999999999999999999999998887766665543

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.53  E-value=0.022  Score=48.91  Aligned_cols=36  Identities=25%  Similarity=0.312  Sum_probs=31.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      |++++|+|.|+ ||+|..+++.|+..|. ++++++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            46789999998 8999999999999997 788887764

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.52  E-value=0.018  Score=49.73  Aligned_cols=78  Identities=23%  Similarity=0.378  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-HHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-EDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~id   80 (254)
                      .|.++||.|+ +++|...++.+...|+ +|+.++++.++.+.+ .+++... +  .|..+. ++..+.+.++..  +++|
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~-~--i~~~~~~~~~~~~v~~~~~--~g~d  258 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATD-C--VNPKDHDKPIQQVLVEMTD--GGVD  258 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCE-E--EcccccchHHHHHHHHHhC--CCCc
Confidence            4789999985 8999999998888899 699999988877655 4565422 1  233332 234444444332  3799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      +++.+.|
T Consensus       259 ~vid~~g  265 (368)
T cd08300         259 YTFECIG  265 (368)
T ss_pred             EEEECCC
Confidence            9999877

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.51  E-value=0.022  Score=48.77  Aligned_cols=46  Identities=30%  Similarity=0.432  Sum_probs=38.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP   50 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   50 (254)
                      .|.+++|.|+ +++|...++.+...|++|+++++++++.+.+ .+++.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga  211 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGA  211 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCC
Confidence            4789999999 9999999998888899999999988877655 55554

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02494 adenosylhomocysteinase

Probab=96.51  E-value=0.019  Score=50.68  Aligned_cols=41  Identities=22%  Similarity=0.422  Sum_probs=35.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE   42 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~   42 (254)
                      ++.||+++|.|. |.||+.+++.+...|++|+++++++.+..
T Consensus       251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~  291 (477)
T PLN02494        251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICAL  291 (477)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhH
Confidence            468999999998 59999999999999999999998876543

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.50  E-value=0.014  Score=48.62  Aligned_cols=78  Identities=21%  Similarity=0.221  Sum_probs=54.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||+++|.|-++-+|+.++..|.++|++|+++.+....+++..+    +...+.+-+.++..++..+       -+...
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~----~ADIVIsavg~~~~v~~~~-------lk~Ga  224 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCR----RADILVAAVGRPEMVKGDW-------IKPGA  224 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHh----cCCEEEEecCChhhcchhe-------ecCCC
Confidence            579999999999999999999999999999999533334444433    3445556666766555544       14455


Q ss_pred             EEeCCccCC
Q psy12833         82 NVNCAGISC   90 (254)
Q Consensus        82 li~~ag~~~   90 (254)
                      +|...|+..
T Consensus       225 vVIDvGin~  233 (296)
T PRK14188        225 TVIDVGINR  233 (296)
T ss_pred             EEEEcCCcc
Confidence            666667643

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.50  E-value=0.011  Score=49.29  Aligned_cols=79  Identities=23%  Similarity=0.236  Sum_probs=51.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.+++|+|+++++|.+++..+...|+.|+.+.++.++.+.+ .+.+... .+.  ..+.+..+.+ ..... ...+|.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~-~~~--~~~~~~~~~i-~~~~~-~~~~d~v  212 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGADH-VID--YRDPDLRERV-KALTG-GRGVDVV  212 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCce-eee--cCCccHHHHH-HHHcC-CCCcEEE
Confidence            578999999999999999999999999999998887665554 3343221 122  1222222222 22211 1258999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +++.|
T Consensus       213 ~~~~g  217 (323)
T cd08241         213 YDPVG  217 (323)
T ss_pred             EECcc
Confidence            98876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.50  E-value=0.013  Score=49.38  Aligned_cols=142  Identities=14%  Similarity=0.058  Sum_probs=81.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHH-----HHHHHHcCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAV-----LLCKDSFGK   78 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~-----~~~~~~~~~   78 (254)
                      ++.|+|++|.+|.+++..|+..+.  +++++++++..             ....|+.+........     ++..+.+..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-------------g~a~DL~~~~~~~~i~~~~~~~~~~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-------------GVAADLSHIPTAASVKGFSGEEGLENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-------------EEEchhhcCCcCceEEEecCCCchHHHcCC
Confidence            478999999999999999998875  79999987622             1222332211000000     001223347


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-----
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-----  153 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-----  153 (254)
                      -|++|..+|.....            -.+-.+.+..|+.    +.+...+.+.+..+     ++.++++|--...     
T Consensus        68 aDivvitaG~~~~~------------g~~R~dll~~N~~----I~~~i~~~i~~~~p-----~~iiivvsNPvDv~~~i~  126 (312)
T TIGR01772        68 ADVVVIPAGVPRKP------------GMTRDDLFNVNAG----IVKDLVAAVAESCP-----KAMILVITNPVNSTVPIA  126 (312)
T ss_pred             CCEEEEeCCCCCCC------------CccHHHHHHHhHH----HHHHHHHHHHHhCC-----CeEEEEecCchhhHHHHH
Confidence            89999999975322            1223344555654    55555666655432     5778888776532     


Q ss_pred             -------cCCCCCccchhchHHHHHhHHHHHHHhc
Q psy12833        154 -------EGQSGQVAYSASKSGIVGMTLPMARDLA  181 (254)
Q Consensus       154 -------~~~~~~~~Y~~sK~a~~~~~~~la~e~~  181 (254)
                             .++|.....+.+-.=...|-..+++++.
T Consensus       127 t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l~  161 (312)
T TIGR01772       127 AEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELKG  161 (312)
T ss_pred             HHHHHHhcCCChHHEEeeecchHHHHHHHHHHHhC
Confidence                   1344433455542222346667777763

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.50  E-value=0.02  Score=49.42  Aligned_cols=78  Identities=23%  Similarity=0.395  Sum_probs=52.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCC-HHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-EEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id   80 (254)
                      .|.++||+|+ +++|...++.+...|+ +|+.++++.++.+.+ .+++...   ..|..+ .+++.+.+.++..  +++|
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~---~i~~~~~~~~~~~~v~~~~~--~g~d  257 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATD---CVNPNDYDKPIQEVIVEITD--GGVD  257 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCe---EEcccccchhHHHHHHHHhC--CCCC
Confidence            4789999986 8999999888778898 799998887776655 4555422   123332 1223333333322  3799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       258 ~vid~~G  264 (368)
T TIGR02818       258 YSFECIG  264 (368)
T ss_pred             EEEECCC
Confidence            9999987

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.48  E-value=0.026  Score=48.78  Aligned_cols=35  Identities=29%  Similarity=0.423  Sum_probs=31.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~   37 (254)
                      +++++|+|.|+ ||+|..++..|+..|. ++++++.+
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45788999998 8999999999999996 88888876

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.48  E-value=0.015  Score=51.44  Aligned_cols=40  Identities=25%  Similarity=0.380  Sum_probs=35.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG   41 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~   41 (254)
                      ++.||+++|.|.+ .||+.+++.|...|++|+++.+++...
T Consensus       251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            3689999999986 599999999999999999998876654

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.47  E-value=0.05  Score=48.79  Aligned_cols=77  Identities=18%  Similarity=0.131  Sum_probs=51.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++++++|.|+ |++|.++|+.|.++|++|++++++.. ......+.+ ...+.++..+-..             .....
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------------~~~~~   79 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------------LPEDT   79 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------------ccCCC
Confidence            46789999997 78999999999999999999986543 222222333 2234444332111             01358


Q ss_pred             cEEEeCCccCCCc
Q psy12833         80 DVNVNCAGISCAF   92 (254)
Q Consensus        80 d~li~~ag~~~~~   92 (254)
                      |.+|...|+....
T Consensus        80 D~Vv~s~Gi~~~~   92 (480)
T PRK01438         80 DLVVTSPGWRPDA   92 (480)
T ss_pred             CEEEECCCcCCCC
Confidence            9999999976443

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.46  E-value=0.0091  Score=49.38  Aligned_cols=37  Identities=16%  Similarity=0.315  Sum_probs=34.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      ++||+++|+|.|.-+|+-++..|.++|++|+++.++.
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            5799999999999999999999999999999988754

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.46  E-value=0.015  Score=39.67  Aligned_cols=42  Identities=24%  Similarity=0.407  Sum_probs=35.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC---CEEEEe-eCCCchhHHHHHHhC
Q psy12833          7 GLVTGGASGLGKATVERIVREG---GRVVLC-DLPTSEGESVAKELG   49 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g---~~v~~~-~r~~~~~~~~~~~~~   49 (254)
                      +.|. |+|.+|.++++.|.+.|   .+|+++ .|++++.+++.++.+
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            3444 66999999999999999   899955 999999998888764

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.45  E-value=0.016  Score=50.53  Aligned_cols=43  Identities=23%  Similarity=0.419  Sum_probs=37.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA   45 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~   45 (254)
                      +.|++++|.|+ |.||+.+++.+...|++|+++++++.+++...
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~  242 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA  242 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence            57999999999 58999999999999999999999877765543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.43  E-value=0.016  Score=51.41  Aligned_cols=75  Identities=21%  Similarity=0.262  Sum_probs=58.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      .++++|.|+ |.+|+.+++.|.+.|++|++++++++..+++.++. ..+.++..|.++++.++++-      ..+.|.+|
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-~~~~~i~gd~~~~~~L~~~~------~~~a~~vi  302 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-PNTLVLHGDGTDQELLEEEG------IDEADAFI  302 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-CCCeEEECCCCCHHHHHhcC------CccCCEEE
Confidence            478999999 99999999999999999999999988777766543 35678899999887654432      13678777


Q ss_pred             eCC
Q psy12833         84 NCA   86 (254)
Q Consensus        84 ~~a   86 (254)
                      .+.
T Consensus       303 ~~~  305 (453)
T PRK09496        303 ALT  305 (453)
T ss_pred             ECC
Confidence            553

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.42  E-value=0.041  Score=46.61  Aligned_cols=118  Identities=18%  Similarity=0.106  Sum_probs=65.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCCC--chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG-------RVVLCDLPT--SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      -++.|+|++|.+|.+++..|...|.       ++++.+.+.  +.++-...++..-.....-+..    +.   ..-.+.
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~----i~---~~~~~~   76 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV----AT---TDPEEA   76 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE----Ee---cChHHH
Confidence            3689999999999999999998874       799999864  2233332222111100000100    00   111222


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      +..-|++|..||.....            -++-.+.+..|.    .+.+.+.+.+.+..+    +++.++++|-
T Consensus        77 ~~daDvVVitAG~~~k~------------g~tR~dll~~Na----~i~~~i~~~i~~~~~----~~~iiivvsN  130 (323)
T TIGR01759        77 FKDVDAALLVGAFPRKP------------GMERADLLSKNG----KIFKEQGKALNKVAK----KDVKVLVVGN  130 (323)
T ss_pred             hCCCCEEEEeCCCCCCC------------CCcHHHHHHHHH----HHHHHHHHHHHhhCC----CCeEEEEeCC
Confidence            33689999999974321            122344455554    345555666665531    0467777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=96.38  E-value=0.032  Score=47.48  Aligned_cols=75  Identities=25%  Similarity=0.399  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.+++|+|+++++|.++++.....|++|+.+.++ ++ .+..++++..   ...|..+.+..+.+.    . .+.+|++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~g~~---~~~~~~~~~~~~~l~----~-~~~vd~v  231 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSLGAD---DVIDYNNEDFEEELT----E-RGKFDVI  231 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHhCCc---eEEECCChhHHHHHH----h-cCCCCEE
Confidence            48899999999999999999888899999887764 33 3344555432   122333333333322    2 2479999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       232 i~~~g  236 (350)
T cd08248         232 LDTVG  236 (350)
T ss_pred             EECCC
Confidence            98876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.38  E-value=0.022  Score=48.03  Aligned_cols=78  Identities=22%  Similarity=0.313  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      +|.+++|.|+++++|.++++.+.+.|++++++.++.++.+.+ .+++.. .++  +..+.+.   +.+.+.+..  .++|
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~---~~~~~~~~~~~~~~d  212 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAI-ILI--RYPDEEG---FAPKVKKLTGEKGVN  212 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc-EEE--ecCChhH---HHHHHHHHhCCCCce
Confidence            467999999999999999999999999988888887766665 445432 122  2222221   222222222  2589


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      +++.+.|
T Consensus       213 ~~i~~~~  219 (334)
T PTZ00354        213 LVLDCVG  219 (334)
T ss_pred             EEEECCc
Confidence            9998865

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.37  E-value=0.028  Score=48.43  Aligned_cols=78  Identities=27%  Similarity=0.403  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-HHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-EDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~id   80 (254)
                      +|.++||.|+ +++|...++.+...|+ +|+.++++.++.+.+ ++++... ++  |..+. +++.+.+.++..  +.+|
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~-~i--~~~~~~~~~~~~v~~~~~--~~~d  259 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTE-FV--NPKDHDKPVQEVIAEMTG--GGVD  259 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCce-EE--cccccchhHHHHHHHHhC--CCCC
Confidence            4789999986 8999998888878898 799999988776655 4555321 12  22221 234444444332  2699


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      +++.+.|
T Consensus       260 ~vid~~G  266 (369)
T cd08301         260 YSFECTG  266 (369)
T ss_pred             EEEECCC
Confidence            9999876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.37  E-value=0.021  Score=45.80  Aligned_cols=35  Identities=20%  Similarity=0.372  Sum_probs=32.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC---EEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG---RVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~---~v~~~~r~   37 (254)
                      +++++++|.|+ |+.|++++..|.+.|.   ++++++|+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            46789999999 9999999999999997   49999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.36  E-value=0.042  Score=43.37  Aligned_cols=56  Identities=16%  Similarity=0.245  Sum_probs=42.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHhCCCceEEecCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKELGPDVKFAPVDVT   60 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dls   60 (254)
                      ++||++||.|| |.+|..-++.|.+.|++|++++.+.. .++++.++  .++.++.-+..
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~--~~i~~~~~~~~   63 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQ--GGITWLARCFD   63 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHc--CCEEEEeCCCC
Confidence            57999999998 78899999999999999999987654 33333322  36777776654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.36  E-value=0.02  Score=39.87  Aligned_cols=36  Identities=25%  Similarity=0.389  Sum_probs=31.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      ++||++||+|+ |.+|..=++.|.+.|++|++++...
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            57999999999 9999999999999999999999875

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.35  E-value=0.023  Score=49.82  Aligned_cols=83  Identities=13%  Similarity=0.171  Sum_probs=50.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC---EEEEeeCCCchhHHHHHHhCC-----CceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG---RVVLCDLPTSEGESVAKELGP-----DVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |.+++|.|++|++|...++.+...|+   +|++++++.++++...+..+.     .......|..+.++..+.+.++.. 
T Consensus       176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~-  254 (410)
T cd08238         176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG-  254 (410)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC-
Confidence            67999999999999998876656554   799999988877765442211     112122333322223333332221 


Q ss_pred             cCCCcEEEeCCc
Q psy12833         76 FGKLDVNVNCAG   87 (254)
Q Consensus        76 ~~~id~li~~ag   87 (254)
                      ..++|++|.++|
T Consensus       255 g~g~D~vid~~g  266 (410)
T cd08238         255 GQGFDDVFVFVP  266 (410)
T ss_pred             CCCCCEEEEcCC
Confidence            125899998876

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.34  E-value=0.026  Score=48.49  Aligned_cols=81  Identities=25%  Similarity=0.266  Sum_probs=49.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|+++||+| ++++|.++++.+...|+ +|+++++++++.+.+ .+++... ++..+-.+.....+.+.+... ..++|+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~-vi~~~~~~~~~~~~~i~~~~~-~~~~d~  252 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGADA-TIDIDELPDPQRRAIVRDITG-GRGADV  252 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCCe-EEcCcccccHHHHHHHHHHhC-CCCCcE
Confidence            578999997 59999999988888899 899888877665544 4454321 221111111111122222211 126999


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      ++.+.|
T Consensus       253 vid~~g  258 (361)
T cd08231         253 VIEASG  258 (361)
T ss_pred             EEECCC
Confidence            999876

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.34  E-value=0.0097  Score=43.10  Aligned_cols=84  Identities=15%  Similarity=0.162  Sum_probs=53.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh-----------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL-----------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~-----------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      ++-|.|+ |.+|.++++.|.+.|++|..+ +|+.+..++....+           -.....+-+-+.| +.+..+.+++.
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~La   89 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQLA   89 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHHHH
Confidence            6788888 899999999999999998765 56665555555433           1233444454555 47888888887


Q ss_pred             HH--cCCCcEEEeCCccCCC
Q psy12833         74 DS--FGKLDVNVNCAGISCA   91 (254)
Q Consensus        74 ~~--~~~id~li~~ag~~~~   91 (254)
                      ..  ..+=.+++||.|....
T Consensus        90 ~~~~~~~g~iVvHtSGa~~~  109 (127)
T PF10727_consen   90 QYGAWRPGQIVVHTSGALGS  109 (127)
T ss_dssp             CC--S-TT-EEEES-SS--G
T ss_pred             HhccCCCCcEEEECCCCChH
Confidence            75  3344699999997543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.32  E-value=0.026  Score=48.88  Aligned_cols=74  Identities=23%  Similarity=0.326  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.+++|.|+ +++|...++.....|++|++++++.++..+..++++... +  .|..+.+.+.       +..+++|++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~-~--i~~~~~~~v~-------~~~~~~D~v  246 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADS-F--LVTTDSQKMK-------EAVGTMDFI  246 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcE-E--EcCcCHHHHH-------HhhCCCcEE
Confidence            4789999986 899999999888889999988887665445555565421 1  2323322222       222468999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.++|
T Consensus       247 id~~G  251 (375)
T PLN02178        247 IDTVS  251 (375)
T ss_pred             EECCC
Confidence            99877

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.30  E-value=0.033  Score=49.27  Aligned_cols=43  Identities=33%  Similarity=0.434  Sum_probs=36.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL   48 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   48 (254)
                      ++.|+||+|.+|.+++..|.+.|++|++++|+.+...+...+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~   44 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL   44 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc
Confidence            6899999999999999999999999999999877655544443

>PRK14968 putative methyltransferase; Provisional

Probab=96.30  E-value=0.048  Score=42.01  Aligned_cols=73  Identities=22%  Similarity=0.189  Sum_probs=49.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCC---ceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPD---VKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~---~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++++|-.|++.|.   ++..|++++.+|+.++++++..+...+.+   +.+   +.++.+|+.+.         ..+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--
Confidence            56789999976665   45555556899999999877665554433   222   77888887442         111  


Q ss_pred             CCCcEEEeCCccC
Q psy12833         77 GKLDVNVNCAGIS   89 (254)
Q Consensus        77 ~~id~li~~ag~~   89 (254)
                      ..+|.++.|....
T Consensus        89 ~~~d~vi~n~p~~  101 (188)
T PRK14968         89 DKFDVILFNPPYL  101 (188)
T ss_pred             cCceEEEECCCcC
Confidence            1689999887654

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.29  E-value=0.18  Score=42.53  Aligned_cols=113  Identities=15%  Similarity=0.094  Sum_probs=68.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCC------CceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGP------DVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ..++.|+|+ |.+|.+++..|+..|.  ++++++.+.+.++-...++..      .......  +|++           .
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-----------~   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-----------V   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-----------H
Confidence            357899997 9999999999988874  799999988765544443311      1112211  2222           1


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      +...|++|.++|......         ++-   .+.+..|.    .+.+...+.+.+..     +++.++++|--.
T Consensus        69 ~~~adivvitaG~~~k~g---------~~R---~dll~~N~----~i~~~~~~~i~~~~-----p~~~vivvsNP~  123 (312)
T cd05293          69 TANSKVVIVTAGARQNEG---------ESR---LDLVQRNV----DIFKGIIPKLVKYS-----PNAILLVVSNPV  123 (312)
T ss_pred             hCCCCEEEECCCCCCCCC---------CCH---HHHHHHHH----HHHHHHHHHHHHhC-----CCcEEEEccChH
Confidence            236899999999753211         222   33344444    34555555555543     267888887544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.27  E-value=0.031  Score=42.90  Aligned_cols=32  Identities=25%  Similarity=0.373  Sum_probs=28.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      +++|.|+ ||+|..+++.|++.|. ++++++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3788886 8999999999999998 599999876

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.25  E-value=0.023  Score=49.02  Aligned_cols=76  Identities=26%  Similarity=0.339  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id   80 (254)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+ ++++... +  .|..+.+.    .+++.+.. +++|
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~-~--i~~~~~~~----~~~i~~~~~~g~d  261 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGATA-T--VNAGDPNA----VEQVRELTGGGVD  261 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCCce-E--eCCCchhH----HHHHHHHhCCCCC
Confidence            4789999985 8999998887778899 688888887776644 5555321 1  23333322    22222222 3699


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       262 ~vid~~G  268 (371)
T cd08281         262 YAFEMAG  268 (371)
T ss_pred             EEEECCC
Confidence            9999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.25  E-value=0.026  Score=48.36  Aligned_cols=74  Identities=18%  Similarity=0.297  Sum_probs=48.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC--chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT--SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      .|++++|+|+ |++|...++.+...|++|++++|+.  +...++.++++..  .+  |..+. +..+    . ...+.+|
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~--~v--~~~~~-~~~~----~-~~~~~~d  240 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGAT--YV--NSSKT-PVAE----V-KLVGEFD  240 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE--Ee--cCCcc-chhh----h-hhcCCCC
Confidence            5789999986 9999999987778899999999842  2233344555543  22  33322 2222    1 1224799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       241 ~vid~~g  247 (355)
T cd08230         241 LIIEATG  247 (355)
T ss_pred             EEEECcC
Confidence            9999987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.24  E-value=0.048  Score=44.16  Aligned_cols=42  Identities=29%  Similarity=0.349  Sum_probs=34.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESV   44 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~   44 (254)
                      +++++|+|.|+ ||+|..+++.|++.|. ++++++.+.-+..++
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL   64 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNL   64 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCc
Confidence            45778999988 8999999999999997 788888876544333

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.22  E-value=0.19  Score=41.39  Aligned_cols=230  Identities=17%  Similarity=0.124  Sum_probs=117.9

Q ss_pred             CcEEEEeCCCChHHHH--HHHHHHHcCCEEEEee--CCCc-------------hhHHHHHHhCCCceEEecCCCCHHHHH
Q psy12833          4 GVVGLVTGGASGLGKA--TVERIVREGGRVVLCD--LPTS-------------EGESVAKELGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         4 ~~~~lItGas~giG~a--~a~~l~~~g~~v~~~~--r~~~-------------~~~~~~~~~~~~~~~~~~Dls~~~~~~   66 (254)
                      .|+|||.|+|+|.|.+  |+..|- -|+..+.+.  |..+             ..++.+.+-+--..-+..|.-..+--+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            3899999999988875  444444 455544332  2111             122333333444566778887777788


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCCccccc---------------------c-------CCCCcCCHHHHHHHHHHHhHH
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCAFKIFN---------------------Y-------NKGTVHSLDDFKRILLVNTVG  118 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~---------------------~-------~~~~~~~~~~~~~~~~~n~~~  118 (254)
                      ..++.+++.+|++|.+|+.-+...+..+..                     .       ....-.+.+++.....+-=--
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe  199 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE  199 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcc
Confidence            888999999999999999876543322100                     0       000001222222222210000


Q ss_pred             HH-HHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC--CCccchhchHHHHHhHHHHHHHhccCCcEEEE-EecCC
Q psy12833        119 TF-NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS--GQVAYSASKSGIVGMTLPMARDLAGAGIRVNT-IAPGL  194 (254)
Q Consensus       119 ~~-~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~-v~Pg~  194 (254)
                      -+ .-+.+++..-.-..      ..+-+..|-+......|  ....-+.+|.=|+.-++.+...++..+-..+. |+-..
T Consensus       200 DWq~WidaLl~advlae------g~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKav  273 (398)
T COG3007         200 DWQMWIDALLEADVLAE------GAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAV  273 (398)
T ss_pred             hHHHHHHHHHhcccccc------CceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHH
Confidence            00 01122222111111      23445555544443322  23456899999999999999999887655543 33322


Q ss_pred             cccc------ccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccceEEec
Q psy12833        195 FDTP------LLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRID  248 (254)
Q Consensus       195 ~~t~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~  248 (254)
                      + |.      ++..+......-+       +.-+.-|-+.+.+..|.+..-..|+.+.+|
T Consensus       274 V-TqASsaIP~~plYla~lfkvM-------Kekg~HEgcIeQi~rlfse~ly~g~~~~~D  325 (398)
T COG3007         274 V-TQASSAIPMMPLYLAILFKVM-------KEKGTHEGCIEQIDRLFSEKLYSGSKIQLD  325 (398)
T ss_pred             H-hhhhhccccccHHHHHHHHHH-------HHcCcchhHHHHHHHHHHHHhhCCCCCCcC
Confidence            2 22      2211111122211       112344566666777776544446666665

>KOG0024|consensus

Probab=96.22  E-value=0.048  Score=45.46  Aligned_cols=83  Identities=27%  Similarity=0.298  Sum_probs=57.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|.++||.|| +.||......+-.-|+ +|++++-.+.+++..++ ++..+......-++++.+.+.++...... .+|+
T Consensus       169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~-~~d~  245 (354)
T KOG0024|consen  169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-FGATVTDPSSHKSSPQELAELVEKALGKK-QPDV  245 (354)
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-hCCeEEeeccccccHHHHHHHHHhhcccc-CCCe
Confidence            4789999999 7888877766667787 79999998888877655 77665544443334444444444443321 4999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      .|.|.|.
T Consensus       246 ~~dCsG~  252 (354)
T KOG0024|consen  246 TFDCSGA  252 (354)
T ss_pred             EEEccCc
Confidence            9999985

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.21  E-value=0.025  Score=48.61  Aligned_cols=76  Identities=20%  Similarity=0.300  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      .|.++||.|+ +++|.+.++.+...|++ |+.++++.++.+.+ ++++.. .++  |..+.+..    +.+.+..  .++
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~-~~i--~~~~~~~~----~~i~~~~~~~g~  246 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGAT-HTV--NSSGTDPV----EAIRALTGGFGA  246 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc-eEE--cCCCcCHH----HHHHHHhCCCCC
Confidence            4789999985 99999998887788985 88888887776655 455532 122  33332222    2222222  258


Q ss_pred             cEEEeCCc
Q psy12833         80 DVNVNCAG   87 (254)
Q Consensus        80 d~li~~ag   87 (254)
                      |++|.++|
T Consensus       247 d~vid~~g  254 (358)
T TIGR03451       247 DVVIDAVG  254 (358)
T ss_pred             CEEEECCC
Confidence            99999887

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.18  E-value=0.025  Score=48.08  Aligned_cols=79  Identities=32%  Similarity=0.366  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++.++||.|+++++|.++++.+.+.|++|+.+.+++++.+.+ ++++... +  .+..+.+..+++.+.. . ..++|++
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v--~~~~~~~~~~~~~~~~-~-~~~vd~v  238 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADA-F--VDFKKSDDVEAVKELT-G-GGGAHAV  238 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcE-E--EcCCCccHHHHHHHHh-c-CCCCCEE
Confidence            478999999999999999999999999999999987766654 4555221 1  2222323223322211 1 1369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +++.+
T Consensus       239 l~~~~  243 (341)
T cd08297         239 VVTAV  243 (341)
T ss_pred             EEcCC
Confidence            98655

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.15  E-value=0.011  Score=48.74  Aligned_cols=44  Identities=18%  Similarity=0.259  Sum_probs=38.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL   48 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   48 (254)
                      +++++|.|+ ||.+++++..|++.|+ +|+++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            468999997 9999999999999997 5999999999888887654

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.14  E-value=0.052  Score=48.15  Aligned_cols=77  Identities=17%  Similarity=0.176  Sum_probs=51.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch--hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE--GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +.+|+++|+|.+ ++|.++++.|+++|++|.+.+.+...  .+++ ++....+.++.....+ .    .+       ...
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l-~~~~~gi~~~~g~~~~-~----~~-------~~~   68 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPERVAQI-GKMFDGLVFYTGRLKD-A----LD-------NGF   68 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhHHHH-hhccCCcEEEeCCCCH-H----HH-------hCC
Confidence            468999999985 99999999999999999998875542  1221 1111244444433221 1    11       267


Q ss_pred             cEEEeCCccCCCc
Q psy12833         80 DVNVNCAGISCAF   92 (254)
Q Consensus        80 d~li~~ag~~~~~   92 (254)
                      |.||...|+....
T Consensus        69 d~vv~spgi~~~~   81 (445)
T PRK04308         69 DILALSPGISERQ   81 (445)
T ss_pred             CEEEECCCCCCCC
Confidence            9999999986443

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.13  E-value=0.038  Score=47.06  Aligned_cols=76  Identities=28%  Similarity=0.351  Sum_probs=49.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.+++|.|+++++|.++++.+...|++|+.+.++. +.+.+ .+++.. .+...+  + ....+ .. .. .-.++|++
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~-~~~g~~-~~~~~~--~-~~~~~-~~-~~-~~~~~d~v  247 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAV-RALGAD-TVILRD--A-PLLAD-AK-AL-GGEPVDVV  247 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHH-HhcCCe-EEEeCC--C-ccHHH-HH-hh-CCCCCcEE
Confidence            478999999999999999998889999998887654 44433 555543 222221  1 12222 11 11 11369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.+.|
T Consensus       248 i~~~g  252 (350)
T cd08274         248 ADVVG  252 (350)
T ss_pred             EecCC
Confidence            98876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.12  E-value=0.015  Score=46.48  Aligned_cols=42  Identities=21%  Similarity=0.367  Sum_probs=37.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE   47 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~   47 (254)
                      ++.|+||+|.+|.+++..|++.|++|++.+|++++.+.+..+
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            589999999999999999999999999999998877766553

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=96.11  E-value=0.084  Score=46.06  Aligned_cols=41  Identities=22%  Similarity=0.299  Sum_probs=35.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE   42 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~   42 (254)
                      ++.|++++|.|. |.||+.+++.+...|++|+++++++.+..
T Consensus       192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~  232 (406)
T TIGR00936       192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRAL  232 (406)
T ss_pred             CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHH
Confidence            367999999997 77999999999999999999998876543

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.10  E-value=0.13  Score=41.63  Aligned_cols=47  Identities=13%  Similarity=0.246  Sum_probs=35.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC---E-EEEeeCC-CchhHHHHHHh
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGG---R-VVLCDLP-TSEGESVAKEL   48 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~---~-v~~~~r~-~~~~~~~~~~~   48 (254)
                      ||+..++.|.|+ |.+|.+++..|.+.|.   + +++++|+ .++.+++.++.
T Consensus         1 ~m~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   52 (245)
T PRK07634          1 MLKKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARY   52 (245)
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHc
Confidence            788889999985 8899999999998873   3 6677774 45666655543

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.09  E-value=0.038  Score=48.69  Aligned_cols=112  Identities=12%  Similarity=0.069  Sum_probs=69.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-------CC--EEEEeeCCCchhHHHHHHhCCCc-----e-EEecCCCCHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE-------GG--RVVLCDLPTSEGESVAKELGPDV-----K-FAPVDVTSEEDVQKAV   69 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~-------g~--~v~~~~r~~~~~~~~~~~~~~~~-----~-~~~~Dls~~~~~~~~~   69 (254)
                      -++.|+|++|.+|.+++..|+..       |.  ++++++++.+.++-..-++.+-.     . .+..  .+.       
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~--~~y-------  171 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI--DPY-------  171 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec--CCH-------
Confidence            36899999999999999999988       64  79999999887765554442111     0 1111  121       


Q ss_pred             HHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-ccCCCCCCCcEEEEEe
Q psy12833         70 LLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHE-NKLNEDGLRGVIINTA  148 (254)
Q Consensus        70 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~~~~~~ii~vs  148 (254)
                          +.+..-|++|..+|......         ++   -.+.++.|.    -+.+...+.+.+ ..     +++.+|++|
T Consensus       172 ----e~~kdaDiVVitAG~prkpG---------~t---R~dLl~~N~----~I~k~i~~~I~~~a~-----p~~ivIVVs  226 (444)
T PLN00112        172 ----EVFQDAEWALLIGAKPRGPG---------ME---RADLLDING----QIFAEQGKALNEVAS-----RNVKVIVVG  226 (444)
T ss_pred             ----HHhCcCCEEEECCCCCCCCC---------CC---HHHHHHHHH----HHHHHHHHHHHHhcC-----CCeEEEEcC
Confidence                22237899999999743211         22   334455554    345555566655 22     167788777


Q ss_pred             cc
Q psy12833        149 SI  150 (254)
Q Consensus       149 s~  150 (254)
                      --
T Consensus       227 NP  228 (444)
T PLN00112        227 NP  228 (444)
T ss_pred             Cc
Confidence            53

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.09  E-value=0.098  Score=44.52  Aligned_cols=38  Identities=18%  Similarity=0.248  Sum_probs=33.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      ++|+++.|.|. |.||+++++.|...|++|+..+|+...
T Consensus       144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        144 VKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            57899999987 779999999999999999999987643

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=96.09  E-value=0.047  Score=47.66  Aligned_cols=46  Identities=30%  Similarity=0.354  Sum_probs=37.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG   49 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   49 (254)
                      +|.+++|+|+++++|.++++.+...|++++.+.++.++.+.+. +++
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g  234 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELG  234 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcC
Confidence            4689999999999999999888889999888877766655443 454

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.09  E-value=0.044  Score=46.49  Aligned_cols=75  Identities=24%  Similarity=0.356  Sum_probs=50.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|++++|.| ++.+|.++++.+...|++|+.++++.++.+.+ ++++.. +++  |..+.+ ..+.+.+.    +.+|++
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~-~~i--~~~~~~-~~~~~~~~----~~~d~v  232 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAH-HYI--DTSKED-VAEALQEL----GGAKLI  232 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCc-EEe--cCCCcc-HHHHHHhc----CCCCEE
Confidence            478999999 79999999998888899999999987776655 556542 122  222222 22222222    368999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       233 i~~~g  237 (333)
T cd08296         233 LATAP  237 (333)
T ss_pred             EECCC
Confidence            87755

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>KOG0023|consensus

Probab=96.08  E-value=0.043  Score=45.71  Aligned_cols=75  Identities=20%  Similarity=0.191  Sum_probs=52.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      -.|+.+-|+|+.| +|.--++.-.+.|++|++++++..+.++..+.++.....  .-..|++.++++.+.       .|.
T Consensus       180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv--~~~~d~d~~~~~~~~-------~dg  249 (360)
T KOG0023|consen  180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFV--DSTEDPDIMKAIMKT-------TDG  249 (360)
T ss_pred             CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeE--EecCCHHHHHHHHHh-------hcC
Confidence            3689999999977 887555544456999999999988888888877654332  222377877777663       355


Q ss_pred             EEeCC
Q psy12833         82 NVNCA   86 (254)
Q Consensus        82 li~~a   86 (254)
                      +++++
T Consensus       250 ~~~~v  254 (360)
T KOG0023|consen  250 GIDTV  254 (360)
T ss_pred             cceee
Confidence            55544

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=96.05  E-value=0.04  Score=36.93  Aligned_cols=34  Identities=41%  Similarity=0.679  Sum_probs=29.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDL   36 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r   36 (254)
                      +++++++|.|+ |+.|+.++..|.+. +.+|++.+|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            56899999999 99999999999998 567888776

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.03  E-value=0.032  Score=47.13  Aligned_cols=77  Identities=13%  Similarity=0.098  Sum_probs=47.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++++++||++++|.+.++.....|++|+.+.++.++.+.+. +++... ++.  ..+.+..+++ .+... ..++|++|.
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~-~i~--~~~~~~~~~v-~~~~~-~~~~d~vid  218 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEY-VLN--SSDPDFLEDL-KELIA-KLNATIFFD  218 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcE-EEE--CCCccHHHHH-HHHhC-CCCCcEEEE
Confidence            34444599999999998877788999999988877666553 454322 222  2222222222 22211 126999998


Q ss_pred             CCc
Q psy12833         85 CAG   87 (254)
Q Consensus        85 ~ag   87 (254)
                      +.|
T Consensus       219 ~~g  221 (324)
T cd08291         219 AVG  221 (324)
T ss_pred             CCC
Confidence            876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.02  E-value=0.31  Score=38.33  Aligned_cols=68  Identities=24%  Similarity=0.360  Sum_probs=45.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHhCC--------------CceEEecCCCCHHHHHHHHHH
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKELGP--------------DVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~--------------~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      ....||+|.||.+++++|++.|++|++.+|+.++ .+...++++.              .+.++..   -.+.+...+.+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAV---P~~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAV---PFEAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEec---cHHHHHhHHHH
Confidence            3445667999999999999999999998676554 4444444422              2222222   24667778888


Q ss_pred             HHHHcC
Q psy12833         72 CKDSFG   77 (254)
Q Consensus        72 ~~~~~~   77 (254)
                      +...++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            887665

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=96.02  E-value=0.051  Score=47.29  Aligned_cols=46  Identities=24%  Similarity=0.336  Sum_probs=37.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG   49 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   49 (254)
                      +|.+++|+|+++++|.+++..+...|++++.+.++.++.+.+ ++++
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~-~~~G  238 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC-RALG  238 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcC
Confidence            468999999999999999988888899988888877766555 4454

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PLN02602 lactate dehydrogenase

Probab=96.01  E-value=0.27  Score=42.18  Aligned_cols=111  Identities=15%  Similarity=0.097  Sum_probs=67.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCC------CceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGP------DVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++.|+|+ |.+|.+++..|+.++.  ++++++.+.+.++-...++..      ... +..+ .|.+       +    +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy~-------~----~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDYA-------V----T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCHH-------H----h
Confidence            68999997 9999999999998875  799999988765544443311      111 1111 1211       1    2


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      ..-|++|..||......         ++-   .+.+..|.    .+.+...+.+.+..     +++.++++|--
T Consensus       104 ~daDiVVitAG~~~k~g---------~tR---~dll~~N~----~I~~~i~~~I~~~~-----p~~ivivvtNP  156 (350)
T PLN02602        104 AGSDLCIVTAGARQIPG---------ESR---LNLLQRNV----ALFRKIIPELAKYS-----PDTILLIVSNP  156 (350)
T ss_pred             CCCCEEEECCCCCCCcC---------CCH---HHHHHHHH----HHHHHHHHHHHHHC-----CCeEEEEecCc
Confidence            36899999999753211         222   23344443    34555555555543     25778877753

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=96.00  E-value=0.034  Score=47.47  Aligned_cols=77  Identities=19%  Similarity=0.288  Sum_probs=48.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc-
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD-   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id-   80 (254)
                      .|++++|+|+ +++|.+.++.+...|++ |+.++++.++.+.+ ++++.. .++..+-.+.+.+.++   ...  .++| 
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~Ga~-~~i~~~~~~~~~~~~~---~~~--~~~d~  231 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSLGAM-QTFNSREMSAPQIQSV---LRE--LRFDQ  231 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCc-eEecCcccCHHHHHHH---hcC--CCCCe
Confidence            5789999975 99999999888888997 67788877776654 555532 2222221112222221   111  2577 


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|-++|
T Consensus       232 ~v~d~~G  238 (347)
T PRK10309        232 LILETAG  238 (347)
T ss_pred             EEEECCC
Confidence            8888877

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.00  E-value=0.043  Score=40.54  Aligned_cols=32  Identities=31%  Similarity=0.477  Sum_probs=27.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      +++|.|+ ||+|.++++.|++.|. ++++++.+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDT   33 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence            4788897 8999999999999998 688888763

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.98  E-value=0.087  Score=44.64  Aligned_cols=86  Identities=15%  Similarity=0.039  Sum_probs=55.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC----------CCceEEecCCCCHHHHHHHH-H
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG----------PDVKFAPVDVTSEEDVQKAV-L   70 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dls~~~~~~~~~-~   70 (254)
                      +++|++.|.|. |-+|.++++.|.+.|++|++..|+.++..+...+.+          .+..++.+-+-+. ....++ +
T Consensus        15 L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~-~~~~V~~~   92 (330)
T PRK05479         15 IKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDE-VQAEVYEE   92 (330)
T ss_pred             hCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHH-HHHHHHHH
Confidence            57899999987 579999999999999999888776554433333221          1223333333333 336666 5


Q ss_pred             HHHHHcCCCcEEEeCCccC
Q psy12833         71 LCKDSFGKLDVNVNCAGIS   89 (254)
Q Consensus        71 ~~~~~~~~id~li~~ag~~   89 (254)
                      ++.....+=.++++++|+.
T Consensus        93 ~I~~~Lk~g~iL~~a~G~~  111 (330)
T PRK05479         93 EIEPNLKEGAALAFAHGFN  111 (330)
T ss_pred             HHHhcCCCCCEEEECCCCC
Confidence            5655443335678888854

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.97  E-value=0.029  Score=47.31  Aligned_cols=79  Identities=15%  Similarity=0.144  Sum_probs=51.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.+++|.|+.+.+|.++++.+...|++|+.+.++.++.+.+ .+++.. .++..  .+.+ ..+.+.+.... ..+|++
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~-~~~~~--~~~~-~~~~~~~~~~~-~~~d~v  213 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAW-QVINY--REEN-IVERVKEITGG-KKVRVV  213 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCC-EEEcC--CCCc-HHHHHHHHcCC-CCeEEE
Confidence            478999999999999999988888999999888877766554 445432 22222  2222 11222222111 258999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.+
T Consensus       214 l~~~~  218 (327)
T PRK10754        214 YDSVG  218 (327)
T ss_pred             EECCc
Confidence            88765

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.95  E-value=0.049  Score=45.84  Aligned_cols=145  Identities=17%  Similarity=0.102  Sum_probs=79.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHhCC---CceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          6 VGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKELGP---DVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++.|+|++|.+|.+++..|+.+|  .++++++.+  .++-..-++..   ......+. .+ ++       +.+.+..-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~-------~y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EE-------LKKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cc-------hHHhcCCCC
Confidence            68899999999999999999888  479999987  21111111111   11111110 00 00       112234789


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-------
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-------  153 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-------  153 (254)
                      ++|.+||.....            -++-.+.++.|..=    .+...+.+.+..     +++.++++|--...       
T Consensus        71 ivvitaG~~~k~------------g~tR~dll~~N~~i----~~~i~~~i~~~~-----p~a~vivvtNPvDv~~~i~t~  129 (310)
T cd01337          71 VVVIPAGVPRKP------------GMTRDDLFNINAGI----VRDLATAVAKAC-----PKALILIISNPVNSTVPIAAE  129 (310)
T ss_pred             EEEEeCCCCCCC------------CCCHHHHHHHHHHH----HHHHHHHHHHhC-----CCeEEEEccCchhhHHHHHHH
Confidence            999999974321            12234445555544    344444444433     15788888876522       


Q ss_pred             -----cCCCCCccchhchHHHHHhHHHHHHHhcc
Q psy12833        154 -----EGQSGQVAYSASKSGIVGMTLPMARDLAG  182 (254)
Q Consensus       154 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  182 (254)
                           .++|.....+.+-.=-..|-..+++++.-
T Consensus       130 ~~~~~s~~p~~rviG~~~LDs~R~~~~la~~l~v  163 (310)
T cd01337         130 VLKKAGVYDPKRLFGVTTLDVVRANTFVAELLGL  163 (310)
T ss_pred             HHHHhcCCCHHHEEeeechHHHHHHHHHHHHhCc
Confidence                 23444345555432223466677777743

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.95  E-value=0.024  Score=46.88  Aligned_cols=39  Identities=23%  Similarity=0.458  Sum_probs=34.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      ++||+++|.|.|.-+|+-++..|.++|++|+++......
T Consensus       155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~  193 (285)
T PRK14191        155 IKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD  193 (285)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH
Confidence            579999999999999999999999999999988654433

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.95  E-value=0.056  Score=46.58  Aligned_cols=78  Identities=22%  Similarity=0.370  Sum_probs=50.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-HHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-EDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~id   80 (254)
                      .|.+++|.|+ +++|...++.....|+ +|+.++++.++.+.+ ++++.. .++  |..+. ..+.+.+.+...  +++|
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~~i--~~~~~~~~~~~~~~~~~~--~g~d  256 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGAT-DFI--NPKDSDKPVSEVIREMTG--GGVD  256 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCC-cEe--ccccccchHHHHHHHHhC--CCCC
Confidence            4789999975 9999999988778898 688888877766555 445532 112  22111 112222333322  4699


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.+.|
T Consensus       257 ~vid~~g  263 (365)
T cd08277         257 YSFECTG  263 (365)
T ss_pred             EEEECCC
Confidence            9999877

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.94  E-value=0.066  Score=46.31  Aligned_cols=78  Identities=22%  Similarity=0.364  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-HHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-EDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~id   80 (254)
                      +|.+++|.| .+++|.++++.+...|+ +|+.++++.++.+.+ .+++.. .++  +..+. +...+.+.+...  +++|
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~-~~i--~~~~~~~~~~~~v~~~~~--~~~d  262 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGAT-ECI--NPQDYKKPIQEVLTEMTD--GGVD  262 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc-eEe--cccccchhHHHHHHHHhC--CCCe
Confidence            478999996 58999999998889999 799999888776666 445532 112  22221 122333333322  4699


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      +++.+.|
T Consensus       263 ~vld~~g  269 (373)
T cd08299         263 FSFEVIG  269 (373)
T ss_pred             EEEECCC
Confidence            9999877

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.92  E-value=0.034  Score=47.49  Aligned_cols=76  Identities=26%  Similarity=0.474  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      +|++++|+|+ +++|.+.++.+...|+ +|++++++.++.+.+ .+++...   ..|..+.+    +.+++.+..  +++
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~---~i~~~~~~----~~~~l~~~~~~~~~  242 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATI---VLDPTEVD----VVAEVRKLTGGGGV  242 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE---EECCCccC----HHHHHHHHhCCCCC
Confidence            5789999985 8999999998889999 788888877766544 4454321   12333333    222333322  249


Q ss_pred             cEEEeCCc
Q psy12833         80 DVNVNCAG   87 (254)
Q Consensus        80 d~li~~ag   87 (254)
                      |++|.+.|
T Consensus       243 d~vid~~g  250 (351)
T cd08233         243 DVSFDCAG  250 (351)
T ss_pred             CEEEECCC
Confidence            99999887

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.92  E-value=0.021  Score=48.91  Aligned_cols=36  Identities=11%  Similarity=0.112  Sum_probs=28.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCch
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSE   40 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~   40 (254)
                      .++.|.||||.+|+.+++.|.++ +++++.+.++.+.
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~   39 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSA   39 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcccc
Confidence            58999999999999999999977 6787665554333

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.92  E-value=0.019  Score=44.40  Aligned_cols=41  Identities=24%  Similarity=0.277  Sum_probs=34.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE   47 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~   47 (254)
                      +|.|.|+ |-+|+.++..++..|++|++.+++++.+++..+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            4778898 9999999999999999999999998877666554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.90  E-value=0.11  Score=43.79  Aligned_cols=37  Identities=11%  Similarity=0.015  Sum_probs=32.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      ++||++.|.|- |.||+++++.|...|++|+..+|+.+
T Consensus       134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            57899999986 88999999999999999999887654

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=95.90  E-value=0.065  Score=45.31  Aligned_cols=76  Identities=17%  Similarity=0.167  Sum_probs=49.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      |.++||+|+++++|.++++..... |++|+.+.++.++.+.+ .+++... ++.-+  +  +..+.+.+.  ..+++|++
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~-~~~~~--~--~~~~~i~~~--~~~~vd~v  220 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHH-VIDHS--K--PLKAQLEKL--GLEAVSYV  220 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCE-EEECC--C--CHHHHHHHh--cCCCCCEE
Confidence            789999999999999988765556 99999998877766555 4555321 22211  1  122222222  11369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.+
T Consensus       221 l~~~~  225 (336)
T TIGR02817       221 FSLTH  225 (336)
T ss_pred             EEcCC
Confidence            87653

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.90  E-value=0.12  Score=44.00  Aligned_cols=38  Identities=18%  Similarity=0.178  Sum_probs=34.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      +.||++.|.|- |.||+.+++.|...|++|+..+|+...
T Consensus       148 L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        148 VYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            57899999998 999999999999999999999987543

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.90  E-value=0.059  Score=45.70  Aligned_cols=82  Identities=18%  Similarity=0.230  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc---hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS---EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +|+++||.|+++++|.++++.+...|++|+.+.++.+   ...+...+++....+...+.+ .++..+.+.....  +++
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~--~~~  222 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLLATELLKSAPG--GRP  222 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-cccHHHHHHHHcC--CCc
Confidence            5789999999999999999988899999988887653   222233444432221111110 0022222222221  268


Q ss_pred             cEEEeCCc
Q psy12833         80 DVNVNCAG   87 (254)
Q Consensus        80 d~li~~ag   87 (254)
                      |+++.+.|
T Consensus       223 d~vld~~g  230 (341)
T cd08290         223 KLALNCVG  230 (341)
T ss_pred             eEEEECcC
Confidence            99998877

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.89  E-value=0.024  Score=51.87  Aligned_cols=70  Identities=16%  Similarity=0.152  Sum_probs=54.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      .++|.|+ |.+|+.++++|.++|.++++++.++++.++..+   .....+.+|.+|++.++++--      .+.|.++..
T Consensus       419 hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~---~g~~~i~GD~~~~~~L~~a~i------~~a~~viv~  488 (558)
T PRK10669        419 HALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE---RGIRAVLGNAANEEIMQLAHL------DCARWLLLT  488 (558)
T ss_pred             CEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---CCCeEEEcCCCCHHHHHhcCc------cccCEEEEE
Confidence            4667766 899999999999999999999999888777754   357889999999886554211      256766654

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.86  E-value=0.028  Score=47.24  Aligned_cols=34  Identities=29%  Similarity=0.442  Sum_probs=28.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCch
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSE   40 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~   40 (254)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++.+.-+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve   35 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTID   35 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcc
Confidence            3788887 8999999999999997 68888876543

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14851 hypothetical protein; Provisional

Probab=95.86  E-value=0.031  Score=52.00  Aligned_cols=35  Identities=26%  Similarity=0.389  Sum_probs=30.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~   37 (254)
                      +++++|+|.|+ ||+|..++..|+..|. ++++++.+
T Consensus        41 L~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D   76 (679)
T PRK14851         41 LAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFD   76 (679)
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            46789999996 8999999999999997 67777765

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.86  E-value=0.039  Score=45.94  Aligned_cols=47  Identities=30%  Similarity=0.409  Sum_probs=39.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP   50 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   50 (254)
                      .|.+++|.|+++++|.++++.+...|++|+.+.++.++.+.+.+ ++.
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~  178 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGA  178 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC
Confidence            47899999999999999999999999999999887766655543 543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.81  E-value=0.039  Score=45.67  Aligned_cols=76  Identities=22%  Similarity=0.226  Sum_probs=47.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|++++|.|+ +++|...++.+...|++ |++++++.++.+ +.++++...   ..|..+.   .+.+.++.. ...+|+
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~-~a~~~Ga~~---~i~~~~~---~~~~~~~~~-~~g~d~  190 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE-LALSFGATA---LAEPEVL---AERQGGLQN-GRGVDV  190 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCcE---ecCchhh---HHHHHHHhC-CCCCCE
Confidence            5789999987 89999998887788986 888877766654 345554321   1122221   122222211 125899


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|.++|
T Consensus       191 vid~~G  196 (280)
T TIGR03366       191 ALEFSG  196 (280)
T ss_pred             EEECCC
Confidence            999877

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.79  E-value=0.2  Score=41.85  Aligned_cols=44  Identities=20%  Similarity=0.151  Sum_probs=37.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA   45 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~   45 (254)
                      |+.-+++.|.|+ |.+|..++..|++.|++|++.+++++.++...
T Consensus         1 ~~~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~   44 (292)
T PRK07530          1 MMAIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGL   44 (292)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            566678889987 89999999999999999999999988766543

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.79  E-value=0.089  Score=39.66  Aligned_cols=34  Identities=18%  Similarity=0.278  Sum_probs=30.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL   36 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r   36 (254)
                      ++||.++|.|| |.+|...++.|.+.|++|++++.
T Consensus        11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            57999999998 88999999999999999998854

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.78  E-value=0.027  Score=46.53  Aligned_cols=44  Identities=23%  Similarity=0.422  Sum_probs=37.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA   45 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~   45 (254)
                      ++||+++|.|.|.-+|+-++..|.++|++|+++.+...++++..
T Consensus       156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~  199 (285)
T PRK14189        156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHT  199 (285)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHh
Confidence            57999999999999999999999999999999877655554443

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.77  E-value=0.11  Score=43.56  Aligned_cols=144  Identities=17%  Similarity=0.135  Sum_probs=78.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCc------eEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDV------KFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~------~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++.|+|+ |++|.+++..|+.++.  ++++++.+++..+-..-++..-.      ..+..| .|.           +.+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y-----------~~~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDY-----------EDL   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CCh-----------hhh
Confidence            36899999 9999999999987764  79999998655444333331111      111222 111           112


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc---
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY---  153 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~---  153 (254)
                      ..-|+++..||....+.         ++-   .+.+..|..    +.+...+.+.+..+     ++.++.+|--.-.   
T Consensus        68 ~~aDiVvitAG~prKpG---------mtR---~DLl~~Na~----I~~~i~~~i~~~~~-----d~ivlVvtNPvD~~ty  126 (313)
T COG0039          68 KGADIVVITAGVPRKPG---------MTR---LDLLEKNAK----IVKDIAKAIAKYAP-----DAIVLVVTNPVDILTY  126 (313)
T ss_pred             cCCCEEEEeCCCCCCCC---------CCH---HHHHHhhHH----HHHHHHHHHHhhCC-----CeEEEEecCcHHHHHH
Confidence            37899999999754332         222   344555543    34444444444431     4666666653322   


Q ss_pred             -----cCCCCCc-cchhchHHHHHhHHHHHHHhcc
Q psy12833        154 -----EGQSGQV-AYSASKSGIVGMTLPMARDLAG  182 (254)
Q Consensus       154 -----~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~  182 (254)
                           .++|... --+.+..-...|-.-+|+++.-
T Consensus       127 ~~~k~sg~p~~rvig~gt~LDsaR~~~~lae~~~v  161 (313)
T COG0039         127 IAMKFSGFPKNRVIGSGTVLDSARFRTFLAEKLGV  161 (313)
T ss_pred             HHHHhcCCCccceecccchHHHHHHHHHHHHHhCC
Confidence                 2233222 2233333344466667777643

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.76  E-value=0.16  Score=40.33  Aligned_cols=58  Identities=16%  Similarity=0.101  Sum_probs=43.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----------------CCCceEEecCCCCHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----------------GPDVKFAPVDVTSEE   63 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dls~~~   63 (254)
                      .+.+||+.|++.|  + =+..|+++|++|+.++.++..++...++.                +.++.++.+|+.+.+
T Consensus        34 ~~~rvLd~GCG~G--~-da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  107 (213)
T TIGR03840        34 AGARVFVPLCGKS--L-DLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALT  107 (213)
T ss_pred             CCCeEEEeCCCch--h-HHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCC
Confidence            4579999998665  3 45567899999999999998888754432                235777888887754

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.76  E-value=0.03  Score=47.70  Aligned_cols=39  Identities=15%  Similarity=0.214  Sum_probs=30.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC---EEEEeeCCCchhHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG---RVVLCDLPTSEGES   43 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~---~v~~~~r~~~~~~~   43 (254)
                      .+++|.||||.+|+.+++.|.++++   ++....++++..+.
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~   43 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE   43 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe
Confidence            4799999999999999999999776   44666665544433

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=95.74  E-value=0.044  Score=46.50  Aligned_cols=75  Identities=20%  Similarity=0.283  Sum_probs=48.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      +++++||.|++ ++|.++++.+...| .+|+.+.++.++.+.+ ++++.. +.+  |..+.     +.+++.+..  .++
T Consensus       167 ~~~~vlI~g~~-~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~-----~~~~i~~~~~~~~~  236 (340)
T cd05284         167 PGSTVVVIGVG-GLGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGAD-HVL--NASDD-----VVEEVRELTGGRGA  236 (340)
T ss_pred             CCCEEEEEcCc-HHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCc-EEE--cCCcc-----HHHHHHHHhCCCCC
Confidence            57899999954 59999998888888 8999988887766655 555431 122  22221     222232222  259


Q ss_pred             cEEEeCCc
Q psy12833         80 DVNVNCAG   87 (254)
Q Consensus        80 d~li~~ag   87 (254)
                      |+++.+.|
T Consensus       237 dvvld~~g  244 (340)
T cd05284         237 DAVIDFVG  244 (340)
T ss_pred             CEEEEcCC
Confidence            99998876

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=95.73  E-value=0.18  Score=41.42  Aligned_cols=81  Identities=17%  Similarity=0.156  Sum_probs=56.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEe--eCCCc--hhHHH----------------HHHh-CCCceEEecCCCCHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLC--DLPTS--EGESV----------------AKEL-GPDVKFAPVDVTSEED   64 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~--~r~~~--~~~~~----------------~~~~-~~~~~~~~~Dls~~~~   64 (254)
                      +|+|.|++|.+|+++++...+.+.+++..  ++...  +..++                .+++ .....-+..|+|.|+.
T Consensus         2 ~V~V~Ga~GkMG~~v~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~~v~v~~~~~~~~~l~~~~~~~~d~VvIDFT~P~~   81 (275)
T TIGR02130         2 QIMVNGCPGKMGKAVAEAADAAGLEIVPTSFGGEEEAENEAEVAGKEILLHGPSEREARIGEVFAKYPELICIDYTHPSA   81 (275)
T ss_pred             eEEEeCCCChHHHHHHHHHhcCCCEEEeeEccccccccchhhhcccceeeeccccccccHHHHHhhcCCEEEEECCChHH
Confidence            58999999999999999988888888763  22111  11111                0111 1113337789999999


Q ss_pred             HHHHHHHHHHHcCCCcEEEeCCcc
Q psy12833         65 VQKAVLLCKDSFGKLDVNVNCAGI   88 (254)
Q Consensus        65 ~~~~~~~~~~~~~~id~li~~ag~   88 (254)
                      +.+.++.+.+.  ++.+|+-..|.
T Consensus        82 ~~~n~~~~~~~--gv~~ViGTTG~  103 (275)
T TIGR02130        82 VNDNAAFYGKH--GIPFVMGTTGG  103 (275)
T ss_pred             HHHHHHHHHHC--CCCEEEcCCCC
Confidence            99999988886  78888877773

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	254
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		1e-84
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		2e-83
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		2e-83
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-83
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		6e-83
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-82
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-59
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		2e-57
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		4e-55
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		2e-47
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-26
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-25
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-25
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-25
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-25
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-24
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-24
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		1e-23
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-22
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		9e-22
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		5e-21
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		7e-21
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		1e-20
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-20
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-20
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-20
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-20
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		5e-20
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		6e-20
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		8e-20
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-19
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-18
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-18
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-18
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		3e-18
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-18
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		3e-18
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		9e-18
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		1e-17
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-17
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-17
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		4e-17
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		4e-17
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		5e-17
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		5e-17
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		8e-17
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		9e-17
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-16
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		1e-16
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-16
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		4e-16
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-16
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-16
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		6e-16
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-16
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-15
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-15
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		2e-15
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-15
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-15
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-15
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		3e-15
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-15
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		3e-15
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		4e-15
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		4e-15
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		5e-15
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		5e-15
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		5e-15
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		5e-15
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		6e-15
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		7e-15
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		7e-15
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		7e-15
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		8e-15
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		1e-14
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-14
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-14
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		3e-14
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-14
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		3e-14
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		5e-14
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		6e-14
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-13
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-13
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		2e-13
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-13
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		4e-13
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		4e-13
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-13
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		5e-13
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		5e-13
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-13
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		5e-13
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-13
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		5e-13
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		6e-13
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		7e-13
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		7e-13
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-12
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-12
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-12
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		1e-12
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-12
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-12
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-12
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-12
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-12
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-12
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-12
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		3e-12
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		3e-12
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		3e-12
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		3e-12
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-12
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		5e-12
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		6e-12
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		7e-12
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		8e-12
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		1e-11
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-11
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-11
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		2e-11
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-11
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		3e-11
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		3e-11
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		4e-11
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		4e-11
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-11
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		5e-11
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-11
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		7e-11
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		9e-11
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		1e-10
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-10
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-10
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		2e-10
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		2e-10
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		2e-10
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-10
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		3e-10
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-10
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		3e-10
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		3e-10
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-10
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		4e-10
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		6e-10
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-09
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		1e-09
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		1e-09
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		2e-09
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-09
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		2e-09
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		3e-09
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		4e-09
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		5e-09
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		5e-09
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		8e-09
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		9e-09
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		1e-08
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-08
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		2e-08
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		2e-08
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-08
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		2e-08
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		4e-08
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-08
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		4e-08
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		6e-08
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		6e-08
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		7e-08
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		9e-08
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		1e-07
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		2e-07
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		2e-07
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		4e-07
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-07
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		6e-07
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		7e-07
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-07
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		9e-07
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		9e-07
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-06
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-06
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-06
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-06
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-06
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-06
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-06
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-06
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		2e-06
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		2e-06
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-06
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-06
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		4e-06
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		4e-06
3rj5_A	254	Structure Of Alcohol Dehydrogenase From Drosophila		8e-06
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		1e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-05
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		2e-05
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-05
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-05
1a4u_A	254	Alcohol Dehydrogenase From Drosophila Lebanonensis		2e-05
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		2e-05
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		3e-05
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-05
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		4e-05
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		5e-05
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		5e-05
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		5e-05
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		8e-05
1mg5_A	255	Crystal Structure Of Drosophila Melanogaster Alcoho		1e-04
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-04
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		3e-04
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		4e-04
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		6e-04
3l6e_A	235	Crystal Structure Of Putative Short Chain Dehydroge		7e-04

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score =  308 bits (790), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 156/252 (61%), Positives = 189/252 (75%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG AT            L DLP S GE+ AK+LG +  FAP DVTS
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 67
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+DVQ A+ L K  FG++DV VNCAGI+ A K +N  KG  H+L+DF+R+L VN +GTFN
Sbjct: 68  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 127
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L EKVRNFLA  +P P RLG P E+A LVQ+II NP +N
Sbjct: 188 PIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 247
Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score =  305 bits (780), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/252 (61%), Positives = 188/252 (74%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG AT            L DLP S GE+ AK+LG +  FAP DVTS
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 69
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+DVQ A+ L K  FG++DV VNCAGI+ A K +N  KG  H+L+DF+R+L VN +GTFN
Sbjct: 70  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 129
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 130 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 189
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L EKV NFLA  +P P RLG P E+A LVQ+II NP +N
Sbjct: 190 PIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 249
Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 250 GEVIRLDGAIRM 261

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score =  304 bits (779), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/252 (61%), Positives = 188/252 (74%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG AT            L DLP S GE+ AK+LG +  FAP DVTS
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 67
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+DVQ A+ L K  FG++DV VNCAGI+ A K +N  KG  H+L+DF+R+L VN +GTFN
Sbjct: 68  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 127
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L EKV NFLA  +P P RLG P E+A LVQ+II NP +N
Sbjct: 188 PIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 247
Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score =  303 bits (777), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 149/252 (59%), Positives = 191/252 (75%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG +T            L D+P SEGE+ AK+LG +  FAP +VTS
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTS 67
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E++VQ A+ L K+ FG++DV VNCAGI+ A K ++  K  VH+L+DF+R++ VN +GTFN
Sbjct: 68  EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFN 127
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A ++ +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L +KVRNFLA  +P P RLG P E+A LVQ +I NP +N
Sbjct: 188 PIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQMVIENPFLN 247
Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score =  303 bits (776), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 149/252 (59%), Positives = 191/252 (75%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG +T            L D+P SEGE+ AK+LG +  FAP +VTS
Sbjct: 7   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTS 66
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E++VQ A+ L K+ FG++DV VNCAGI+ A K ++  K  VH+L+DF+R++ VN +GTFN
Sbjct: 67  EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFN 126
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A ++ +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 127 VIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 186
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L +KVRNFLA  +P P RLG P E+A LVQ +I NP +N
Sbjct: 187 PIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQMVIENPFLN 246
Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 247 GEVIRLDGAIRM 258

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score =  301 bits (771), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 148/252 (58%), Positives = 190/252 (75%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG +T            L D+P SEGE+ AK+LG +  FAP +VTS
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTS 67
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E++VQ A+ L K+ FG++DV VNCAGI+ A K ++  K  VH+L+DF+R++ VN +GTFN
Sbjct: 68  EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFN 127
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A ++ +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L + VRNFLA  +P P RLG P E+A LVQ +I NP +N
Sbjct: 188 PIGIRVVTIAPGLFATPLLTTLPDTVRNFLASQVPFPSRLGDPAEYAHLVQMVIENPFLN 247
Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score =  224 bits (571), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 127/255 (49%), Positives = 167/255 (65%), Gaps = 10/255 (3%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           ++  V +VTGGASGLG AT            + D+    GE V  +LG   +FA  DVT 
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADVTD 63
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E  V  A+ L  ++ G L + VNCAG   A ++ + +   V SL  F++I+ +N VG+FN
Sbjct: 64  EAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDG--VFSLAAFRKIVDINLVGSFN 120
Query: 122 VARLSAQLIHENKL---NEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
           V RL+A+ I + +    N +  RGVIINTAS+AA++GQ GQ AYSASK G+VGMTLP+AR
Sbjct: 121 VLRLAAERIAKTEPVGPNAEE-RGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
           DLA   IRV TIAPGLFDTPLL+ L E+ R  L + +P P RLG+PDE+  L   II NP
Sbjct: 180 DLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENP 239
Query: 239 LINGEVIRIDGALRM 253
           ++NGEVIR+DGA+RM
Sbjct: 240 MLNGEVIRLDGAIRM 254

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/246 (51%), Positives = 161/246 (65%), Gaps = 12/246 (4%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTGGASGLG+A             + DL   EGE        D+ +   DVT EEDV++
Sbjct: 6   LVTGGASGLGRAAALALKARGYRVVVLDL-RREGE--------DLIYVEGDVTREEDVRR 56
Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
           AV   ++    L   V+ AG+  A KI    K   H L+ F+R+L VN +GTFNV RL+A
Sbjct: 57  AVARAQEE-APLFAVVSAAGVGLAEKILG--KEGPHGLESFRRVLEVNLLGTFNVLRLAA 113
Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
             + EN  + +G RGVI+NTAS+AA+EGQ GQ AY+ASK G+V +TLP AR+LAG GIRV
Sbjct: 114 WAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRV 173
Query: 188 NTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRI 247
            T+APGLFDTPLL  L EK +  LA  +P P RLG P+E+A LV  I+ NP++NGEV+R+
Sbjct: 174 VTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRL 233
Query: 248 DGALRM 253
           DGALRM
Sbjct: 234 DGALRM 239

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score =  211 bits (536), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/252 (48%), Positives = 156/252 (61%), Gaps = 2/252 (0%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVT 60
            LK  V +VTG +SGLG A               DL    GE  A ELG  V+F   DVT
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVT 63
Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           +E D   A+   K  FG +   VNCAG +   KI    +   H+LD F R + VN +GTF
Sbjct: 64  NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILG--RSGPHALDSFARTVAVNLIGTF 121
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           N  RL+A++  + + + DG RGVI+NTASIAA++GQ GQ AY+ASK G+  +TLP AR+L
Sbjct: 122 NXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAREL 181
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           A  GIRV TIAPG+FDTP  +   + V++ LA S+P P RLG  +E+A LV+ I  N  +
Sbjct: 182 ARFGIRVVTIAPGIFDTPXXAGXPQDVQDALAASVPFPPRLGRAEEYAALVKHICENTXL 241
Query: 241 NGEVIRIDGALR 252
           NGEVIR+DGALR
Sbjct: 242 NGEVIRLDGALR 253

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/253 (41%), Positives = 150/253 (59%), Gaps = 3/253 (1%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +G   +V+GGA GLG+AT            + DL   +G+++A ELG   +F   +VTS
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS 87
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNC-AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           E+ V  A+    +  G+L   V    G   A +I   + G+   +  F + + +   GT+
Sbjct: 88  EDSVLAAIE-AANQLGRLRYAVVAHGGFGVAQRIVQRD-GSPADMGGFTKTIDLYLNGTY 145
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           NVARL A  I   +  E+G RG ++ TASIA YEGQ GQ AY+A+K+G++G+T+  ARDL
Sbjct: 146 NVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDL 205
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           + AGIRVNTIAPG   TP++  + E+     A +IP P+RLG PDEFA     ++TN  I
Sbjct: 206 SSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNGYI 265
Query: 241 NGEVIRIDGALRM 253
           NGEV+R+DGA R 
Sbjct: 266 NGEVMRLDGAQRF 278

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 130/258 (50%), Gaps = 19/258 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           LKG   +VTG + GLGKA             L   P S   ++ A+E    G +V  A  
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV + EDV+  V    D+FG++D+ VN AGI+    +         S  D+  +L  N  
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLK------MSEKDWDDVLNTNLK 116
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             +   +  ++++ + K       G IIN  SIA   G +GQ  Y+ASK+G++G T  +A
Sbjct: 117 SAYLCTKAVSKIMLKQK------SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIA 170
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           ++ A  GI  N +APG+  T +  +L +KV+     +IP  +R G P+E A +V  + ++
Sbjct: 171 KEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPL-KRFGTPEEVANVVGFLASD 229
Query: 238 P--LINGEVIRIDGALRM 253
               I G+VI IDG L M
Sbjct: 230 DSNYITGQVINIDGGLVM 247

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 17/256 (6%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTG + G+GKA                   S  ++++  LG + K   ++VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E ++  +    D FG +D+ VN AGI+    +    +      +++  I+  N    F 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +      +G IIN  S+    G +GQ  Y+A+K+G++G T  MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
             G+ VNT+APG  +T +   LN++ R      +PA  RLG P E A  V + + +P   
Sbjct: 178 SRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
            I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 17/256 (6%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTG + G+GKA                   S  ++++  LG + K   ++VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E ++  +    D FG +D+ VN AGI+    +    +      +++  I+  N    F 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +      +G IIN  S+    G +GQ  Y+A+K+G++G T  MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
             G+ VNT+APG  +T +   LN++ R      +PA  RLG P E A  V + + +P   
Sbjct: 178 SRGVTVNTVAPGAIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
            I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 17/256 (6%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTG + G+GKA                   S  ++++  LG + K   ++VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E ++  +    D FG +D+ VN AGI+    +    +      +++  I+  N    F 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +      +G IIN  S+    G +GQ  ++A+K+G++G T  MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
             G+ VNT+APG  +T +   LN++ R      +PA  RLG P E A  V + + +P   
Sbjct: 178 SRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
            I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 17/256 (6%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTG + G+GKA                   S  ++++  LG + K   ++VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E ++  +    D FG +D+ VN A I+    +    +      +++  I+  N    F 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +      +G IIN  S+    G +GQ  Y+A+K+G++G T  MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
             G+ VNT+APG  +T +   LN++ R      +PA  RLG P E A  V + + +P   
Sbjct: 178 SRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
            I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 17/256 (6%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTG + G+GKA                   S  ++++  LG + K   ++VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E ++  +    D FG +D+ VN A I+    +    +      +++  I+  N    F 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +      +G IIN  S+    G +GQ  Y+A+K+G++G T  MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
             G+ VNT+APG  +T +   LN++ R      +PA  RLG P E A  V + + +P   
Sbjct: 178 SRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
            I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 130/256 (50%), Gaps = 19/256 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L+G V LVTG   G+G+A             +        ++VA+E+    G       +
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           ++ SEE + KA     +    +D+ VN AGI+   K+F        SL D++ +L VN  
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGITRD-KLF-----LRMSLLDWEEVLKVNLT 118
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           GTF V + S + + + +       G I+N +S+  + G  GQV YS +K+G++G T  +A
Sbjct: 119 GTFLVTQNSLRKMIKQRW------GRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLA 172
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           ++LA   + VN +APG  +T + ++L+E+++      IP   R G P+E A +V  + + 
Sbjct: 173 KELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLG-RFGSPEEVANVVLFLCSE 231
Query: 238 --PLINGEVIRIDGAL 251
               I GEVI ++G +
Sbjct: 232 LASYITGEVIHVNGGM 247

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 27/266 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG-PDVKFAP---- 56
           L+  + LVTG  SG+G+A              CDL  +  +   + LG P  K  P    
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64
Query: 57  -----VDVTSEEDVQKAVLLCKDSFGKL-DVNVNCAGISCAFKIFNYNKGTVH-SLDDFK 109
                 DV+     +  +   +  F +   V V+CAGI+        ++  +H S DD+ 
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT-------QDEFLLHMSEDDWD 117
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
           +++ VN  GTF V + +AQ +  N     G RG IIN +SI    G  GQ  Y+ASK+G+
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSN-----GCRGSIINISSIVGKVGNVGQTNYAASKAGV 172
Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQ 229
           +G+T   AR+L   GIR N++ PG   TP+   + +KV + +   IP    LG P++ A 
Sbjct: 173 IGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGH-LGDPEDVAD 231
Query: 230 LVQSIITNP--LINGEVIRIDGALRM 253
           +V  + +     I G  + + G L M
Sbjct: 232 VVAFLASEDSGYITGTSVEVTGGLFM 257

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 17/256 (6%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTG + G+GKA                   S  ++++  LG + K   ++VT+
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTN 66
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E ++  +    D FG +D+ VN AGI+    +    +      +++  I   N    F 
Sbjct: 67  PESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKE------EEWSDIXETNLTSIF- 119
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             RLS  ++          +G IIN  S+    G +GQ  Y+A+K+G++G T   AR++A
Sbjct: 120 --RLSKAVLRGXXKKR---QGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVA 174
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
             G+ VNT+APG  +T     LN++ R      +PA  RLG P E A  V + + +P   
Sbjct: 175 SRGVTVNTVAPGFIETDXTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 232
Query: 239 LINGEVIRIDGALRMI 254
            I GE + ++G    I
Sbjct: 233 YITGETLHVNGGXYXI 248

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 19/259 (7%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC----DLPTSEGESVAKELGPDVKFAP 56
           MLKG V LVTG + G+G+A             +     +   +E     K+LG D     
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DV + EDV   V    D FG++D+ VN AG++    +    +      +++  ++  N 
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKE------EEWDTVINTNL 114
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G F   +  ++ +   +       G I+N AS+    G  GQ  Y A+K+G++G+T   
Sbjct: 115 KGVFLCTKAVSRFMMRQR------HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTS 168
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           A++LA   I VN IAPG   T +  +L+E ++  + + IPA Q  G   + A  V    +
Sbjct: 169 AKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQ-FGEAQDIANAVTFFAS 227
Query: 237 N--PLINGEVIRIDGALRM 253
           +    I G+ + +DG + M
Sbjct: 228 DQSKYITGQTLNVDGGMVM 246

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 17/253 (6%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   ++TGGA GLG               L D+   EG + A+ELG   ++  +DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           EED Q+ V   ++ FG +D  VN AGIS    +         S++ F++++ +N  G F 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL------ETESVERFRKVVEINLTGVFI 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     +      +D   G I+N +S A   G +   +Y ASK G+ G++   A +L 
Sbjct: 117 GMKTVIPAM------KDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ-RLGHPDEFAQLVQSII--TNP 238
              IRVN++ PG+  TP+ +     +R         P  R+G P E A  V  ++  T+ 
Sbjct: 171 TDRIRVNSVHPGMTYTPMTA--ETGIRQGEGNYPNTPMGRVGEPGEIAGAVVKLLSDTSS 228
Query: 239 LINGEVIRIDGAL 251
            + G  + +DG  
Sbjct: 229 YVTGAELAVDGGW 241

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 19/199 (9%)
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV+ E +V+       + +G+LDV VN AGI+    +    +      DD++ +L +N  
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKR------DDWQSVLDLNLG 139
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F  +R +A+++ + +       G IIN AS+    G  GQ  YSA+K+G++G+T  +A
Sbjct: 140 GVFLCSRAAAKIMLKQR------SGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVA 193
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           ++LA  GI VN +APG   T    M +E     L   IP   R G   E A +V+ +  +
Sbjct: 194 KELASRGITVNAVAPGFIAT---DMTSELAAEKLLEVIPL-GRYGEAAEVAGVVRFLAAD 249
Query: 238 P---LINGEVIRIDGALRM 253
           P    I G+VI IDG L M
Sbjct: 250 PAAAYITGQVINIDGGLVM 268

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 121/252 (48%), Gaps = 22/252 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPV--DV 59
           LK    L+TG A G+G+AT             CD+     E   +E    V   PV  DV
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE----EGPLREAAEAVGAHPVVXDV 58
Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
                V++         G+LD  V+ AGI+     F++       L+D++ +L VN  G+
Sbjct: 59  ADPASVERGFAEALAHLGRLDGVVHYAGITR--DNFHWKX----PLEDWELVLRVNLTGS 112
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F VA+ +++   E         G I+ TAS   Y G  GQ  Y+AS +G+VG+T  +A +
Sbjct: 113 FLVAKAASEAXREKN------PGSIVLTAS-RVYLGNLGQANYAASXAGVVGLTRTLALE 165
Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
           L   GIRVNT+APG  +T   + + EKVR     + P   R G P E A     ++++  
Sbjct: 166 LGRWGIRVNTLAPGFIETRXTAKVPEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDES 224
Query: 238 PLINGEVIRIDG 249
             I G+V+ +DG
Sbjct: 225 SFITGQVLFVDG 236

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           VDVT  + V +A    ++  G ++V V+ AG+S    +    +      + F++++  N 
Sbjct: 80  VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTE------EKFEKVINANL 133
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G F VA+ +++ +  NK       G +I  AS++   G   Q  Y+ASK+G++GM   +
Sbjct: 134 TGAFRVAQRASRSMQRNKF------GRMIFIASVSGLWGIGNQANYAASKAGVIGMARSI 187
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           AR+L+ A +  N +APG  DT +   L+E+++    + IPA +R+G P E A +V  + +
Sbjct: 188 ARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLAS 246
Query: 237 N--PLINGEVIRIDGALRM 253
                I+G VI +DG + M
Sbjct: 247 EDASYISGAVIPVDGGMGM 265

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L+G V LVTGG+ GLG               +      E    A++L    G +      
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV++ E+V+K +   K+ FGKLD  VN AGI+        +      LD+F++++ VN  
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN------RRHPAEEFPLDEFRQVIEVNLF 132
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMTLPM 176
           GT+ V R +  L+ E+          IIN  S+   E     + AY+ASK G+  +T  +
Sbjct: 133 GTYYVCREAFSLLRESD------NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKAL 186
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
           A++    GIRVN IAPG + T +   +    EK+ +++ + IP   R G P++   +   
Sbjct: 187 AKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKL-DYMLKRIPL-GRTGVPEDLKGVAVF 244
Query: 234 IITN--PLINGEVIRIDGAL 251
           + +     + G++I +DG  
Sbjct: 245 LASEEAKYVTGQIIFVDGGW 264

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG   GLG+A             L      + + +A ELG  +   P +++ 
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSD 67
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E V+      ++  G +D+ VN AGI+              S +D+  +L VN    FN
Sbjct: 68  REAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRM------SDEDWDAVLTVNLTSVFN 121
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + R   +L H      +G    IIN  SI    G  GQ  Y ASK+G++G +  +A+++A
Sbjct: 122 LTR---ELTHPMMRRRNGR---IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIA 175
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
              + VN IAPG  ++ +   LNEK ++ +  +IP  +R+G   + A  V  + ++    
Sbjct: 176 SRNVTVNCIAPGFIESAMTGKLNEKQKDAIMGNIPM-KRMGVGADIAAAVVYLASDEAAY 234
Query: 240 INGEVIRIDGALRMI 254
           + G+ + ++G + MI
Sbjct: 235 VTGQTLHVNGGMAMI 249

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG   GLG+A             L      + + +A ELG  +   P +++ 
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSD 64
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E V+      ++  G +D+ VN AGI+              S +D+  +L VN    FN
Sbjct: 65  REAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRM------SDEDWDAVLTVNLTSVFN 118
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + R   +L H      +G    IIN  SI    G  GQ  Y ASK+G++G +  +A+++A
Sbjct: 119 LTR---ELTHPMMRRRNGR---IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIA 172
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
              + VN IAPG  ++ +   LNEK ++ +  +IP  +R+G   + A  V  + ++    
Sbjct: 173 SRNVTVNCIAPGFIESAMTGKLNEKQKDAIMGNIPM-KRMGVGADIAAAVVYLASDEAAY 231
Query: 240 INGEVIRIDGALRMI 254
           + G+ + ++G + MI
Sbjct: 232 VTGQTLHVNGGMAMI 246

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 125/257 (48%), Gaps = 26/257 (10%)
Query: 3   KGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
           KGV  LVTGGA G+G+A             LCDL   EG+ VA+ +G    F  VD+  E
Sbjct: 7   KGV--LVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVAEAIGG--AFFQVDLEDE 61
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
            +  + V     + G++DV VN A I+               L +++R+L VN     ++
Sbjct: 62  RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVR------LPEWRRVLEVNLTAPMHL 115
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           + L+A+     ++ + G  G I+N AS+     +    AY+ASK G+V +T  +A DLA 
Sbjct: 116 SALAAR-----EMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAP 169
Query: 183 AGIRVNTIAPGLFDTP------LLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
             IRVN +APG   T        LS   E+ R      + A +RLG P+E A+ V  + +
Sbjct: 170 LRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDW-EDLHALRRLGKPEEVAEAVLFLAS 228
Query: 237 N--PLINGEVIRIDGAL 251
                I G ++ +DG +
Sbjct: 229 EKASFITGAILPVDGGM 245

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 106/199 (53%), Gaps = 15/199 (7%)
Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           VDVT  + V +A    ++  G ++V V+ AG+S    +    +      + F++++  N 
Sbjct: 60  VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTE------EKFEKVINANL 113
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G F VA+ +++ +  NK       G +I   S++   G   Q  Y+ASK+G++GM   +
Sbjct: 114 TGAFRVAQRASRSMQRNKF------GRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           AR+L+ A +  N +APG  DT +   L+E+++    + IPA +R+G P E A +V  + +
Sbjct: 168 ARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLAS 226
Query: 237 N--PLINGEVIRIDGALRM 253
                I+G VI +DG + M
Sbjct: 227 EDASYISGAVIPVDGGMGM 245

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   ++TGGA GLG               L D+   EG + A+ELG   ++  +DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           EED Q+ V   ++ FG +D  VN AGIS    +         S++ F++++ +N  G F 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL------ETESVERFRKVVEINLTGVFI 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     +      +D   G I+N +S A   G +   +Y ASK G+ G++   A +L 
Sbjct: 117 GMKTVIPAM------KDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII--TNPL 239
              IRVN++ PG+  TP+ +    +       + P  +    P E A  V  ++  T+  
Sbjct: 171 TDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSY 230
Query: 240 INGEVIRIDGAL 251
           + G  + +DG  
Sbjct: 231 VTGAELAVDGGW 242

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DVT  + V +A    ++  G ++V V+ AG+S    +    +      + F++++  N  
Sbjct: 61  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTE------EKFEKVINANLT 114
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F VA+ +++ +  NK       G +I   S++   G   Q  Y+ASK+G++GM   +A
Sbjct: 115 GAFRVAQRASRSMQRNKF------GRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIA 168
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           R+L+ A +  N +APG  DT +   L+E+++    + IPA +R+G P E A +V  + + 
Sbjct: 169 RELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLASE 227
Query: 238 --PLINGEVIRIDGALRM 253
               I+G VI +DG + M
Sbjct: 228 DASYISGAVIPVDGGMGM 245

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL---PTSEGESVAKELGPDVKFAPVD 58
             G V LVTG    +G AT            L D+      + E+  +E G + +    D
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFK-IFNYNKGTVHSLDDFKRILLVNTV 117
           VTSEE V   V      FGK+D   N AG   AF  + +Y        DDF R+L +N  
Sbjct: 65  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPS------DDFARVLTINVT 118
Query: 118 GTFNVAR-LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           G F+V + +S Q+I +N        G I+NTAS+A  +G     AY  SK  I+ +T   
Sbjct: 119 GAFHVLKAVSRQMITQN-------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETA 171
Query: 177 ARDLAGAGIRVNTIAPG 193
           A DLA   IRVN I+PG
Sbjct: 172 ALDLAPYNIRVNAISPG 188

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 18/251 (7%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG   G+G+                       +SV  E+   G +      DV+ +
Sbjct: 46  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 105
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           E++ + +         +D+ VN AGI+    +F   K      D+++ +L  N    F +
Sbjct: 106 EEISEVINKILTEHKNVDILVNNAGIT-RDNLFLRMKN-----DEWEDVLRTNLNSLFYI 159
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            +  ++ +  N+       G IIN +SI    G  GQ  YS+SK+G++G T  +A++LA 
Sbjct: 160 TQPISKRMINNRY------GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 213
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--LI 240
             I VN IAPG   + +   ++E+++  +  +IPA  R+G P+E A L   + ++    I
Sbjct: 214 RNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAG-RMGTPEEVANLACFLSSDKSGYI 272
Query: 241 NGEVIRIDGAL 251
           NG V  IDG L
Sbjct: 273 NGRVFVIDGGL 283

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 111/253 (43%), Gaps = 23/253 (9%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           V +VTGG SG+G+AT            + D+       VA E+G       VDV+S +D 
Sbjct: 29  VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDA 88
Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
           +  V      +G++DV VN AG      +    + T      + RI  VN  G F  ++ 
Sbjct: 89  ESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEET------WDRIXSVNVKGIFLCSKY 142
Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
              +   N        G IINT S  A    + + AY ASK  I  +T   A D A  GI
Sbjct: 143 VIPVXRRNG------GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGI 196
Query: 186 RVNTIAPGLFDTPLLSMLNEKVR-------NFLARSIPAPQRLGHPDEFAQ--LVQSIIT 236
           RVN +APG  D+P  + +  + +       +F AR++    R G  +E A+  L  +   
Sbjct: 197 RVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV--XDRXGTAEEIAEAXLFLASDR 254
Query: 237 NPLINGEVIRIDG 249
           +    G ++ +DG
Sbjct: 255 SRFATGSILTVDG 267

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 31/259 (11%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK----ELGPDVKF--APVDVTS 61
           L+TGG SGLG+AT            L D+ +SEG   +K    E  PD +      DV+ 
Sbjct: 17  LITGGGSGLGRATAVRLAAEGAKLSLVDV-SSEGLEASKAAVLETAPDAEVLTTVADVSD 75
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E  V+  V    + FG++D   N AGI         N     +  +F +++ +N  G F 
Sbjct: 76  EAQVEAYVTATTERFGRIDGFFNNAGIEG-----KQNPTESFTAAEFDKVVSINLRGVFL 130
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
                 +++ E         G+++NTAS+    G   Q  Y+A+K G+VG+T   A +  
Sbjct: 131 GLEKVLKIMREQG------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG 184
Query: 182 GAGIRVNTIAPGLFDTPLL--SMLN-------EKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
             GIR+N IAPG   TP++  SM         +    F+   +   +R G   E A +V 
Sbjct: 185 RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFI--QVNPSKRYGEAPEIAAVVA 242
Query: 233 SIITN--PLINGEVIRIDG 249
            ++++    +N  V+ IDG
Sbjct: 243 FLLSDDASYVNATVVPIDG 261

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +G + LVTG + G+G+A                   +  ++++  LG + K   ++VT 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
              ++  +   +  FG++D+ VN AGI+    +           +++  I+  N    F 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKD------EEWNDIIETNLSSVFR 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +       G II   S+    G  GQ  Y+A+K+G++G +  +AR++A
Sbjct: 117 LSKAVMRAMMKKR------HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVA 170
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
             GI VN +APG  +T +   L++  R  +   +PA  RLG   E A  V  + ++    
Sbjct: 171 SRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAG-RLGGAQEIANAVAFLASDEAAY 229
Query: 240 INGEVIRIDGALRMI 254
           I GE + ++G + M+
Sbjct: 230 ITGETLHVNGGMYMV 244

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 113/235 (48%), Gaps = 28/235 (11%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V LV+GGA G+G +               D+   EG+++A EL    ++  +DVT 
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ 64
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVNTVGT 119
               + AV     +FG L V VN AGI         N GT+  ++L +++RIL VN  G 
Sbjct: 65  PAQWKAAVDTAVTAFGGLHVLVNNAGI--------LNIGTIEDYALTEWQRILDVNLTGV 116
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA---YSASKSGIVGMTLPM 176
           F   R   + + E        RG IIN +SI   EG +G VA   Y+A+K  + G+T   
Sbjct: 117 FLGIRAVVKPMKEAG------RGSIINISSI---EGLAGTVACHGYTATKFAVRGLTKST 167
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           A +L  +GIRVN+I PGL  TP+   + E +         A  R   P E + LV
Sbjct: 168 ALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQ------TALGRAAEPVEVSNLV 216

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +G + LVTG + G+G+A                   +  ++++  LG + K   ++VT 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
              ++  +   +  FG++D+ VN AGI+    +           +++  I+  N    F 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKD------EEWNDIIETNLSSVFR 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +       G II   S+    G  GQ  ++A+K+G++G +  +AR++A
Sbjct: 117 LSKAVMRAMMKKR------HGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVA 170
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
             GI VN +APG  +T +   L++  R  +   +PA  RLG   E A  V  + ++    
Sbjct: 171 SRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAG-RLGGAQEIANAVAFLASDEAAY 229
Query: 240 INGEVIRIDGALRMI 254
           I GE + ++G + M+
Sbjct: 230 ITGETLHVNGGMYMV 244

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 22/259 (8%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKE----LGPDVKFAPVDVTS 61
           V +VTG +SG G A               DL     E  A+         V     DV  
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD 63
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHS--LDDFKRILLVNTVGT 119
           E DV  A+    + FG +DV VN AGI+      N   G +H+  ++ F +++ VN  G 
Sbjct: 64  EGDVNAAIAATMEQFGAIDVLVNNAGITG-----NSEAGVLHTTPVEQFDKVMAVNVRGI 118
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F    L  + +  + L +    GVI+N AS+A+     G+ AY+ SK  ++ +T  +A D
Sbjct: 119 F----LGCRAVLPHMLLQGA--GVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVD 172
Query: 180 LAGAGIRVNTIAPGLFDTPL--LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
            AG+GIR N + PG+ +TP+    +   ++R+ +   IP  + +G   + A  V  +   
Sbjct: 173 YAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP-QKEIGTAAQVADAVMFLAGE 231
Query: 238 --PLINGEVIRIDGALRMI 254
               +NG  + +DGA   I
Sbjct: 232 DATYVNGAALVMDGAYTAI 250

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 22/252 (8%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG-ESVAKEL----GPDVKFAPVDVTSE 62
           +VTG + G+GKA             +    +++  E V+K++    G  + F   DV+ E
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGG-DVSKE 63
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
            DV+  +    D++G +DV VN AGI+    +    K        +  ++ +N  G F  
Sbjct: 64  ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKK------SQWDEVIDLNLTGVFLC 117
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            + + +++ + +      +G IIN AS+    G  GQ  Y+A+K+G++G +   AR+ A 
Sbjct: 118 TQAATKIMMKKR------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGAS 171
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP---L 239
             I VN + PG   + + + L E +   +  +IP   R G P+  A LV+ +  +P    
Sbjct: 172 RNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLG-RTGQPENVAGLVEFLALSPAASY 230
Query: 240 INGEVIRIDGAL 251
           I G+   IDG +
Sbjct: 231 ITGQAFTIDGGI 242

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 46  KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
           K LG D   +  +V   +  ++A    K   G++DV VN AGI+   +   + K T    
Sbjct: 59  KALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT---RDVVFRKMT---R 112
Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
           +D++ ++  N    FNV +   Q+I  + + E G  G IIN +S+   +GQ GQ  YS +
Sbjct: 113 EDWQAVIDTNLTSLFNVTK---QVI--DGMVERGW-GRIINISSVNGQKGQFGQTNYSTA 166
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD 225
           K+GI G T+ +A+++A  G+ VNT++PG   T ++  +   V   +  +IP  +RLG PD
Sbjct: 167 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPV-RRLGSPD 225
Query: 226 EFAQLVQSIITNP--LINGEVIRIDGALRM 253
           E   +V  + +       G    ++G L M
Sbjct: 226 EIGSIVAWLASEESGFSTGADFSLNGGLHM 255

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V LV+GGA G G +               D+   EG++ A EL    ++  +DVT 
Sbjct: 5   LTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVHLDVTQ 64
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVNTVGT 119
               + AV     +FG L V VN AGI         N GT+  ++L +++RIL VN  G 
Sbjct: 65  PAQWKAAVDTAVTAFGGLHVLVNNAGI--------LNIGTIEDYALTEWQRILDVNLTGV 116
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA---YSASKSGIVGMTLPM 176
           F   R         K  ++  RG IIN +SI   EG +G VA   Y+A+K  + G+T   
Sbjct: 117 FLGIRAVV------KPXKEAGRGSIINISSI---EGLAGTVACHGYTATKFAVRGLTKST 167
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           A +L  +GIRVN+I PGL  TP    + E +         A  R   P E + LV
Sbjct: 168 ALELGPSGIRVNSIHPGLVKTPXTDWVPEDIFQ------TALGRAAEPVEVSNLV 216

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 22/256 (8%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA----KELGPDVKFAPVDVTS 61
           V  VTGG  GLG A             +     ++  S      ++ G D K   VDV  
Sbjct: 27  VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD 86
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E  ++        FGK+DV +N AGI+         KG      D+  ++  +    FN
Sbjct: 87  FESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKG------DWDAVMRTDLDAMFN 140
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V +     + E +       G I+N  S+    G  GQ  Y+++K+GI G T  +A + A
Sbjct: 141 VTKQFIAGMVERRF------GRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETA 194
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA--PQRLGHPDEFAQLVQSIITNP- 238
             GI VNT++PG   T ++  + + V    A+ +P     RLG PDE A L+  + ++  
Sbjct: 195 KRGITVNTVSPGYLATAMVEAVPQDV--LEAKILPQIPVGRLGRPDEVAALIAFLCSDDA 252
Query: 239 -LINGEVIRIDGALRM 253
             + G  + I+G + M
Sbjct: 253 GFVTGADLAINGGMHM 268

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V +VTGGA  +G A             + DL  +      ++L   G DV    +DVT+ 
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT 74
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           E VQ AV    +  G++D+ V CAGI C  ++    K    +   + + + +N  G F  
Sbjct: 75  ESVQNAVRSVHEQEGRVDILVACAGI-CISEV----KAEDMTDGQWLKQVDINLNGMFRS 129
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAY--EGQSGQVAYSASKSGIVGMTLPMARDL 180
            +   +++ E K      +GVI+   S++         Q AY+ASK+G+      +A + 
Sbjct: 130 CQAVGRIMLEQK------QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEW 183
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ-RLGHPDEFAQLVQSIITN-- 237
           A  GIR N +AP   +T L     EK   + A     P  R+G PDE A +VQ + ++  
Sbjct: 184 APHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAA 243
Query: 238 PLINGEVIRID 248
            L+ G ++ +D
Sbjct: 244 SLMTGAIVNVD 254

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+T  E V++A    +++ G ++V +  AG++    +   ++      +DF  ++  N  
Sbjct: 67  DITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSE------EDFTSVVETNLT 120
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           GTF V + + + +   K      +G ++  +S+    G +GQ  Y+ASK+G+VG    +A
Sbjct: 121 GTFRVVKRANRAMLRAK------KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLA 174
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           R+L    I  N +APG  DT +  +L ++ R  +   +P   R   P+E A  V+ + ++
Sbjct: 175 RELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPL-GRYARPEEIAATVRFLASD 233
Query: 238 --PLINGEVIRIDGALRM 253
               I G VI +DG L M
Sbjct: 234 DASYITGAVIPVDGGLGM 251

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLP----TSEGESVAKELGPDVKFAPV 57
           LKG   L+TGG SG+G+A             +  L      +E +   ++ G      P 
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D++ E+  +  V       G L++ VN        +   Y      + +  ++   +N  
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEY-----ITAEQLEKTFRINIF 159
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             F+V +  A L H  + +      VIINTASI AYEG    + YSA+K  IV  T  ++
Sbjct: 160 SYFHVTK--AALSHLKQGD------VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLS 211
Query: 178 RDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           + L   GIRVN +APG   TPL+ S  +EK  +    ++P  QR G P E A     + +
Sbjct: 212 QSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPM-QRPGQPYELAPAYVYLAS 270
Query: 237 --NPLINGEVIRIDGAL 251
             +  + G++I ++G +
Sbjct: 271 SDSSYVTGQMIHVNGGV 287

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 74  DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHEN 133
           +  G LD  VN AGI+    +           +D++ +L  N    F   R + +L+ + 
Sbjct: 76  EVLGGLDTLVNNAGITRDTLLVRMKD------EDWEAVLEANLSAVFRTTREAVKLMMKA 129
Query: 134 KLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
           +       G I+N  S+    G  GQ  Y ASK+G++G T  +A++ A  GI VN +APG
Sbjct: 130 RF------GRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPG 183
Query: 194 LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGAL 251
             +T +   L ++V+    + IPA  R G P+E A+ V  +++     I G+ + +DG L
Sbjct: 184 FIETEMTERLPQEVKEAYLKQIPA-GRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 21/253 (8%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKEL---GPDVKFAPVDVTSEE 63
           LVTG + G+G++             +    + E  E+V +E+   G D      +V   +
Sbjct: 14  LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADAD 73
Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN-V 122
           +V+  +      FG LDV VN AGI+    +    +      DD   ++  N  G FN +
Sbjct: 74  EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKE---QEWDD---VIDTNLKGVFNCI 127
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            + + Q++ +         G IIN +S+    G  GQ  Y A+K+G++G+T   AR+LA 
Sbjct: 128 QKATPQMLRQRS-------GAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 180
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLI 240
            GI VN +APG   + +   L+++++  +   IP   R G   + A  V  + ++    I
Sbjct: 181 RGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLA-RFGQDTDIANTVAFLASDKAKYI 239
Query: 241 NGEVIRIDGALRM 253
            G+ I ++G + M
Sbjct: 240 TGQTIHVNGGMYM 252

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 21/257 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLP----TSEGESVAKELGPDVKFAPV 57
           LKG   L+TGG SG+G+A             +  L      +E +   ++ G      P 
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D++ E+  +  V       G L++ VN        +   Y      + +  ++   +N  
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEY-----ITAEQLEKTFRINIF 159
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             F+V +  A L H  + +      VIINTASI AYEG    + YSA+K  IV  T  ++
Sbjct: 160 SYFHVTK--AALSHLKQGD------VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLS 211
Query: 178 RDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           + L   GIRVN +APG   TPL+ S  +EK  +    ++P  QR G P E A     + +
Sbjct: 212 QSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPX-QRPGQPYELAPAYVYLAS 270
Query: 237 --NPLINGEVIRIDGAL 251
             +  + G+ I ++G +
Sbjct: 271 SDSSYVTGQXIHVNGGV 287

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 15/255 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG   G+G+A             L      + + +A +LG DV     +++ 
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSD 84
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            + +++   + +     +D+ VN AGI+                 D+  +L VN      
Sbjct: 85  RKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQD------QDWDDVLAVNLTAAST 138
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + R   +LIH          G IIN  SI    G  GQ  Y A+K+G++G +  +A+++A
Sbjct: 139 LTR---ELIHSMMRRR---YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIA 192
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDE--FAQLVQSIITNPL 239
              I VN IAPG   + +   LNEK +  +   IP  +R+G  +E  FA +  +      
Sbjct: 193 SRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPM-KRMGIGEEIAFATVYLASDEAAY 251
Query: 240 INGEVIRIDGALRMI 254
           + G+ + I+G + MI
Sbjct: 252 LTGQTLHINGGMAMI 266

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 113/248 (45%), Gaps = 31/248 (12%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTGG+SG+G A                L   + + V     P ++   +D+T  + +Q+
Sbjct: 15  LVTGGSSGIGAAIAMQFAELGAEVVALGL---DADGVHAPRHPRIRREELDITDSQRLQR 71
Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
                 ++  +LDV VN AGIS             + L  F+R+L +N       ++L+ 
Sbjct: 72  LF----EALPRLDVLVNNAGIS--------RDREEYDLATFERVLRLNLSAAMLASQLAR 119
Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
            L+ +         G I+N AS+ +  G + + AYSASK  IV +T  +A + A   IRV
Sbjct: 120 PLLAQRG-------GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRV 172
Query: 188 NTIAPGLFDTPLLSMLN---EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP---LIN 241
           N IAPG  DTPL + L    E  R  + R+  A  R G   E A    + +  P    + 
Sbjct: 173 NAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA--RWGEAPEVAS-AAAFLCGPGASFVT 229
Query: 242 GEVIRIDG 249
           G V+ +DG
Sbjct: 230 GAVLAVDG 237

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 25/258 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   L+TG +SG+G A             +      + +S+   L  +      ++ +
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISC---AFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           +E+     L+ K S   LD+ V  AGI+    A ++ +          DF +++ +N   
Sbjct: 72  KEECSN--LISKTS--NLDILVCNAGITSDTLAIRMKD---------QDFDKVIDINLKA 118
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F + R + + + + +       G IIN +SI    G  GQ  Y ASK+G++GMT  ++ 
Sbjct: 119 NFILNREAIKKMIQKRY------GRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSY 172
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN- 237
           ++A  GI VN +APG   + +   LNEK R  + + IP     G P++ A  V  + +N 
Sbjct: 173 EVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGT-YGIPEDVAYAVAFLASNN 231
Query: 238 -PLINGEVIRIDGALRMI 254
              I G+ + ++G + M+
Sbjct: 232 ASYITGQTLHVNGGMLMV 249

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 26/257 (10%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA---KELGPDVKFAPVDVTSE 62
           V +VTG + G+G+A                   +  E +    K+ G + + A ++V   
Sbjct: 30  VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA 89
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGIS---CAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
             V   V      FG L+V VN AGI+    A ++ +         D++  ++  N    
Sbjct: 90  TAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKD---------DEWDAVIDTNLKAV 140
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F ++R   + + + +       G I+N  S+    G  GQV Y+A+K+G+ GMT  +AR+
Sbjct: 141 FRLSRAVLRPMMKAR------GGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALARE 194
Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
           +   GI VN +APG  DT +   L ++ +  L   IP   RLG P++ A  V + + +P 
Sbjct: 195 IGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLG-RLGSPEDIAHAV-AFLASPQ 252
Query: 239 --LINGEVIRIDGALRM 253
              I G  + ++G + M
Sbjct: 253 AGYITGTTLHVNGGMFM 269

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 103/236 (43%), Gaps = 19/236 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTGGASG+G                 D+  + G+ +A ELG    F   DV+S
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS 63
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E D    +   +   G L+V VN AGI     +          L+DF R+L +NT   F 
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDM------ETGRLEDFSRLLKINTESVFI 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL- 180
             +     + E         G IIN AS++++        YSASK+ +  +T   A    
Sbjct: 118 GCQQGIAAMKETG-------GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR 170
Query: 181 -AGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGH---PDEFAQLV 231
             G  IRVN+I P    TP++ + L + V   +    P   R G    P+  AQLV
Sbjct: 171 KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLV 226

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 123/258 (47%), Gaps = 22/258 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V L+TG  SG G+              + D   +  E VA E+G        D++ 
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISK 66
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E DV  AV      FGK+D+ VN AGI             +   ++F RI+ VN  G + 
Sbjct: 67  EADVDAAVEAALSKFGKVDILVNNAGIG-----HKPQNAELVEPEEFDRIVGVNVRGVY- 120
Query: 122 VARLSAQLIHENKLNEDGLRG---VIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
              ++++LI   K  E+G +G   VI+N AS  A   +     Y+A+K  +V +T  +A 
Sbjct: 121 --LMTSKLIPHFK--ENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAI 176
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
           +LA A IRV  + P   +TPLL+      +E++R     SIP   RL  PD+ A+   + 
Sbjct: 177 ELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM-GRLLKPDDLAE-AAAF 234
Query: 235 ITNP---LINGEVIRIDG 249
           + +P   +I G  + +DG
Sbjct: 235 LCSPQASMITGVALDVDG 252

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG-PD-VKFAPVDV 59
           L G V ++TGG  G+G A             + D  +  GE  AK +G PD ++F   D 
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHDS 63
Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD-DFKRILLVNTVG 118
           + E+   K     + +FG +   VN AGI+        NK    +   +++++L VN  G
Sbjct: 64  SDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-------NKSVEETTTAEWRKLLAVNLDG 116
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F   RL  Q     ++   GL   IIN +SI  + G     AY+ASK  +  M+   A 
Sbjct: 117 VFFGTRLGIQ-----RMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAAL 171
Query: 179 D--LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           D  L    +RVNT+ PG   TPL+  L         R+      +G P++ A +   + +
Sbjct: 172 DCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231
Query: 237 N--PLINGEVIRIDG 249
           N      G    +DG
Sbjct: 232 NESKFATGSEFVVDG 246

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 113/254 (44%), Gaps = 16/254 (6%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+  V ++TG   G+G  T            L DLP ++    A  +G       VD+T+
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTN 68
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E  V+  +    D+FG+LD+  N A  S    +    + TV   DD      VN  GT  
Sbjct: 69  EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADML-VTQMTVDVWDD---TFTVNARGTML 124
Query: 122 VARLS-AQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           + + +  +LI           G I+N +S  A+       AY+ +K+ I  +T  +A   
Sbjct: 125 MCKYAIPRLISAGG-------GAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQY 177
Query: 181 AGAGIRVNTIAPGLFDTPLLSM-LNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
              G+R N IAPGL  TP L + L + + +  A    A  R+G P E A+LV  + ++  
Sbjct: 178 GRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA-GRIGEPHEIAELVCFLASDRA 236
Query: 238 PLINGEVIRIDGAL 251
             I G+VI  D  L
Sbjct: 237 AFITGQVIAADSGL 250

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 18/250 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG ASG+G+A               D            L  +      DV+ 
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD 63
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            + V+       + FG+L    + AG++ +   +N        L+ ++++L VN  G+F 
Sbjct: 64  PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNL------PLEAWEKVLRVNLTGSFL 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           VAR + +++ E         G ++ T S+A   G  G   Y+A K G+VG+   +A +LA
Sbjct: 118 VARKAGEVLEEG--------GSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELA 168
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL 239
             G+RVN + PGL  TP+ + L          + P   R G P+E AQ    +++  +  
Sbjct: 169 RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAY 227
Query: 240 INGEVIRIDG 249
           I G+ + +DG
Sbjct: 228 ITGQALYVDG 237

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK----ELGPDVKFAPV 57
           LK  V ++TGG++GLG+A             +      E    AK    E G        
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           DVT EEDV   V      FG LDV +N AG+         N    H  SLD++ +++  N
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVE--------NPVPSHELSLDNWNKVIDTN 124
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G F  +R + +   EN +     +G +IN +S+         V Y+ASK G+  MT  
Sbjct: 125 LTGAFLGSREAIKYFVENDI-----KGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTET 179
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           +A + A  GIRVN I PG  +TP+      + V+     S+     +G P+E A
Sbjct: 180 LALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVA 233

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK----ELGPDVKFAPV 57
           LK  V ++TGG++GLG+A             +      E    AK    E G        
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           DVT EEDV   V      FG LDV +N AG+         N    H  SLD++ +++  N
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVE--------NPVPSHELSLDNWNKVIDTN 124
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G F  +R + +   EN +     +G +IN +S+         V Y+ASK G+  MT  
Sbjct: 125 LTGAFLGSREAIKYFVENDI-----KGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTET 179
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           +A + A  GIRVN I PG  +TP+      + V+     S+     +G P+E A
Sbjct: 180 LALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVA 233

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK----ELGPDVKFAPV 57
           LK  V ++TGG++GLG+A             +      E    AK    E G        
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           DVT EEDV   V      FG LDV +N AG+         N    H  SLD++ +++  N
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVE--------NPVPSHELSLDNWNKVIDTN 124
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G F  +R + +   EN +     +G +IN +S+         V Y+ASK G+  MT  
Sbjct: 125 LTGAFLGSREAIKYFVENDI-----KGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTET 179
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           +A + A  GIRVN I PG  +TP+      + V+     S+     +G P+E A
Sbjct: 180 LALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVA 233

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 33  LCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAF 92
           +CD   S G ++ +EL P   F   DVT E+DV+  V      FG+LD  VN AG     
Sbjct: 38  ICDKDESGGRALEQEL-PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP 96
Query: 93  KIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA 152
           +     +    S   F+++L +N +GT+ + +L+   + +++       G +IN +S+  
Sbjct: 97  Q-----RPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-------GNVINISSLVG 144
Query: 153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML 203
             GQ+  V Y A+K  +  MT  +A D +  G+RVN I+PG   TPL   L
Sbjct: 145 AIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL 195

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 46  KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
           +  G DV  +  DVTS ++V  AV    + FG + + VN AG +          G    L
Sbjct: 69  RAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRN--------GGGETADL 120
Query: 106 DD--FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS 163
           DD  +  +L  N  G F V R   +++    + E G  G I+N AS    +G      Y+
Sbjct: 121 DDALWADVLDTNLTGVFRVTR---EVLRAGGMREAGW-GRIVNIASTGGKQGVMYAAPYT 176
Query: 164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ---- 219
           ASK G+VG T  +  +LA  GI VN + PG  +TP+     E+VR   AR     +    
Sbjct: 177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMA----ERVREGYARHWGVTEQEVH 232
Query: 220 ----------RLGHPDEFAQLVQSIITNPL--INGEVIRIDGAL 251
                     R   P+E A LV  ++T+    I  + + + G L
Sbjct: 233 ERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 33  LCDLPTSEGESVAKELG-PDV-KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGI-- 88
           + D+    G+ V   +G PDV  F   DVT +EDV+  V       GKLD+     G+  
Sbjct: 45  IADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLS 104
Query: 89  SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA 148
           +  + I           +DFKR++ +N  G F VA+ +A+++   K      +G I+ TA
Sbjct: 105 TTPYSILEAGN------EDFKRVMDINVYGAFLVAKHAARVMIPAK------KGSIVFTA 152
Query: 149 SIAAYE-GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
           SI+++  G+     Y+A+K  ++G+T  +  +L   GIRVN ++P +  +PLL+
Sbjct: 153 SISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT 206

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 37/257 (14%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTS-----EGESVAKELGPDVKFAP 56
           LK  V L+TG  +GLGK              + D   +     E ++   E  PD     
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQH--- 376
Query: 57  VDVTSE-EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
            DV  + E + K V+   D +G +D+ VN AGI    +  ++ K +    D  +++ L+ 
Sbjct: 377 -DVAKDSEAIIKNVI---DKYGTIDILVNNAGI---LRDRSFAKMSKQEWDSVQQVHLI- 428
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             GTFN++RL+     E +       G IIN  S +   G  GQ  YS+SK+GI+G++  
Sbjct: 429 --GTFNLSRLAWPYFVEKQF------GRIINITSTSGIYGNFGQANYSSSKAGILGLSKT 480
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           MA + A   I+VN +AP       LS++ E+ +N           L H D+ A L+  + 
Sbjct: 481 MAIEGAKNNIKVNIVAPHAETAMTLSIMREQDKN-----------LYHADQVAPLLVYLG 529
Query: 236 TNPL-INGEVIRIDGAL 251
           T+ + + GE   I G  
Sbjct: 530 TDDVPVTGETFEIGGGW 546

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46  KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGI---SCAFKIFNYNKGTV 102
           +E G        D  SE D  +A+     S G L   VN AG+     A K+        
Sbjct: 75  EEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKM-------- 126
Query: 103 HSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY 162
              +DF  ++  N    F   R + +++ +++       G ++N ASI    G  GQ  Y
Sbjct: 127 -KTEDFHHVIDNNLTSAFIGCREALKVMSKSRF------GSVVNVASIIGERGNMGQTNY 179
Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLG 222
           SASK G++ M+   A + A   IR N++ PG  +T + + L ++++    ++IP   RLG
Sbjct: 180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIP-LNRLG 238
Query: 223 HPDEFAQLVQSIITN--PLINGEVIRIDGALRM 253
              E A+ V  ++++    I GE ++++G L M
Sbjct: 239 SAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM 271

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----KELGPDVKFAP 56
           L+G V ++TG ++GLGK +            + +  + E E+ +     K++G +     
Sbjct: 5   LEGKVVVITGSSTGLGK-SMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
            DVT E DV   V      FGKLDV +N AG+         N  + H  SL D+ +++  
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLE--------NPVSSHEMSLSDWNKVIDT 115
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N  G F  +R + +   EN +     +G +IN +S+         V Y+ASK G+  MT 
Sbjct: 116 NLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTK 170
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
            +A + A  GIRVN I PG  +TP+ +    + + R  +   IP    +G P+E A +  
Sbjct: 171 TLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAA 229
Query: 233 SIITN--PLINGEVIRIDGALRM 253
            + ++    + G  +  DG + +
Sbjct: 230 WLASSEASYVTGITLFADGGMTL 252

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 26/261 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----KELGPDVKFAP 56
           L+G V ++TG ++GLGK +            + +  + E E+ +     K++G +     
Sbjct: 5   LEGKVVVITGSSTGLGK-SMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
            DVT E DV   V      FGKLDV +N AG++        N  + H  SL D+ +++  
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLA--------NPVSSHEMSLSDWNKVIDT 115
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N  G F  +R + +   EN +     +G +IN +S+         V Y+ASK G+  MT 
Sbjct: 116 NLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTE 170
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
            +A + A  GIRVN I PG  +TP+ +    + + R  +   IP    +G P+E A +  
Sbjct: 171 TLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAA 229
Query: 233 SIITN--PLINGEVIRIDGAL 251
            + ++    + G  +  DG +
Sbjct: 230 WLASSEASYVTGITLFADGGM 250

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----KELGPDVKFAP 56
           L+G V ++TG ++GLGK +            + +  + E E+ +     K++G +     
Sbjct: 5   LEGKVVVITGSSTGLGK-SMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
            DVT E DV   V      FGKLDV +N AG+         N  + H  SL D+ +++  
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLE--------NPVSSHEMSLSDWNKVIDT 115
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N  G F  +R + +   EN +     +G +IN +S+         V Y+ASK G+  MT 
Sbjct: 116 NLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTE 170
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
            +A + A  GIRVN I PG  +TP+ +    + + R  +   IP    +G P+E A +  
Sbjct: 171 TLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAA 229
Query: 233 SIITN--PLINGEVIRIDGALRM 253
            + ++    + G  +  DG + +
Sbjct: 230 WLASSEASYVTGITLFADGGMTL 252

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 14/258 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGP--DVKFAPVDV 59
           L G + LVTGG+ G+G+              +C          A  L    D +  P D+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86
Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           +SE   ++      +   +LD+ VN AG S    + +Y       +  +++++ +N    
Sbjct: 87  SSEAGARRLAQALGELSARLDILVNNAGTSWGAALESY------PVSGWEKVMQLNVTSV 140
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMTLPMAR 178
           F+  +    L+  +   E+  R  +IN  S+A       Q  AY  SK+ +  ++  +A+
Sbjct: 141 FSCIQQLLPLLRRSASAENPAR--VINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAK 198
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ-RLGHPDEFAQLVQSI--I 235
           +L G  I VN IAPG F + +   +    +   A S   P  R G P+E A L  S+   
Sbjct: 199 ELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGT 258
Query: 236 TNPLINGEVIRIDGALRM 253
               + G VI IDG   +
Sbjct: 259 AGAYMTGNVIPIDGGFHL 276

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 47/265 (17%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----------------KELGP 50
           LVTGG+ G+G A             +C L   +G  V                   E G 
Sbjct: 30  LVTGGSRGIGAA-------------VCRLAARQGWRVGVNYAANREAADAVVAAITESGG 76
Query: 51  DVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNY-NKGTVHSLDDFK 109
           +    P DV +  D+          FG+LD  VN AGI       +Y  +    S++  +
Sbjct: 77  EAVAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGI------VDYPQRVDEXSVERIE 130
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSG 168
           R L VN  G+   A   A+ +        G  G I+N +S AA  G + Q V Y+ASK+ 
Sbjct: 131 RXLRVNVTGSILCA---AEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAA 187
Query: 169 IVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPAPQRLGHPDE 226
           I   T+ +AR++A  GIRVN + PG+ +T L +   L ++ R   A S+P  QR G P+E
Sbjct: 188 IDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRARE-XAPSVPX-QRAGXPEE 245
Query: 227 FAQLVQSII--TNPLINGEVIRIDG 249
            A  +  ++  +   + G ++ + G
Sbjct: 246 VADAILYLLSPSASYVTGSILNVSG 270

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 18/257 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G V LVTG + G+G+A                   S  E +A+ L   G +     +D
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLD 84
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V+S+E V   +   +   G+  + VN AGI+            +  + D +   +VNT  
Sbjct: 85  VSSDESVAATLEHIQQHLGQPLIVVNNAGIT--------RDNLLVRMKDDEWFDVVNT-N 135
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
             ++ RLS  ++           G IIN  S+    G +GQ  Y+A+K+G+ G T  +AR
Sbjct: 136 LNSLYRLSKAVLRGMT---KARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAR 192
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN- 237
           ++    I VN +APG  DT +   L E  R  L   IP   RLG  +E A++V  + ++ 
Sbjct: 193 EVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLG-RLGQAEEIAKVVGFLASDG 251
Query: 238 -PLINGEVIRIDGALRM 253
              + G  + ++G + M
Sbjct: 252 AAYVTGATVPVNGGMYM 268

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 26/261 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----KELGPDVKFAP 56
           L+G V ++TG ++GLGK +            + +  + E E+ +     K++G +     
Sbjct: 5   LEGKVVVITGSSTGLGK-SMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
            DVT E DV   V      FGKLDV +N AG+         N  + H  SL D+ +++  
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLE--------NPVSSHEMSLSDWNKVIDT 115
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N  G F  +R + +   EN +     +G +IN +S+         V Y+ASK G+  MT 
Sbjct: 116 NLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTE 170
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
            +A + A  GIRVN I PG  +TP+ +    + + R  +   IP    +G P+E A +  
Sbjct: 171 TLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAA 229
Query: 233 SIITNP--LINGEVIRIDGAL 251
            + ++    + G  +  DG +
Sbjct: 230 WLASSEASYVTGITLFADGGM 250

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 117/260 (45%), Gaps = 32/260 (12%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           M +GV+  VTGG  G+GK                D+        AKE  P++ +   DV 
Sbjct: 1   MNRGVI--VTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-PNLFYFHGDVA 57
Query: 61  SEEDVQKAVLLCKDSFGKLDVNVN--CAGISCAFKIFNYNKGTVHSL--DDFKRILLVNT 116
               ++K V    +   ++DV VN  C G          +KG + SL  ++F  IL V  
Sbjct: 58  DPLTLKKFVEYAMEKLQRIDVLVNNACRG----------SKGILSSLLYEEFDYILSVGL 107
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              + ++RL    + +NK       G IIN AS  A++ +    AY+++K GIV +T  +
Sbjct: 108 KAPYELSRLCRDELIKNK-------GRIINIASTRAFQSEPDSEAYASAKGGIVALTHAL 160
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           A  L G  + VN IAPG  +        ++       +IPA  ++G P + + +V  +  
Sbjct: 161 AMSL-GPDVLVNCIAPGWINVTEQQEFTQED----CAAIPAG-KVGTPKDISNMVLFLCQ 214
Query: 237 NPLINGEVIRIDGAL--RMI 254
              I GE I +DG +  RMI
Sbjct: 215 QDFITGETIIVDGGMSKRMI 234

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 23/263 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LK  V +VTG  SG+G+A               +L       + +EL   G +V     D
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNT 116
           V+ ++DV++ V    +++ ++DV  N AGI             V  + D  ++R+L VN 
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVT-------PVAEVSDELWERVLAVNL 117
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              F  +R    ++ +        +GVI+NTASIA   G      Y+ +K G++G+T  +
Sbjct: 118 YSAFYSSRAVIPIMLKQG------KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSI 171
Query: 177 ARDLAGAGIRVNTIAPGLFDTPL---LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
           A      GIR   + PG   T +    S  +E     L + +    RL  P++ A ++  
Sbjct: 172 AAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVF 231
Query: 234 IITN--PLINGEVIRIDGALRMI 254
           + ++    +NG+ + +DG L ++
Sbjct: 232 LASDEASFVNGDAVVVDGGLTVL 254

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 110/255 (43%), Gaps = 19/255 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG-PD-VKFAPVDV 59
           L G V ++TGG  G+G A             +    +  GE  AK +G PD ++F   D 
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63
Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD-DFKRILLVNTVG 118
           + E+   K     + +FG +   VN AGI+        NK    +   +++++L VN  G
Sbjct: 64  SDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-------NKSVEETTTAEWRKLLAVNLDG 116
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F   RL  Q     ++   GL   IIN +SI  + G     AY+ASK  +  M+   A 
Sbjct: 117 VFFGTRLGIQ-----RMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAAL 171
Query: 179 D--LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           D  L    +RVNT+ PG   TPL+  L         R+      +G P++ A +   + +
Sbjct: 172 DCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231
Query: 237 N--PLINGEVIRIDG 249
           N      G    +DG
Sbjct: 232 NESKFATGSEFVVDG 246

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 35/258 (13%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVK-----FA 55
           M+ G V LVTG A G+G+A             L D     G      L    +     F 
Sbjct: 4   MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFI 63
Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DV  ++ ++       D FG+LD+ VN AG              V++  ++++ L +N
Sbjct: 64  QCDVADQQQLRDTFRKVVDHFGRLDILVNNAG--------------VNNEKNWEKTLQIN 109
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT-- 173
            V   +   L   L + +K N  G  G+IIN +S+A     + Q  Y ASK GIVG T  
Sbjct: 110 LVSVISGTYLG--LDYMSKQN-GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 166
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ- 232
             +A +L  +G+R+N I PG  +T +L  + EK  N         Q + + D    +++ 
Sbjct: 167 AALAANLMNSGVRLNAICPGFVNTAILESI-EKEENM-------GQYIEYKDHIKDMIKY 218
Query: 233 -SIITNPLI-NGEVIRID 248
             I+  PLI NG +  I+
Sbjct: 219 YGILDPPLIANGLITLIE 236

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKEL---GPDVKFAPVDVTSEE 63
           LVTG + G+G++             +    + E  E+V +E+   G D      +V   +
Sbjct: 8   LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADAD 67
Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN-V 122
           +V+  +      FG LDV VN AGI+    +    +      DD   ++  N  G FN +
Sbjct: 68  EVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKE---QEWDD---VIDTNLKGVFNCI 121
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            + + Q + +         G IIN +S+    G  GQ  Y A+K+G++G+T   AR+LA 
Sbjct: 122 QKATPQXLRQRS-------GAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 174
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLI 240
            GI VN +APG   +     L+++++      IP   R G   + A  V  + ++    I
Sbjct: 175 RGITVNAVAPGFIVSDXTDALSDELKEQXLTQIPLA-RFGQDTDIANTVAFLASDKAKYI 233
Query: 241 NGEVIRIDG 249
            G+ I ++G
Sbjct: 234 TGQTIHVNG 242

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCD-----------LPTSE--GESVA--K 46
            +G   L+TGGA G+G++             +CD           L T++   E+VA  +
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 47  ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
           + G     A VDV     ++  V   +D+ G +D+ +  AGIS    +            
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESA------ 121
Query: 107 DFKRILLVNTVGTFN-VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
            +  ++  N  GTFN +A ++  +I  N        G I+  +S+  +     Q +Y +S
Sbjct: 122 QWDEVIGTNLTGTFNTIAAVAPGMIKRN-------YGRIVTVSSMLGHSANFAQASYVSS 174
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL 199
           K G++G+T   A DL G GI VN +APG  +TP+
Sbjct: 175 KWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPM 208

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 29/264 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGES---VAKELGPDVKFAPVD 58
           LKG   LVTGG+ G+G A              C     E +    + +E G +V+ +  D
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 59  VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           + S  +  K +      F GKL++ VN AG+    +  ++ +       D+  I+  N  
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE------KDYNIIMGTNFE 132
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             +++++++  L+  ++       G +I  +SIA +        YSASK  I  MT  +A
Sbjct: 133 AAYHLSQIAYPLLKASQ------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLA 186
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML-------NEKVRNFLARSIPAPQ-RLGHPDEFAQ 229
            + A   IRVN++APG+  TPL+           E++ NF+ ++   P  R G P E + 
Sbjct: 187 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT---PMGRAGKPQEVSA 243
Query: 230 LVQSII--TNPLINGEVIRIDGAL 251
           L+  +       I G++I  DG  
Sbjct: 244 LIAFLCFPAASYITGQIIWADGGF 267

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 113/265 (42%), Gaps = 25/265 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   +VTGG+ G+G A             + DL     ++V   L        VDVT 
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTK 69
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
              V  A+    D+ G  D+    AG+S      +         +++     VN  G F 
Sbjct: 70  RASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITD------EEWDFNFDVNARGVF- 122
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
              L+ Q+   + L  +  +GVI+NTAS+AA  G      YSASK  + G T  +AR++A
Sbjct: 123 ---LANQIACRHFLASN-TKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMA 178
Query: 182 GAGIRVNTIAPG-----------LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
              IRVN + PG           +++  L  M  E VR       P   R+  P++ A +
Sbjct: 179 PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL-GRIEEPEDVADV 237
Query: 231 VQSIITNP--LINGEVIRIDGALRM 253
           V  + ++    + G+ I + G +RM
Sbjct: 238 VVFLASDAARFMTGQGINVTGGVRM 262

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 110/256 (42%), Gaps = 21/256 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTS---EGESVAKELGPDVKFAPVD 58
           L G   LVTG A GLG A             L D+  +   E        G D      D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNTV 117
           VT E  ++ A          +D+ +N AGI        Y K  V   L+++++++  N  
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGI-------QYRKPMVELELENWQKVIDTNLT 119
Query: 118 GTFNVARLSAQ-LIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
             F V+R +A+ +I  N        G IIN  S+ +   +     Y+A+K GI  +T  M
Sbjct: 120 SAFLVSRSAAKRMIARNS------GGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSM 173
Query: 177 ARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEF--AQLVQS 233
           A + A   I+ N I PG   T +  +++ +K  +   +S    QR G P+E     +  S
Sbjct: 174 AAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLS 233
Query: 234 IITNPLINGEVIRIDG 249
              +  ING++I +DG
Sbjct: 234 SKASDYINGQIIYVDG 249

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 28/262 (10%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG   G+GKA             + D   +  ++VA E+   G       VDV+  
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           + V  AV   + + G  DV VN AG++ +  I +     V       ++  +N  G    
Sbjct: 64  DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD------KVYNINVKGVIWG 117
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            + + +        ++G  G IIN  S A + G      YS+SK  + G+T   ARDLA 
Sbjct: 118 IQAAVE-----AFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 172
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ----------RLGHPDEFAQLVQ 232
            GI VN   PG+  TP+ + ++ +V     + +              RL  P++ A  V 
Sbjct: 173 LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACV- 231
Query: 233 SIITNP---LINGEVIRIDGAL 251
           S + +P    + G+ + IDG +
Sbjct: 232 SYLASPDSDYMTGQSLLIDGGM 253

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFA---PVDVTSE 62
           VG+VTG   G+G+A             + D+     E+VAK++  D   A    VDV+  
Sbjct: 11  VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP 70
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
           E  +         FG +D  VN A I    K+       + ++D   +K+ + VN  G  
Sbjct: 71  ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKL-----DFLLTIDPEYYKKFMSVNLDGAL 125
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R     +++      G  G I+N +S AA+   +    Y  +K GI G+T  ++R+L
Sbjct: 126 WCTRA----VYKKMTKRGG--GAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSREL 176
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEK-VRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
            G  IR+N IAPG  DT        K + + + + +P   R+G PD+   +   ++++  
Sbjct: 177 GGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPL-SRMGTPDDLVGMCLFLLSDEA 235
Query: 238 PLINGEVIRIDG 249
             I G++  +DG
Sbjct: 236 SWITGQIFNVDG 247

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 20/256 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V +VTG  +G+G A               D+     ++ A ++G       VDV+ 
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSD 86
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+ +   V  C  +FG +D  V  AG+     + +       +++DF R++ +N  G + 
Sbjct: 87  EQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT------TVEDFDRVIAINLRGAWL 140
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             + +A  + E         G I+N +S+A      G  AY  SK+GI+ ++   A +L 
Sbjct: 141 CTKHAAPRMIERG------GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR 194
Query: 182 GAGIRVNTIAPGLFDTPL----LSMLNEKVRNFLARSIPA--PQRLGHPDEFAQLVQSII 235
            +GIR NT+ P   DTP+    ++M +  +    ARS+ A    R+  P+E A +V  ++
Sbjct: 195 SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLL 254
Query: 236 TN--PLINGEVIRIDG 249
           ++   +I G     DG
Sbjct: 255 SDDASMITGTTQIADG 270

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 42  ESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGT 101
           E V KE G   K    DV++ + V K +       G +   +  AG+S           T
Sbjct: 56  EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV------KPAT 109
Query: 102 VHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLN-----EDGLRGVIINTASIAAYEGQ 156
             + +DF  +  VN  G FN  R  A+L  + +          +   IIN +S+    G 
Sbjct: 110 ELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL---NGS 166
Query: 157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP 216
             QV Y++SK+    +   +A + A AGIRVN ++PG  +T   + +++K+R+  A +IP
Sbjct: 167 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIP 226
Query: 217 APQRLGHPDE 226
              R   P+E
Sbjct: 227 L-NRFAQPEE 235

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   L+TG A G+G+A             + D+      + A E+GP      +DVT 
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTD 62
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           +  + + V    D +G +D+ VN A       +F+       + + + R+  +N  GT  
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAA------LFDLAPIVEITRESYDRLFAINVSGTLF 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + +  A+      +   G  G IIN AS A   G++    Y A+K+ ++ +T     +L 
Sbjct: 117 MMQAVAR-----AMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI 171
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNF 210
             GI VN IAPG+ D      ++ K  ++
Sbjct: 172 RHGINVNAIAPGVVDGEHWDGVDAKFADY 200

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
           L G V +VTG A G+G                 D+ ++     E+ +K  G  +     D
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 267
Query: 59  VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
           VT+++ V K     +D  G K D+ VN AGI+    + N        +DD  +  +L VN
Sbjct: 268 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 319
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
            +      RL+  L+    + E G    +I  +SIA   G  GQ  Y+ +K+G++G+T  
Sbjct: 320 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 373
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           +A  LA  GI +N +APG  +T + + +    R  + R + +  + G P + A+ + +  
Sbjct: 374 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 431
Query: 236 TNPLIN---GEVIRIDG 249
            +P  N   G VIR+ G
Sbjct: 432 ASPASNAVTGNVIRVCG 448

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
           L G V +VTG A G+G                 D+ ++     E+ +K  G  +     D
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 259
Query: 59  VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
           VT+++ V K     +D  G K D+ VN AGI+    + N        +DD  +  +L VN
Sbjct: 260 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 311
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
            +      RL+  L+    + E G    +I  +SIA   G  GQ  Y+ +K+G++G+T  
Sbjct: 312 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 365
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           +A  LA  GI +N +APG  +T + + +    R  + R + +  + G P + A+ + +  
Sbjct: 366 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 423
Query: 236 TNPLIN---GEVIRIDG 249
            +P  N   G VIR+ G
Sbjct: 424 ASPASNAVTGNVIRVCG 440

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 55  APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
           A  DV+    V++     +++FG +DV VN AGI     I             F R++ V
Sbjct: 82  AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAV------FDRVIAV 135
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N  GTFN  R +AQ +         + G IIN ++            Y+A+K+G+   T 
Sbjct: 136 NLKGTFNTLREAAQRLR--------VGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTH 187
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
            ++++L G  I VN +APG   T L L   +++VR+  A+  P  +RLG P + A  V +
Sbjct: 188 VLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPL-ERLGTPQDIAGAV-A 245
Query: 234 IITNP---LINGEVIRIDGAL 251
            +  P    +NG+V+R +G +
Sbjct: 246 FLAGPDGAWVNGQVLRANGGI 266

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
           L G V +VTG A G+G                 D+ ++     E+ +K  G  +     D
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 275
Query: 59  VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
           VT+++ V K     +D  G K D+ VN AGI+    + N        +DD  +  +L VN
Sbjct: 276 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 327
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
            +      RL+  L+    + E G    +I  +SIA   G  GQ  Y+ +K+G++G+T  
Sbjct: 328 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 381
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           +A  LA  GI +N +APG  +T + + +    R  + R + +  + G P + A+ + +  
Sbjct: 382 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 439
Query: 236 TNPLIN---GEVIRIDG 249
            +P  N   G VIR+ G
Sbjct: 440 ASPASNAVTGNVIRVCG 456

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
           L G V +VTG A G+G                 D+ ++     E+ +K  G  +     D
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 251
Query: 59  VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
           VT+++ V K     +D  G K D+ VN AGI+    + N        +DD  +  +L VN
Sbjct: 252 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 303
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
            +      RL+  L+    + E G    +I  +SIA   G  GQ  Y+ +K+G++G+T  
Sbjct: 304 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 357
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           +A  LA  GI +N +APG  +T + + +    R  + R + +  + G P + A+ + +  
Sbjct: 358 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 415
Query: 236 TNPLIN---GEVIRIDG 249
            +P  N   G VIR+ G
Sbjct: 416 ASPASNAVTGNVIRVCG 432

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 107/259 (41%), Gaps = 34/259 (13%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-------------PTSEGESV--AK 46
           L+G V  +TG A G G+                DL             P    E+V   +
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 47  ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
           E G  +     DV     +Q  V      FG +D+ V+  GIS        N+G V SL 
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS--------NQGEVVSLT 155
Query: 107 D--FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA 164
           D  +  IL  N +G ++  R          + E G  G +I  +S     G  GQ  Y+A
Sbjct: 156 DQQWSDILQTNLIGAWHACRAVLP-----SMIERGQGGSVIFVSSTVGLRGAPGQSHYAA 210
Query: 165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHP 224
           SK G+ G+ L +A ++    IRVN++ PG  +T +   LNEK+       +  P R    
Sbjct: 211 SKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM--ALNEKLLKMFLPHLENPTREDAA 268
Query: 225 DEFAQLVQSIITNPLINGE 243
           + F+QL  +++  P +  E
Sbjct: 269 ELFSQL--TLLPIPWVEPE 285

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 26/260 (10%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCD--LPT--SEGESVAKELGPDVKFAP 56
           +L+  V  +TGG SG+G               +    LP   +    +A   G       
Sbjct: 24  LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLS 83
Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAG--ISCAFKIFNYNKGTVHSLDDFKRILLV 114
           +DV +   V  AV      FG++D+ +NCA     C     ++N         FK ++ +
Sbjct: 84  MDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNA--------FKTVMDI 135
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           +T GTFNV+R+    ++E    + G  GVI+N  +     GQ+ QV   ++K+ +  MT 
Sbjct: 136 DTSGTFNVSRV----LYEKFFRDHG--GVIVNITATLGNRGQALQVHAGSAKAAVDAMTR 189
Query: 175 PMARDLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARSIPAP-QRLGHPDEFAQLVQ 232
            +A +     IRVN++APG +  T  L  L     +   +   +P QRLG+  E A  V 
Sbjct: 190 HLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVL 249
Query: 233 SIITNPL---INGEVIRIDG 249
             + +PL   + G V+  DG
Sbjct: 250 -YLASPLASYVTGAVLVADG 268

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
           L G V +VTG A G+G                 D+ ++     E+ +K  G  +     D
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 288
Query: 59  VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
           VT+++ V K     +D  G K D+ VN AGI+    + N        +DD  +  +L VN
Sbjct: 289 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 340
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
            +      RL+  L+    + E G    +I  +SIA   G  GQ  Y+ +K+G++G+T  
Sbjct: 341 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 394
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           +A  LA  GI +N +APG  +T + + +    R  + R + +  + G P + A+ + +  
Sbjct: 395 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 452
Query: 236 TNPLIN---GEVIRIDG 249
            +P  N   G VIR+ G
Sbjct: 453 ASPASNAVTGNVIRVCG 469

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G   LVTGG+ G+G                C     E      +    G  V+ +  D
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66
Query: 59  VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           ++S  + Q+ +    + F GKL++ VN AGI        Y +   ++++D+  I+ +N  
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIVI------YKEAKDYTVEDYSLIMSINFE 120
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             ++++ L+   +  ++      RG ++  +S++       +  Y A+K  +  +T  +A
Sbjct: 121 AAYHLSVLAHPFLKASE------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 174
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLV 231
            + A   IRVN + PG+  T L+ M        E +   + R   A +R+G P E A +V
Sbjct: 175 FEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC--ALRRMGEPKELAAMV 232
Query: 232 QSII--TNPLINGEVIRIDGAL 251
             +       + G++I +DG L
Sbjct: 233 AFLCFPAASYVTGQIIYVDGGL 254

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G   LVTGG+ G+G                C     E      +    G  V+ +  D
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 59  VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           ++S  + Q+ +    + F GKL++ VN AGI        Y +   ++++D+  I+ +N  
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVI------YKEAKDYTVEDYSLIMSINFE 119
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             ++++ L+   +  ++      RG ++  +S++       +  Y A+K  +  +T  +A
Sbjct: 120 AAYHLSVLAHPFLKASE------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 173
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLV 231
            + A   IRVN + PG+  T L+ M        E +   + R   A +R+G P E A +V
Sbjct: 174 FEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC--ALRRMGEPKELAAMV 231
Query: 232 QSII--TNPLINGEVIRIDGAL 251
             +       + G++I +DG L
Sbjct: 232 AFLCFPAASYVTGQIIYVDGGL 253

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESVAKELGPDVKFAPVDVT 60
           LK  + ++TGGA+G+G+A             + DL P  E E+  + LG  V     DV+
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 64
Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
              DV+        +FG+ D+ VN AGI   + +  +++ T    + +K+   +N    F
Sbjct: 65  QPGDVEAFGKQVISTFGRCDILVNNAGI---YPLIPFDELT---FEQWKKTFEINVDSGF 118
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
            +A+     +  N        G IIN  S   +        Y ++K+  +G T  +A DL
Sbjct: 119 LMAKAFVPGMKRNGW------GRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDL 172
Query: 181 AGAGIRVNTIAPGLFDTPL-----LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
              GI VN IAP L  T       LS + + + N L ++IP   RL  P +       + 
Sbjct: 173 GKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML-QAIP---RLQVPLDLTGAAAFLA 228
Query: 236 TN--PLINGEVIRIDGAL 251
           ++    I G+ + +DG +
Sbjct: 229 SDDASFITGQTLAVDGGM 246

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 22/258 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESVA--KELGPDVKFAPVD 58
           L G   LVTG + GLG+A             +    P+   ++V   + +G D +    D
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD 83
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNTV 117
           VTSE ++ +A     +    +D+ VN AGI        + K  +     D++R++  N  
Sbjct: 84  VTSESEIIEAFARLDEQGIDVDILVNNAGI-------QFRKPMIELETADWQRVIDTNLT 136
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             F + R +A+ +           G I+N  S+ +   ++    Y+ +K GI  +T  MA
Sbjct: 137 SAFMIGREAAKRMIPRGY------GKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMA 190
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEF--AQLVQS 233
            + A  GI+ N I PG   T +   L  N +   ++    PA +R G P E     +  S
Sbjct: 191 AEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA-KRWGKPQELVGTAVFLS 249
Query: 234 IITNPLINGEVIRIDGAL 251
              +  +NG++I +DG +
Sbjct: 250 ASASDYVNGQIIYVDGGM 267

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 20/255 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL-GPDVKFAPV--D 58
           L G   L+TG ++G+GK              +    +   + VA E+ G   K  P+  D
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT  + V+  +       G +D+ V  AGI     + +        L++F+RI   N  G
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDM------PLEEFQRIQDTNVTG 143
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA--YSASKSGIVGMTLPM 176
            F  A+ +A+      + + GL G II TAS++ +     Q    Y  SK+ +V +T  M
Sbjct: 144 VFLTAQAAAR-----AMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAM 198
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           A +LA   IRVN+++PG   T L+  L +         IP   R+G P+E   L   + +
Sbjct: 199 AVELAPHQIRVNSVSPGYIRTELVEPLAD-YHALWEPKIPL-GRMGRPEELTGLYLYLAS 256
Query: 237 --NPLINGEVIRIDG 249
             +  + G  I IDG
Sbjct: 257 AASSYMTGSDIVIDG 271

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 34/266 (12%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG---PDVKFAPV 57
           +L+G V +VTGGA+G+GKA             +        +S A EL    P  K A V
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 58  -----DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG---ISCAFKIFNYNKGTVHSLDDFK 109
                ++ +EE+V   V    D+FGK++  VN  G   +S A  I         S   + 
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHI---------SSKGWH 125
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
            +L  N  GTF + +     ++ + + E G  G I+N   +    G    V   A+++G+
Sbjct: 126 AVLETNLTGTFYMCKA----VYSSWMKEHG--GSIVNII-VPTKAGFPLAVHSGAARAGV 178
Query: 170 VGMTLPMARDLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARS---IPAPQRLGHPD 225
             +T  +A + A +GIR+N +APG ++    +       ++F   S   IPA +R+G P+
Sbjct: 179 YNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPE 237
Query: 226 EFAQLVQSIIT--NPLINGEVIRIDG 249
           E + +V  +++     I G+ + +DG
Sbjct: 238 EVSSVVCFLLSPAASFITGQSVDVDG 263

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG  SG+G               +C        +  KEL   G +      DV S 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
            +++  V    + +G +DV VN AG            G    L D  +  ++  N  G F
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG--------RLGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R++ Q++    + E G  G I+N AS    +G      YSASK G+VG T  +  +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
           A  GI VN + PG  +TP+ + + E   +    S       I A   +G    P E A++
Sbjct: 196 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
           V  +I
Sbjct: 256 VAYLI 260

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG  SG+G               +C        +  KEL   G +      DV S 
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
            +++  V    + +G +DV VN AG            G    L D  +  ++  N  G F
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAG--------RLGGGATAELADELWLDVVETNLTGVF 135
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R++ Q++    + E G  G I+N AS    +G      YSASK G+VG T  +  +L
Sbjct: 136 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 191
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
           A  GI VN + PG  +TP+ + + E   +    S       I A   +G    P E A++
Sbjct: 192 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 251
Query: 231 VQSII 235
           V  +I
Sbjct: 252 VAYLI 256

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG  SG+G               +C        +  KEL   G +      DV S 
Sbjct: 8   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 67
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
            +++  V    + +G +DV VN AG            G    L D  +  ++  N  G F
Sbjct: 68  PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 119
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R++ Q++    + E G  G I+N AS    +G      YSASK G+VG T  +  +L
Sbjct: 120 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 175
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
           A  GI VN + PG  +TP+ + + E   +    S       I A   +G    P E A++
Sbjct: 176 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 235
Query: 231 VQSII 235
           V  +I
Sbjct: 236 VAYLI 240

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 49  GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD- 107
           G  +++ P D+T+E++  +AV       G+L   V+CAG S        N G +  +D  
Sbjct: 62  GGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGS-------ENIGPITQVDSE 114
Query: 108 -FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
            ++R + +N  GT  V      L H  +    G  G  +  +SIAA        AY  +K
Sbjct: 115 AWRRTVDLNVNGTMYV------LKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTK 168
Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSIPAPQRLGHP 224
           S +  +    A +L  + +RVN+I PGL  T L++ + E  ++ +  A   P P R G  
Sbjct: 169 SAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLP-RQGEV 227
Query: 225 DEFAQLVQSIITN--PLINGEVIRIDG 249
           ++ A +   ++++    + G+VI +DG
Sbjct: 228 EDVANMAMFLLSDAASFVTGQVINVDG 254

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 13/252 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG A G+GKA             + D+     ++ A  +G   +    D++ 
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISD 63
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
              V+      +   G +D+ VN A I       + +      LD +++I+ VN  GTF 
Sbjct: 64  PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVD------LDHWRKIIDVNLTGTFI 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V R        +++   G  G +I+ AS   + G     AY A+K G++G T  +A +L 
Sbjct: 118 VTRAG-----TDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG 172
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--L 239
              I  N + PGL ++  +              + A +  G P+  A +V  + ++    
Sbjct: 173 KYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARW 232
Query: 240 INGEVIRIDGAL 251
           I G+ + +D  +
Sbjct: 233 ITGQTLNVDAGM 244

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG  SG+G               +C        +  KEL   G +      DV S 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
            +++  V    + +G +DV VN AG            G    L D  +  ++  N  G F
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R++ Q++    + E G  G I+N AS    +G      YSASK G+VG T  +  +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
           A  GI VN + PG  +TP+ + + E   +    S       I A   +G    P E A++
Sbjct: 196 ARTGITVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
           V  +I
Sbjct: 256 VAYLI 260

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG  SG+G               +C        +  KEL   G +      DV S 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
            +++  V    + +G +DV VN AG            G    L D  +  ++  N  G F
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R++ Q++    + E G  G I+N AS    +G      YSASK G+VG T  +  +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
           A  GI VN + PG  +TP+ + + E   +    S       I A   +G    P E A++
Sbjct: 196 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
           V  +I
Sbjct: 256 VAYLI 260

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG  SG+G               +C        +  KEL   G +      DV S 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
            +++  V    + +G +DV VN AG            G    L D  +  ++  N  G F
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R++ Q++    + E G  G I+N AS    +G      YSASK G+VG T  +  +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
           A  GI VN + PG  +TP+ + + E   +    S       I A   +G    P E A++
Sbjct: 196 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
           V  +I
Sbjct: 256 VAYLI 260

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG  SG+G               +C        +  KEL   G +      DV S 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
            +++  V    + +G +DV VN AG            G    L D  +  ++  N  G F
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R++ Q++    + E G  G I+N AS    +G      YSASK G+VG T  +  +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
           A  GI VN + PG  +TP+ + + E   +    S       I A   +G    P E A++
Sbjct: 196 ARTGITVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
           V  +I
Sbjct: 256 VAYLI 260

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 36/260 (13%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           V +VTGG+SG+G A                L      +V+           +DVT+EE+V
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF-------KIDVTNEEEV 68
Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
           ++AV      +G++D+ VN AGI        Y+   +   + ++RI+ VN  G++ +A+ 
Sbjct: 69  KEAVEKTTKKYGRIDILVNNAGIE------QYSPLHLTPTEIWRRIIDVNVNGSYLMAKY 122
Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
           +  ++           G IIN AS+ +Y       AY  SK  ++G+T  +A D A   I
Sbjct: 123 TIPVMLAIG------HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA-PKI 175
Query: 186 RVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
           R N + PG   TP++            + +  K+  +  R  P   R+G P+E A++V  
Sbjct: 176 RCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEW-GRQHPM-GRIGRPEEVAEVVAF 233
Query: 234 IITN--PLINGEVIRIDGAL 251
           + ++    I G  + +DG L
Sbjct: 234 LASDRSSFITGACLTVDGGL 253

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 22/251 (8%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG-----ESVAKELGPDVKFAPVDVT 60
           V LVTG + G+G               +    TS+      E+  KE G   +   ++++
Sbjct: 7   VALVTGASRGIG--FEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNIS 64
Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
             E +Q      K     +D+ VN AGI+        N     S D+++ ++  N    F
Sbjct: 65  DIESIQNFFAEIKAENLAIDILVNNAGIT------RDNLXXRXSEDEWQSVINTNLSSIF 118
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
             ++   +   + +       G II+  S+    G  GQ  Y A+K+G++G +  +A ++
Sbjct: 119 RXSKECVRGXXKKRW------GRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEV 172
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--P 238
           A   I VN +APG   T     L ++ ++F+A  IP+ Q +G P + A  V  + +    
Sbjct: 173 ASRNITVNVVAPGFIATDXTDKLTDEQKSFIATKIPSGQ-IGEPKDIAAAVAFLASEEAK 231
Query: 239 LINGEVIRIDG 249
            I G+ + ++G
Sbjct: 232 YITGQTLHVNG 242

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG  SG+G               +C        +  KEL   G +      DV S 
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
            +++  V    + +G +DV VN AG            G    L D  +  ++  N  G F
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 135
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              R++ Q++    + E G  G I+N AS    +G      YSASK G+VG T  +  +L
Sbjct: 136 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 191
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
           A  GI VN + PG  +TP+ + + E   +    S       I A   +G    P E A++
Sbjct: 192 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 251
Query: 231 VQSII 235
           V  +I
Sbjct: 252 VAYLI 256

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL--PTSEGESVAKELGPDVKFAPVDV 59
           LKG   LVTG  SG+G               L     P      +A+  G      P D+
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARH-GVKAVHHPADL 60
Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           +    ++    L +  FG +D+ VN AGI     +  +       L+ + +I+ +N    
Sbjct: 61  SDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQF------PLESWDKIIALNLSAV 114
Query: 120 FNVARLSAQLIHENKLNEDGLR----GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
           F          H  +L   G+R    G IIN AS+    G +G+ AY A+K G+VG+T  
Sbjct: 115 F----------HGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKV 164
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL 200
           +  + A + +  N I PG   TPL+
Sbjct: 165 VGLETATSNVTCNAICPGWVLTPLV 189

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 30/252 (11%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +G + LVTG + G+G+A                   +  ++++  LG + K   ++VT 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
              ++  +   +  FG++D+ VN AGI+    +           +++  I+  N    F 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKD------EEWNDIIETNLSSVFR 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +       G II            GQ  Y+A+K+G++G +  +AR++A
Sbjct: 117 LSKAVMRAMMKKR------HGRIITIG---------GQANYAAAKAGLIGFSKSLAREVA 161
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
             GI VN +APG  +T      +++    LA+ +PA  RLG   E A  V  + ++    
Sbjct: 162 SRGITVNVVAPGFIETS-----DDQRAGILAQ-VPAG-RLGGAQEIANAVAFLASDEAAY 214
Query: 240 INGEVIRIDGAL 251
           I GE + ++G +
Sbjct: 215 ITGETLHVNGGM 226

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 14/254 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG A G+GKA             + D+     ++ A  +G   +    D++ 
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISD 63
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
              V+      +   G +D+ VN A I       + +      LD +++I+ VN  GTF 
Sbjct: 64  PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVD------LDHWRKIIDVNLTGTFI 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V R        ++    G  G +I+ AS   + G     AY A+K G++G T  +A +L 
Sbjct: 118 VTRAG-----TDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELG 172
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--L 239
              I  N + PGL ++  +              + A +  G P+  A +V  + ++    
Sbjct: 173 KYNITANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGKGQPEHIADVVSFLASDDARW 232
Query: 240 INGEVIRID-GALR 252
           I G+ + +D G +R
Sbjct: 233 ITGQTLNVDAGXVR 246

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G   L+TG A G+G+A             + D+        A E+GP       DVT 
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDVTR 65
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           ++ +  A+    +  G LD+ VN A +     I    +      + ++++  +N  GT  
Sbjct: 66  QDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITR------ESYEKLFAINVAGT-- 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
              L        +    G  G IIN AS A   G++    Y A+K+ ++ +T     DL 
Sbjct: 118 ---LFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLI 174
Query: 182 GAGIRVNTIAPGLFD 196
              I VN IAPG+ D
Sbjct: 175 KHRINVNAIAPGVVD 189

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-------PTSEG---ESVAKELGP 50
           ++ G V +VTG   G+G+A             + D+       P S G   +SV  E+  
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83
Query: 51  DVKFAPVDVTSEEDVQKAVLLCK---DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD 107
               A  D ++  D  +A  L +   ++FG LDV VN AGI     I N ++      ++
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSE------EE 137
Query: 108 FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKS 167
           F  ++ V+  G F   R +A            + G IINT+S A  +G  GQ  YSA+K+
Sbjct: 138 FDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKA 197
Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPG----LFDTPLLSMLNEKVRNFLA 212
           GI  +TL  A ++   G+ VN IAP     + +T    M+  + ++F A
Sbjct: 198 GIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDA 246

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG V L+TG + G+G+AT            L        +++A EL   +   P DV  
Sbjct: 4   MKGAV-LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPL-PGDVRE 61
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E D  +AV   +++FG+L   VN AG+     +         +L++++ +L  N  G F 
Sbjct: 62  EGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHEL------TLEEWRLVLDTNLTGAFL 115
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             R +   +    L   G  G I+N  S+A      G  AY+ASK G++G+      DL 
Sbjct: 116 GIRHAVPAL----LRRGG--GTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLR 169
Query: 182 GAGIRVNTIAPGLFDT 197
            A +RV  + PG  DT
Sbjct: 170 EANVRVVNVLPGSVDT 185

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVK--FAPVDVT 60
           V +VTGGA G+G+              + DLP  E    E++      D K  F  +DVT
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63
Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
            + +   A+    +  G  DV VN AGI+    +    +      +D K+I  VN    F
Sbjct: 64  DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTE------EDLKQIYSVNVFSVF 117
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              + +++     K +E G++G IIN ASIAA +G     AYS +K  + G+T   A++L
Sbjct: 118 FGIQAASR-----KFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQEL 172
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKV---------RNFLARSIP-APQRLGHPDEFAQL 230
           A  G  VN  APG+  T +   ++ ++          NF   S   A  R   P++ A L
Sbjct: 173 APKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGL 232
Query: 231 VQSIIT--NPLINGEVIRIDGAL 251
           V  + +  +  + G+V+ +DG +
Sbjct: 233 VSFLASENSNYVTGQVMLVDGGM 255

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
           G II  +S++   G  GQV YSA+K+GI+G T  +A +LA   I VN IAPGL DT ++ 
Sbjct: 157 GRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIE 216
Query: 202 MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGAL 251
           M    ++   A S+   +R+G  +E A L   ++++    +  +VI I+G +
Sbjct: 217 MEESALKE--AMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM 266

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESV----AKELGPDVKFA 55
           MLKG V +VTG  SG+G               L      +E E V    A + G  V + 
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D++  E V+  V       G++D+ VN AGI     I ++        + +  IL +N
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF------PTEKWDAILALN 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F+    +A L H   + + G  G IIN AS       + + AY A+K G+VG T  
Sbjct: 115 LSAVFH--GTAAALPH---MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKV 168
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL----LSMLNEK--------VRNFLARSIPA-----P 218
            A + AG GI  N I PG   TPL    +S L EK         R  L+   P+     P
Sbjct: 169 TALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228
Query: 219 QRLG 222
           ++LG
Sbjct: 229 EQLG 232

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGES-----VAKELGPDVKFAP 56
           LK    LVTGG SG+G+A             +  LP  E ++     + +E G      P
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAF-KIFNYNKGTVHSLDDFKRILLVN 115
            D++ E   +  V   +++ G LD+    AG   A  +I +         + F++   VN
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTS------EQFQQTFAVN 160
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F + + +  L+ +           II T+SI AY+     + Y+A+K+ I+  +  
Sbjct: 161 VFALFWITQEAIPLLPKG--------ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRG 212
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL---SMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           +A+ +A  GIRVN +APG   T L        +K+  F  +  P  +R G P E A
Sbjct: 213 LAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQF-GQQTPM-KRAGQPAELA 266

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESV----AKELGPDVKFA 55
           MLKG V +VTG  SG+G               L      +E E V    A + G  V + 
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D++  E V+  V       G++D+ VN AGI     I ++        + +  IL +N
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF------PTEKWDAILALN 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F+    +A L H   + + G  G IIN AS       + + AY A+K G+VG T  
Sbjct: 115 LSAVFH--GTAAALPH---MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKV 168
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL----LSMLNEK--------VRNFLARSIPA-----P 218
            A + AG GI  N I PG   +PL    +S L EK         R  L+   P+     P
Sbjct: 169 TALETAGQGITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228
Query: 219 QRLG 222
           ++LG
Sbjct: 229 EQLG 232

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA----KELGPDVKFAPVDVTSEE 63
           L+TGG+ G+G A+            +     S          +E G        DV  E 
Sbjct: 29  LITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVAKER 88
Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
           +V           G+L   VN AG+     +    +    +L+  +R   +N  G+F  A
Sbjct: 89  EVLAXFETVDAQLGRLSALVNNAGV-----VDQTTRVDGITLERLQRXFEINVFGSFLCA 143
Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMTLPMARDLAG 182
           R   + +        G  G I+N +S AA  G  GQ V Y+A+K  I   TL +A+++A 
Sbjct: 144 R---EAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVAT 200
Query: 183 AGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
            GIRVN + PG+ +T + +   L  + R+ +A  +P  QR G   E A+ +
Sbjct: 201 EGIRVNAVRPGIIETDIHASGGLPNRARD-VAPQVPX-QRAGTAREVAEAI 249

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 22/254 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL--PTSEGESVAKELGPDVKFAPVDV 59
           L G V +VTG A G+G                 D+     + + VA ++G       +DV
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTA--LTLDV 268
Query: 60  TSEEDVQK-AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           T+++ V K    + +   GK+D+ VN AGI+    + N          D KR   V  V 
Sbjct: 269 TADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANM---------DEKRWDAVIAVN 319
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
                RL+  L+    + E G    +I  +S+A   G  GQ  Y+ +K+G++G+   +A 
Sbjct: 320 LLAPQRLTEGLVGNGTIGEGGR---VIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAP 376
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
            LA  GI +N +APG  +T +   +    R  + R + +  + G P + A+L+ +   +P
Sbjct: 377 VLADKGITINAVAPGFIETKMTEAIPLATRE-VGRRLNSLFQGGQPVDVAELI-AYFASP 434
Query: 239 LIN---GEVIRIDG 249
             N   G  IR+ G
Sbjct: 435 ASNAVTGNTIRVCG 448

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 107/255 (41%), Gaps = 20/255 (7%)
Query: 3   KGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
           +G   +V GG  G G AT            L     S    + +E GP V     D+   
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 66
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
            ++         + G +D+    AG+S   ++  +++ +  S D   R   VNT G F  
Sbjct: 67  NEIAVLGAAAGQTLGAIDLLHINAGVS---ELEPFDQVSEASYD---RQFAVNTKGAFFT 120
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            +    LI E         G I+ T+S+A   G  G   YSASK+ +V     +A +L  
Sbjct: 121 VQRLTPLIREG--------GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLP 172
Query: 183 AGIRVNTIAPGLFDTPL--LSMLNEKVR---NFLARSIPAPQRLGHPDEFAQLVQSI-IT 236
            GIRVN+++PG  DTP   ++ + E  R     L  +I   +R G  DE A+ V  +   
Sbjct: 173 RGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE 232
Query: 237 NPLINGEVIRIDGAL 251
                G  + +DG L
Sbjct: 233 ATFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 107/255 (41%), Gaps = 20/255 (7%)
Query: 3   KGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
           +G   +V GG  G G AT            L     S    + +E GP V     D+   
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 65
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
            ++         + G +D+    AG+S   ++  +++ +  S D   R   VNT G F  
Sbjct: 66  NEIAVLGAAAGQTLGAIDLLHINAGVS---ELEPFDQVSEASYD---RQFAVNTKGAFFT 119
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            +    LI E         G I+ T+S+A   G  G   YSASK+ +V     +A +L  
Sbjct: 120 VQRLTPLIREG--------GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLP 171
Query: 183 AGIRVNTIAPGLFDTPL--LSMLNEKVR---NFLARSIPAPQRLGHPDEFAQLVQSI-IT 236
            GIRVN+++PG  DTP   ++ + E  R     L  +I   +R G  DE A+ V  +   
Sbjct: 172 RGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE 231
Query: 237 NPLINGEVIRIDGAL 251
                G  + +DG L
Sbjct: 232 ATFTTGAKLAVDGGL 246

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 2   LKGVVGLVTGGASGLGK--ATXXXXXXXXXXXXLCDLPTSEGESVA--KELGPDVKFAPV 57
           L+G V LVTG   G+G+  A               +   S  E VA  K+ G D      
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           +V   ED+ +        FGKLD+  + +G+      F + K    + ++F R+  +NT 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS----FGHVKDV--TPEEFDRVFTINTR 140
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV----AYSASKSGIVGMT 173
           G F VAR + + +         + G +I   SI    GQ+  V     YS SK  I    
Sbjct: 141 GQFFVAREAYKHLE--------IGGRLILMGSIT---GQAKAVPKHAVYSGSKGAIETFA 189
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRL 221
             MA D+A   I VN +APG   T +             ++ NE+V  + A      +R+
Sbjct: 190 RCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV 249
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRM 253
           G P + A++V  + +N    + G+VI IDG   M
Sbjct: 250 GLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 103/244 (42%), Gaps = 34/244 (13%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESV----AKELGPDVKFA 55
           MLKG V +VTG  SG+G               L      +E E V    A + G  V + 
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D++  E V+  V       G++D+ VN AGI     I ++        + +  IL +N
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF------PTEKWDAILALN 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F+    +A L H   + + G  G IIN AS       + + AY A+K G+VG T  
Sbjct: 115 LSAVFH--GTAAALPH---MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKV 168
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL----LSMLNEK--------VRNFLARSIPA-----P 218
            A + AG GI  N I PG    PL    +S L EK         R  L+   P+     P
Sbjct: 169 TALETAGQGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228
Query: 219 QRLG 222
           ++LG
Sbjct: 229 EQLG 232

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 2   LKGVVGLVTGGASGLGK--ATXXXXXXXXXXXXLCDLPTSEGESVA--KELGPDVKFAPV 57
           L+G V LVTG   G+G+  A               +   S  E VA  K+ G D      
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           +V   ED+ +        FGKLD+  + +G+      F + K    + ++F R+  +NT 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS----FGHVKDV--TPEEFDRVFTINTR 140
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV----AYSASKSGIVGMT 173
           G F VAR + + +         + G +I   SI    GQ+  V     YS SK  I    
Sbjct: 141 GQFFVAREAYKHLE--------IGGRLILMGSIT---GQAKAVPKHAVYSGSKGAIETFA 189
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRL 221
             MA D+A   I VN +APG   T +             ++ NE+V  + A      +R+
Sbjct: 190 RCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV 249
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRM 253
           G P + A++V  + +N    + G+VI IDG   M
Sbjct: 250 GLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 19/255 (7%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDV----KFAPVDVTSEE 63
           L+T G  GLGK              +     +      KE   DV    +F   DVT +E
Sbjct: 11  LITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKE 70
Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
           D+ K V      FGK+D  +N AG      +F   K   +  D++  ++  N    F++ 
Sbjct: 71  DLHKIVEEAMSHFGKIDFLINNAGPY----VFERKKLVDYEEDEWNEMIQGNLTAVFHLL 126
Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYE--GQSGQVAYSASKSGIVGMTLPMARDLA 181
           +L   ++ +         G IIN     A    G   + A++A+K G+V +T  +A + A
Sbjct: 127 KLVVPVMRKQNF------GRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEA 180
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
             GI  N + PG     +     ++ R     + P   R G  ++ A+ +  +  +   +
Sbjct: 181 EYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIG-RSGTGEDIARTISFLCEDDSDM 239
Query: 240 INGEVIRIDGALRMI 254
           I G +I + GA+ +I
Sbjct: 240 ITGTIIEVTGAVDVI 254

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 102/250 (40%), Gaps = 22/250 (8%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGP----DVKFAPVDVTSEE 63
           LVTGG  G+G+              +      E  SV  ELG     +V    +DV+   
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG 104
Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT-FNV 122
               A     D+FG LDV    AGI      F   +    + +    +L VN  GT + V
Sbjct: 105 SCADAARTVVDAFGALDVVCANAGI------FPEARLDTMTPEQLSEVLDVNVKGTVYTV 158
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPMARDLA 181
               A L           RG +I T+SI     G  G   Y ASK+  +G     A +LA
Sbjct: 159 QACLAPLTASG-------RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELA 211
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--L 239
             G+ VN I PG   T  L  + E+  + +ARSIP    LG P +   L   + T+    
Sbjct: 212 PRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPM-GMLGSPVDIGHLAAFLATDEAGY 270
Query: 240 INGEVIRIDG 249
           I G+ I +DG
Sbjct: 271 ITGQAIVVDG 280

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 47/266 (17%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXX---XXXLCD------LPTSEGESVA------K 46
           L G V  +TG A G G+A                LCD       P +  E +A      +
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 47  ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
           ++G  +     DV   E +  A+    D  G+LD+ V  AGI+        + G     D
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP------MSAGD----D 120
Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG----QSGQVAY 162
            +  ++ VN  G ++  +++        L + G  G I+  +S A   G      G V Y
Sbjct: 121 GWHDVIDVNLTGVYHTIKVAIP-----TLVKQGTGGSIVLISSSAGLAGVGSADPGSVGY 175
Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA---PQ 219
            A+K G+VG+    A  LAG  IRVN+I P   +TP+++  NE  R +LA+   A   P 
Sbjct: 176 VAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN--NEFTREWLAKMAAATDTPG 233
Query: 220 RLGH--------PDEFAQLVQSIITN 237
            +G+        P++ A  V  ++++
Sbjct: 234 AMGNAMPVEVLAPEDVANAVAWLVSD 259

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 26/257 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   +VTG  SG+G+A             L    T   + VA E+      A   V  
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHV-LAWGRTDGVKEVADEIADGGGSAEAVVAD 87
Query: 62  EEDVQKAVLLCKD--SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
             D++ A  + ++  +  ++DV VN AGI               SL  ++ +L VN    
Sbjct: 88  LADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEV------SLGRWREVLTVNLDAA 141
Query: 120 FNVARL--SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           + ++R   +A L H +        G I+  AS+ +++G     AY+ASK  +VG+T  +A
Sbjct: 142 WVLSRSFGTAMLAHGS--------GRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALA 193
Query: 178 RDLAGAGIRVNTIAPGLF---DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
            + AG G+ VN +APG     +T  L   +E+     AR IPA  R   P++       +
Sbjct: 194 SEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITAR-IPA-GRWATPEDMVGPAVFL 251
Query: 235 ITNP--LINGEVIRIDG 249
            ++    ++G+V+ +DG
Sbjct: 252 ASDAASYVHGQVLAVDG 268

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
           P D T   ++        D FG  D+ VN AG+    KI ++       ++ + RI+ VN
Sbjct: 82  PADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDF------PVEQWDRIIAVN 135
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
              +F+  R +     +         G IIN AS         + AY A+K GI G+T  
Sbjct: 136 LSSSFHTIRGAIPPXKKKGW------GRIINIASAHGLVASPFKSAYVAAKHGIXGLTKT 189
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL 200
           +A ++A +G+ VN+I PG   TPL+
Sbjct: 190 VALEVAESGVTVNSICPGYVLTPLV 214

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 42/258 (16%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXL-CDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQ 66
           LVTGG+ G+GKA             +  D+  S           ++KF   D+T ++D+ 
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------AENLKFIKADLTKQQDIT 60
Query: 67  KAVLLCKD-SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
             + + K+ SF  + +N   AGI     IF+ +      ++  K++L +N   +      
Sbjct: 61  NVLDIIKNVSFDGIFLN---AGILIKGSIFDID------IESIKKVLDLNVWSS------ 105
Query: 126 SAQLIHENKLNEDGLR--GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
               I+  K  E+ L+    I+   S   +  +    AY+ SK  I   T  +A DLA  
Sbjct: 106 ----IYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKY 161
Query: 184 GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ----------RLGHPDEFAQLVQS 233
            IRVNT+ PG  DT L   L +K  N +  S    Q          R+  P E A+LV  
Sbjct: 162 QIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIF 221
Query: 234 IITN--PLINGEVIRIDG 249
           ++++      G +I IDG
Sbjct: 222 LLSDKSKFXTGGLIPIDG 239

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V L+TGGASGLG+A             + D        +    G +      DV S
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRS 62
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-----FKRILLVNT 116
            +D ++A   C  +FGK+D  +  AGI      ++Y+       +D     F  I  VN 
Sbjct: 63  LQDQKRAAERCLAAFGKIDTLIPNAGI------WDYSTALADLPEDKIDAAFDDIFHVNV 116
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G  +  +     +  +       RG ++ T S A +    G   Y+A+K  +VG+   M
Sbjct: 117 KGYIHAVKACLPALVSS-------RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQM 169
Query: 177 ARDLAGAGIRVNTIAPGLFDTPL 199
           A +LA   +RVN +APG  +T L
Sbjct: 170 AFELA-PHVRVNGVAPGGMNTDL 191

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 37/266 (13%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKELGPDVKFAPVDVT 60
           L+  V +VTG + G+G+A             + DL   + GE+    +         DVT
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSK--VIDLSIHDPGEAKYDHI-------ECDVT 63
Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           + + V+ ++      +G + V VN AGI       +Y K    S+ +++RI+ VN  G +
Sbjct: 64  NPDQVKASIDHIFKEYGSISVLVNNAGIE------SYGKIESMSMGEWRRIIDVNLFGYY 117
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
             ++ +   +  ++         I+N +S+ A        AY  SK  ++G+T  +A D 
Sbjct: 118 YASKFAIPYMIRSRDPS------IVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDY 171
Query: 181 AGAGIRVNTIAPGLFDTPLLS-----------MLNEKVRNFLARSIPAPQRLGHPDEFAQ 229
           A   +R N + P   DTPL+            M  EK  +      P  QR+G P E A 
Sbjct: 172 APL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM-QRIGKPQEVAS 229
Query: 230 LVQSIITN--PLINGEVIRIDGALRM 253
            V  + +     I G  + +DG L +
Sbjct: 230 AVAFLASREASFITGTCLYVDGGLSI 255

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 42/263 (15%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESV-AKELGPDVKFAPVDVT 60
           L+G   LVTG  +GLG+A                L  +  E V A    PD     +D+ 
Sbjct: 7   LEGRKALVTGANTGLGQAIA------------VGLAAAGAEVVCAARRAPD---ETLDII 51
Query: 61  SEEDVQKAVLL--------CKDSF--GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKR 110
           +++    + LL         KDSF     D+ VN AGI               S  D+  
Sbjct: 52  AKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGI------IRRADSVEFSELDWDE 105
Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
           ++ VN    F   +  A+     +L   G  G ++N AS+ +++G     +Y+A+K G+ 
Sbjct: 106 VMDVNLKALFFTTQAFAK-----ELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVA 160
Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRN-FLARSIPAPQRLGHPDEF- 227
           G+T  +A + A  GI VN IAPG  +T     L  +  RN  +   IPA  R GH ++  
Sbjct: 161 GLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPA-GRWGHSEDIA 219
Query: 228 -AQLVQSIITNPLINGEVIRIDG 249
            A +  S      ++G ++ +DG
Sbjct: 220 GAAVFLSSAAADYVHGAILNVDG 242

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLP---------TSEGESVAKELGPDV 52
             G V LVTG  +GLG+A             + DL          +   + V +E+    
Sbjct: 28  FDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRG 87
Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
             A  +  S E+ +K V    D+FG++DV VN AGI    +  ++ +    S +D+  I 
Sbjct: 88  GKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGI---LRDRSFAR---ISDEDWDIIH 141
Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
            V+  G+F V R + + + + K       G II T+S +   G  GQ  YSA+K G++G+
Sbjct: 142 RVHLRGSFQVTRAAWEHMKKQKY------GRIIMTSSASGIYGNFGQANYSAAKLGLLGL 195
Query: 173 TLPMARDLAGAGIRVNTIAP 192
              +A +   + I  NTIAP
Sbjct: 196 ANSLAIEGRKSNIHCNTIAP 215

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 37/266 (13%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKELGPDVKFAPVDVT 60
           L+  V +VTG + G+G+A             + DL   + GE+    +         DVT
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSK--VIDLSIHDPGEAKYDHI-------ECDVT 56
Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           + + V+ ++      +G + V VN AGI       +Y K    S+ +++RI+ VN  G +
Sbjct: 57  NPDQVKASIDHIFKEYGSISVLVNNAGIE------SYGKIESMSMGEWRRIIDVNLFGYY 110
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
             ++ +   +  ++         I+N +S+ A        AY  SK  ++G+T  +A D 
Sbjct: 111 YASKFAIPYMIRSR------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDY 164
Query: 181 AGAGIRVNTIAPGLFDTPLLS-----------MLNEKVRNFLARSIPAPQRLGHPDEFAQ 229
           A   +R N + P   DTPL+            M  EK  +      P  QR+G P E A 
Sbjct: 165 APL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM-QRIGKPQEVAS 222
Query: 230 LVQSIITN--PLINGEVIRIDGALRM 253
            V  + +     I G  + +DG L +
Sbjct: 223 AVAFLASREASFITGTCLYVDGGLSI 248

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTS---EGESVAKELGPDVKFAPVD 58
           LKG + LVTG + G+G A               D+       G +  K  G +      D
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD 91
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT E+ +Q  V   +   G +D+ VN AGI     +             F++++ ++   
Sbjct: 92  VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAA------QFRQVIDIDLNA 145
Query: 119 TFNVAR-LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
            F V++ +   +I +         G IIN  S+ +  G+    AY+A+K G+  +T  +A
Sbjct: 146 PFIVSKAVIPSMIKKG-------HGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIA 198
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN--------FLARSIPAPQRLGHPDEF-- 227
            +   A I+ N I PG   TP  + L E  ++        F+    PA  R G  ++   
Sbjct: 199 SEYGEANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAA-RWGEAEDLMG 257
Query: 228 -AQLVQSIITNPLINGEVIRIDGAL 251
            A  + S  +N  +NG ++ +DG +
Sbjct: 258 PAVFLASDASN-FVNGHILYVDGGI 281

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLP---------TSEGESVAKELGPDV 52
             G V LVTG   GLG+A             + DL          +S  + V +E+    
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66
Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
             A  +  S E  +K V    D+FG++DV VN AGI    +  ++++ +    D  +R+ 
Sbjct: 67  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI---LRDRSFSRISDEDWDIIQRVH 123
Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
           L    G+F V R  A   H  K N     G II TAS +   G  GQ  YSA+K G++G+
Sbjct: 124 LR---GSFQVTR--AAWDHXKKQN----YGRIIXTASASGIYGNFGQANYSAAKLGLLGL 174
Query: 173 TLPMARDLAGAGIRVNTIAP 192
              +  +     I  NTIAP
Sbjct: 175 ANTLVIEGRKNNIHCNTIAP 194

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-----------PTS-----EGESVA 45
           L+G V  +TG A G G++              CD+           P S     E   + 
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 46  KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
           ++ G       +DV  +  +++ V    + FG+LDV V  AG+    +++          
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTD------ 126
Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
           + +  ++ VN  GT+   R +        + E G  G I+  +S A  +   G   YSAS
Sbjct: 127 EQWDTVIGVNLTGTWRTLRATVP-----AMIEAGNGGSIVVVSSSAGLKATPGNGHYSAS 181
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR 213
           K G+  +T  +A +L   GIRVN+I P   +TP++    E +    AR
Sbjct: 182 KHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE--PEAMMEIFAR 227

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG-----ESVAKELGPDVKFA 55
           MLKG   +VTG  SG+G A             +      E       ++  + G    + 
Sbjct: 1   MLKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYL 60
Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D++  +  +  +    ++ G LD+ VN AGI     I  +       +D +  I+ +N
Sbjct: 61  NADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEF------PVDKWNAIIALN 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F+    +  ++ +         G IIN AS         + AY A+K G+VG+T  
Sbjct: 115 LSAVFHGTAAALPIMQKQGW------GRIINIASAHGLVASVNKSAYVAAKHGVVGLTKV 168
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV------------RNFLARSIPA-----P 218
            A + AG GI  N I PG   TPL+    E +            R  LA   P+     P
Sbjct: 169 TALENAGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTP 228
Query: 219 QRLG 222
           ++LG
Sbjct: 229 EQLG 232

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G V L+TG +SG+G+AT            +      +  ++  EL   G  V    +D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNT 116
           V   + V  AV    ++ G LD+ VN AGI           G V   D  D+ R++  N 
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLL--------GPVEDADTTDWTRMIDTNL 116
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           +G   + R +   +  +K       G ++  +SIA          Y A+K G+   +  +
Sbjct: 117 LGLMYMTRAALPHLLRSK-------GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETL 169
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-VRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            +++   G+RV  I PG  DT L   +     +    + I   ++L   D  A+ V+  +
Sbjct: 170 RQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQD-IAEAVRYAV 228
Query: 236 TNP 238
           T P
Sbjct: 229 TAP 231

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 22/256 (8%)
Query: 1   MLKGVVGLVTGGA-SGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAK--ELG-PDVKFA 55
           +LKG V LVT  A +G+G  T            + D      GE+  +  +LG   V+  
Sbjct: 19  LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV 78
Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DVTS E V   +    +  G+LDV VN AG+     + +         +++ R+L V 
Sbjct: 79  VCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTD------EEWDRVLNVT 132
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
                   R  A L +   ++  G   VI+N AS+  +  Q  Q  Y+A+K+G++ +T  
Sbjct: 133 LTSVMRATR--AALRYFRGVDHGG---VIVNNASVLGWRAQHSQSHYAAAKAGVMALTRC 187
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR--SIPAPQRLGHPDEFAQLVQS 233
            A +    G+R+N ++P +     L   +      L R  S  A  R   P E A  +  
Sbjct: 188 SAIEAVEFGVRINAVSPSIARHKFLEKTSSS--ELLDRLASDEAFGRAAEPWEVAATIAF 245
Query: 234 IITN--PLINGEVIRI 247
           + ++    + GEV+ +
Sbjct: 246 LASDYSSYMTGEVVSV 261

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG--ISCAFKIFNYNKGTVHSLDDFKRILLVN 115
           DV + +D+QK +    + FG++D+ +N A     C  +          S++ +  ++ + 
Sbjct: 63  DVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAEDL--------SVNGWNSVINIV 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             GTF      +Q I +  + E G++G IIN  +  A++   G +  +A+K+G++  T  
Sbjct: 115 LNGTF----YCSQAIGKYWI-EKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKT 169
Query: 176 MARDLA-GAGIRVNTIAPGLFDTPLLS---MLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           +A +     GIRVN IAPG  +    +    ++E+      +S+P   RLG P+E A L 
Sbjct: 170 LAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEXAKRTIQSVPLG-RLGTPEEIAGLA 228
Query: 232 QSIITNP--LINGEVIRIDGALRM 253
             + ++    ING     DG   +
Sbjct: 229 YYLCSDEAAYINGTCXTXDGGQHL 252

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 20/254 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKE---LGPDVKFAPVD 58
           L G   ++TG  +G+GK              + D+       V  E   LG        D
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           +TSE+++           GK+D+ VN AG     K F+        + DF+R   +N   
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAG-GGGPKPFDM------PMADFRRAYELNVFS 121
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F++++L A  + +N        GVI+   S+AA        +Y++SK+    +   MA 
Sbjct: 122 FFHLSQLVAPEMEKNG------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAF 175
Query: 179 DLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT- 236
           DL    IRVN IAPG +    L S++  ++   + +  P  +RLG P + A     + + 
Sbjct: 176 DLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI-RRLGQPQDIANAALFLCSP 234
Query: 237 -NPLINGEVIRIDG 249
               ++G+++ + G
Sbjct: 235 AASWVSGQILTVSG 248

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 20/223 (8%)
Query: 33  LCDLPTSEGESVA---KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGIS 89
           + DL +   E+VA   ++ G        +VT E+  +  +    D FGK+ V VN AG  
Sbjct: 41  VTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAG-G 99
Query: 90  CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS 149
              K F+        + DF+    +N    F +++L+A   H  K       G I+N +S
Sbjct: 100 GGPKPFDM------PMSDFEWAFKLNLFSLFRLSQLAAP--HMQKAG----GGAILNISS 147
Query: 150 IAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT-PLLSMLNEKVR 208
           +A         +Y +SK+ +  +T  +A D+   GIRVN IAPG   T  L ++L  ++ 
Sbjct: 148 MAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIE 207
Query: 209 NFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDG 249
             + +  P   RLG   + A     + +     I+G+V+ + G
Sbjct: 208 RAMLKHTPL-GRLGEAQDIANAALFLCSPAAAWISGQVLTVSG 249

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 33/260 (12%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKEL---GPDVKFAPV 57
           L G    VTGG+ G+G A             L  +  +E  ++V  E+   G        
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D    E +++A+    ++ G LD+ VN AGI  +  +         ++ DF  +  VN  
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEET------TVADFDEVXAVNFR 142
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVII--NTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             F   R +++ +       DG R + I  N A +  + G S    YSASK+ + G+T  
Sbjct: 143 APFVAIRSASRHLG------DGGRIITIGSNLAELVPWPGIS---LYSASKAALAGLTKG 193
Query: 176 MARDLAGAGIRVNTIAPGLFDT---PLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
           +ARDL   GI VN + PG  DT   P      E  R  +A         G P + A LV 
Sbjct: 194 LARDLGPRGITVNIVHPGSTDTDXNPADGDHAEAQRERIATG-----SYGEPQDIAGLV- 247
Query: 233 SIITNP---LINGEVIRIDG 249
           + +  P    + G  + IDG
Sbjct: 248 AWLAGPQGKFVTGASLTIDG 267

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 27/216 (12%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCD----LPT------------SEGESVA 45
           L+G V  +TG A G G+A               D    LP+            SE   + 
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 46  KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
           +     +  A VD    + ++K V     + G+LD+ V  AG++      +         
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITP------ 122
Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
           +DF+ ++ +N  GT+N     A      ++ E G  G II  +S A  + Q   + Y+AS
Sbjct: 123 EDFRDVMDINVTGTWNTVMAGAP-----RIIEGGRGGSIILISSAAGMKMQPFMIHYTAS 177
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
           K  + G+    A +L    IRVN++ PG  +TP+ S
Sbjct: 178 KHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGS 213

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 20/257 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC---DLPTSEGESVAKELGPDVKFAPVD 58
           LK    LVTGG  G+G A              C   +   +E  S  ++ G  V  +  D
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71
Query: 59  VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
            +   + +K +      FG KLD+ +N  G   +    +Y      + +DF   +  N  
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDY------TAEDFSFHISTNLE 125
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             +++++L+  L+  +        G II  +SIA     S    YSA+K  +  +   +A
Sbjct: 126 SAYHLSQLAHPLLKASGC------GNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
            + A  GIR N +AP +  TPL   + +     +  S     R G P+E + LV + +  
Sbjct: 180 CEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLV-AFLCM 238
Query: 238 P---LINGEVIRIDGAL 251
           P    I G+ I +DG L
Sbjct: 239 PAASYITGQTICVDGGL 255

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 22/243 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G V L+TG +SG+G+AT            +      +  ++  EL   G  V    +D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNT 116
           V   + V  AV    ++ G LD+ VN AGI           G V   D  D+ R +  N 
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIXLL--------GPVEDADTTDWTRXIDTNL 116
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           +G     R +   +  +K       G ++  +SIA          Y A+K G+   +  +
Sbjct: 117 LGLXYXTRAALPHLLRSK-------GTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETL 169
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-VRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            +++   G+RV  I PG  DT L   +     +    + I   ++L   D  A+ V+  +
Sbjct: 170 RQEVTERGVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIRKLQAQD-IAEAVRYAV 228
Query: 236 TNP 238
           T P
Sbjct: 229 TAP 231

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           LKG   L+TGGASGLG+A             + D        +  + G +V     DV S
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRS 62
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV----HSLD-DFKRILLVNT 116
            ED ++A   C   FGK+D  +  AG      I++Y+   V     SLD  F  +  +N 
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAG------IWDYSTALVDLPEESLDAAFDEVFHINV 116
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G  +  +     +  +       RG +I T S A +    G   Y+A+K  IVG+   +
Sbjct: 117 KGYIHAVKACLPALVAS-------RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVREL 169
Query: 177 ARDLAGAGIRVNTIAPGLFDTPL 199
           A +LA   +RVN +  G  ++ L
Sbjct: 170 AFELA-PYVRVNGVGSGGINSDL 191

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 48/243 (19%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFA------PVDVTS 61
            VTG   G+G AT                     E+ AK  G D  F         +V  
Sbjct: 11  WVTGAGKGIGYATALAFV----------------EAGAKVTGFDQAFTQEQYPFATEVMD 54
Query: 62  EEDVQKAVLLCKDSFG---KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
             D  +   +C+       +LD  VN AGI               S +D+++   VN  G
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGI------LRMGATDQLSKEDWQQTFAVNVGG 108
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            FN+ + +       +       G I+  AS AA+  + G  AY ASK+ +  + L +  
Sbjct: 109 AFNLFQQTMNQFRRQR------GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL 162
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML-------NEKVRNF---LARSIPAPQRLGHPDEFA 228
           +LAG+G+R N ++PG  DT +   L        +++R F       IP   ++  P E A
Sbjct: 163 ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLG-KIARPQEIA 221
Query: 229 QLV 231
             +
Sbjct: 222 NTI 224

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 86/215 (40%), Gaps = 36/215 (16%)
Query: 50  PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK 109
           P   + PV++  +   + AV     +FG+LD  VN AG++    +       V SL+  +
Sbjct: 55  PRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLE--R 112
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
            ++    +  + V  L A             RG I+N +S  A  GQ     Y ASK   
Sbjct: 113 NLIHYYAMAHYCVPHLKAT------------RGAIVNISSKTAVTGQGNTSGYCASKGAQ 160
Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR-------------SIP 216
           + +T   A  L   G+RVN + P    TPL        RN++A               +P
Sbjct: 161 LALTREWAVALREHGVRVNAVIPAEVMTPLY-------RNWIATFEDPEAKLAEIAAKVP 213
Query: 217 APQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDG 249
             +R   PDE A     +++       GE + +DG
Sbjct: 214 LGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDG 248

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 25/248 (10%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTGG+ G+G+A             +    +   E  A+ LG      P+    E+D  K
Sbjct: 6   LVTGGSRGIGRAIAEALVARGYRVAIA---SRNPEEAAQSLGA----VPLPTDLEKDDPK 58
Query: 68  AVL-LCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNTVGTFNVARL 125
            ++    ++ G L V V+ A +       N  K  +  S ++++R+L ++     +VA L
Sbjct: 59  GLVKRALEALGGLHVLVHAAAV-------NVRKPALELSYEEWRRVLYLH----LDVAFL 107
Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
            AQ    +       R + I + +     G     AY+ +K+ ++G+T  +A++ A  GI
Sbjct: 108 LAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167
Query: 186 RVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLIN 241
           RVN + PG  +T     L  N ++   +   IP   R   P+E A++   +  +    + 
Sbjct: 168 RVNLLCPGYVETEFTLPLRQNPELYEPITARIPM-GRWARPEEIARVAAVLCGDEAEYLT 226
Query: 242 GEVIRIDG 249
           G+ + +DG
Sbjct: 227 GQAVAVDG 234

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 21/255 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G    VTG  SG+G               L D   +  +  A+ELG  V    V   +
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVT 68
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           + +   A     ++   + + VN AGI+        +  T      +++++ VN  G F 
Sbjct: 69  DAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDAT------WRQVMAVNVDGMFW 122
Query: 122 VARLSAQLIHENK----LNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
            +R   + +        +N   + G I+N    A+        +Y ASK  +  +T  +A
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFAS--------SYMASKGAVHQLTRALA 174
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ-RLGHPDEF--AQLVQSI 234
            + AG G+RVN +APG   T +   + E+   F       P  R G P E   A L  + 
Sbjct: 175 AEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLAS 234
Query: 235 ITNPLINGEVIRIDG 249
                + G ++ +DG
Sbjct: 235 PAASYVTGAILAVDG 249

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 29/268 (10%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL------GPDVKFAPVDV 59
           V ++TG ++G+G+AT            +        E   +++        +V     DV
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 67
Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           T++    + +      FGKLD+ VN AG   A        GT  S++ +   L +N    
Sbjct: 68  TTDAGQDEILSTTLGKFGKLDILVNNAG--AAIPDSQSKTGTAQSIESYDATLNLNLRSV 125
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPMAR 178
             + + +   +   K       G I+N +SIA+          YS +K+ I   T   A 
Sbjct: 126 IALTKKAVPHLSSTK-------GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAI 178
Query: 179 DLAGAGIRVNTIAPGLFDTPL---LSMLNEKVRNF------LARSIPAPQRLGHPDEFAQ 229
           DL   GIRVN+I+PGL  T     + M  E  + F      +   +PA   +G P + A+
Sbjct: 179 DLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG-VMGQPQDIAE 237
Query: 230 LVQSII---TNPLINGEVIRIDGALRMI 254
           ++  +    T+  I G  + +DG   +I
Sbjct: 238 VIAFLADRKTSSYIIGHQLVVDGGSSLI 265

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
             G   +VTGGASG+G AT            L D+     E     L   G D      D
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 59  VTSEEDVQKAVLLCKDSF---GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
           V     + + V L  ++F   G +DV  + AGI  A  +   N       DD++ ++ ++
Sbjct: 89  V---RHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNH------DDWRWVIDID 139
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G+ +   + A L    +L E G  G I  TAS A     +G   Y  +K G+VG+   
Sbjct: 140 LWGSIHA--VEAFL---PRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAET 194
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR 208
           +AR++   GI V+ + P + +T L+S  +E++R
Sbjct: 195 LAREVKPNGIGVSVLCPMVVETKLVSN-SERIR 226

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 13/210 (6%)
Query: 48  LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD 107
           LG  V F   D+      Q  V      FG++D  VN AGI+   +    +       ++
Sbjct: 77  LGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVR----DDFLDLKPEN 132
Query: 108 FKRILLVNTVGT--FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
           F  I+ VN  GT  F  A L A L  + + +       IIN  S++A      ++ Y  S
Sbjct: 133 FDTIVGVNLRGTVFFTQAVLKAXLASDARASRS-----IINITSVSAVXTSPERLDYCXS 187
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD 225
           K+G+   +  +A  LA  GI V  + PG+  +   + ++ K    +   +   +R G P+
Sbjct: 188 KAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDXTAAVSGKYDGLIESGLVPXRRWGEPE 247
Query: 226 EFAQLVQSIITNP--LINGEVIRIDGALRM 253
           +   +V  +         G VI+ DG L +
Sbjct: 248 DIGNIVAGLAGGQFGFATGSVIQADGGLSI 277

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 39/273 (14%)
Query: 1   MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG---PDVKFAPV 57
            LKG   LVTG  +G+GKA             +            KE+    PD    PV
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 58  --DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D+ +E+  Q  +    + + K+D+ +N  GI    + F+         +D+ ++  VN
Sbjct: 67  VADLGTEQGCQDVI----EKYPKVDILINNLGIFEPVEYFDIPD------EDWFKLFEVN 116
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
                 + R   +   E K       G +I  AS AA         YSA+K+  + ++  
Sbjct: 117 IXSGVRLTRSYLKKXIERK------EGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRS 170
Query: 176 MARDLAGAGIRVNTIAPGL-----FDTPLLSM-------LNEKVRNFLARSIPAP--QRL 221
           +A    G  + VNTI PG       +T L S+       + E  + F   + P    QRL
Sbjct: 171 LAELTTGTNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRL 230
Query: 222 GHPDEFAQLVQSIITNPL---INGEVIRIDGAL 251
             P+E A LV + +++PL   ING  +RIDG L
Sbjct: 231 IRPEEIAHLV-TFLSSPLSSAINGSALRIDGGL 262

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK------ELGPDVKFA 55
           LK  V ++ GG   LG  T            L      + ++  K      + G  V   
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68
Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D+++EE+V K     +  FGK+D+ +N  G      I   ++    ++D      + N
Sbjct: 69  QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMD-----TINN 123
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
            V  F + + +        +N +G   + I T+ +AAY G      Y+ +K+ +   T  
Sbjct: 124 KVAYFFIKQAAKH------MNPNG-HIITIATSLLAAYTGFYS--TYAGNKAPVEHYTRA 174
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            +++L    I VN IAPG  DT        K      +S     +L   ++ A +++ + 
Sbjct: 175 ASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT 234
Query: 236 TN-PLINGEVIRIDG 249
           T+   ING+ I  +G
Sbjct: 235 TDGWWINGQTIFANG 249

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 32/263 (12%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPV---- 57
           L+G + +VTG +SG+G+A             +    T+   +   EL  ++         
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVV----TARNGNALAELTDEIAGGGGEAAA 61
Query: 58  ---DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRIL 112
              DV  E   +  V L    FG LD   N AG   A        G + SL  + ++  L
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAM-------GEISSLSVEGWRETL 114
Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
             N    F  A+     I        G   +   ++ +    G +G   Y+ASK+G++G+
Sbjct: 115 DTNLTSAFLAAKYQVPAIAAL-----GGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGL 169
Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPL----LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
              +A +L   GIRVN + PG  DTP     L     + R F+   + A +R+  P+E A
Sbjct: 170 VQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFV-EGLHALKRIARPEEIA 228
Query: 229 QLVQSIITN--PLINGEVIRIDG 249
           +    + ++    + G  +  DG
Sbjct: 229 EAALYLASDGASFVTGAALLADG 251

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG--ISCAFKIFNYNKGTVHSLDDFKRILLVN 115
           DVT+E+   + +      FGK+DV VN AG  I  AF       GT   +D + + L +N
Sbjct: 66  DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFG----TTGTDQGIDIYHKTLKLN 121
Query: 116 TVGTFNVAR-LSAQLIHENKLNEDGLRGVIINTASI-AAYEGQSGQVAYSASKSGIVGMT 173
                 + + +   L+          +G I+N +SI A  + Q   + Y+ +K+ +   T
Sbjct: 122 LQAVIEMTKKVKPHLVAS--------KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYT 173
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLA---RSIPAPQRLGHP 224
              A DLA  GIRVN+++PG+ +T   + +      ++K  NF+A     IP     G P
Sbjct: 174 RSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGA-AGKP 232
Query: 225 DEFAQLVQSIITNPL---INGEVIRIDGALRMI 254
           +  A ++  +    L   I G+ I  DG   ++
Sbjct: 233 EHIANIILFLADRNLSFYILGQSIVADGGTSLV 265

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
           G ++  +SIAA+    G   Y+ SK+ ++G+T  +A +LA   IRVN +APGL  T    
Sbjct: 145 GSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSR 204
Query: 202 MLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDG 249
           ML  +K +    +     +RLG P++ A +V  + +     I GE + + G
Sbjct: 205 MLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGG 255

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 27/202 (13%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFA------PVDV 59
           + ++TG + G+G               L        E V  E+    K        P+D+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 60  TSEEDVQKAVLLCKD---SFGKLDVNVNCAGISCAFKIFNYNKGTVHS-LDDFKRILLVN 115
           T   D  KA    KD    +G +D+ VN A          +  G++   +D+F++I  +N
Sbjct: 69  T---DCTKADTEIKDIHQKYGAVDILVNAAA--------XFXDGSLSEPVDNFRKIXEIN 117
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
            +  + + +   ++    K       G I N AS AA  G +    Y ++K  ++G+   
Sbjct: 118 VIAQYGILKTVTEIXKVQK------NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAES 171
Query: 176 MARDLAGAGIRVNTIAPGLFDT 197
           + R+LA  GIRV T+ PG  +T
Sbjct: 172 LYRELAPLGIRVTTLCPGWVNT 193

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 26/263 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE----GESVAKELGPDVKFAPV 57
           L G   L+TG   G+G               L     SE      ++ ++ G DV    +
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+   +   +      ++FG LDV VN AGIS    + + +         F   + VN  
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQL------FDATIAVN-- 129
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
                  L A  + +  +   G  G II  AS AA        AY  SK+G+V  T  +A
Sbjct: 130 --LRAPALLASAVGKAMVAA-GEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLA 186
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQR--LGH---PDEFAQLVQ 232
           R+L   GIR N++ P    T +L+ + ++V    A+S P   R  LG    P E +  V 
Sbjct: 187 RELGPHGIRANSVCP----TVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVV 242
Query: 233 SIITNP--LINGEVIRIDGALRM 253
            + ++   +ING  I +DG   M
Sbjct: 243 WLASDAASMINGVDIPVDGGYTM 265

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 22/236 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             G+  LVTG   G+G+ T                  S+  S+AKE  P ++   VD+  
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGD 63
Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            +  +KA+       G +D+ VN A +          K      + F R   VN    F 
Sbjct: 64  WDATEKAL----GGIGPVDLLVNNAALVIMQPFLEVTK------EAFDRSFSVNLRSVFQ 113
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V+    Q++  + +N  G+ G I+N +S+ A+      + YS++K  +  +T  MA +L 
Sbjct: 114 VS----QMVARDMINR-GVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 168
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRN--FLARSIPAPQRLGHPDEFAQLVQSII 235
              IRVN++ P    T +L+ + +KV      AR +     L    E   +V SI+
Sbjct: 169 PHKIRVNSVNP----TVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSIL 220

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 105/269 (39%), Gaps = 35/269 (13%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-------------PTSEGESVA--- 45
           ++G V  VTG A G G++               D+             P S  E +A   
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 46  ---KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV 102
              K     +  A VDV   + ++ AV    +  G+LD+ V  AGI       +      
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKT---- 124
Query: 103 HSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY 162
            S +D+  ++ +N  G +   +  A + H   +   G  G II T+S+   +       Y
Sbjct: 125 -SEEDWTEMIDINLAGVWKTVK--AGVPH---MIAGGRGGSIILTSSVGGLKAYPHTGHY 178
Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLG 222
            A+K G+VG+      +L    IRVN++ P    TP+L   NE         +  P    
Sbjct: 179 VAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH--NEGTFKMFRPDLENPG--- 233
Query: 223 HPDEFAQLVQSIITNPLINGEVIRIDGAL 251
            PD+ A + Q   T P+   E I I  A+
Sbjct: 234 -PDDMAPICQMFHTLPIPWVEPIDISNAV 261

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 32/266 (12%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESVAKE---LGPDVKFAPV 57
           L G V LVTG   G+G A             +     T + E V  E   LG D      
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+    ++ K        FG LD+ V+ +G+      F + K    + ++F R+  +NT 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS----FGHLKDV--TEEEFDRVFSLNTR 129
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F VAR + +      L E G   +++ +++ +          YS SK  +       +
Sbjct: 130 GQFFVAREAYR-----HLTEGGR--IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFS 182
Query: 178 RDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRLGHPD 225
           +D     I VN +APG   T +             S   E+ +   A + P   R G P 
Sbjct: 183 KDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWPQ 241
Query: 226 EFAQLVQSIITN--PLINGEVIRIDG 249
           + A +V  +++     +NG+V+ +DG
Sbjct: 242 DVANVVGFLVSKEGEWVNGKVLTLDG 267

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 48  LGPDVKFAPV--DVTSEEDVQKAV--LLCKDSFGKLDVNVNCAGISCAFKIF------NY 97
           +G D++ A V  D+++ E  ++A+  +L K S G +D  V CAG+    K+       NY
Sbjct: 29  VGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKG-MDGLVLCAGLGPQTKVLGNVVSVNY 87
Query: 98  NKGTVHSLDDFKRIL---------LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA 148
             G    +D F   L         ++++V + ++A     L    +  E+     I+  A
Sbjct: 88  F-GATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHA 146
Query: 149 SIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEK 206
                  Q G +AY+ SK+ +       A     AG+R+NTIAPG  +TPLL   + + +
Sbjct: 147 G-----EQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR 201
Query: 207 VRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGAL 251
               +A+ +P   R   P E A ++  +++     ++G  I IDG +
Sbjct: 202 YGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 38/234 (16%)
Query: 36  LPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFK 93
           + T   ES  +EL   P ++   +DVT ++ + +      +   +LDV  N AG      
Sbjct: 34  IATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFA----NEVERLDVLFNVAGF----- 84
Query: 94  IFNYNKGTVHSLD----DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS 149
               + GTV   +    DF   L V ++     A L   L  ++        G IIN +S
Sbjct: 85  ---VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKS--------GNIINMSS 133
Query: 150 IAA-YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----- 203
           +A+  +G   +  YS +K+ ++G+T  +A D    GIR N + PG  DTP L        
Sbjct: 134 VASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG 193
Query: 204 -NEKVRN-FLARSIPAPQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGALRM 253
             E+ RN FL R      R    +E A L   + ++    + G  + IDG   +
Sbjct: 194 NPEEARNDFLKRQKTG--RFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL 245

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 32/266 (12%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESVAKE---LGPDVKFAPV 57
           L G V LVTG   G+G A             +     T + E V  E   LG D      
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+    ++ K        FG LD+ V+ +G+      F + K    + ++F R+  +NT 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS----FGHLKDV--TEEEFDRVFSLNTR 129
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F VAR + +      L E G   +++ +++ +          +S SK  +       +
Sbjct: 130 GQFFVAREAYR-----HLTEGGR--IVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFS 182
Query: 178 RDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRLGHPD 225
           +D     I VN +APG   T +             S   E+ +   A + P   R G P 
Sbjct: 183 KDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWPQ 241
Query: 226 EFAQLVQSIITN--PLINGEVIRIDG 249
           + A +V  +++     +NG+V+ +DG
Sbjct: 242 DVANVVGFLVSKEGEWVNGKVLTLDG 267

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 2   LKGVVGLVTGGASGLGKA---TXXXXXXXXXXXXLCD------LPTSEGESVAKE----- 47
           ++G V  +TG A G G++   T            +C       LP S  + +A+      
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 48  -LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV-NCAGISCAFKIFNYNKGTVHSL 105
            LG  +  + VDV   + +Q AV       G+LD+ + N A  S   ++   +  T    
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT---- 141
Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
             ++ ++ VN  G +  AR++   I   K       G I+ T+SI    G      Y AS
Sbjct: 142 --WRDMIDVNLNGAWITARVAIPHIMAGKRG-----GSIVFTSSIGGLRGAENIGNYIAS 194
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE 205
           K G+ G+   MA +L    IRVN + P    TP+L  LNE
Sbjct: 195 KHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML--LNE 232

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC----DLPTSEGESVAKELGPDVKFAPV 57
           + G V ++TG +SG+G A             L     D       S+ ++ G  V    V
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD---FKRILLV 114
           DV + E V   V   + SFG  D+ VN AG          N+  + + D+   F   LLV
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGS-------NETIMEAADEKWQFYWELLV 117
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLR----GVIINTASIAAYEGQSGQVAYSASKSGIV 170
                    RL+  L+        G+R    G II+ ASI A +    +  Y+ +K+ ++
Sbjct: 118 -----MAAVRLARGLV-------PGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALM 165
Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTP 198
             +  +A ++    IRVN I PGL  TP
Sbjct: 166 MFSKTLATEVIKDNIRVNCINPGLILTP 193

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 2   LKGVVGLVTG--GASGLGKATXXXXXXXXXXXXLCDLPTSEG-ESVAKEL----GPDVKF 54
           LKG V +VTG  G  G+G               +     ++G E   KEL    G   K 
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 55  APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
               V S E  +K V      FG++D  +  AG +    I +       S++ +  ++ V
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILD------GSVEAWNHVVQV 131
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--SGQVAYSASKSGIVGM 172
           +  GTF+ A+       E         G ++ TAS++ +       Q +Y+ +K+G + M
Sbjct: 132 DLNGTFHCAKAVGHHFKERGT------GSLVITASMSGHIANFPQEQTSYNVAKAGCIHM 185
Query: 173 TLPMA---RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP 216
              +A   RD A    RVN+I+PG  DT L   + ++ +      IP
Sbjct: 186 ARSLANEWRDFA----RVNSISPGYIDTGLSDFVPKETQQLWHSMIP 228

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 31/253 (12%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL---------PTSEGESVA------K 46
           + G V  ++G A G G++               D+         P S  E +A      K
Sbjct: 13  VAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVK 72
Query: 47  ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
           +L   +  A VDV   E ++ AV    +  G+LD+ V  AG+    +  +  +  V    
Sbjct: 73  DLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNV---- 128
Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
            ++ ++ +N  G ++  +  A + H   +   G  G I+ T+S+   +       Y A+K
Sbjct: 129 -WQDMIDINLTGVWHTVK--AGVPH---VLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAK 182
Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDE 226
            G++G+    A +L    IRVN + P    T ++  +N++        +  P     PD+
Sbjct: 183 HGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMV--MNDQTFRLFRPDLENPG----PDD 236
Query: 227 FAQLVQSIITNPL 239
           FA + Q + T P+
Sbjct: 237 FAPISQMMHTLPV 249

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V   ED ++ V +  +  G +D+ V+ A ++  F   N    T    D   +IL VN   
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFG--NIIDATEEVWD---KILHVNVKA 126
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
           T     ++  ++ E  + + G   V+I  +S+ AY        Y+ SK+ ++G+T  +A 
Sbjct: 127 TV---LMTKAVVPE--MEKRGGGSVLI-VSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 180
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           +LA   IRVN +APGL  T    +L  +K R    +     +RLG+P++ A +V  + + 
Sbjct: 181 ELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 240
Query: 238 --PLINGEVIRIDG 249
               I GE + + G
Sbjct: 241 DASYITGETVVVGG 254

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 24/205 (11%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC----DLPTSEGESVAKELGPDVKFAPV 57
           + G V ++TG +SG+G A             L     D       S+ ++ G  V    V
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV + E V   V   + SFG  D+ VN AG          N+  + + D+  +      +
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGS-------NETIMEAADE--KWQFYWEL 115
Query: 118 GTFNVARLSAQLIHENKLNEDGLR----GVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
                 RL+  L+        G+R    G II+ ASI A +    +  Y+ +K+ ++  +
Sbjct: 116 HVMAAVRLARGLV-------PGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFS 168
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTP 198
             +A ++    IRVN I PGL  TP
Sbjct: 169 KTLATEVIKDNIRVNCINPGLILTP 193

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 42  ESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGT 101
            S+     PD+     D++  E   + V    + FG++D  VN AG+  A       +  
Sbjct: 60  RSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEXTQ-- 117
Query: 102 VHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA 161
               +D+   L VN  G F++ + +A       L +     V I T+ +           
Sbjct: 118 ----EDYDHNLGVNVAGFFHITQRAAA----EXLKQGSGHIVSITTSLVDQPXVGXPSAL 169
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
            S +K G+  +T  +A + + +G+RVN ++PG+  TP       +  + LA   P    +
Sbjct: 170 ASLTKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKTPXHPA---ETHSTLAGLHP----V 222
Query: 222 GHPDEFAQLVQSII---TNPLINGEVIRIDG 249
           G   E   +V +++       I GE++ +DG
Sbjct: 223 GRXGEIRDVVDAVLYLEHAGFITGEILHVDG 253

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
           Y+  K  +VG+T   A +LA  GIRVN +APG+   P+   + E+ ++   R +P  +R 
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 251
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
              ++ A  V  +++     I G +I++DG L ++
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
           Y+  K  +VG+T   A +LA  GIRVN +APG+   P+   + E+ ++   R +P  +R 
Sbjct: 174 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 231
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
              ++ A  V  +++     I G +I++DG L ++
Sbjct: 232 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 266

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
           Y+  K  +VG+T   A +LA  GIRVN +APG+   P+   + E+ ++   R +P  +R 
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 251
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
              ++ A  V  +++     I G +I++DG L ++
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
           Y+  K  +VG+T   A +LA  GIRVN +APG+   P+   + E+ ++   R +P  +R 
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 251
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
              ++ A  V  +++     I G +I++DG L ++
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
           Y+  K  +VG+T   A +LA  GIRVN +APG+   P+   + E+ ++   R +P  +R 
Sbjct: 174 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 231
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
              ++ A  V  +++     I G +I++DG L ++
Sbjct: 232 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 266

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
           Y+  K  +VG+T   A +LA  GIRVN +APG+   P+   + E+ ++   R +P  +R 
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 251
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
              ++ A  V  +++     I G +I++DG L ++
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
           Y+  K  +VG+T   A +LA  GIRVN +APG+   P+   + E+ ++   R +P  +R 
Sbjct: 174 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 231
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
              ++ A  V  +++     I G +I++DG L ++
Sbjct: 232 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 266

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL--------GPDVK 53
             G    VTGGA+G+G               + D+     +S+ K L        GP+V 
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ---DSIDKALATLEAEGSGPEVM 62
Query: 54  FAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILL 113
              +DV S E  + A    +  FG + +  N AG++       +      S DD+  +L 
Sbjct: 63  GVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNL------FQPIEESSYDDWDWLLG 116
Query: 114 VNTVGTFN-VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
           VN  G  N V     +++   K  E    G ++NTAS+AA+        Y+ +K  + G+
Sbjct: 117 VNLHGVVNGVTTFVPRMVERVKAGEQK-GGHVVNTASMAAFLAAGSPGIYNTTKFAVRGL 175
Query: 173 TLPMARDLAGAGIRVNTIAPGL 194
           +  +   L    I V+ + PGL
Sbjct: 176 SESLHYSLLKYEIGVSVLCPGL 197

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 50  PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK 109
           P+   A VDVT +     A+   +  +G  D  VN AG+    +I           ++++
Sbjct: 59  PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQI------DTQEANEWQ 112
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
           R+  VN +G  N   + A L      N     G IIN +SIA  +      AY  +K  +
Sbjct: 113 RMFDVNVLGLLN--GMQAVLAPMKARN----CGTIINISSIAGKKTFPDHAAYCGTKFAV 166
Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
             ++  +  ++A + +RV TIAP    T LLS
Sbjct: 167 HAISENVREEVAASNVRVMTIAPSAVKTELLS 198

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           + +VTG  SG+G+A             L        +  A E+G D    P DVT  + V
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSV 89
Query: 66  QKAVLLCKDSFGKLDVNVNCAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
           +       + FG++DV  N AG    A    +       +   +K+++  N  G F    
Sbjct: 90  RALFTATVEKFGRVDVLFNNAGTGAPAIPXEDL------TFAQWKQVVDTNLTGPF---- 139
Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAG 184
           L  Q        ++   G IIN  SI+A   +     Y+A+K  I G+T   + D     
Sbjct: 140 LCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDG---- 195
Query: 185 IRVNTIAPGLFD 196
            RV+ IA G  D
Sbjct: 196 -RVHDIACGQID 206

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G V +VTG + G+G A             L      +  +V +E+   G + +    D
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNT 116
           ++  + +         + G+ DV VN AG+        +  G +H++   ++  ++ VN 
Sbjct: 87  LSHSDAIAAFATGVLAAHGRCDVLVNNAGV-------GWFGGPLHTMKPAEWDALIAVNL 139
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              + + R  A  +   K      RG IIN +S+A     +   AY+ASK G+ G+    
Sbjct: 140 KAPYLLLRAFAPAMIAAK------RGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSA 193
Query: 177 ARDLAGAGIRVNTIAPGLFDT 197
           A +L    +RV+ +APG   T
Sbjct: 194 AEELRQHQVRVSLVAPGSVRT 214

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 46  KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
           ++LG        D+T+  +V+ A+    D FG++   V+ AG   A K       T+  +
Sbjct: 54  EKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARK-------TIAEM 106
Query: 106 DD--FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-GQVAY 162
           D+  + ++L VN    F        L  +  L +    G I+  +S A  +G   G +AY
Sbjct: 107 DEAFWHQVLDVNLTSLF--------LTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAY 158
Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE-KVRNFLARSIPAPQRL 221
           + SK  ++  T  +A+++ G  IRVN + PG+  T       + +VR  +A +  + +R 
Sbjct: 159 ATSKGAVMTFTRGLAKEV-GPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGA-TSLKRE 216
Query: 222 GHPDEFAQLVQSIITN--PLINGEVIRIDGAL 251
           G  ++ A LV  + ++    + G    I+G +
Sbjct: 217 GSSEDVAGLVAFLASDDAAYVTGACYDINGGV 248

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 13/188 (6%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTG  +G G+                       + +  ELG ++  A +DV +   +++
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEE 63
Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR-LS 126
            +      +  +D+ VN AG++   +          S++D++ ++  N  G   + R + 
Sbjct: 64  MLASLPAEWCNIDILVNNAGLALGME-----PAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 127 AQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIR 186
             ++  N        G IIN  S A     +G   Y A+K+ +   +L +  DL G  +R
Sbjct: 119 PGMVERN-------HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVR 171
Query: 187 VNTIAPGL 194
           V  I PGL
Sbjct: 172 VTDIEPGL 179

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 34/229 (14%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC--DLPTSE-GESVAKELGPDVKFAPVD 58
           LKG V  VTG + G+G A             +     P  E  E + K  G   K    +
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKG---TVHSLDDFKRILLVN 115
           ++  + V++ +   +  FG +DV V  AG++       + +G    V + D + +I+ V+
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVT-------WTQGPEIDVDNYDSWNKIISVD 144
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG--------QVAYSASKS 167
             G +  +    ++  +N       +G +I T+SI      SG        Q  Y+ +K+
Sbjct: 145 LNGVYYCSHNIGKIFKKNG------KGSLIITSSI------SGKIVNIPQLQAPYNTAKA 192
Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP 216
               +   +A + A    RVNTI+PG  DT +    ++ ++    +  P
Sbjct: 193 ACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTP 240

>pdb|3RJ5|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila Lebanonesis T114v Mutant Complexed With Nad+ Length = 254

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 37  PTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL---DVNVNCAGISCAFK 93
           PT+  E  A     ++ F   DVT    V ++  L K  F +L   D+ +N AGI     
Sbjct: 42  PTALAELKAINPKVNITFHTYDVTVP--VAESKKLLKKIFDQLKTVDILINGAGI----- 94
Query: 94  IFNYNKGTVHSLDDFK--RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA 151
                      LDD +  R + +N  G  NV         + K    G  G+I N  S+ 
Sbjct: 95  -----------LDDHQIERTIAINFTGLVNVTTAILDFWDKRK---GGPGGIIANICSVT 140
Query: 152 AYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL 211
            +        YSASK+ +V  T  +A+     G+   +I PG+  TPL+   N  +    
Sbjct: 141 GFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLD--- 197
Query: 212 ARSIPAPQRLGHPDEFAQ-----LVQSIITNPLINGEVIRID-GALRMI 254
                A   L HP + ++      V++I  N   NG + ++D G L  I
Sbjct: 198 VEPRVAELLLSHPTQTSEQCGQNFVKAIEANK--NGAIWKLDLGTLEAI 244

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 150 IAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------L 203
           +A  +GQ+  +AY+ SK  +  +      D AG G+R+N +APG  +TPLL         
Sbjct: 142 LAEQQGQT-HLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY 200
Query: 204 NEKVRNFLARSIPAP-QRLGHPDEFAQLVQSII--TNPLINGEVIRIDGAL 251
            E  R F+     AP  R   P E A+ +  ++      I+G V+ +DG +
Sbjct: 201 GESTRRFV-----APLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGM 246

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 96/254 (37%), Gaps = 18/254 (7%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L+G   +VTGG  G+G+              +    T++ ++   +L       V     
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV+             + FG +DV    AG+      F        + +    I  VN  
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGV------FPDAPLATMTPEQLNGIFAVNVN 121
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           GTF   +        + L   G   V++ ++      G  G   Y A+K+  +G     A
Sbjct: 122 GTFYAVQACL-----DALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAA 176
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
            +LA   I VN I PG   T  L    E+    +ARSIPA   LG P++   L   + T 
Sbjct: 177 IELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPA-GALGTPEDIGHLAAFLATK 235
Query: 238 P--LINGEVIRIDG 249
               I G+ I +DG
Sbjct: 236 EAGYITGQAIAVDG 249

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 24/184 (13%)
Query: 76  FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKL 135
            G+LD+ VN AG+    +I      T  +  D+   L VN    F + R +  L      
Sbjct: 92  LGRLDIVVNNAGVISRGRI------TETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGG 145
Query: 136 NEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF 195
                   I+N AS        G   Y  +K+ +  +T     D A  GIR+N + P   
Sbjct: 146 GA------IVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEV 199
Query: 196 DTPLLSMLNEKVRNF--------LARSIPAPQRLGHPDEFAQLVQSIITNP--LINGEVI 245
           +TP L     K R F        L R++P   R+  P++ A +V  + ++    + G ++
Sbjct: 200 NTPXLRTGFAK-RGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLASDAARYLCGSLV 257
Query: 246 RIDG 249
            ++G
Sbjct: 258 EVNG 261

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 76  FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKL 135
           FGK+D+ VN AG + A    N    T   ++ +++   +N      + + + + + + K 
Sbjct: 104 FGKIDILVNNAGANLADGTAN----TDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK- 158
Query: 136 NEDGLRGVIINTASI-AAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGL 194
                 G I+N +SI A  +  SG   Y+ +K+ +   T   A DL   G+RVN+++PG 
Sbjct: 159 ------GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGA 212
Query: 195 FDTPLLSML------NEKVRNFLA---RSIPAPQRLGHPDEFAQLV 231
             T  +  +      ++K+ +F+      IP     G P+E A ++
Sbjct: 213 VATGFMGAMGLPETASDKLYSFIGSRKECIPVGH-CGKPEEIANII 257

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEE-- 63
           V LVTG +SG G+A                  T   + +        +   +DVT  E  
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERI 66
Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
           DV  A +L +  +G++DV VN AG +   ++  + + T   L D   + +      F  A
Sbjct: 67  DVVAADVLAR--YGRVDVLVNNAGRT---QVGAFEETTERELRDLFELHV------FGPA 115
Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
           RL+  L+ + +  E G  G ++N +S       +G  AYSA+K+ +  ++  +A ++A  
Sbjct: 116 RLTRALLPQXR--ERG-SGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPF 172
Query: 184 GIRVNTIAPGLFDTPLL 200
           GI+V  + PG F T L 
Sbjct: 173 GIKVLIVEPGAFRTNLF 189

>pdb|1A4U|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Length = 254

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 37  PTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL---DVNVNCAGISCAFK 93
           PT+  E  A     ++ F   DVT    V ++  L K  F +L   D+ +N AGI     
Sbjct: 42  PTALAELKAINPKVNITFHTYDVTVP--VAESKKLLKKIFDQLKTVDILINGAGI----- 94
Query: 94  IFNYNKGTVHSLDDFK--RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA 151
                      LDD +  R + +N  G  N          + K    G  G+I N  S+ 
Sbjct: 95  -----------LDDHQIERTIAINFTGLVNTTTAILDFWDKRK---GGPGGIIANICSVT 140
Query: 152 AYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL 211
            +        YSASK+ +V  T  +A+     G+   +I PG+  TPL+   N  +    
Sbjct: 141 GFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLD--- 197
Query: 212 ARSIPAPQRLGHPDEFAQ-----LVQSIITNPLINGEVIRID-GALRMI 254
                A   L HP + ++      V++I  N   NG + ++D G L  I
Sbjct: 198 VEPRVAELLLSHPTQTSEQCGQNFVKAIEANK--NGAIWKLDLGTLEAI 244

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 72  CKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV--------NTVGTFNVA 123
           C   +G+ DV VN A       +   + G   S    K  L V        N +  + + 
Sbjct: 97  CYMHWGRCDVLVNNASSFYPTPLLRKDAGEGGSSVGDKESLEVAAADLFGSNAIAPYFLI 156
Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
           +  AQ + + +  + G    I+N       +   G   Y+ +K  + G+T   A +LA  
Sbjct: 157 KAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLLGYTMYTMAKEALEGLTRSAALELASL 216
Query: 184 GIRVNTIAPGLF----DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
            IRVN ++PGL     D P    + E  R    R +P  QR    +E + +V   + +P 
Sbjct: 217 QIRVNGVSPGLSVLPDDMPF--SVQEDYR----RKVPLYQRNSSAEEVSDVVI-FLCSPK 269
Query: 239 --LINGEVIRIDG 249
              I G  I++DG
Sbjct: 270 AKYITGTCIKVDG 282

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 109/266 (40%), Gaps = 40/266 (15%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V L+TG  SG+G+AT                  +E E VA E+   G        DV+ E
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK-----RILLVNTV 117
              + AV      FG LD+ V  AGI+          G    +DD K       + VN  
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGIN----------GVWAPIDDLKPFEWDETIAVNLR 139
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--QSGQVAYSASKSGIVGMTLP 175
           GTF    L+   + +         G I+  +SI         G  AY+A+K+  V +   
Sbjct: 140 GTFLTLHLTVPYLKQRG------GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQ 193
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP-------APQRLGHP---D 225
           +A +L    IRVN + PG  +T +    N K+R+    +IP        P   G P   +
Sbjct: 194 LALELGKHHIRVNAVCPGAIETNISD--NTKLRHEEETAIPVEWPKGQVPITDGQPGRSE 251
Query: 226 EFAQLVQSIITNPL--INGEVIRIDG 249
           + A+L++ +++     + G  + IDG
Sbjct: 252 DVAELIRFLVSERARHVTGSPVWIDG 277

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 88/233 (37%), Gaps = 27/233 (11%)
Query: 4   GVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA---KELGPDVKFAPVDVT 60
           G + L+TG   G+G+ T            L D+     E  A   K LG  V    VD +
Sbjct: 31  GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCS 90
Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           + ED+  +    K   G + + VN AG+     +F      +      ++   VN +  F
Sbjct: 91  NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQI------EKTFEVNVLAHF 144
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              +     + +N        G I+  AS A +      +AY +SK   VG    +  +L
Sbjct: 145 WTTKAFLPAMTKNN------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDEL 198
Query: 181 AG---AGIRVNTIAPGLFDTPLL---------SMLNEKVRNFLARSIPAPQRL 221
           A     G++   + P   +T  +         ++  E+V N L   I   Q++
Sbjct: 199 AALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQKM 251

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 12/192 (6%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPV--DVTSEEDV 65
            +TG  SG G+A             L        +++A EL    +  P+  DV      
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAX 84
Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
             AV    + F  L   +N AG++        +      LDD+   +  N  G     RL
Sbjct: 85  SAAVDNLPEEFATLRGLINNAGLA-----LGTDPAQSCDLDDWDTXVDTNIKGLLYSTRL 139
Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
                   +L   G    I+N  S+A      G   Y  +K+ +   +L +  DL G G+
Sbjct: 140 LLP-----RLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGV 194
Query: 186 RVNTIAPGLFDT 197
           RV  + PGL ++
Sbjct: 195 RVTNLEPGLCES 206

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 19/200 (9%)
Query: 8   LVTGGASGLGKATXXXXXXXX---XXXXLCDLPTSEGESVAKELGPD-----VKFAPVDV 59
           L+TG ++G+GKAT               L      + E + K +  +     V  A +D+
Sbjct: 37  LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI 96
Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           T  E ++  +      F  +D+ VN AG     K    ++    + +D + +   N    
Sbjct: 97  TQAEKIKPFIENLPQEFKDIDILVNNAG-----KALGSDRVGQIATEDIQDVFDTNVTAL 151
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
            N+ +    +            G I+N  SIA  +       Y ASK  +   T  + ++
Sbjct: 152 INITQAVLPIFQAKN------SGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKE 205
Query: 180 LAGAGIRVNTIAPGLFDTPL 199
           L    IRV  IAPGL +T  
Sbjct: 206 LINTKIRVILIAPGLVETEF 225

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 78  KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNE 137
           K D+ +N AGI     I    + T      F R + VN    F + + +   + +N    
Sbjct: 91  KFDILINNAGIGPGAFI----EETTEQF--FDRXVSVNAKAPFFIIQQALSRLRDNSR-- 142
Query: 138 DGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT 197
                 IIN +S A        +AYS +K  I   T  +A+ L   GI VN I PG   T
Sbjct: 143 ------IINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKT 196
Query: 198 PL-LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP---LINGEVIRIDG 249
                +L++      A +I A  RLG  ++ A    + + +P    + G++I + G
Sbjct: 197 DXNAELLSDPXXKQYATTISAFNRLGEVEDIAD-TAAFLASPDSRWVTGQLIDVSG 251

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 42  ESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYN 98
           E VAK++   G        D+T +  V   V     ++G++DV +N A     F++ +  
Sbjct: 49  EDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNA-----FRVPSMK 103
Query: 99  KGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG 158
                + +  +  + +   G   + +     + E+K       G ++N  S+     Q+ 
Sbjct: 104 PFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-------GAVVNVNSMVVRHSQAK 156
Query: 159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
             AY  +KS ++ M+  +A +L   GIRVN++ PG
Sbjct: 157 YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPG 191

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 21/198 (10%)
Query: 4   GVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKF--------- 54
           G V +VTG  +GLG+              + DL  +     A +   D+           
Sbjct: 19  GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE 78
Query: 55  APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
           A  D  S  D  K +     +FG++D+ VN AGI     +   ++   + ++D      V
Sbjct: 79  AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVND------V 132
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           +  G+F   +  A   +  K N     G II T+S +   G  GQV Y+A+K G++G+  
Sbjct: 133 HLKGSFKCTQ--AAFPYMKKQN----YGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLAN 186
Query: 175 PMARDLAGAGIRVNTIAP 192
            +A + A   +  N I P
Sbjct: 187 TVAIEGARNNVLCNVIVP 204

>pdb|1MG5|A Chain A, Crystal Structure Of Drosophila Melanogaster Alcohol Dehydrogenase Complexed With Nadh And Acetate At 1.6 A Length = 255

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 52  VKFAPVDVTSEEDVQKAVLLCKDSFGKL---DVNVNCAGISCAFKIFNYNKGTVHSLDD- 107
           V F P DVT    + +   L K  F +L   DV +N AGI                LDD 
Sbjct: 58  VTFYPYDVTVP--IAETTKLLKTIFAQLKTVDVLINGAGI----------------LDDH 99
Query: 108 -FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
             +R + VN  G  N    +A L   +K  + G  G+I N  S+  +        YS +K
Sbjct: 100 QIERTIAVNYTGLVNTT--TAILDFWDK-RKGGPGGIICNIGSVTGFNAIYQVPVYSGTK 156
Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDE 226
           + +V  T  +A+     G+   T+ PG+  T L+   N  +         A + L HP +
Sbjct: 157 AAVVNFTSSLAKLAPITGVTAYTVNPGITRTTLVHKFNSWLD---VEPQVAEKLLAHPTQ 213
Query: 227 FA-----QLVQSIITNPLINGEVIRID-GALRMI 254
            +       V++I  N   NG + ++D G L  I
Sbjct: 214 PSLACAENFVKAIELNQ--NGAIWKLDLGTLEAI 245

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 20/242 (8%)
Query: 6   VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAP--VDVT 60
           + LVTG + G+G A              C       E +A E    G      P   D++
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93
Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           +EED+       +     +D+ +N AG++    + +       S   +K +  VN +   
Sbjct: 94  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLS------GSTSGWKDMFNVNVLALS 147
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA--YSASKSGIVGMTLPMAR 178
              R + Q + E  +++    G IIN  S++ +      V   YSA+K  +  +T  + +
Sbjct: 148 ICTREAYQSMKERNVDD----GHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 203
Query: 179 DL--AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           +L  A   IR   I+PG+ +T     L++K     A +    + L  P++ A+ V  +++
Sbjct: 204 ELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCL-KPEDVAEAVIYVLS 262
Query: 237 NP 238
            P
Sbjct: 263 TP 264

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
           G +I   S A      G   Y+ASK  + G+     ++ A  GIRV+T++PG  +TP+L 
Sbjct: 126 GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ 185
Query: 202 -MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            +++ +  NF       P+    P E A  ++ +I
Sbjct: 186 GLMDSQGTNF------RPEIYIEPKEIANAIRFVI 214

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 35/268 (13%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG--ESVA--KELGPDVKFAPV 57
           L G V L TG   G+G+              +    +S+   E VA  K+LG        
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78
Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D++   +V          FG LD  ++ +G+          +      + F ++  +NT 
Sbjct: 79  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQ------ELFDKVFNLNTR 132
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPM 176
           G F VA+   +             G II T+SIAA   G      Y+ SK+ + G     
Sbjct: 133 GQFFVAQQGLKHCRRG--------GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAF 184
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLS-------------MLNEKVRNFLARSIPAPQRLGH 223
           A D    G+ VN IAPG   T +               M  EK+   LA   P  +R+G+
Sbjct: 185 AVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGY 243
Query: 224 PDEFAQLVQSIIT--NPLINGEVIRIDG 249
           P +  + V ++    +  ING+VI++ G
Sbjct: 244 PADIGRAVSALCQEESEWINGQVIKLTG 271

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 17/201 (8%)
Query: 2   LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVK-FAPV 57
           L   V +VTGG+SG+G AT             C          ES  ++  P  + FA V
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 58  -DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DV     V+     C+ + G   + VN AG     ++  + + T  +  +  ++   + 
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQG---RVSTFAETTDEAWSEELQLKFFSV 122
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           +    V     QL       E      I+   S+ A + +   VA SA+++G+  +   M
Sbjct: 123 I--HPVRAFLPQL-------ESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSM 173
Query: 177 ARDLAGAGIRVNTIAPGLFDT 197
           A + A  G+RVN I  GL ++
Sbjct: 174 AFEFAPKGVRVNGILIGLVES 194

>pdb|3L6E|A Chain A, Crystal Structure Of Putative Short Chain DehydrogenaseREDUCTASE Family Oxidoreductase From Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966 Length = 235

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 13/185 (7%)
Query: 8   LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           +VTG  SGLG+A                      +     LG  V     D+   EDV  
Sbjct: 7   IVTGAGSGLGRALTIGLVERGHQVSXXGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDV 66
Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
           A     +  G  ++ ++CAG         +    V++ +  +R+   N V T  VA+ + 
Sbjct: 67  AFAAAVEWGGLPELVLHCAGTG------EFGPVGVYTAEQIRRVXESNLVSTILVAQQTV 120
Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
           +LI E         GV+ N  S AA  G++ +  Y ASK G  G    +  +L  + +R+
Sbjct: 121 RLIGERG-------GVLANVLSSAAQVGKANESLYCASKWGXRGFLESLRAELKDSPLRL 173
Query: 188 NTIAP 192
             + P
Sbjct: 174 VNLYP 178

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	254
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	1e-138
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-136
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-134
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-129
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-123
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	7e-70
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-69
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-69
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	6e-69
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	6e-68
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-66
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	4e-66
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	4e-66
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-65
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	6e-65
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-64
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-64
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-64
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	6e-64
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	9e-64
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-63
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	4e-63
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	8e-63
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	8e-63
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-62
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-61
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-61
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-61
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	4e-61
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-60
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-60
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-60
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	4e-60
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	7e-60
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-59
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-59
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-59
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-59
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-59
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-59
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	3e-59
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	4e-59
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-59
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-59
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	6e-59
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	9e-59
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-58
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-58
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	4e-58
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-58
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	6e-58
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-57
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-57
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-57
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-57
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	9e-57
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-56
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-56
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-56
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-56
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-56
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	4e-56
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	5e-56
1spx_A	278	Short-chain reductase family member (5L265); paral	8e-56
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-55
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-55
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	5e-55
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	6e-55
1xhl_A	297	Short-chain dehydrogenase/reductase family member	7e-55
1xkq_A	280	Short-chain reductase family member (5D234); parra	9e-55
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-54
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-54
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-54
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	4e-54
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	5e-54
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-53
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-53
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-53
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-52
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	4e-52
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	7e-52
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	7e-52
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	7e-52
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-51
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-51
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-51
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-51
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-51
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-51
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-51
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-51
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-51
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	5e-51
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	5e-51
3rih_A	293	Short chain dehydrogenase or reductase; structural	6e-51
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	6e-51
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-51
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	9e-51
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-50
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-50
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-50
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-50
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-50
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-50
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-50
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-50
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	7e-50
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	9e-50
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-49
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-49
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-49
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-49
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-49
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	4e-49
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	4e-49
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	4e-49
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	7e-49
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	9e-49
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-48
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-48
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-48
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-48
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	5e-48
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	7e-48
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	9e-48
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-47
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-47
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-47
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	4e-47
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	4e-47
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	5e-47
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-47
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	9e-47
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	9e-47
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-46
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-46
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-46
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-46
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-46
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-46
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	5e-46
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-45
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-45
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-45
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-45
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	8e-45
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	9e-45
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-44
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-44
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	5e-44
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	9e-44
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-43
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-42
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	6e-42
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	7e-42
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-41
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-41
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-41
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	5e-41
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-39
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-38
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-36
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-36
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	4e-36
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	7e-36
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-35
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-35
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	4e-34
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-33
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	8e-33
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-32
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-32
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	9e-32
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-31
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	9e-28
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-31
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-30
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	8e-30
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-29
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-29
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-27
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-24
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-22
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-22
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	4e-21
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	9e-20
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	7e-18
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-12
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-09
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	9e-07
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-06
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-05
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	2e-04
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	4e-04
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	5e-04
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	5e-04
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	6e-04
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	6e-04
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	7e-04
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	8e-04

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  389 bits (1001), Expect = e-138
 Identities = 160/252 (63%), Positives = 195/252 (77%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG AT ER+V +G   VL DLP S GE+ AK+LG +  FAP DVTS
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 69

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+DVQ A+ L K  FG++DV VNCAGI+ A K +N  KG  H+L+DF+R+L VN +GTFN
Sbjct: 70  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 129

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 130 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 189

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L EKV NFLA  +P P RLG P E+A LVQ+II NP +N
Sbjct: 190 PIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 249

Query: 242 GEVIRIDGALRM 253
           GEVIR+DGA+RM
Sbjct: 250 GEVIRLDGAIRM 261

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  381 bits (981), Expect = e-136
 Identities = 124/252 (49%), Positives = 168/252 (66%), Gaps = 2/252 (0%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           LK  V +VTG +SGLG A    + +EG  V+  DL    GE  A ELG  V+F   DVT+
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTN 64

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E D   A+   K  FG +   VNCAG +   KI    +   H+LD F R + VN +GTFN
Sbjct: 65  EADATAALAFAKQEFGHVHGLVNCAGTAPGEKILG--RSGPHALDSFARTVAVNLIGTFN 122

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + RL+A+++ + + + DG RGVI+NTASIAA++GQ GQ AY+ASK G+  +TLP AR+LA
Sbjct: 123 MIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELA 182

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPG+FDTP+++ + + V++ LA S+P P RLG  +E+A LV+ I  N ++N
Sbjct: 183 RFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICENTMLN 242

Query: 242 GEVIRIDGALRM 253
           GEVIR+DGALRM
Sbjct: 243 GEVIRLDGALRM 254

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  378 bits (972), Expect = e-134
 Identities = 108/252 (42%), Positives = 152/252 (60%), Gaps = 1/252 (0%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +G   +V+GGA GLG+ATV R+  +G  VV+ DL   +G+++A ELG   +F   +VTS
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS 87

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+ V  A+             V   G   A +I     G+   +  F + + +   GT+N
Sbjct: 88  EDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQ-RDGSPADMGGFTKTIDLYLNGTYN 146

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           VARL A  I   +  E+G RG ++ TASIA YEGQ GQ AY+A+K+G++G+T+  ARDL+
Sbjct: 147 VARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLS 206

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
            AGIRVNTIAPG   TP++  + E+     A +IP P+RLG PDEFA     ++TN  IN
Sbjct: 207 SAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNGYIN 266

Query: 242 GEVIRIDGALRM 253
           GEV+R+DGA R 
Sbjct: 267 GEVMRLDGAQRF 278

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  364 bits (937), Expect = e-129
 Identities = 129/254 (50%), Positives = 172/254 (67%), Gaps = 8/254 (3%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           ++  V +VTGGASGLG AT +R++  G +VV+ D+    GE V  +LG   +FA  DVT 
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAADVTD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E  V  A+    ++ G L + VNCAG   A ++ +  +  V SL  F++I+ +N VG+FN
Sbjct: 64  EAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLS--RDGVFSLAAFRKIVDINLVGSFN 120

Query: 122 VARLSAQLIHENK--LNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           V RL+A+ I + +        RGVIINTAS+AA++GQ GQ AYSASK G+VGMTLP+ARD
Sbjct: 121 VLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARD 180

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL 239
           LA   IRV TIAPGLFDTPLL+ L E+ R  L + +P P RLG+PDE+  L   II NP+
Sbjct: 181 LASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENPM 240

Query: 240 INGEVIRIDGALRM 253
           +NGEVIR+DGA+RM
Sbjct: 241 LNGEVIRLDGAIRM 254

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  350 bits (900), Expect = e-123
 Identities = 128/248 (51%), Positives = 165/248 (66%), Gaps = 12/248 (4%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
             LVTGGASGLG+A    +   G RVV+ DL         +  G D+ +   DVT EEDV
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVLDL---------RREGEDLIYVEGDVTREEDV 54

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
           ++AV   ++    L   V+ AG+  A KI    K   H L+ F+R+L VN +GTFNV RL
Sbjct: 55  RRAVARAQE-EAPLFAVVSAAGVGLAEKILG--KEGPHGLESFRRVLEVNLLGTFNVLRL 111

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
           +A  + EN  + +G RGVI+NTAS+AA+EGQ GQ AY+ASK G+V +TLP AR+LAG GI
Sbjct: 112 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 171

Query: 186 RVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVI 245
           RV T+APGLFDTPLL  L EK +  LA  +P P RLG P+E+A LV  I+ NP++NGEV+
Sbjct: 172 RVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVV 231

Query: 246 RIDGALRM 253
           R+DGALRM
Sbjct: 232 RLDGALRM 239

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  214 bits (547), Expect = 7e-70
 Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 26/256 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   ++TGGA GLG     + V  G RVVL D+   EG + A+ELG   ++  +DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           EED Q+ V   ++ FG +D  VN AGIS    +         S++ F++++ +N  G F 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE------SVERFRKVVEINLTGVFI 116

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     + +         G I+N +S A   G +   +Y ASK G+ G++   A +L 
Sbjct: 117 GMKTVIPAMKDAG------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGH-PDEFAQLV-------QS 233
              IRVN++ PG+  TP+ +    +       + P   R+G+ P E A  V        S
Sbjct: 171 TDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPM-GRVGNEPGEIAGAVVKLLSDTSS 229

Query: 234 IITNPLINGEVIRIDG 249
            +T     G  + +DG
Sbjct: 230 YVT-----GAELAVDG 240

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  213 bits (544), Expect = 3e-69
 Identities = 83/257 (32%), Positives = 118/257 (45%), Gaps = 34/257 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V LV+GGA G+G + V  +V EG +VV  D+   EG+++A EL    ++  +DVT 
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ 64

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
               + AV     +FG L V VN AGI     I +Y      +L +++RIL VN  G F 
Sbjct: 65  PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDY------ALTEWQRILDVNLTGVFL 118

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             R   + + E        RG IIN +SI    G      Y+A+K  + G+T   A +L 
Sbjct: 119 GIRAVVKPMKEAG------RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 172

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL-- 239
            +GIRVN+I PGL  TP+   + E +            R   P E + LV       +  
Sbjct: 173 PSGIRVNSIHPGLVKTPMTDWVPEDIFQ-----TAL-GRAAEPVEVSNLV-------VYL 219

Query: 240 -------INGEVIRIDG 249
                    G    +DG
Sbjct: 220 ASDESSYSTGAEFVVDG 236

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  213 bits (544), Expect = 4e-69
 Identities = 78/261 (29%), Positives = 115/261 (44%), Gaps = 31/261 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L   V +VTGG SG+G+AT E   + G  VV+ D+       VA E+G       VDV+S
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSS 84

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            +D +  V      +G++DV VN AG      +           + + RI+ VN  G F 
Sbjct: 85  AKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTI------PEETWDRIMSVNVKGIFL 138

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            ++    ++  N        G IINT S  A    + + AY ASK  I  +T  MA D A
Sbjct: 139 CSKYVIPVMRRNG------GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHA 192

Query: 182 GAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLV---- 231
             GIRVN +APG  D+P  + +        K+R+          R+G  +E A+ +    
Sbjct: 193 KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVM-DRMGTAEEIAEAMLFLA 251

Query: 232 ---QSIITNPLINGEVIRIDG 249
                  T     G ++ +DG
Sbjct: 252 SDRSRFAT-----GSILTVDG 267

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  212 bits (542), Expect = 6e-69
 Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 24/256 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+  V ++TG   G+G  T   + R G RVVL DLP ++    A  +G       VD+T+
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTN 68

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E  V+  +    D+FG+LD+  N A  S           T  ++D +     VN  GT  
Sbjct: 69  EVSVRALIDFTIDTFGRLDIVDNNAAHS----DPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + + +   +           G I+N +S  A+       AY+ +K+ I  +T  +A    
Sbjct: 125 MCKYAIPRLISAG------GGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYG 178

Query: 182 GAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLV-------QS 233
             G+R N IAPGL  TP L   L + + +  A    A  R+G P E A+LV        +
Sbjct: 179 RHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAG-RIGEPHEIAELVCFLASDRAA 237

Query: 234 IITNPLINGEVIRIDG 249
            IT     G+VI  D 
Sbjct: 238 FIT-----GQVIAADS 248

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  210 bits (537), Expect = 6e-68
 Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 32/262 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V +VTG  +G+G A   R+  EG  V+  D+     ++ A ++G       VDV+ 
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSD 86

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+ +   V  C  +FG +D  V  AG+     + +       +++DF R++ +N  G + 
Sbjct: 87  EQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT------TVEDFDRVIAINLRGAWL 140

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             + +A  + E         G I+N +S+A      G  AY  SK+GI+ ++   A +L 
Sbjct: 141 CTKHAAPRMIERG------GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR 194

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKV-------RNFLARSIPAPQRLGHPDEFAQLVQ-- 232
            +GIR NT+ P   DTP+                     +     R+  P+E A +V   
Sbjct: 195 SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQ-GRMAAPEEMAGIVVFL 253

Query: 233 -----SIITNPLINGEVIRIDG 249
                S+IT     G     DG
Sbjct: 254 LSDDASMIT-----GTTQIADG 270

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  206 bits (526), Expect = 1e-66
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 33/264 (12%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFA 55
           M+ G V LVTG A G+G+A  E ++ +G +V L D     G      L          F 
Sbjct: 4   MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFI 63

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DV  ++ ++       D FG+LD+ VN AG++              +  ++++ L +N
Sbjct: 64  QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------------NEKNWEKTLQIN 109

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT-- 173
            V   +   L    + +      G  G+IIN +S+A     + Q  Y ASK GIVG T  
Sbjct: 110 LVSVISGTYLGLDYMSKQN---GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 166

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK--------VRNFLARSIPAPQRLGHPD 225
             +A +L  +G+R+N I PG  +T +L  + ++         ++ +   I     +  P 
Sbjct: 167 AALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY-YGILDPP 225

Query: 226 EFAQLVQSIITNPLINGEVIRIDG 249
             A  + ++I +  +NG +++I  
Sbjct: 226 LIANGLITLIEDDALNGAIMKITT 249

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  205 bits (523), Expect = 4e-66
 Identities = 82/259 (31%), Positives = 121/259 (46%), Gaps = 24/259 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V L+TG  SG G+   +R  + G +VV+ D   +  E VA E+G        D++ 
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISK 66

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E DV  AV      FGK+D+ VN AGI    +        +   ++F RI+ VN  G + 
Sbjct: 67  EADVDAAVEAALSKFGKVDILVNNAGIGHKPQNA-----ELVEPEEFDRIVGVNVRGVYL 121

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +         EN     G   VI+N AS  A   +     Y+A+K  +V +T  +A +LA
Sbjct: 122 MTSKLIPHFKENG--AKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELA 179

Query: 182 GAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFAQLVQ----- 232
            A IRV  + P   +TPLL+      +E++R     SIP   RL  PD+ A+        
Sbjct: 180 PAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM-GRLLKPDDLAEAAAFLCSP 238

Query: 233 --SIITNPLINGEVIRIDG 249
             S+IT     G  + +DG
Sbjct: 239 QASMIT-----GVALDVDG 252

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  204 bits (522), Expect = 4e-66
 Identities = 77/266 (28%), Positives = 118/266 (44%), Gaps = 37/266 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTGGASG+G   V+ ++ EG +V   D+  + G+ +A ELG    F   DV+S
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E D    +   +   G L+V VN AGI     +          L+DF R+L +NT   F 
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETG------RLEDFSRLLKINTESVFI 117

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     + E         G IIN AS++++        YSASK+ +  +T   A    
Sbjct: 118 GCQQGIAAMKETG-------GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR 170

Query: 182 --GAGIRVNTIAPGLFDTPLLSML-----NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
             G  IRVN+I P    TP++        ++++     +   A  R   P+  AQLV   
Sbjct: 171 KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG-RAYMPERIAQLV--- 226

Query: 235 ITNPL---------INGEVIRIDGAL 251
               L         ++G  +  D ++
Sbjct: 227 ----LFLASDESSVMSGSELHADNSI 248

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  203 bits (519), Expect = 2e-65
 Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 35/262 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             G V +VTGG  G+G   V   V  G RVV+CD   S G ++ +EL     F   DVT 
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQ 65

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
           E+DV+  V      FG+LD  VN AG                  S   F+++L +N +GT
Sbjct: 66  EDDVKTLVSETIRRFGRLDCVVNNAGHH-------PPPQRPEETSAQGFRQLLELNLLGT 118

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           + + +L+   + +++       G +IN +S+    GQ+  V Y A+K  +  MT  +A D
Sbjct: 119 YTLTKLALPYLRKSQ-------GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALD 171

Query: 180 LAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLV-- 231
            +  G+RVN I+PG   TPL   L                + P   R+G P E       
Sbjct: 172 ESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL-GRMGQPAEVGAAAVF 230

Query: 232 ----QSIITNPLINGEVIRIDG 249
                +  T     G  + + G
Sbjct: 231 LASEANFCT-----GIELLVTG 247

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  201 bits (514), Expect = 6e-65
 Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 29/260 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDV 59
           L G V ++TGG  G+G A   + V EG +V++    +  GE  AK +G    ++F   D 
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           + E+   K     + +FG +   VN AGI+    +         +  +++++L VN  G 
Sbjct: 64  SDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEET------TTAEWRKLLAVNLDGV 117

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F   RL  Q +        GL   IIN +SI  + G     AY+ASK  +  M+   A D
Sbjct: 118 FFGTRLGIQRMKNK-----GLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172

Query: 180 LA--GAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLV----- 231
            A     +RVNT+ PG   TPL+  +   +         P    +G P++ A +      
Sbjct: 173 CALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM-GHIGEPNDIAYICVYLAS 231

Query: 232 --QSIITNPLINGEVIRIDG 249
                 T     G    +DG
Sbjct: 232 NESKFAT-----GSEFVVDG 246

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  201 bits (514), Expect = 1e-64
 Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 45/272 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAP 56
               V L+TGG SGLG+AT  R+  EG ++ L D+ +   E+    +       +V    
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
            DV+ E  V+  V    + FG++D   N AGI                 +  +F +++ +
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ-------NPTESFTAAEFDKVVSI 123

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N  G F       +++ E         G+++NTAS+    G   Q  Y+A+K G+VG+T 
Sbjct: 124 NLRGVFLGLEKVLKIMREQG------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTR 177

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSML--------NEKVRNFLARSIPAPQRLGHPDE 226
             A +    GIR+N IAPG   TP++             K      +  P+  R G   E
Sbjct: 178 NSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK-RYGEAPE 236

Query: 227 FAQLVQSIITNPL---------INGEVIRIDG 249
            A +V                 +N  V+ IDG
Sbjct: 237 IAAVV-------AFLLSDDASYVNATVVPIDG 261

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  200 bits (512), Expect = 2e-64
 Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 34/262 (12%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           +  G   LVTGGA G+G+A  +   REG  V LCDL   EG+ VA+ +G    F  VD+ 
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVAEAIG--GAFFQVDLE 59

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
            E +  + V     + G++DV VN A I+               L +++R+L VN     
Sbjct: 60  DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTV------RLPEWRRVLEVNLTAPM 113

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           +++ L+A+ + +         G I+N AS+     +    AY+ASK G+V +T  +A DL
Sbjct: 114 HLSALAAREMRKVG------GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDL 167

Query: 181 AGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQ-- 232
           A   IRVN +APG   T  +          E+ R          +RLG P+E A+ V   
Sbjct: 168 APLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFL 226

Query: 233 -----SIITNPLINGEVIRIDG 249
                S IT     G ++ +DG
Sbjct: 227 ASEKASFIT-----GAILPVDG 243

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  200 bits (511), Expect = 4e-64
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 23/265 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V L+TGGASGLG+A V+R V EG RV + D        +    G +      DV S
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRS 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            +D ++A   C  +FGK+D  +  AGI         +         F  I  VN  G  +
Sbjct: 63  LQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALA-DLPEDKIDAAFDDIFHVNVKGYIH 121

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     +  +       RG ++ T S A +    G   Y+A+K  +VG+   MA +LA
Sbjct: 122 AVKACLPALVSS-------RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELA 174

Query: 182 GAGIRVNTIAPGLFDTPLLSML----------NEKVRNFLARSIPAPQRLGHPDEFAQLV 231
              +RVN +APG  +T L              +  + + L   +P   R+   +E+    
Sbjct: 175 -PHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI-GRMPALEEYTGAY 232

Query: 232 Q---SIITNPLINGEVIRIDGALRM 253
               +   +    G ++  DG + +
Sbjct: 233 VFFATRGDSLPATGALLNYDGGMGV 257

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  200 bits (510), Expect = 6e-64
 Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 36/269 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFA 55
            +    LVTGG SG+GK     +V  G  V++      +     +EL      G  +++ 
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILL 113
           P D+T+E++  +AV       G+L   V+CAG        + N G +     + ++R + 
Sbjct: 69  PTDITNEDETARAVDAVTAWHGRLHGVVHCAGG-------SENIGPITQVDSEAWRRTVD 121

Query: 114 VNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
           +N  GT  V + +A+ +           G  +  +SIAA        AY  +KS +  + 
Sbjct: 122 LNVNGTMYVLKHAAREMVRGG------GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLM 175

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLV 231
              A +L  + +RVN+I PGL  T L++ +  + ++ +  A   P P R G  ++ A + 
Sbjct: 176 QLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLP-RQGEVEDVANMA 234

Query: 232 Q-------SIITNPLINGEVIRIDGALRM 253
                   S +T     G+VI +DG   +
Sbjct: 235 MFLLSDAASFVT-----GQVINVDGGQML 258

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  198 bits (507), Expect = 9e-64
 Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 32/259 (12%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTS 61
           V +VTG +SG G A   R +  G RV   DL     E  A+         V     DV  
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
           E DV  A+    + FG +DV VN AGI+      N   G +H   ++ F +++ VN  G 
Sbjct: 64  EGDVNAAIAATMEQFGAIDVLVNNAGITG-----NSEAGVLHTTPVEQFDKVMAVNVRGI 118

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F   R     +           GVI+N AS+A+     G+ AY+ SK  ++ +T  +A D
Sbjct: 119 FLGCRAVLPHMLLQG------AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVD 172

Query: 180 LAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQ----- 232
            AG+GIR N + PG+ +TP+        ++R+ +   IP    +G   + A  V      
Sbjct: 173 YAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQK-EIGTAAQVADAVMFLAGE 231

Query: 233 --SIITNPLINGEVIRIDG 249
             + +      G  + +DG
Sbjct: 232 DATYVN-----GAALVMDG 245

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  198 bits (507), Expect = 1e-63
 Identities = 79/274 (28%), Positives = 110/274 (40%), Gaps = 43/274 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
             G V LVTG    +G AT  R+  EG  + L D+     E     +   G + +    D
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VTSEE V   V      FGK+D   N AG   AF          +  DDF R+L +N  G
Sbjct: 65  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPV-----QDYPSDDFARVLTINVTG 119

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F+V +  ++ +           G I+NTAS+A  +G     AY  SK  I+ +T   A 
Sbjct: 120 AFHVLKAVSRQMITQN------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAAL 173

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLN----------------EKVRNFLARSIPAPQRLG 222
           DLA   IRVN I+PG      +                    + V   +  S+P  +R G
Sbjct: 174 DLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRYG 232

Query: 223 HPDEFAQLVQ-------SIITNPLINGEVIRIDG 249
             +E   +V        S +T     G  + I G
Sbjct: 233 DINEIPGVVAFLLGDDSSFMT-----GVNLPIAG 261

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  196 bits (502), Expect = 4e-63
 Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 34/265 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G   ++TG  +G+GK         G  VV+ D+       V  E+   G        D
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           +TSE+++           GK+D+ VN AG                   + DF+R   +N 
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGG---------GGPKPFDMPMADFRRAYELNV 119

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              F++++L A  + +N        GVI+   S+AA        +Y++SK+    +   M
Sbjct: 120 FSFFHLSQLVAPEMEKNG------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNM 173

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           A DL    IRVN IAPG   T  L S++  ++   + +  P  +RLG P + A       
Sbjct: 174 AFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI-RRLGQPQDIANAALFLC 232

Query: 233 ----SIITNPLINGEVIRIDGALRM 253
               S ++     G+++ + G    
Sbjct: 233 SPAASWVS-----GQILTVSGGGVQ 252

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  196 bits (501), Expect = 8e-63
 Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 35/270 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G   L+TG A G+G+A  E  VREG  V + D+        A E+GP      +DVT 
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTR 65

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           ++ +  A+    +  G LD+ VN A +     I         + + ++++  +N  GT  
Sbjct: 66  QDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEI------TRESYEKLFAINVAGTLF 119

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             + +A+     ++   G  G IIN AS A   G++    Y A+K+ ++ +T     DL 
Sbjct: 120 TLQAAAR-----QMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLI 174

Query: 182 GAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPDEFAQL 230
              I VN IAPG+ D      ++            + +  +  ++P   R+G  ++   +
Sbjct: 175 KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPF-GRMGTAEDLTGM 233

Query: 231 VQ-------SIITNPLINGEVIRIDGALRM 253
                      I       +   +DG   M
Sbjct: 234 AIFLASAESDYIV-----SQTYNVDGGNWM 258

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  196 bits (501), Expect = 8e-63
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 33/268 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LK  V +VTG  SG+G+A  ++       VV  +L       + +EL   G +V     D
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           V+ ++DV++ V    +++ ++DV  N AGI             V   S + ++R+L VN 
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGV-------TPVAEVSDELWERVLAVNL 117

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              F  +R    ++ +        +GVI+NTASIA   G      Y+ +K G++G+T  +
Sbjct: 118 YSAFYSSRAVIPIMLKQG------KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSI 171

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLN----EKVRNFLARSIPAPQRLGHPDEFAQLV- 231
           A      GIR   + PG   T +    +      +R        +  RL  P++ A ++ 
Sbjct: 172 AAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSS-RLAEPEDIANVIV 230

Query: 232 -----QSIITNPLINGEVIRIDGALRMI 254
                ++      +NG+ + +DG L ++
Sbjct: 231 FLASDEA----SFVNGDAVVVDGGLTVL 254

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  196 bits (501), Expect = 2e-62
 Identities = 71/265 (26%), Positives = 109/265 (41%), Gaps = 36/265 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G + +VTG +SG+G+A      REG +VV+     +    +  E+   G +      D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           V  E   +  V L    FG LD   N AG   A        G +   S++ ++  L  N 
Sbjct: 66  VGDEALHEALVELAVRRFGGLDTAFNNAGALGAM-------GEISSLSVEGWRETLDTNL 118

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQSGQVAYSASKSGIVGMTLP 175
              F  A+     I           G +  T+S   +  G +G   Y+ASK+G++G+   
Sbjct: 119 TSAFLAAKYQVPAIAALG------GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQA 172

Query: 176 MARDLAGAGIRVNTIAPGLFDTPL----LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           +A +L   GIRVN + PG  DTP     L     + R F+        R+  P+E A+  
Sbjct: 173 LAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALK-RIARPEEIAEAA 231

Query: 232 Q-------SIITNPLINGEVIRIDG 249
                   S +T     G  +  DG
Sbjct: 232 LYLASDGASFVT-----GAALLADG 251

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  193 bits (494), Expect = 1e-61
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 48/268 (17%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
               V +VTGG+SG+G A V+ +VR G +VV   L      +V+           +DVT+
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF-------KIDVTN 64

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
           EE+V++AV      +G++D+ VN AGI             +H    + ++RI+ VN  G+
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILVNNAGIE--------QYSPLHLTPTEIWRRIIDVNVNGS 116

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           + +A+ +  ++           G IIN AS+ +Y       AY  SK  ++G+T  +A D
Sbjct: 117 YLMAKYTIPVMLAIG------HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAID 170

Query: 180 LAGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDEFA 228
            A   IR N + PG   TP++               E+      R  P   R+G P+E A
Sbjct: 171 YA-PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM-GRIGRPEEVA 228

Query: 229 QLV-------QSIITNPLINGEVIRIDG 249
           ++V        S IT     G  + +DG
Sbjct: 229 EVVAFLASDRSSFIT-----GACLTVDG 251

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  193 bits (493), Expect = 2e-61
 Identities = 58/248 (23%), Positives = 95/248 (38%), Gaps = 14/248 (5%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
               + +VTG  SG+G+A    +   G  V L        +  A E+G D    P DVT 
Sbjct: 26  TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTD 85

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            + V+       + FG++DV  N AG                +   +K+++  N  G F 
Sbjct: 86  PDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPM-----EDLTFAQWKQVVDTNLTGPFL 140

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             + + +++      ++   G IIN  SI+A   +     Y+A+K  I G+T   + D  
Sbjct: 141 CTQEAFRVM----KAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGR 196

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL-- 239
              I    I  G  DTP+   +   V      SI   + +      A  V  + + PL  
Sbjct: 197 VHDIACGQIDIGNADTPMAQKMKAGVPQ-ADLSIKV-EPVMDVAHVASAVVYMASLPLDA 254

Query: 240 -INGEVIR 246
            +    I 
Sbjct: 255 NVQFMTIM 262

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  193 bits (493), Expect = 2e-61
 Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 37/266 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD--VKFAPVDV 59
           L+  V ++TGGA G+G+ T +  VR G +VV+ D+    G+ V   +G    + F   DV
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV 73

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTV 117
           T +EDV+  V       GKLD+     G+            ++     +DFKR++ +N  
Sbjct: 74  TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLST------TPYSILEAGNEDFKRVMDINVY 127

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG-QVAYSASKSGIVGMTLPM 176
           G F VA+ +A+++   K      +G I+ TASI+++    G    Y+A+K  ++G+T  +
Sbjct: 128 GAFLVAKHAARVMIPAK------KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSL 181

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
             +L   GIRVN ++P +  +PLL+ +    + +V     ++      L   ++ A  V 
Sbjct: 182 CTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAV- 240

Query: 233 SIITNPL---------INGEVIRIDG 249
                           ++G  + IDG
Sbjct: 241 ------AYLAGDESKYVSGLNLVIDG 260

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  192 bits (490), Expect = 4e-61
 Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L   V +VTGGA  +G A V  +   G RV++ DL  +      ++L   G DV    +D
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           VT+ E VQ AV    +  G++D+ V CAGI         ++      +   + + + +N 
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILVACAGI-------CISEVKAEDMTDGQWLKQVDINL 123

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--QSGQVAYSASKSGIVGMTL 174
            G F   +   +++ E K      +GVI+   S++         Q AY+ASK+G+     
Sbjct: 124 NGMFRSCQAVGRIMLEQK------QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIR 177

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK--VRNFLARSIPAPQRLGHPDEFAQLVQ 232
            +A + A  GIR N +AP   +T L     EK  + +      P   R+G PDE A +VQ
Sbjct: 178 SLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM-GRVGQPDEVASVVQ 236

Query: 233 -------SIITNPLINGEVIRIDG 249
                  S++T     G ++ +D 
Sbjct: 237 FLASDAASLMT-----GAIVNVDA 255

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  190 bits (485), Expect = 1e-60
 Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 42/264 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V ++T  A G+G+A      REG +V+  D+  S+ + + K  G  ++   +DVT 
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG--IQTRVLDVTK 61

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
           ++ + +      +   +LDV  N AG            GTV      D+   + +N    
Sbjct: 62  KKQIDQFA----NEVERLDVLFNVAGFVHH--------GTVLDCEEKDWDFSMNLNVRSM 109

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQSGQVAYSASKSGIVGMTLPMAR 178
           + + +     +   K       G IIN +S+A+  +G   +  YS +K+ ++G+T  +A 
Sbjct: 110 YLMIKAFLPKMLAQK------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA 163

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLV- 231
           D    GIR N + PG  DTP L          E+ RN   +      R    +E A L  
Sbjct: 164 DFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCV 222

Query: 232 ------QSIITNPLINGEVIRIDG 249
                  + +T     G  + IDG
Sbjct: 223 YLASDESAYVT-----GNPVIIDG 241

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  191 bits (487), Expect = 1e-60
 Identities = 59/274 (21%), Positives = 103/274 (37%), Gaps = 39/274 (14%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
           +L   V +++G    LG     R   +G  +VL        E VAK++   G        
Sbjct: 8   LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGT 67

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+T +  V   V     ++G++DV +N A    + K F        + +  +  + +   
Sbjct: 68  DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPF-----ANTTFEHMRDAIELTVF 122

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G   + +     + E+K       G ++N  S+     Q+   AY  +KS ++ M+  +A
Sbjct: 123 GALRLIQGFTPALEESK-------GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLA 175

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDE 226
            +L   GIRVN++ PG      L               E + N  A      +RL   DE
Sbjct: 176 TELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDL-KRLPTEDE 234

Query: 227 FAQLVQ-------SIITNPLINGEVIRIDGALRM 253
            A  +        S IT     G+ + ++     
Sbjct: 235 VASAILFMASDLASGIT-----GQALDVNCGEYK 263

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  190 bits (486), Expect = 1e-60
 Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 28/260 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG ASG+G+A ++   REG  +V  D            L  +      DV+ 
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            + V+       + FG+L    + AG++ +   +N        L+ ++++L VN  G+F 
Sbjct: 64  PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNL------PLEAWEKVLRVNLTGSFL 117

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           VAR + +++ E         G ++ T S+A   G  G   Y+A K G+VG+   +A +LA
Sbjct: 118 VARKAGEVLEEG--------GSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELA 168

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ-------SI 234
             G+RVN + PGL  TP+ + L          + P   R G P+E AQ          + 
Sbjct: 169 RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAY 227

Query: 235 ITNPLINGEVIRIDGALRMI 254
           IT     G+ + +DG   ++
Sbjct: 228 IT-----GQALYVDGGRSIV 242

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  189 bits (483), Expect = 4e-60
 Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+  V LVT    G+G A   R+ ++G  VV+        +     L   G  V      
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 71

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           V   ED ++ V +  +  G +D+ V+ A +       N   G +   + + + +IL VN 
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAAV-------NPFFGNIIDATEEVWDKILHVNV 124

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
             T  + +     + +         G ++  +S+ AY        Y+ SK+ ++G+T  +
Sbjct: 125 KATVLMTKAVVPEMEKRG------GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNL 178

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQ-- 232
           A +LA   IRVN +APGL  T    +L  ++  + ++  S+   +RLG+P++ A +V   
Sbjct: 179 AVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRI-RRLGNPEDCAGIVSFL 237

Query: 233 -----SIITNPLINGEVIRIDGALRM 253
                S IT     GE + + G    
Sbjct: 238 CSEDASYIT-----GETVVVGGGTAS 258

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  189 bits (483), Expect = 7e-60
 Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 40/275 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
               V L+TG  SG+G+AT   +  +G  V       +E E VA E+   G        D
Sbjct: 26  QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEAD 85

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           V+ E  ++ AV      FG LD+ V  AGI       N     +      ++   + VN 
Sbjct: 86  VSDELQMRNAVRDLVLKFGHLDIVVANAGI-------NGVWAPIDDLKPFEWDETIAVNL 138

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE--GQSGQVAYSASKSGIVGMTL 174
            GTF    L+   + +         G I+  +SI         G  AY+A+K+  V +  
Sbjct: 139 RGTFLTLHLTVPYLKQRG------GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQ 192

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR-------NFLARSIPAPQ-RLGHPDE 226
            +A +L    IRVN + PG  +T +      +          +    +P    + G  ++
Sbjct: 193 QLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSED 252

Query: 227 FAQLVQ-------SIITNPLINGEVIRIDGALRMI 254
            A+L++         +T     G  + IDG   ++
Sbjct: 253 VAELIRFLVSERARHVT-----GSPVWIDGGQGLL 282

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  188 bits (481), Expect = 1e-59
 Identities = 73/270 (27%), Positives = 111/270 (41%), Gaps = 35/270 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   +VTGG+ G+G A    + + G  V + DL     ++V   L        VDVT 
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTK 69

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
              V  A+    D+ G  D+    AG+S      +       + +++     VN  G F 
Sbjct: 70  RASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDI------TDEEWDFNFDVNARGVFL 123

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +++ +            +GVI+NTAS+AA  G      YSASK  + G T  +AR++A
Sbjct: 124 ANQIACR-----HFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMA 178

Query: 182 GAGIRVNTIAPGLFDTPL-----------LSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
              IRVN + PG   T +             M  E VR       P   R+  P++ A +
Sbjct: 179 PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL-GRIEEPEDVADV 237

Query: 231 VQ-------SIITNPLINGEVIRIDGALRM 253
           V          +T     G+ I + G +RM
Sbjct: 238 VVFLASDAARFMT-----GQGINVTGGVRM 262

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  188 bits (479), Expect = 1e-59
 Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 32/264 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKELGPDVKFAPVDVT 60
           LK  + ++TGGA+G+G+A  ER   EG  + + DL  +   E+  + LG  V     DV+
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 64

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGI---SCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
              DV+        +FG+ D+ VN AGI       ++         + + +K+   +N  
Sbjct: 65  QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDEL---------TFEQWKKTFEINVD 115

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             F +A+     +  N        G IIN  S   +        Y ++K+  +G T  +A
Sbjct: 116 SGFLMAKAFVPGMKRNG------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALA 169

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAP-QRLGHPDEFAQLVQ---- 232
            DL   GI VN IAP L  T             +  ++     RL  P +          
Sbjct: 170 SDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS 229

Query: 233 ---SIITNPLINGEVIRIDGALRM 253
              S IT     G+ + +DG +  
Sbjct: 230 DDASFIT-----GQTLAVDGGMVR 248

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  188 bits (480), Expect = 1e-59
 Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 45/266 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+  V +VTG + G+G+A  ER V EG +V+           +             DVT+
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS--------IHDPGEAKYDHIECDVTN 57

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            + V+ ++      +G + V VN AGI    KI +       S+ +++RI+ VN  G + 
Sbjct: 58  PDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESM------SMGEWRRIIDVNLFGYYY 111

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            ++ +   +  ++         I+N +S+ A        AY  SK  ++G+T  +A D A
Sbjct: 112 ASKFAIPYMIRSR------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA 165

Query: 182 GAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDEFAQL 230
              +R N + P   DTPL+               EK  +      P  QR+G P E A  
Sbjct: 166 -PLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM-QRIGKPQEVASA 223

Query: 231 VQ-------SIITNPLINGEVIRIDG 249
           V        S IT     G  + +DG
Sbjct: 224 VAFLASREASFIT-----GTCLYVDG 244

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  187 bits (478), Expect = 2e-59
 Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 33/265 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
            +  VG+VTG   G+G+A  E + REG  VV+ D+     E+VAK++   G       VD
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNT 116
           V+  E  +         FG +D  VN A I    K+       +     + +K+ + VN 
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKL-----DFLLTIDPEYYKKFMSVNL 121

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G     R   + + +         G I+N +S A          Y  +K GI G+T  +
Sbjct: 122 DGALWCTRAVYKKMTKRG------GGAIVNQSSTA---AWLYSNYYGLAKVGINGLTQQL 172

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           +R+L G  IR+N IAPG  DT    +   +++ + + + +P   R+G PD+   +     
Sbjct: 173 SRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPL-SRMGTPDDLVGMCLFLL 231

Query: 233 ----SIITNPLINGEVIRIDGALRM 253
               S IT     G++  +DG   +
Sbjct: 232 SDEASWIT-----GQIFNVDGGQII 251

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  188 bits (479), Expect = 2e-59
 Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 33/267 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           +K  V ++TGG+SG+GK    R  +EG RVV+      + E    E+      +    +D
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 63

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNTV 117
           V + +D+QK +    + FG++D+ +N A         N+       S++ +  ++ +   
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAAG-------NFICPAEDLSVNGWNSVINIVLN 116

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           GTF  ++            E G++G IIN  +  A++   G +  +A+K+G++ MT  +A
Sbjct: 117 GTFYCSQAIG-----KYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLA 171

Query: 178 RDLAG-AGIRVNTIAPGLFDTPLLS---MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ- 232
            +     GIRVN IAPG  +    +    ++E++     +S+P   RLG P+E A L   
Sbjct: 172 VEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPL-GRLGTPEEIAGLAYY 230

Query: 233 ------SIITNPLINGEVIRIDGALRM 253
                 + I      G  + +DG   +
Sbjct: 231 LCSDEAAYIN-----GTCMTMDGGQHL 252

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  187 bits (478), Expect = 2e-59
 Identities = 70/260 (26%), Positives = 103/260 (39%), Gaps = 28/260 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L G   L+TG   G+G          G R+VL     SE ++  + L    G DV    +
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+   +   +      ++FG LDV VN AGIS    + +           F   + VN  
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDT------DPQLFDATIAVNLR 131

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
               +A    +      +   G  G II  AS AA        AY  SK+G+V  T  +A
Sbjct: 132 APALLASAVGK-----AMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLA 186

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLV---- 231
           R+L   GIR N++ P +  T +   +  +E     +   IP   R   P E +  V    
Sbjct: 187 RELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL-GRFAVPHEVSDAVVWLA 245

Query: 232 --QSIITNPLINGEVIRIDG 249
              +     +ING  I +DG
Sbjct: 246 SDAA----SMINGVDIPVDG 261

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  187 bits (478), Expect = 3e-59
 Identities = 57/264 (21%), Positives = 96/264 (36%), Gaps = 38/264 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L   + ++TG  SG+G A  +R V EG RV +        ++   E+G        D  +
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSAN 86

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
             ++ +     K   G++DV    AG      +         + + +      N  G   
Sbjct: 87  LAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEV------TEEQYDDTFDRNVKGVLF 140

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             + +  L+             ++ T S A   G      Y+ASK+ +         DL 
Sbjct: 141 TVQKALPLLARG--------SSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLK 192

Query: 182 GAGIRVNTIAPGLFDTPLLSML-------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
             GIR+NT++PG  +T  L  L        + + N LA  +P   R+G  +E A      
Sbjct: 193 DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM-GRVGRAEEVAAAA--- 248

Query: 235 ITNPL---------INGEVIRIDG 249
               L         + G  + +DG
Sbjct: 249 ----LFLASDDSSFVTGAELFVDG 268

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  187 bits (477), Expect = 4e-59
 Identities = 61/268 (22%), Positives = 100/268 (37%), Gaps = 44/268 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +G V LVTG A G+G A V  +   G RV + D   +   +            P D+  
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL--------HLPGDLRE 77

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
                          G+LD+ VN AG+           G +   +  D+   L VN    
Sbjct: 78  AAYADGLPGAVAAGLGRLDIVVNNAGVISR--------GRITETTDADWSLSLGVNVEAP 129

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F + R +  L+           G I+N AS        G   Y  +K+ +  +T  M  D
Sbjct: 130 FRICRAAIPLMAAAG------GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMD 183

Query: 180 LAGAGIRVNTIAPGLFDTPLLSML-------NEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
            A  GIR+N + P   +TP+L           ++    L R++P   R+  P++ A +V 
Sbjct: 184 HAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPL-GRIAEPEDIADVVL 242

Query: 233 -------SIITNPLINGEVIRIDGALRM 253
                    +      G ++ ++G   +
Sbjct: 243 FLASDAARYLC-----GSLVEVNGGKAV 265

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  187 bits (477), Expect = 4e-59
 Identities = 69/262 (26%), Positives = 111/262 (42%), Gaps = 30/262 (11%)

Query: 1   MLKGVVGLVTGGA-SGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFA 55
           +LKG V LVT  A +G+G  T  R + EG  VV+ D           +L       V+  
Sbjct: 19  LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV 78

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DVTS E V   +    +  G+LDV VN AG+     + +       + +++ R+L V 
Sbjct: 79  VCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDM------TDEEWDRVLNVT 132

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
                   R  A L +          GVI+N AS+  +  Q  Q  Y+A+K+G++ +T  
Sbjct: 133 LTSVMRATR--AALRY---FRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRC 187

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ-- 232
            A +    G+R+N ++P +     L    + ++ + LA       R   P E A  +   
Sbjct: 188 SAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAF-GRAAEPWEVAATIAFL 246

Query: 233 -----SIITNPLINGEVIRIDG 249
                S +T     GEV+ +  
Sbjct: 247 ASDYSSYMT-----GEVVSVSS 263

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  186 bits (475), Expect = 5e-59
 Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 29/256 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG   G+G+ TV+ +   G RVV      ++ +S+ +E  P ++   VD+  
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE-CPGIEPVCVDLGD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E  ++A+     S G +D+ VN A ++              + + F R   VN      
Sbjct: 64  WEATERAL----GSVGPVDLLVNNAAVALLQPFLEV------TKEAFDRSFEVNLRAVIQ 113

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V+++ A+      L   G+ G I+N +S  +    +    Y ++K  +  +T  MA +L 
Sbjct: 114 VSQIVAR-----GLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG 168

Query: 182 GAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLV------QS 233
              IRVN + P +  T +      +      +   IP   +    +     +      +S
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL-GKFAEVEHVVNAILFLLSDRS 227

Query: 234 IITNPLINGEVIRIDG 249
                +  G  + ++G
Sbjct: 228 ----GMTTGSTLPVEG 239

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  186 bits (475), Expect = 6e-59
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 34/265 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L   V +VTG A+G+G+A      + G  VV+ DL +   E+VA  +   G        +
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN 69

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGIS--CAFKIFNYNKGTVHSLDDFKRILLVNT 116
           VT E+  +  +    D FGK+ V VN AG      F +          + DF+    +N 
Sbjct: 70  VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDM---------PMSDFEWAFKLNL 120

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              F +++L+A  + +         G I+N +S+A         +Y +SK+ +  +T  +
Sbjct: 121 FSLFRLSQLAAPHMQKAG------GGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNI 174

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           A D+   GIRVN IAPG   T  L ++L  ++   + +  P   RLG   + A       
Sbjct: 175 AFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL-GRLGEAQDIANAALFLC 233

Query: 233 ----SIITNPLINGEVIRIDGALRM 253
               + I+     G+V+ + G    
Sbjct: 234 SPAAAWIS-----GQVLTVSGGGVQ 253

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  185 bits (473), Expect = 9e-59
 Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 29/256 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             G+  LVTG   G+G+ TV+ +   G +VV      S+  S+AKE  P ++   VD+  
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE-CPGIEPVCVDLGD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            +  +KA+       G +D+ VN A +               + + F R   VN    F 
Sbjct: 64  WDATEKAL----GGIGPVDLLVNNAALVIMQPFLEV------TKEAFDRSFSVNLRSVFQ 113

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V+++ A+      +   G+ G I+N +S+ A+      + YS++K  +  +T  MA +L 
Sbjct: 114 VSQMVAR-----DMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 168

Query: 182 GAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLV------QS 233
              IRVN++ P +  T +   +  + +    L    P  ++    ++    +      +S
Sbjct: 169 PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL-RKFAEVEDVVNSILFLLSDRS 227

Query: 234 IITNPLINGEVIRIDG 249
                  +G  I +D 
Sbjct: 228 ----ASTSGGGILVDA 239

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  185 bits (471), Expect = 1e-58
 Identities = 64/266 (24%), Positives = 102/266 (38%), Gaps = 46/266 (17%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
                 LVTGG+ G+GKA VE +++     V+        +        ++KF   D+T 
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINI------DIQQSFSAENLKFIKADLTK 55

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           ++D+   + + K      D     AGI     IF+        ++  K++L +N   +  
Sbjct: 56  QQDITNVLDIIK--NVSFDGIFLNAGILIKGSIFDI------DIESIKKVLDLNVWSSIY 107

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     +             I+   S   +  +    AY+ SK  I  MT  +A DLA
Sbjct: 108 FIKGLENNLKVG--------ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLA 159

Query: 182 GAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDEFAQL 230
              IRVNT+ PG  DT L   L            ++ +    +  P   R+  P E A+L
Sbjct: 160 KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPL-NRIAQPQEIAEL 218

Query: 231 VQ-------SIITNPLINGEVIRIDG 249
           V          +T     G +I IDG
Sbjct: 219 VIFLLSDKSKFMT-----GGLIPIDG 239

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  185 bits (473), Expect = 2e-58
 Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 22/255 (8%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAP 56
             +G + LVTGG +G+G+   + +  EG  VV+        ++ A E+    G  V+   
Sbjct: 30  SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVV 89

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
            DV   + V       +  F +LD+ VN AG        N     +   + + +  I+  
Sbjct: 90  CDVGDPDQVAALFAAVRAEFARLDLLVNNAGS-------NVPPVPLEEVTFEQWNGIVAA 142

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N  G F   + + +++      +    G IIN  SI+A   +     Y+A+K  I G+T 
Sbjct: 143 NLTGAFLCTQHAFRMM----KAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTK 198

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
             A D     I    I  G   T + + ++  V       + A +     +  A+ V  +
Sbjct: 199 STALDGRMHDIACGQIDIGNAATDMTARMSTGVLQ-ANGEVAA-EPTIPIEHIAEAVVYM 256

Query: 235 ITNPL---INGEVIR 246
            + PL   +    + 
Sbjct: 257 ASLPLSANVLTMTVM 271

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  185 bits (471), Expect = 4e-58
 Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 37/266 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LKG   LVTGG+ G+G A VE +   G RV  C     E +   +     G +V+ +  D
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78

Query: 59  VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTV-HSLDDFKRILLVNT 116
           + S  +  K +      F GKL++ VN AG+         +K     +  D+  I+  N 
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGV-------VIHKEAKDFTEKDYNIIMGTNF 131

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              +++++++  L+  ++       G +I  +SIA +        YSASK  I  MT  +
Sbjct: 132 EAAYHLSQIAYPLLKASQ------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSL 185

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQL 230
           A + A   IRVN++APG+  TPL+          ++  +      P   R G P E + L
Sbjct: 186 ACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-GRAGKPQEVSAL 244

Query: 231 VQ-------SIITNPLINGEVIRIDG 249
           +        S IT     G++I  DG
Sbjct: 245 IAFLCFPAASYIT-----GQIIWADG 265

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  185 bits (472), Expect = 5e-58
 Identities = 62/266 (23%), Positives = 99/266 (37%), Gaps = 31/266 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
            +G V  +TGG +GLGK     +   G + V+        ++ A+++    G  V     
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNT 116
           DV   + VQ  V       G  ++ +N A         N+   T   S + +K I  +  
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAG-------NFISPTERLSPNAWKTITDIVL 136

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            GT  V           +L +       ++  +I A  G    V  +++K+G+  M+  +
Sbjct: 137 NGTAFVTLEIG-----KQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSL 191

Query: 177 ARDLAGAGIRVNTIAPGLFDTPL---LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ- 232
           A +    G+R N I PG   T                +   IP   RLG  +E A L   
Sbjct: 192 AAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC-GRLGTVEELANLAAF 250

Query: 233 --SIITNPL---INGEVIRIDGALRM 253
             S         ING VI+ DG   +
Sbjct: 251 LCS----DYASWINGAVIKFDGGEEV 272

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  184 bits (469), Expect = 6e-58
 Identities = 61/276 (22%), Positives = 98/276 (35%), Gaps = 42/276 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAP 56
           L   V +VTGG+SG+G ATVE ++  G  V  C        +    L     G  +  + 
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DV     V+     C+ + G   + VN AG                + + +   L +  
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAET------TDEAWSEELQLKF 119

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
               +  R     +             I+   S+ A + +   VA SA+++G+  +   M
Sbjct: 120 FSVIHPVRAFLPQLESRA------DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSM 173

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEK------------VRNFLARSIPAPQRLGHP 224
           A + A  G+RVN I  GL ++       E              +    + IP   RLG P
Sbjct: 174 AFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-GRLGKP 232

Query: 225 DEFAQLVQ-------SIITNPLINGEVIRIDGALRM 253
            E A+ +        +  T     G  I + G L  
Sbjct: 233 IEAARAILFLASPLSAYTT-----GSHIDVSGGLSR 263

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  183 bits (468), Expect = 1e-57
 Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 32/267 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAP 56
           +L+  V  +TGG SG+G    E  +R G   V+         + A++L    G       
Sbjct: 24  LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLS 83

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVN 115
           +DV +   V  AV      FG++D+ +NCA         N+       S + FK ++ ++
Sbjct: 84  MDVRAPPAVMAAVDQALKEFGRIDILINCAAG-------NFLCPAGALSFNAFKTVMDID 136

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
           T GTFNV+R+  +    +        GVI+N  +     GQ+ QV   ++K+ +  MT  
Sbjct: 137 TSGTFNVSRVLYEKFFRDH------GGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRH 190

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLS---MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
           +A +     IRVN++APG              +   +    + P  QRLG+  E A  V 
Sbjct: 191 LAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL-QRLGNKTEIAHSVL 249

Query: 233 ---SIITNPL---INGEVIRIDGALRM 253
              S    PL   + G V+  DG   +
Sbjct: 250 YLAS----PLASYVTGAVLVADGGAWL 272

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  182 bits (465), Expect = 2e-57
 Identities = 80/267 (29%), Positives = 124/267 (46%), Gaps = 34/267 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           L+G V ++TG ++GLGK+   R   E  +VV+      +   SV +E+   G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           DVT E DV   V      FGKLDV +N AG+         N  + H  SL D+ +++  N
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGL--------ENPVSSHEMSLSDWNKVIDTN 116

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G F  +R + +   EN      ++G +IN +S+         V Y+ASK G+  MT  
Sbjct: 117 LTGAFLGSREAIKYFVEN-----DIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTET 171

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ- 232
           +A + A  GIRVN I PG  +TP+ +    + + R  +   IP    +G P+E A +   
Sbjct: 172 LALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAAW 230

Query: 233 ------SIITNPLINGEVIRIDGALRM 253
                 S +T     G  +  DG + +
Sbjct: 231 LASSEASYVT-----GITLFADGGMTL 252

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  182 bits (464), Expect = 3e-57
 Identities = 62/261 (23%), Positives = 101/261 (38%), Gaps = 17/261 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           LKG   L+TG + G+G AT     R G +V L         +     +   G D  F   
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+ + E  Q+ V      FG +DV +N AG      +             +  ++  N  
Sbjct: 65  DLATSEACQQLVDEFVAKFGGIDVLINNAGG-----LVGRKPLPEIDDTFYDAVMDANIR 119

Query: 118 GTFNVARLSAQLIHENKLNEDGLR-GVIINTASIAAYEG-QSGQVAYSASKSGIVGMTLP 175
                 +    L H     +   +   +I+T SIA + G   G   Y A+K+ +  +   
Sbjct: 120 SVVMTTK--FALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKN 177

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
                   G+R N ++PG  DT   +   + VR+ ++  IP   R G  +E A       
Sbjct: 178 WVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPM-GRFGTAEEMAPAFLFFA 236

Query: 233 SIITNPLINGEVIRIDGALRM 253
           S + +  I G+V+ I+G    
Sbjct: 237 SHLASGYITGQVLDINGGQYK 257

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  182 bits (464), Expect = 3e-57
 Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 37/271 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
                 +VTGG  G+G A    +   G  V +     ++   V +++    G   K    
Sbjct: 12  FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 71

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV++ + V K +       G +   +  AG+S              + +DF  +  VN  
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATEL------THEDFAFVYDVNVF 125

Query: 118 GTFNVAR-LSAQLIHENKLNEDGLRGVIINTASIAA-------YEGQSGQVAYSASKSGI 169
           G FN  R ++   + + +      +G I+ T+S+++         G   QV Y++SK+  
Sbjct: 126 GVFNTCRAVAKLWLQKQQ------KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAAC 179

Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQ 229
             +   +A + A AGIRVN ++PG  +T   + +++K+R+  A +IP   R   P+E   
Sbjct: 180 SNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPL-NRFAQPEEMTG 238

Query: 230 LVQ-------SIITNPLINGEVIRIDGALRM 253
                     + +T     G    IDG   +
Sbjct: 239 QAILLLSDHATYMT-----GGEYFIDGGQLI 264

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  181 bits (461), Expect = 9e-57
 Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 24/250 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +  V ++TG + G+G   V        RVV          S+     PD+     D++ 
Sbjct: 26  NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR------SIKPSADPDIHTVAGDISK 79

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E   + V    + FG++D  VN AG+  A            + +D+   L VN  G F+
Sbjct: 80  PETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEM------TQEDYDHNLGVNVAGFFH 133

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV--AYSASKSGIVGMTLPMARD 179
           + + +A  + +         G I++  +    +   G      S +K G+  +T  +A +
Sbjct: 134 ITQRAAAEMLKQG------SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAME 187

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL 239
            + +G+RVN ++PG+  TP   M   +  + LA   P   R+G   +    V  +     
Sbjct: 188 FSRSGVRVNAVSPGVIKTP---MHPAETHSTLAGLHPV-GRMGEIRDVVDAVLYLEHAGF 243

Query: 240 INGEVIRIDG 249
           I GE++ +DG
Sbjct: 244 ITGEILHVDG 253

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  180 bits (459), Expect = 2e-56
 Identities = 70/262 (26%), Positives = 104/262 (39%), Gaps = 36/262 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +G   +V GG  G+G ATV R+V  G  V+L     S    + +E GP V     D+  
Sbjct: 6   YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIAD 65

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
             ++         + G +D+    AG+                 S   + R   VNT G 
Sbjct: 66  LNEIAVLGAAAGQTLGAIDLLHINAGV--------SELEPFDQVSEASYDRQFAVNTKGA 117

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F   +    LI E         G I+ T+S+A   G  G   YSASK+ +V     +A +
Sbjct: 118 FFTVQRLTPLIREG--------GSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAE 169

Query: 180 LAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQ- 232
           L   GIRVN+++PG  DTP   +         + +       P  +R G  DE A+ V  
Sbjct: 170 LLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM-KRNGTADEVARAVLF 228

Query: 233 -----SIITNPLINGEVIRIDG 249
                +  T     G  + +DG
Sbjct: 229 LAFEATFTT-----GAKLAVDG 245

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  181 bits (462), Expect = 2e-56
 Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 40/273 (14%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--------GPDV 52
           +L+G V +VTGGA+G+GKA V+ ++  G  VV+        +S A EL           V
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRI 111
                ++ +EE+V   V    D+FGK++  VN  G         +     H S   +  +
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG-------QFLSPAEHISSKGWHAV 127

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVG 171
           L  N  GTF + +       +         G I+N   +    G    V   A+++G+  
Sbjct: 128 LETNLTGTFYMCKAVYSSWMKEH------GGSIVNI-IVPTKAGFPLAVHSGAARAGVYN 180

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTP----LLSMLNEKVRNFLARSIPAPQRLGHPDEF 227
           +T  +A + A +GIR+N +APG+  +           +       + IPA +R+G P+E 
Sbjct: 181 LTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPEEV 239

Query: 228 AQLVQ-------SIITNPLINGEVIRIDGALRM 253
           + +V        S IT     G+ + +DG   +
Sbjct: 240 SSVVCFLLSPAASFIT-----GQSVDVDGGRSL 267

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  180 bits (458), Expect = 2e-56
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 38/269 (14%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG   G+GKA   R+V++G  V + D   +  ++VA E+   G       VDV+  
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           + V  AV   + + G  DV VN AG++ +  I +       + +   ++  +N  G    
Sbjct: 64  DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESI------TPEIVDKVYNINVKGVIWG 117

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            + + +        ++G  G IIN  S A + G      YS+SK  + G+T   ARDLA 
Sbjct: 118 IQAAVE-----AFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 172

Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNF-----------LARSIPAPQRLGHPDEFAQLV 231
            GI VN   PG+  TP+ + ++ +V               A+ I    RL  P++ A  V
Sbjct: 173 LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAACV 231

Query: 232 Q-------SIITNPLINGEVIRIDGALRM 253
                     +T     G+ + IDG +  
Sbjct: 232 SYLASPDSDYMT-----GQSLLIDGGMVF 255

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  179 bits (457), Expect = 4e-56
 Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 30/264 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LK    LVTGG  G+G A VE     G  +  C     E      +    G  V  +  D
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71

Query: 59  VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
            +   + +K +      FG KLD+ +N  G   +    +Y      + +DF   +  N  
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDY------TAEDFSFHISTNLE 125

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             +++++L+  L+  +        G II  +SIA     S    YSA+K  +  +   +A
Sbjct: 126 SAYHLSQLAHPLLKASG------CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179

Query: 178 RDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ---- 232
            + A  GIR N +AP +  TPL  ++ +++ +  +    P   R G P+E + LV     
Sbjct: 180 CEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL-GRFGEPEEVSSLVAFLCM 238

Query: 233 ---SIITNPLINGEVIRIDGALRM 253
              S IT     G+ I +DG L +
Sbjct: 239 PAASYIT-----GQTICVDGGLTV 257

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  180 bits (458), Expect = 4e-56
 Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 29/260 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LKG V  VTG + G+G A  E   + G  V +        E         G   K    +
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           ++  + V++ +   +  FG +DV V  AG++         +  V + D + +I+ V+  G
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVT----WTQGPEIDVDNYDSWNKIISVDLNG 147

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG--QVAYSASKSGIVGMTLPM 176
            +  +    ++  +N       +G +I T+SI+         Q  Y+ +K+    +   +
Sbjct: 148 VYYCSHNIGKIFKKNG------KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSL 201

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ---- 232
           A + A    RVNTI+PG  DT +    ++ ++    +  P   R G   E          
Sbjct: 202 AIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPL-GREGLTQELVGGYLYLAS 259

Query: 233 ---SIITNPLINGEVIRIDG 249
              +  T     G  + IDG
Sbjct: 260 NASTFTT-----GSDVVIDG 274

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  179 bits (457), Expect = 5e-56
 Identities = 74/260 (28%), Positives = 115/260 (44%), Gaps = 30/260 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G   L+TG ++G+GK         G +V +    +   + VA E+   G        D
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT  + V+  +       G +D+ V  AGI     + +        L++F+RI   N  G
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDM------PLEEFQRIQDTNVTG 143

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ--VAYSASKSGIVGMTLPM 176
            F  A+ +A+ + +      GL G II TAS++ +     Q    Y  SK+ +V +T  M
Sbjct: 144 VFLTAQAAARAMVDQ-----GLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAM 198

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ---- 232
           A +LA   IRVN+++PG   T L+  L +    +  + IP   R+G P+E   L      
Sbjct: 199 AVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPK-IPL-GRMGRPEELTGLYLYLAS 256

Query: 233 ---SIITNPLINGEVIRIDG 249
              S +T     G  I IDG
Sbjct: 257 AASSYMT-----GSDIVIDG 271

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  179 bits (456), Expect = 8e-56
 Identities = 67/277 (24%), Positives = 111/277 (40%), Gaps = 39/277 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFA 55
               V ++TG ++G+G+AT     REG +V +        E   +++        +V   
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DVT++    + +      FGKLD+ VN AG +          GT  S++ +   L +N
Sbjct: 64  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSK--TGTAQSIESYDATLNLN 121

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTL 174
                 + + +   +   K       G I+N +SIA+          YS +K+ I   T 
Sbjct: 122 LRSVIALTKKAVPHLSSTK-------GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTR 174

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLN---------EKVRNFLARSIPAPQRLGHPD 225
             A DL   GIRVN+I+PGL  T   S +                +   +PA   +G P 
Sbjct: 175 NTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQ 233

Query: 226 EFAQLVQ--------SIITNPLINGEVIRIDGALRMI 254
           + A+++         S I      G  + +DG   +I
Sbjct: 234 DIAEVIAFLADRKTSSYII-----GHQLVVDGGSSLI 265

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  177 bits (450), Expect = 3e-55
 Identities = 47/254 (18%), Positives = 87/254 (34%), Gaps = 36/254 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
                 LV GG+  LG   V+    +    +  D   +     +           +  + 
Sbjct: 20  HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS---------FTIKDSG 70

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           EE+++  +        K+D  V  AG             +   L   K ++ +N    F 
Sbjct: 71  EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNAS-----SDEFLKSVKGMIDMNLYSAFA 125

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            A + A+L+++         G+ + T + AA    SG +AY A+K+    +   +A +  
Sbjct: 126 SAHIGAKLLNQG--------GLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENG 177

Query: 182 GA--GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
           G   G     I P   DTP         R +++             E A+ +    TN  
Sbjct: 178 GLPAGSTSLGILPVTLDTPT-------NRKYMSD--ANFDDWTPLSEVAEKLFEWSTNSD 228

Query: 239 --LINGEVIRIDGA 250
               NG +++ +  
Sbjct: 229 SRPTNGSLVKFETK 242

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  176 bits (449), Expect = 4e-55
 Identities = 64/262 (24%), Positives = 106/262 (40%), Gaps = 29/262 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG A G+GKA   R+  +G  V++ D+     ++ A  +G   +    D++ 
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISD 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGI---SCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
              V+      +   G +D+ VN A I        +          LD +++I+ VN  G
Sbjct: 64  PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDV---------DLDHWRKIIDVNLTG 114

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
           TF V R     +        G  G +I+ AS   + G     AY A+K G++G T  +A 
Sbjct: 115 TFIVTRAGTDQMRAA-----GKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALAT 169

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ------ 232
           +L    I  N + PGL ++  +              + A +  G P+  A +V       
Sbjct: 170 ELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD 229

Query: 233 -SIITNPLINGEVIRIDGALRM 253
              IT     G+ + +D  +  
Sbjct: 230 ARWIT-----GQTLNVDAGMVR 246

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  176 bits (449), Expect = 5e-55
 Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 36/265 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G   LVTGG+ G+G   VE +   G  V  C     E      +    G  V+ +  D
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66

Query: 59  VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTV-HSLDDFKRILLVNT 116
           ++S  + Q+ +    + F GKL++ VN AGI          K    ++++D+  I+ +N 
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGI-------VIYKEAKDYTVEDYSLIMSINF 119

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              ++++ L+   +  ++      RG ++  +S++       +  Y A+K  +  +T  +
Sbjct: 120 EAAYHLSVLAHPFLKASE------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCL 173

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSML-----NEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           A + A   IRVN + PG+  T L+ M       ++  N L       +R+G P E A +V
Sbjct: 174 AFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-RRMGEPKELAAMV 232

Query: 232 Q-------SIITNPLINGEVIRIDG 249
                   S +T     G++I +DG
Sbjct: 233 AFLCFPAASYVT-----GQIIYVDG 252

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  176 bits (448), Expect = 6e-55
 Identities = 50/255 (19%), Positives = 90/255 (35%), Gaps = 26/255 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L     +      G+G  T   +V+   +  +         ++A+        ++ F   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 58  DVT-SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           DVT    + +K +    D    +D+ +N AGI                    +R + +N 
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------------DDHQIERTIAINF 108

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G  N          + K    G  G+I N  S+  +        YSASK+ +V  T  +
Sbjct: 109 TGLVNTTTAILDFWDKRK---GGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSL 165

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
           A+     G+   +I PG+  TPL+   N    V   +A  + +       ++  Q     
Sbjct: 166 AKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS-HPTQTSEQCGQNFVKA 224

Query: 235 ITNPLINGEVIRIDG 249
           I     NG + ++D 
Sbjct: 225 IEAN-KNGAIWKLDL 238

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  177 bits (451), Expect = 7e-55
 Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 31/272 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFA 55
             G   ++TG ++G+G++      +EG +V +        E   +++         +   
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DVT        +      FGK+D+ VN AG +    + +    T   ++ +++   +N
Sbjct: 84  VADVTEASGQDDIINTTLAKFGKIDILVNNAGAN----LADGTANTDQPVELYQKTFKLN 139

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTL 174
                 + + + + + + K       G I+N +SI A  +  SG   Y+ +K+ +   T 
Sbjct: 140 FQAVIEMTQKTKEHLIKTK-------GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTR 192

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLAR---SIPAPQRLGHPD 225
             A DL   G+RVN+++PG   T  +  +       +K+ +F+      IP     G P+
Sbjct: 193 CTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPE 251

Query: 226 EFAQLVQ---SIITNPLINGEVIRIDGALRMI 254
           E A ++        +  I G+ I  DG   ++
Sbjct: 252 EIANIIVFLADRNLSSYIIGQSIVADGGSTLV 283

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  176 bits (449), Expect = 9e-55
 Identities = 65/272 (23%), Positives = 114/272 (41%), Gaps = 29/272 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFA 55
                 ++TG ++G+G+ T     +EG  V +    +   E   + +         V   
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DVT+E+   + +      FGK+DV VN AG +          GT   +D + + L +N
Sbjct: 64  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGT--TGTDQGIDIYHKTLKLN 121

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTL 174
                 + +     +  +K       G I+N +SI A  + Q   + Y+ +K+ +   T 
Sbjct: 122 LQAVIEMTKKVKPHLVASK-------GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTR 174

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLAR---SIPAPQRLGHPD 225
             A DLA  GIRVN+++PG+ +T   + +       +K  NF+A     IP     G P+
Sbjct: 175 STAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPE 233

Query: 226 EFAQLVQ---SIITNPLINGEVIRIDGALRMI 254
             A ++        +  I G+ I  DG   ++
Sbjct: 234 HIANIILFLADRNLSFYILGQSIVADGGTSLV 265

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  175 bits (447), Expect = 1e-54
 Identities = 66/264 (25%), Positives = 105/264 (39%), Gaps = 35/264 (13%)

Query: 2   LKGVVGLVTG--GASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL----GPDVKF 54
           LKG V +VTG  G  G+G          G  V +     ++G E   KEL    G   K 
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77

Query: 55  APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
               V S E  +K V      FG++D  +  AG +    I +       S++ +  ++ V
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDG------SVEAWNHVVQV 131

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--QSGQVAYSASKSGIVGM 172
           +  GTF+ A+       E         G ++ TAS++ +       Q +Y+ +K+G + M
Sbjct: 132 DLNGTFHCAKAVGHHFKERG------TGSLVITASMSGHIANFPQEQTSYNVAKAGCIHM 185

Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
              +A +      RVN+I+PG  DT L   + ++ +      IP   R G   E      
Sbjct: 186 ARSLANEWRD-FARVNSISPGYIDTGLSDFVPKETQQLWHSMIPM-GRDGLAKELKGAYV 243

Query: 233 -------SIITNPLINGEVIRIDG 249
                  +  T     G  + IDG
Sbjct: 244 YFASDASTYTT-----GADLLIDG 262

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  174 bits (444), Expect = 3e-54
 Identities = 56/273 (20%), Positives = 105/273 (38%), Gaps = 43/273 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAP 56
           M +    LVTG + G+GKA   R+   G  +V+    + +     A+E+   G  V    
Sbjct: 1   MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK 60

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKR 110
            +V     +++      ++FG+LDV VN A               V           +  
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS------------GVLRPVMELEETHWDW 108

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
            + +N       A+ +A+L+ +N        G I++ +S+ +            SK+ + 
Sbjct: 109 TMNINAKALLFCAQEAAKLMEKNG------GGHIVSISSLGSIRYLENYTTVGVSKAALE 162

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFA 228
            +T  +A +L+   I VN ++ G  DT  L      E +     ++ PA  R+    +  
Sbjct: 163 ALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA-GRMVEIKDMV 221

Query: 229 QLVQ-------SIITNPLINGEVIRIDGALRMI 254
             V+        +I      G+ I +DG   ++
Sbjct: 222 DTVEFLVSSKADMIR-----GQTIIVDGGRSLL 249

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  174 bits (444), Expect = 3e-54
 Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 40/271 (14%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE--GESVAKEL---GPDVKFAPVDVT 60
           V +VTGGA G+G+   E++  +G  + + DLP  E       K +        F  +DVT
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
            + +   A+    +  G  DV VN AGI+    +         + +D K+I  VN    F
Sbjct: 64  DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEV------TEEDLKQIYSVNVFSVF 117

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
              + +++     K +E G++G IIN ASIAA +G     AYS +K  + G+T   A++L
Sbjct: 118 FGIQAASR-----KFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQEL 172

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNF-----------LARSIPAPQRLGHPDEFAQ 229
           A  G  VN  APG+  T +   ++ ++               + SI    R   P++ A 
Sbjct: 173 APKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIAL-GRPSVPEDVAG 231

Query: 230 LVQ-------SIITNPLINGEVIRIDGALRM 253
           LV        + +T     G+V+ +DG +  
Sbjct: 232 LVSFLASENSNYVT-----GQVMLVDGGMLY 257

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  173 bits (442), Expect = 4e-54
 Identities = 46/256 (17%), Positives = 89/256 (34%), Gaps = 30/256 (11%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           + LVT      G A VE + ++G  VV  D   ++    A+    + +       +E+  
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADA---AERQRFESENPGTIALAEQKP 59

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
           ++ V         +D  V+   I    +  N       S  D +++    ++    + + 
Sbjct: 60  ERLVDATLQHGEAIDTIVSNDYIP---RPMNRLPLEGTSEADIRQMFEALSIFPILLLQS 116

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
           +   +             +I   S    +  +    Y  +++  V +    A+ L+  GI
Sbjct: 117 AIAPLRAAG------GASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGI 170

Query: 186 RVNTIAPGLFDTPLLSML-----NEKVRNFLARSIPAPQRLGHPDEFAQLVQ-------S 233
            +  I P  F+ P          N ++R  + R +P   RLG PDE   L+        +
Sbjct: 171 LLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL-GRLGRPDEMGALITFLASRRAA 229

Query: 234 IITNPLINGEVIRIDG 249
            I      G+     G
Sbjct: 230 PIV-----GQFFAFTG 240

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  174 bits (443), Expect = 5e-54
 Identities = 62/271 (22%), Positives = 100/271 (36%), Gaps = 41/271 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           + G V ++TG +SG+G A  E   +EG  +VL           A+ L    G  V    V
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV + E V   V   + SFG  D+ VN AG      I         + + ++    +  +
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEA------ADEKWQFYWELLVM 118

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
               +AR     +           G II+ ASI A +    +  Y+ +K+ ++  +  +A
Sbjct: 119 AAVRLARGLVPGMRARG------GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLA 172

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML------------NEKVRNFLARSIPAPQRLGHPD 225
            ++    IRVN I PGL  TP                    +++      P  +R   P+
Sbjct: 173 TEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI-KRFASPE 231

Query: 226 EFAQLVQ-------SIITNPLINGEVIRIDG 249
           E A           +        G    +DG
Sbjct: 232 ELANFFVFLCSERATYSV-----GSAYFVDG 257

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  173 bits (442), Expect = 1e-53
 Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 21/262 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
               V +VTGG  G+G      +   G  + +  +  +EG   V  EL   G  V F   
Sbjct: 27  KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRA 86

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           D+      Q  V      FG++D  VN AGI+      +  +        ++F  I+ VN
Sbjct: 87  DLADLSSHQATVDAVVAEFGRIDCLVNNAGIA------SIVRDDFLDLKPENFDTIVGVN 140

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             GT    +   + +  +          IIN  S++A      ++ Y  SK+G+   +  
Sbjct: 141 LRGTVFFTQAVLKAMLASDARA---SRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQG 197

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN-FLARSIPAPQRLGHPDEFAQLVQSI 234
           +A  LA  GI V  + PG+  + + + ++ K      +  +P  +R G P++   +V + 
Sbjct: 198 LALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPM-RRWGEPEDIGNIV-AG 255

Query: 235 ITNPL---INGEVIRIDGALRM 253
           +         G VI+ DG L +
Sbjct: 256 LAGGQFGFATGSVIQADGGLSI 277

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  171 bits (436), Expect = 3e-53
 Identities = 65/271 (23%), Positives = 98/271 (36%), Gaps = 46/271 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             G    VTG   G+G AT    V  G +V   D           +         +DV  
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ-------AFTQEQYPFATEVMDVAD 57

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
              V +          +LD  VN AGI           G     S +D+++   VN  G 
Sbjct: 58  AAQVAQVCQRLLAETERLDALVNAAGILRM--------GATDQLSKEDWQQTFAVNVGGA 109

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           FN+ + +       +       G I+  AS AA+  + G  AY ASK+ +  + L +  +
Sbjct: 110 FNLFQQTMNQFRRQR------GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLE 163

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEK----------VRNFLARSIPAPQRLGHPDEFAQ 229
           LAG+G+R N ++PG  DT +   L                     IP   ++  P E A 
Sbjct: 164 LAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPL-GKIARPQEIAN 222

Query: 230 LVQ-------SIITNPLINGEVIRIDGALRM 253
            +        S IT      + I +DG   +
Sbjct: 223 TILFLASDLASHIT-----LQDIVVDGGSTL 248

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  171 bits (435), Expect = 3e-53
 Identities = 54/257 (21%), Positives = 94/257 (36%), Gaps = 30/257 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +     +VTG  SGLG+A    +V  G +V +        +     LG  V     D+  
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAH 60

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
            EDV  A     +  G  ++ ++CAG            G V   + +  +R++  N V T
Sbjct: 61  HEDVDVAFAAAVEWGGLPELVLHCAGTGEF--------GPVGVYTAEQIRRVMESNLVST 112

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
             VA+ + +LI E         GV+ N  S AA  G++ +  Y ASK G+ G    +  +
Sbjct: 113 ILVAQQTVRLIGER-------GGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAE 165

Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
           L  + +R+  + P    +      +             P     P++ A  +   +    
Sbjct: 166 LKDSPLRLVNLYPSGIRSEFWDNTDH----------VDPSGFMTPEDAAAYMLDALEARS 215

Query: 239 --LINGEVIRIDGALRM 253
              +    I  +     
Sbjct: 216 SCHVTDLFIGRNEGHHH 232

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  168 bits (429), Expect = 3e-52
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 34/262 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           LK    L+TG A G+G+AT+E   +EG R+V CD+        A+ +G       +DV  
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVAD 60

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGI---SCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
              V++         G+LD  V+ AGI   +  +K+          L+D++ +L VN  G
Sbjct: 61  PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKM---------PLEDWELVLRVNLTG 111

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
           +F VA+ +++ + E         G I+ TAS     G  GQ  Y+AS +G+VG+T  +A 
Sbjct: 112 SFLVAKAASEAMREKN------PGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRTLAL 164

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ------ 232
           +L   GIRVNT+APG  +T + + + EKVR     + P   R G P E A          
Sbjct: 165 ELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDE 223

Query: 233 -SIITNPLINGEVIRIDGALRM 253
            S IT     G+V+ +DG   +
Sbjct: 224 SSFIT-----GQVLFVDGGRTI 240

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  170 bits (432), Expect = 4e-52
 Identities = 71/277 (25%), Positives = 105/277 (37%), Gaps = 43/277 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
           M +     VTG +SG+G A    +   G  V  C        +    L   G DV  +  
Sbjct: 21  MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSC 80

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGIS---CAFKIFNYNKGTVHSLDDFKRILLV 114
           DVTS ++V  AV    + FG + + VN AG +       +             +  +L  
Sbjct: 81  DVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADL---------DDALWADVLDT 131

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N  G F V R   +     +       G I+N AS    +G      Y+ASK G+VG T 
Sbjct: 132 NLTGVFRVTREVLRAGGMREAG----WGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTK 187

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLL-----------SMLNEKVRNFLARSIPAPQRLGH 223
            +  +LA  GI VN + PG  +TP+             +  ++V       IP   R   
Sbjct: 188 SVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-GRYST 246

Query: 224 PDEFAQLVQ-------SIITNPLINGEVIRIDGALRM 253
           P+E A LV        + IT      + + + G L  
Sbjct: 247 PEEVAGLVGYLVTDAAASIT-----AQALNVCGGLGN 278

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  168 bits (428), Expect = 7e-52
 Identities = 60/259 (23%), Positives = 99/259 (38%), Gaps = 29/259 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVT 60
           L G    VTG  SG+G          G R++L D   +  +  A+EL          DVT
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVT 68

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
             E +  A     ++   + + VN AGI+                  +++++ VN  G F
Sbjct: 69  DAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALE------TDDATWRQVMAVNVDGMF 121

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ--VAYSASKSGIVGMTLPMAR 178
             +R   + +           G I+N  S++       Q   +Y ASK  +  +T  +A 
Sbjct: 122 WASRAFGRAMVARG------AGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAA 175

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLV----- 231
           + AG G+RVN +APG   T +   +    ++        P   R G P E A        
Sbjct: 176 EWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM-GRCGEPSEIAAAALFLAS 234

Query: 232 -QSIITNPLINGEVIRIDG 249
             +      + G ++ +DG
Sbjct: 235 PAA----SYVTGAILAVDG 249

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  168 bits (428), Expect = 7e-52
 Identities = 67/264 (25%), Positives = 100/264 (37%), Gaps = 30/264 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L+G   +VTGG  G+G+       R G  V +    T++ ++   +L       V     
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV+             + FG +DV    AG+      F        + +    I  VN  
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGV------FPDAPLATMTPEQLNGIFAVNVN 121

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASI-AAYEGQSGQVAYSASKSGIVGMTLPM 176
           GTF   +     +  +        G ++ T+SI     G  G   Y A+K+  +G     
Sbjct: 122 GTFYAVQACLDALIASG------SGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTA 175

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ---- 232
           A +LA   I VN I PG   T  L    E+    +ARSIPA   LG P++   L      
Sbjct: 176 AIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPA-GALGTPEDIGHLAAFLAT 234

Query: 233 ---SIITNPLINGEVIRIDGALRM 253
                IT     G+ I +DG   +
Sbjct: 235 KEAGYIT-----GQAIAVDGGQVL 253

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  168 bits (428), Expect = 7e-52
 Identities = 46/253 (18%), Positives = 91/253 (35%), Gaps = 21/253 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFA-PVDVT 60
           L     L+TG +  +G     R++  G RV++         +   EL      A   D +
Sbjct: 25  LSSAPILITGASQRVGLHCALRLLEHGHRVIISY---RTEHASVTELRQAGAVALYGDFS 81

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
            E  +   + L K     L   V+ A            +      D+F R+  V+ +  +
Sbjct: 82  CETGIMAFIDLLKTQTSSLRAVVHNASE-------WLAETPGEEADNFTRMFSVHMLAPY 134

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
            +      L+  ++         I++ +     +G S  +AY A+K+G+  +TL  A   
Sbjct: 135 LINLHCEPLLTASE------VADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARF 188

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
           A   ++VN IAP L         +   R                +   Q ++ ++ +  +
Sbjct: 189 A-PLVKVNGIAPALLMFQPKD--DAAYRANALAKSAL-GIEPGAEVIYQSLRYLLDSTYV 244

Query: 241 NGEVIRIDGALRM 253
            G  + ++G   +
Sbjct: 245 TGTTLTVNGGRHV 257

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  168 bits (429), Expect = 1e-51
 Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 32/268 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL----GPDVKFA 55
            +     ++TG  SG+G A    + + G  +VL      +   +V  E+       V   
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
           P D+T   ++   + +  D FG  D+ VN AG+    KI ++       ++ + RI+ VN
Sbjct: 82  PADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDF------PVEQWDRIIAVN 135

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
              +F+  R +   + +         G IIN AS         + AY A+K GI+G+T  
Sbjct: 136 LSSSFHTIRGAIPPMKKKG------WGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKT 189

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSML------------NEKVRNFLARSIPAPQRLGH 223
           +A ++A +G+ VN+I PG   TPL+                + +   + +  P  ++   
Sbjct: 190 VALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT-KKFIT 248

Query: 224 PDEFAQLVQSIITNP--LINGEVIRIDG 249
            ++ A L   +  +    I G  + +DG
Sbjct: 249 VEQVASLALYLAGDDAAQITGTHVSMDG 276

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  168 bits (429), Expect = 1e-51
 Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 27/273 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL----GPDVKFAP 56
           ++    +VTG A  +G+A   ++ + G RVV+    ++E   S+A EL            
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80

Query: 57  VDVTSEE----DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNY----NKGTVHSLDDF 108
            D+T+        ++ +  C  +FG+ DV VN A       +       N          
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140

Query: 109 KRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSG 168
             ++  N +  F +    AQ       N       I+N       +       Y+  K  
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 200

Query: 169 IVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           +VG+T   A +LA  GIRVN +APG+   P    + E+ ++   R +P  +R    ++ A
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAPGVSLLP--VAMGEEEKDKWRRKVPLGRREASAEQIA 258

Query: 229 QLVQ-------SIITNPLINGEVIRIDGALRMI 254
             V          IT     G +I++DG L ++
Sbjct: 259 DAVIFLVSGSAQYIT-----GSIIKVDGGLSLV 286

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  167 bits (425), Expect = 2e-51
 Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 35/263 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G   LVTG A GLG A  E +   G RV+L D+  +        L   G D      D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VT E  ++ A          +D+ +N AGI     +          L+++++++  N   
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVE------LELENWQKVIDTNLTS 120

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F V+R +A+     ++      G IIN  S+ +   +     Y+A+K GI  +T  MA 
Sbjct: 121 AFLVSRSAAK-----RMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAA 175

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           + A   I+ N I PG   T + + L  +++  +++  S P+ QR G P+E          
Sbjct: 176 EWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPS-QRWGRPEELI-------- 226

Query: 237 NPL----------INGEVIRIDG 249
                        ING++I +DG
Sbjct: 227 GTAIFLSSKASDYINGQIIYVDG 249

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  167 bits (424), Expect = 3e-51
 Identities = 46/261 (17%), Positives = 103/261 (39%), Gaps = 27/261 (10%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG--ESVAKELGPDVKFAPVDVTS 61
           G V LVTG + G+GK+ V+ +       V+  +  SE   + + ++ G    +   D+T 
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           +  +++ V       GK+D  V  AG+    +  N        ++ +K++  +N     +
Sbjct: 62  DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVN-----EIDVNAWKKLYDINFFSIVS 116

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +  ++   + +         G ++  +S A     S   AY +SK+ +    + +A +  
Sbjct: 117 LVGIALPELKKTN-------GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-- 167

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ--------RLGHPDEFAQLVQS 233
              ++   +APG+ DT +   + E V      +             +L      A +   
Sbjct: 168 ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAK 227

Query: 234 IITNPL---INGEVIRIDGAL 251
           +  + +   +NG+ +  +   
Sbjct: 228 LALHGIPDGVNGQYLSYNDPA 248

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  167 bits (425), Expect = 3e-51
 Identities = 80/277 (28%), Positives = 121/277 (43%), Gaps = 47/277 (16%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----------GP 50
            L+  + LVTG  SG+G+A   R+  EG  V  CDL  +  +   + L            
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63

Query: 51  DVKFAPVDVTSEEDVQKAVLLCKDSFGK-LDVNVNCAGISCAFKIFNYNKGTVHSL---- 105
           +      DV+     +  +   +  F +   V V+CAGI            T        
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI------------TQDEFLLHM 111

Query: 106 --DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS 163
             DD+ +++ VN  GTF V + +AQ +  N        G IIN +SI    G  GQ  Y+
Sbjct: 112 SEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCR-----GSIINISSIVGKVGNVGQTNYA 166

Query: 164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGH 223
           ASK+G++G+T   AR+L   GIR N++ PG   TP+   + +KV + +   IP    LG 
Sbjct: 167 ASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPM-GHLGD 225

Query: 224 PDEFAQLVQ-------SIITNPLINGEVIRIDGALRM 253
           P++ A +V          IT     G  + + G L M
Sbjct: 226 PEDVADVVAFLASEDSGYIT-----GTSVEVTGGLFM 257

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  166 bits (424), Expect = 3e-51
 Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 33/263 (12%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
             +VT      G  +  R+   G  V   D    + + +         +  +   SE++ 
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---TYPQLKPMSEQEP 59

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
            + +     ++G++DV V+    +  F+         ++++D++  +    +  F +   
Sbjct: 60  AELIEAVTSAYGQVDVLVSNDIFAPEFQPI-----DKYAVEDYRGAVEALQIRPFALVNA 114

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
            A  + + K       G II   S   +        Y+++++G   +   ++++L    I
Sbjct: 115 VASQMKKRK------SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNI 168

Query: 186 RVNTIAPGLFDTPLLSML--------NEKVRNFLARSIPAPQRLGHPDEFAQLV------ 231
            V  I P    +              N +    + +     QRLG   E  +LV      
Sbjct: 169 PVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL-QRLGTQKELGELVAFLASG 227

Query: 232 QSIITNPLINGEVIRIDGALRMI 254
                   + G+V  + G   MI
Sbjct: 228 SC----DYLTGQVFWLAGGFPMI 246

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  168 bits (427), Expect = 3e-51
 Identities = 61/242 (25%), Positives = 96/242 (39%), Gaps = 23/242 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
             G   +VTGGASG+G AT     R G R+VL D+     E     L   G D      D
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V   +++ +         G +DV  + AGI  A  +         + DD++ ++ ++  G
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQ------MNHDDWRWVIDIDLWG 142

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
           + +        + E      G  G I  TAS A     +G   Y  +K G+VG+   +AR
Sbjct: 143 SIHAVEAFLPRLLEQ-----GTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAR 197

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGH---------PDEFAQ 229
           ++   GI V+ + P + +T L+S            S       G           D+ A+
Sbjct: 198 EVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVAR 257

Query: 230 LV 231
           L 
Sbjct: 258 LT 259

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  167 bits (425), Expect = 3e-51
 Identities = 63/281 (22%), Positives = 108/281 (38%), Gaps = 50/281 (17%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---------------- 45
           L+G V  +TG A G G+A   R+  EG  ++  D+       V                 
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 46  KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
           +     +  A VD    + ++K V     + G+LD+ V  AG++              + 
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA------APQAWDDITP 122

Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
           +DF+ ++ +N  GT+N     A      ++ E G  G II  +S A  + Q   + Y+AS
Sbjct: 123 EDFRDVMDINVTGTWNTVMAGAP-----RIIEGGRGGSIILISSAAGMKMQPFMIHYTAS 177

Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL----------SMLNEKVRNFLARSI 215
           K  + G+    A +L    IRVN++ PG  +TP+           +M      + +    
Sbjct: 178 KHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF 237

Query: 216 PAPQRLGHPDEFAQLVQ-------SIITNPLINGEVIRIDG 249
             P  +  P++ A  V          +T        I +D 
Sbjct: 238 L-PDWVAEPEDIADTVCWLASDESRKVT-----AAQIPVDQ 272

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  167 bits (425), Expect = 4e-51
 Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---------------- 45
           L+G V  +TG A G G++   R+  EG  ++ CD+      SV                 
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72

Query: 46  KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
           ++ G       +DV  +  +++ V    + FG+LDV V  AG+       ++ +    + 
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL------SWGRVWELTD 126

Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
           + +  ++ VN  GT+   R  A +     + E G  G I+  +S A  +   G   YSAS
Sbjct: 127 EQWDTVIGVNLTGTWRTLR--ATVPA---MIEAGNGGSIVVVSSSAGLKATPGNGHYSAS 181

Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---------EKVRNFLARSIP 216
           K G+  +T  +A +L   GIRVN+I P   +TP++               V +F    + 
Sbjct: 182 KHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQ 241

Query: 217 APQRLGHPDEFAQLVQ-------SIITNPLINGEVIRIDG 249
            P      DE A +V          +T     G  I +D 
Sbjct: 242 -PNGFMTADEVADVVAWLAGDGSGTLT-----GTQIPVDK 275

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  166 bits (422), Expect = 5e-51
 Identities = 54/263 (20%), Positives = 99/263 (37%), Gaps = 41/263 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAP 56
           +L   + LVTG + G+G+       R G  V+L      +   VA  +    G   ++  
Sbjct: 9   LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFI 68

Query: 57  VD--VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
           +D    + E+ Q+       ++ +LD  ++ AG+            +  +   ++ ++ V
Sbjct: 69  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPM-----SEQNPQVWQDVMQV 123

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N   TF + +    L+ ++        G ++ T+S    +G++   AY+ASK    GM  
Sbjct: 124 NVNATFMLTQALLPLLLKSD------AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQ 177

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA--PQRLGHPDEFAQLV- 231
            +A +     +RVN I PG   T +            A + P   PQ+L  P +   L  
Sbjct: 178 VLADEYQ-QRLRVNCINPGGTRTAM-----------RASAFPTEDPQKLKTPADIMPLYL 225

Query: 232 -----QSIITNPLINGEVIRIDG 249
                 S        G       
Sbjct: 226 WLMGDDSR----RKTGMTFDAQP 244

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  166 bits (424), Expect = 5e-51
 Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 26/264 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDV 59
           L G + LVTGG+ G+G+   + ++  G RV +C          A  L    D +  P D+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           +SE   ++      +   +LD+ VN AG S             + +  +++++ +N    
Sbjct: 87  SSEAGARRLAQALGELSARLDILVNNAGTS------WGAALESYPVSGWEKVMQLNVTSV 140

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMTLPMAR 178
           F+  +    L+  +   E+     +IN  S+A       Q  AY  SK+ +  ++  +A+
Sbjct: 141 FSCIQQLLPLLRRSASAEN--PARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAK 198

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           +L G  I VN IAPG F + +   +  + +     + SIP   R G P+E A L  S   
Sbjct: 199 ELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPM-GRWGRPEEMAALAIS--- 254

Query: 237 NPL-------INGEVIRIDGALRM 253
             L       + G VI IDG   +
Sbjct: 255 --LAGTAGAYMTGNVIPIDGGFHL 276

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  167 bits (424), Expect = 6e-51
 Identities = 74/270 (27%), Positives = 101/270 (37%), Gaps = 42/270 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L     LVTGG  G+G+       R G  V +      E  SV  EL      +V    +
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRI 111
           DV+       A     D+FG LDV    AGI               +       +    +
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCANAGI------------FPEARLDTMTPEQLSEV 146

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI-AAYEGQSGQVAYSASKSGIV 170
           L VN  GT    +     +  +       RG +I T+SI     G  G   Y ASK+  +
Sbjct: 147 LDVNVKGTVYTVQACLAPLTASG------RGRVILTSSITGPVTGYPGWSHYGASKAAQL 200

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
           G     A +LA  G+ VN I PG   T  L  + E+  + +ARSIP    LG P +   L
Sbjct: 201 GFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPM-GMLGSPVDIGHL 259

Query: 231 VQ-------SIITNPLINGEVIRIDGALRM 253
                      IT     G+ I +DG   +
Sbjct: 260 AAFLATDEAGYIT-----GQAIVVDGGQVL 284

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  166 bits (422), Expect = 6e-51
 Identities = 67/268 (25%), Positives = 107/268 (39%), Gaps = 32/268 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-----ESVAKELGPDVKFA 55
           MLKG V +VTG  SG+G      +  +G  +VL     +         +A + G  V + 
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D++  E V+  V       G++D+ VN AGI     I ++        + +  IL +N
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF------PTEKWDAILALN 114

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F+    +   + +         G IIN AS       + + AY A+K G+VG T  
Sbjct: 115 LSAVFHGTAAALPHMKKQG------FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKV 168

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSML------------NEKVRNFLARSIPAPQRLGH 223
            A + AG GI  N I PG   TPL+                   R  L+   P+  +   
Sbjct: 169 TALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVT 227

Query: 224 PDEFAQLVQSIITNP--LINGEVIRIDG 249
           P++       + ++    I G  + +DG
Sbjct: 228 PEQLGGTAVFLASDAAAQITGTTVSVDG 255

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  165 bits (421), Expect = 7e-51
 Identities = 80/266 (30%), Positives = 133/266 (50%), Gaps = 37/266 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTG + G+GKA  E +   G +V+      S  ++++  LG + K   ++VT+
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 66

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRILLVN 115
            E ++  +    D FG +D+ VN AGI            T  +L      +++  I+  N
Sbjct: 67  PESIEAVLKAITDEFGGVDILVNNAGI------------TRDNLLMRMKEEEWSDIMETN 114

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F +++   + + + +      +G IIN  S+    G +GQ  Y+A+K+G++G T  
Sbjct: 115 LTSIFRLSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKS 168

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           MAR++A  G+ VNT+APG  +T +   LN++ R      +PA  RLG P E A  V    
Sbjct: 169 MAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPA-GRLGDPREIASAVAFLA 227

Query: 233 ----SIITNPLINGEVIRIDGALRMI 254
               + IT     GE + ++G + MI
Sbjct: 228 SPEAAYIT-----GETLHVNGGMYMI 248

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  165 bits (420), Expect = 9e-51
 Identities = 51/257 (19%), Positives = 103/257 (40%), Gaps = 31/257 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFA 55
            +  + ++TG + G+G      +  +G RVVL        E V  E+        +    
Sbjct: 5   KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
           P+D+T        +      +G +D+ VN A +         +      +D+F++I+ +N
Sbjct: 65  PLDITDCTKADTEIKDIHQKYGAVDILVNAAAM-------FMDGSLSEPVDNFRKIMEIN 117

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
            +  + + +   +++   K       G I N AS AA  G +    Y ++K  ++G+   
Sbjct: 118 VIAQYGILKTVTEIMKVQK------NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAES 171

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           + R+LA  GIRV T+ PG  +T +        ++         + +  PD+    ++ ++
Sbjct: 172 LYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFKD---------EEMIQPDDLLNTIRCLL 222

Query: 236 TNP---LINGEVIRIDG 249
                  I   V  +  
Sbjct: 223 NLSENVCIKDIVFEMKK 239

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  165 bits (421), Expect = 1e-50
 Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 29/266 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG----ESVAKELGPDVKFAPV 57
                 L+T G  GLGK   E+++ +G  V +     +      +   K++   ++F   
Sbjct: 5   RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA 64

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DVT +ED+ K V      FGK+D  +N AG      +F   K   +  D++  ++  N  
Sbjct: 65  DVTKKEDLHKIVEEAMSHFGKIDFLINNAGPY----VFERKKLVDYEEDEWNEMIQGNLT 120

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTA--SIAAYEGQSGQVAYSASKSGIVGMTLP 175
             F++ +L   ++ +         G IIN       +  G   + A++A+K G+V +T  
Sbjct: 121 AVFHLLKLVVPVMRKQN------FGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKT 174

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           +A + A  GI  N + PG     +     ++ R     + P   R G  ++ A+ +    
Sbjct: 175 VAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPI-GRSGTGEDIARTISFLC 233

Query: 233 ----SIITNPLINGEVIRIDGALRMI 254
                +IT     G +I + GA+ +I
Sbjct: 234 EDDSDMIT-----GTIIEVTGAVDVI 254

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  165 bits (420), Expect = 1e-50
 Identities = 66/267 (24%), Positives = 107/267 (40%), Gaps = 37/267 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKELGPDVKFAPVDVT 60
           LKG   LVTG  SG+G    + + R G  +VL      +   +     G      P D++
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
               ++    L +  FG +D+ VN AGI     +  +       L+ + +I+ +N    F
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQF------PLESWDKIIALNLSAVF 115

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           +  RL+   +           G IIN AS+    G +G+ AY A+K G+VG+T  +  + 
Sbjct: 116 HGTRLALPGMRARN------WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLET 169

Query: 181 AGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDEFAQ 229
           A + +  N I PG   TPL+               +   + LA   P+      P+   +
Sbjct: 170 ATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPS-LAFVTPEHLGE 228

Query: 230 LVQ-------SIITNPLINGEVIRIDG 249
           LV        S +      G    +DG
Sbjct: 229 LVLFLCSEAGSQVR-----GAAWNVDG 250

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  165 bits (420), Expect = 1e-50
 Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 37/266 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG   G+G+A       +G  V L      + + +A +LG DV     +++ 
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSD 84

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRILLVN 115
            + +++   + +     +D+ VN AGI            T   L       D+  +L VN
Sbjct: 85  RKSIKQLAEVAEREMEGIDILVNNAGI------------TRDGLFVRMQDQDWDDVLAVN 132

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
                 + R     +   +       G IIN  SI    G  GQ  Y A+K+G++G +  
Sbjct: 133 LTAASTLTRELIHSMMRRR------YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKA 186

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           +A+++A   I VN IAPG   + +   LNEK +  +   IP  +R+G  +E A       
Sbjct: 187 LAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPM-KRMGIGEEIAFATVYLA 245

Query: 233 ----SIITNPLINGEVIRIDGALRMI 254
               + +T     G+ + I+G + MI
Sbjct: 246 SDEAAYLT-----GQTLHINGGMAMI 266

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  165 bits (419), Expect = 2e-50
 Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 25/249 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G V +VTG + G+G A   ++   G RVVL      +  +V +E+   G + +    D
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           ++  + +         + G+ DV VN AG+       +  K       ++  ++ VN   
Sbjct: 87  LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMK-----PAEWDALIAVNLKA 141

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            + + R  A  +   K      RG IIN +S+A     +   AY+ASK G+ G+    A 
Sbjct: 142 PYLLLRAFAPAMIAAK------RGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAE 195

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
           +L    +RV+ +APG   T     L+ K          +      PD+ A +V  + T  
Sbjct: 196 ELRQHQVRVSLVAPGSVRTEFGVGLSAKK---------SALGAIEPDDIADVVALLATQA 246

Query: 239 --LINGEVI 245
                 EV+
Sbjct: 247 DQSFISEVL 255

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  164 bits (417), Expect = 3e-50
 Identities = 75/270 (27%), Positives = 121/270 (44%), Gaps = 41/270 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG----ESVAKELGPDVKFAP 56
           ++   +  VTGG  G+G +  +R+ ++G RVV    P S          K LG D   + 
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKR 110
            +V   +  ++A    K   G++DV VN AGI            T   +      +D++ 
Sbjct: 70  GNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI------------TRDVVFRKMTREDWQA 117

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
           ++  N    FNV +     + E         G IIN +S+   +GQ GQ  YS +K+GI 
Sbjct: 118 VIDTNLTSLFNVTKQVIDGMVERG------WGRIINISSVNGQKGQFGQTNYSTAKAGIH 171

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
           G T+ +A+++A  G+ VNT++PG   T ++  +   V   +  +IP  +RLG PDE   +
Sbjct: 172 GFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPV-RRLGSPDEIGSI 230

Query: 231 VQ-------SIITNPLINGEVIRIDGALRM 253
           V           T     G    ++G L M
Sbjct: 231 VAWLASEESGFST-----GADFSLNGGLHM 255

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  164 bits (418), Expect = 3e-50
 Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 38/265 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L+G V LVTGG+ GLG    + +   G  VV+      E    A++L    G +      
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV++ E+V+K +   K+ FGKLD  VN AGI+               LD+F++++ VN  
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEE------FPLDEFRQVIEVNLF 132

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-GQSGQVAYSASKSGIVGMTLPM 176
           GT+ V R +  L+ E+          IIN  S+   E       AY+ASK G+  +T  +
Sbjct: 133 GTYYVCREAFSLLRESD------NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKAL 186

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
           A++    GIRVN IAPG + T +   +  + +  +++ + IP   R G P++        
Sbjct: 187 AKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL-GRTGVPEDLK------ 239

Query: 235 ITNPL----------INGEVIRIDG 249
                          + G++I +DG
Sbjct: 240 --GVAVFLASEEAKYVTGQIIFVDG 262

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  164 bits (417), Expect = 4e-50
 Identities = 72/278 (25%), Positives = 111/278 (39%), Gaps = 47/278 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
               V LVTG  SG+G     R+ +EG RV +C        +  KEL   G +      D
Sbjct: 20  QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCD 79

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH---SLDDFKRILLVN 115
           V S  +++  V    + +G +DV VN AG            G      + + +  ++  N
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRP---------GGGATAELADELWLDVVETN 130

Query: 116 TVGTFNVAR--LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
             G F V +  L A  + E         G I+N AS    +G      YSASK G+VG T
Sbjct: 131 LTGVFRVTKQVLKAGGMLERG------TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFT 184

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTP-----------LLSMLNEKVRNFLARSIPAPQRLG 222
             +  +LA  GI VN + PG  +TP           +  +  E+  + +   +P   R  
Sbjct: 185 KALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYV 243

Query: 223 HPDEFAQLVQ-------SIITNPLINGEVIRIDGALRM 253
            P E A++V        + +T      + + + G L  
Sbjct: 244 QPSEVAEMVAYLIGPGAAAVT-----AQALNVCGGLGN 276

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  163 bits (415), Expect = 5e-50
 Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 41/270 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAP 56
           M      LVTG + G+G++   ++  EG  V +    + E  E+V +E+   G D     
Sbjct: 1   MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKR 110
            +V   ++V+  +      FG LDV VN AGI            T  +L       ++  
Sbjct: 61  ANVADADEVKAMIKEVVSQFGSLDVLVNNAGI------------TRDNLLMRMKEQEWDD 108

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
           ++  N  G FN  + +   +   +       G IIN +S+    G  GQ  Y A+K+G++
Sbjct: 109 VIDTNLKGVFNCIQKATPQMLRQR------SGAIINLSSVVGAVGNPGQANYVATKAGVI 162

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
           G+T   AR+LA  GI VN +APG   + +   L+++++  +   IP   R G   + A  
Sbjct: 163 GLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPL-ARFGQDTDIANT 221

Query: 231 VQ-------SIITNPLINGEVIRIDGALRM 253
           V          IT     G+ I ++G + M
Sbjct: 222 VAFLASDKAKYIT-----GQTIHVNGGMYM 246

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  163 bits (414), Expect = 7e-50
 Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 41/270 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAP 56
           MLKG V LVTG + G+G+A    + ++G  VV+      +    V  E+   G D     
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKR 110
            DV + EDV   V    D FG++D+ VN AG+            T  +L      +++  
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGV------------TKDNLLMRMKEEEWDT 108

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
           ++  N  G F   +  ++ +   +       G I+N AS+    G  GQ  Y A+K+G++
Sbjct: 109 VINTNLKGVFLCTKAVSRFMMRQR------HGRIVNIASVVGVTGNPGQANYVAAKAGVI 162

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
           G+T   A++LA   I VN IAPG   T +  +L+E ++  + + IPA  + G   + A  
Sbjct: 163 GLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPA-AQFGEAQDIANA 221

Query: 231 VQ-------SIITNPLINGEVIRIDGALRM 253
           V          IT     G+ + +DG + M
Sbjct: 222 VTFFASDQSKYIT-----GQTLNVDGGMVM 246

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  163 bits (415), Expect = 9e-50
 Identities = 53/272 (19%), Positives = 95/272 (34%), Gaps = 27/272 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL----GPDVKFAP 56
            +    ++TGGA  +G +   R+ ++G RVV+    +    + +  EL            
Sbjct: 9   SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCK 68

Query: 57  VDVTSEEDV----QKAVLLCKDSFGKLDVNVNCAGIS-----CAFKIFNYNKGTVHSLDD 107
            D++    +    +  +     +FG+ DV VN A              N           
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128

Query: 108 FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKS 167
              +   N V    + R  A+   E           ++N           G   Y+ +K 
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSR-NLSVVNLCDAMTDLPLPGFCVYTMAKH 187

Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEF 227
            + G+T   A +LA   IRVN +APGL   P    + ++ +    R +P  Q      + 
Sbjct: 188 ALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPLGQSEASAAQI 245

Query: 228 AQLV------QSIITNPLINGEVIRIDGALRM 253
           A  +       +      I G  +++DG L +
Sbjct: 246 ADAIAFLVSKDA----GYITGTTLKVDGGLIL 273

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  163 bits (414), Expect = 1e-49
 Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 25/257 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVL---CDLPTSEGESVAKEL---GPDVKFA 55
           LK  V ++ GG   LG  T +    E   +VL       +     +  EL   G  V   
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILL 113
             D+++EE+V K     +  FGK+D+ +N  G           K  +   S  +F  +  
Sbjct: 69  QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGK--------VLKKPIVETSEAEFDAMDT 120

Query: 114 VNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
           +N    +   + +A+ ++ N        G II  A+            Y+ +K+ +   T
Sbjct: 121 INNKVAYFFIKQAAKHMNPN--------GHIITIATSLLAAYTGFYSTYAGNKAPVEHYT 172

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
              +++L    I VN IAPG  DT        K      +S     +L   ++ A +++ 
Sbjct: 173 RAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKF 232

Query: 234 IITNPL-INGEVIRIDG 249
           + T+   ING+ I  +G
Sbjct: 233 LTTDGWWINGQTIFANG 249

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  163 bits (415), Expect = 1e-49
 Identities = 63/290 (21%), Positives = 104/290 (35%), Gaps = 59/290 (20%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---------------- 45
           ++G V  VTG A G G++   R+ +EG  ++  D+       V                 
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 46  ---KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV 102
              K     +  A VDV   + ++ AV    +  G+LD+ V  AGI            T+
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNG-------GDTL 121

Query: 103 H--SLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV 160
              S +D+  ++ +N  G +   +  A + H   +   G  G II T+S+   +      
Sbjct: 122 DKTSEEDWTEMIDINLAGVWKTVK--AGVPH---MIAGGRGGSIILTSSVGGLKAYPHTG 176

Query: 161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--------------EK 206
            Y A+K G+VG+      +L    IRVN++ P    TP+L                  + 
Sbjct: 177 HYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDD 236

Query: 207 VRNFLARSIPAPQRLGHPDEFAQLV-------QSIITNPLINGEVIRIDG 249
           +          P     P + +  V          IT     G  + ID 
Sbjct: 237 MAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYIT-----GVTLPIDA 281

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  161 bits (410), Expect = 2e-49
 Identities = 89/269 (33%), Positives = 134/269 (49%), Gaps = 41/269 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           LKG   +VTG + GLGKA   ++   G  +VL   P S   ++ A+E    G +V  A  
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRI 111
           DV + EDV+  V    D+FG++D+ VN AGI            T  +L       D+  +
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGI------------TRDTLMLKMSEKDWDDV 110

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVG 171
           L  N    +   +  ++++ + K       G IIN  SIA   G +GQ  Y+ASK+G++G
Sbjct: 111 LNTNLKSAYLCTKAVSKIMLKQK------SGKIINITSIAGIIGNAGQANYAASKAGLIG 164

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
            T  +A++ A  GI  N +APG+  T +  +L +KV+     +IP  +R G P+E A +V
Sbjct: 165 FTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPL-KRFGTPEEVANVV 223

Query: 232 Q-------SIITNPLINGEVIRIDGALRM 253
                   + IT     G+VI IDG L M
Sbjct: 224 GFLASDDSNYIT-----GQVINIDGGLVM 247

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  161 bits (409), Expect = 4e-49
 Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 41/266 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   L+TG +SG+G A    + + G +V++      + +S+   L  +      ++ +
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRILLVN 115
           +E+    +         LD+ V  AGI            T  +L       DF +++ +N
Sbjct: 72  KEECSNLI----SKTSNLDILVCNAGI------------TSDTLAIRMKDQDFDKVIDIN 115

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F + R + + + + +       G IIN +SI    G  GQ  Y ASK+G++GMT  
Sbjct: 116 LKANFILNREAIKKMIQKR------YGRIINISSIVGIAGNPGQANYCASKAGLIGMTKS 169

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           ++ ++A  GI VN +APG   + +   LNEK R  + + IP     G P++ A  V    
Sbjct: 170 LSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPL-GTYGIPEDVAYAVAFLA 228

Query: 233 ----SIITNPLINGEVIRIDGALRMI 254
               S IT     G+ + ++G + M+
Sbjct: 229 SNNASYIT-----GQTLHVNGGMLMV 249

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  161 bits (410), Expect = 4e-49
 Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 33/265 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
                 +V G    +G+A   R  +EG  VVL     +EG  +   E+   G        
Sbjct: 6   FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+T+  +V+ A+    D FG++   V+ AG      +             + ++L VN  
Sbjct: 66  DLTNAAEVEAAISAAADKFGEIHGLVHVAGG-----LIARKTIAEMDEAFWHQVLDVNLT 120

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-GQVAYSASKSGIVGMTLPM 176
             F  A+ +   + +         G I+  +S A  +G   G +AY+ SK  ++  T  +
Sbjct: 121 SLFLTAKTALPKMAKG--------GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGL 172

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNE-KVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           A+++ G  IRVN + PG+  T       + +VR  +A +    +R G  ++ A LV    
Sbjct: 173 AKEV-GPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSL-KREGSSEDVAGLVAFLA 230

Query: 233 ----SIITNPLINGEVIRIDGALRM 253
               + +T     G    I+G +  
Sbjct: 231 SDDAAYVT-----GACYDINGGVLF 250

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  161 bits (409), Expect = 4e-49
 Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 31/240 (12%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKF 54
           +LKG V LVTG A G+G A        G  VVL     +    V+ ++       P +  
Sbjct: 11  LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIA 70

Query: 55  APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
             ++  + +  ++     +  FG+LD  ++ A I                 +DF +++ V
Sbjct: 71  LNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPL-----EQLPDEDFMQVMHV 125

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N   TF + R    L+  ++         I  T+S    +G++   AY  SK    G+  
Sbjct: 126 NVNATFMLTRALLPLLKRSE------DASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQ 179

Query: 175 PMARDLAGA-GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA--PQRLGHPDEFAQLV 231
            +A +L G   +R N+I PG   T              A++ P   P     P++   + 
Sbjct: 180 TLADELEGVTAVRANSINPGATRTG-----------MRAQAYPDENPLNNPAPEDIMPVY 228

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  161 bits (411), Expect = 4e-49
 Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 40/265 (15%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
             +  V LVTG   G+G+   + + +    V+         +SV  E+   G +      
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRI 111
           DV+ +E++ + +         +D+ VN AGI            T  +L      D+++ +
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGI------------TRDNLFLRMKNDEWEDV 148

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVG 171
           L  N    F + +  ++ +  N+       G IIN +SI    G  GQ  YS+SK+G++G
Sbjct: 149 LRTNLNSLFYITQPISKRMINNR------YGRIINISSIVGLTGNVGQANYSSSKAGVIG 202

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
            T  +A++LA   I VN IAPG   + +   ++E+++  +  +IPA  R+G P+E A L 
Sbjct: 203 FTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPA-GRMGTPEEVANLA 261

Query: 232 Q-------SIITNPLINGEVIRIDG 249
                     I      G V  IDG
Sbjct: 262 CFLSSDKSGYIN-----GRVFVIDG 281

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  161 bits (409), Expect = 7e-49
 Identities = 73/269 (27%), Positives = 116/269 (43%), Gaps = 40/269 (14%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
            L   V +VTG + G+G+A    + R G  V+      +  E +       G + + A +
Sbjct: 25  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRI 111
           +V     V   V      FG L+V VN AGI            T   L      D++  +
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGI------------TQDQLAMRMKDDEWDAV 132

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVG 171
           +  N    F ++R   + + + +       G I+N  S+    G  GQV Y+A+K+G+ G
Sbjct: 133 IDTNLKAVFRLSRAVLRPMMKAR------GGRIVNITSVVGSAGNPGQVNYAAAKAGVAG 186

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           MT  +AR++   GI VN +APG  DT +   L ++ +  L   IP   RLG P++ A  V
Sbjct: 187 MTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPL-GRLGSPEDIAHAV 245

Query: 232 Q-------SIITNPLINGEVIRIDGALRM 253
                     IT     G  + ++G + M
Sbjct: 246 AFLASPQAGYIT-----GTTLHVNGGMFM 269

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  159 bits (406), Expect = 9e-49
 Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 32/261 (12%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPVDVTS 61
           V +VTG + G+GKA    + + G +V++    +++  E V+K++   G        DV+ 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRILLVN 115
           E DV+  +    D++G +DV VN AGI            T  +L        +  ++ +N
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGI------------TRDTLLIRMKKSQWDEVIDLN 110

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G F   + + +++ + +      +G IIN AS+    G  GQ  Y+A+K+G++G +  
Sbjct: 111 LTGVFLCTQAATKIMMKKR------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKT 164

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            AR+ A   I VN + PG   + + + L E +   +  +IP   R G P+  A LV+ + 
Sbjct: 165 AAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPL-GRTGQPENVAGLVEFLA 223

Query: 236 TNPL---INGEVIRIDGALRM 253
            +P    I G+   IDG + +
Sbjct: 224 LSPAASYITGQAFTIDGGIAI 244

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  160 bits (406), Expect = 1e-48
 Identities = 51/252 (20%), Positives = 92/252 (36%), Gaps = 22/252 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
            +     V G    +G    ++   EG  V        +   +  E+   G  +    +D
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD 64

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
             +E++V   +    D+   L+V +   G +  F I         +   F+++  +    
Sbjct: 65  ARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVNFPILE------TTDRVFRKVWEMACWA 117

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F   R SA+L+  +       +G I  T + A+  G SG  A++++K G+  +   MAR
Sbjct: 118 GFVSGRESARLMLAHG------QGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMAR 171

Query: 179 DLAGAGIRV-NTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
           +L    I V + I     DT  +    E++    A +   P  L  P   A     +   
Sbjct: 172 ELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALAN--PDLLMPPAAVAGAYWQLYQQ 229

Query: 238 P---LINGEVIR 246
           P         IR
Sbjct: 230 PKSAWTFEMEIR 241

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  160 bits (406), Expect = 2e-48
 Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 24/257 (9%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAP 56
           M    V +VTG + G+G A   R+  +G  VV+     +   E VA ++   G     A 
Sbjct: 24  METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQ 83

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DV+    V++     +++FG +DV VN AGI                   F R++ VN 
Sbjct: 84  ADVSDPAAVRRLFATAEEAFGGVDVLVNNAGI------MPLTTIAETGDAVFDRVIAVNL 137

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            GTFN  R +AQ +           G IIN ++            Y+A+K+G+  MT  +
Sbjct: 138 KGTFNTLREAAQRLRVG--------GRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVL 189

Query: 177 ARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           +++L G  I VN +APG   T L L   +++VR+  A+  P  +RLG P + A  V + +
Sbjct: 190 SKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPL-ERLGTPQDIAGAV-AFL 247

Query: 236 TNPL---INGEVIRIDG 249
             P    +NG+V+R +G
Sbjct: 248 AGPDGAWVNGQVLRANG 264

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  160 bits (408), Expect = 2e-48
 Identities = 60/284 (21%), Positives = 101/284 (35%), Gaps = 51/284 (17%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS------------EGESVAKE-- 47
           ++G V  +TG A G G++    + REG  ++  D+               +     ++  
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 48  -LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
            LG  +  + VDV   + +Q AV       G+LD+ +  A ++      N          
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNR-----MDPK 140

Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
            ++ ++ VN  G +  AR++        +      G I+ T+SI    G      Y ASK
Sbjct: 141 TWRDMIDVNLNGAWITARVAIP-----HIMAGKRGGSIVFTSSIGGLRGAENIGNYIASK 195

Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA--------- 217
            G+ G+   MA +L    IRVN + P    TP+L               P          
Sbjct: 196 HGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR 255

Query: 218 -----PQRLGHPDEFAQLVQ-------SIITNPLINGEVIRIDG 249
                P     P + +  +          IT     G  + +DG
Sbjct: 256 QMHVLPIPYVEPADISNAILFLVSDDARYIT-----GVSLPVDG 294

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  159 bits (405), Expect = 3e-48
 Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 34/267 (12%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG----ESVAKELGPDVKFAP 56
           M    V  VTGG  GLG A   R+   G  V +     ++         ++ G D K   
Sbjct: 22  MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYA 81

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
           VDV   E  ++        FGK+DV +N AGI+           T    +  D+  ++  
Sbjct: 82  VDVADFESCERCAEKVLADFGKVDVLINNAGIT--------RDATFMKMTKGDWDAVMRT 133

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           +    FNV +     + E +       G I+N  S+    G  GQ  Y+++K+GI G T 
Sbjct: 134 DLDAMFNVTKQFIAGMVERR------FGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTK 187

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN-FLARSIPAPQRLGHPDEFAQLVQ- 232
            +A + A  GI VNT++PG   T ++  + + V    +   IP   RLG PDE A L+  
Sbjct: 188 TLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPV-GRLGRPDEVAALIAF 246

Query: 233 ------SIITNPLINGEVIRIDGALRM 253
                   +T     G  + I+G + M
Sbjct: 247 LCSDDAGFVT-----GADLAINGGMHM 268

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  159 bits (404), Expect = 5e-48
 Identities = 52/266 (19%), Positives = 91/266 (34%), Gaps = 37/266 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-------ESVAKEL---GPD 51
           L G    +TG + G+G A   R  R+G  V +                S A  +   G  
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63

Query: 52  VKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRI 111
                 D+  E+ V+ AV    D+FG +D+ VN A         +        +  F  +
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDT------PMKRFDLM 117

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--SGQVAYSASKSGI 169
             VN  G+F  A+     + +           I+  A   +           Y+ +K G+
Sbjct: 118 QQVNARGSFVCAQACLPHLLQAP------NPHILTLAPPPSLNPAWWGAHTGYTLAKMGM 171

Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLF-DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
             +TL +A +    G+ +N + P     T  ++ML                    P+  A
Sbjct: 172 SLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPG----------VDAAACRRPEIMA 221

Query: 229 QLVQSIITNP--LINGEVIRIDGALR 252
               +++T      +G+ +  D  L 
Sbjct: 222 DAAHAVLTREAAGFHGQFLIDDEVLA 247

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  160 bits (406), Expect = 7e-48
 Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 13/240 (5%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAP 56
             G    VTGGA+G+G   V +++ +G +V + D+     +     L     GP+V    
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           +DV S E  + A    +  FG + +  N AG++    I         S DD+  +L VN 
Sbjct: 66  LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEE------SSYDDWDWLLGVNL 119

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G  N        + E     +   G ++NTAS+AA+        Y+ +K  + G++  +
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESL 179

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
              L    I V+ + PGL  + + +  ++ +R    +    P      +  A + +  + 
Sbjct: 180 HYSLLKYEIGVSVLCPGLVKSYIYA--SDDIRPDALKGEVKPVDKTAVERLAGVHEFGME 237

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  157 bits (400), Expect = 9e-48
 Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 40/268 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L   V LVTG + G+G      +  +G  VV      +  E     +   G   +   ++
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRIL 112
           ++  E +Q      K     +D+ VN AGI            T  +L      D+++ ++
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGI------------TRDNLMMRMSEDEWQSVI 110

Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
             N    F +++   + + + +       G II+  S+    G  GQ  Y A+K+G++G 
Sbjct: 111 NTNLSSIFRMSKECVRGMMKKR------WGRIISIGSVVGSAGNPGQTNYCAAKAGVIGF 164

Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
           +  +A ++A   I VN +APG   T +   L ++ ++F+A  IP+  ++G P + A  V 
Sbjct: 165 SKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPS-GQIGEPKDIAAAVA 223

Query: 233 -------SIITNPLINGEVIRIDGALRM 253
                    IT     G+ + ++G + M
Sbjct: 224 FLASEEAKYIT-----GQTLHVNGGMYM 246

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  157 bits (398), Expect = 1e-47
 Identities = 38/254 (14%), Positives = 79/254 (31%), Gaps = 32/254 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +     +V GG   LG A +E   + G  V+  DL  ++       +  +      + T 
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNK-----NWTE 55

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           +E              ++D     AG             +   + +   ++  +   +  
Sbjct: 56  QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSAS-----SKDFVKNADLMIKQSVWSSAI 110

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            A+L+   +           G++  T + AA       + Y  +K+ +  +T  +A   +
Sbjct: 111 AAKLATTHLKPG--------GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDS 162

Query: 182 GA--GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
           G      V TI P   DTP+         N                  ++ +    T   
Sbjct: 163 GLPDNSAVLTIMPVTLDTPM---------NRKWMPNADHSSWTPLSFISEHLLKWTTETS 213

Query: 239 --LINGEVIRIDGA 250
               +G +++I   
Sbjct: 214 SRPSSGALLKITTE 227

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  156 bits (397), Expect = 2e-47
 Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 35/255 (13%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
             LVTGG+ G+G+A  E +V  G RV +        E  A+ LG      P D+  ++D 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIAS---RNPEEAAQSLG--AVPLPTDL-EKDDP 57

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV-HSLDDFKRILLVNTVGTFNVAR 124
           +  V    ++ G L V V+ A +       N  K  +  S ++++R+L ++    F +A+
Sbjct: 58  KGLVKRALEALGGLHVLVHAAAV-------NVRKPALELSYEEWRRVLYLHLDVAFLLAQ 110

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYE--GQSGQVAYSASKSGIVGMTLPMARDLAG 182
            +A  + E         G ++   S+  +   G     AY+ +K+ ++G+T  +A++ A 
Sbjct: 111 AAAPHMAEAG------WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWAR 164

Query: 183 AGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLV------QSI 234
            GIRVN + PG  +T     L  N ++   +   IP   R   P+E A++       ++ 
Sbjct: 165 LGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM-GRWARPEEIARVAAVLCGDEA- 222

Query: 235 ITNPLINGEVIRIDG 249
                + G+ + +DG
Sbjct: 223 ---EYLTGQAVAVDG 234

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  156 bits (397), Expect = 2e-47
 Identities = 74/266 (27%), Positives = 116/266 (43%), Gaps = 42/266 (15%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL----GPDVKFAPVDVT 60
             L+TG + G+G+A   R+  +G  + +      E  E VA+E      P V     ++ 
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRILLV 114
             E     V    +  G LD  VN AGI            T  +L      +D++ +L  
Sbjct: 63  EAEAATALVHQAAEVLGGLDTLVNNAGI------------TRDTLLVRMKDEDWEAVLEA 110

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
           N    F   R + +L+ + +       G I+N  S+    G  GQ  Y ASK+G++G T 
Sbjct: 111 NLSAVFRTTREAVKLMMKAR------FGRIVNITSVVGILGNPGQANYVASKAGLIGFTR 164

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ-- 232
            +A++ A  GI VN +APG  +T +   L ++V+    + IPA  R G P+E A+ V   
Sbjct: 165 AVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPA-GRFGRPEEVAEAVAFL 223

Query: 233 -----SIITNPLINGEVIRIDGALRM 253
                  IT     G+ + +DG L  
Sbjct: 224 VSEKAGYIT-----GQTLCVDGGLTP 244

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  156 bits (398), Expect = 4e-47
 Identities = 63/262 (24%), Positives = 104/262 (39%), Gaps = 36/262 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA--KELGPDVKFAPVDV 59
           L G   +VTG  SG+G+A      R G  V+         E      + G   +    D+
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADL 88

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
              E              ++DV VN AGI               SL  ++ +L VN    
Sbjct: 89  ADLEGAANVAEELAA-TRRVDVLVNNAGII------ARAPAEEVSLGRWREVLTVNLDAA 141

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           + ++R     +  +        G I+  AS+ +++G     AY+ASK  +VG+T  +A +
Sbjct: 142 WVLSRSFGTAMLAHG------SGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASE 195

Query: 180 LAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
            AG G+ VN +APG   T   + L  +++    +   IPA  R   P++           
Sbjct: 196 WAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA-GRWATPEDMV--------G 246

Query: 238 PL----------INGEVIRIDG 249
           P           ++G+V+ +DG
Sbjct: 247 PAVFLASDAASYVHGQVLAVDG 268

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  155 bits (395), Expect = 4e-47
 Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 35/257 (13%)

Query: 6   VGLVTGGASGLGKATVERIVREG-------GRVVLCDLPTSEGESVAKEL---GPDVKFA 55
           + L+TG   G+G+A      R           +VL     ++ E ++ E    G      
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D++   DV++      + +G +D  VN AG+     + +       + +DF   +  N
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDL------TEEDFDYTMNTN 117

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             GTF + +    L+           G I    S+AA +       Y  SK G  G+   
Sbjct: 118 LKGTFFLTQALFALMERQH------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVET 171

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           M        +R+  + PG   TP+   ++++++            +  P++ A  V    
Sbjct: 172 MRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQ----------ALMMMPEDIAAPVVQAY 221

Query: 236 TNP---LINGEVIRIDG 249
             P   ++   ++R   
Sbjct: 222 LQPSRTVVEEIILRPTS 238

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  156 bits (396), Expect = 5e-47
 Identities = 60/275 (21%), Positives = 105/275 (38%), Gaps = 42/275 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAP 56
           ++G + +VT G+SGLG A+   + R G R++L      + E+ A  +     G  V    
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            D+    D+ +     +D  G  D+ V   G     +           ++D+     +  
Sbjct: 65  GDIREPGDIDRLFEKARD-LGGADILVYSTGGPRPGRFMEL------GVEDWDESYRLLA 117

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
                V R +A+ + E         G ++   S+            +  +  ++G+   +
Sbjct: 118 RSAVWVGRRAAEQMVEKG------WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTL 171

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPD 225
           A +LA  G+ VN + P L  T  +  L            E+    +A  IP   R+G P+
Sbjct: 172 ALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPM-GRVGKPE 230

Query: 226 EFAQLVQ-------SIITNPLINGEVIRIDGALRM 253
           E A +V        S IT     G VI +DG   +
Sbjct: 231 ELASVVAFLASEKASFIT-----GAVIPVDGGAHI 260

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  155 bits (395), Expect = 5e-47
 Identities = 60/261 (22%), Positives = 92/261 (35%), Gaps = 36/261 (13%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEED- 64
           V  +TG ASG+G A  E + R G  V+  D   ++ E+     G         +      
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGV 62

Query: 65  ----VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRILLVNTVG 118
               V  A +    +   L V VN  G+           G   +L        ++V ++ 
Sbjct: 63  LDGLVCCAGVGVTAANSGLVVAVNYFGV------SALLDGLAEALSRGQQPAAVIVGSIA 116

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
                        E  + E  L G       +A  +GQ   +AY+ SK  +  +      
Sbjct: 117 ATQPGA------AELPMVEAMLAGDEARAIELAEQQGQ-THLAYAGSKYAVTCLARRNVV 169

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLN---EKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           D AG G+R+N +APG  +TPLL           +      P   R   P E A+ +    
Sbjct: 170 DWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPL-GRGSEPREVAEAIAFLL 228

Query: 233 ----SIITNPLINGEVIRIDG 249
               S I      G V+ +DG
Sbjct: 229 GPQASFIH-----GSVLFVDG 244

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  155 bits (395), Expect = 9e-47
 Identities = 82/266 (30%), Positives = 129/266 (48%), Gaps = 35/266 (13%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAP 56
            L   + LVTG + G+G+A    +   G +V +    ++   + V   +   G +     
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKR 110
            DV+ E +V+       + +G+LDV VN AGI            T  +L      DD++ 
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGI------------TRDTLLLRMKRDDWQS 132

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
           +L +N  G F  +R +A+++ + +       G IIN AS+    G  GQ  YSA+K+G++
Sbjct: 133 VLDLNLGGVFLCSRAAAKIMLKQR------SGRIINIASVVGEMGNPGQANYSAAKAGVI 186

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
           G+T  +A++LA  GI VN +APG   T + S L  +    L   IP   R G   E A +
Sbjct: 187 GLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEK---LLEVIPL-GRYGEAAEVAGV 242

Query: 231 VQSIITNPL---INGEVIRIDGALRM 253
           V+ +  +P    I G+VI IDG L M
Sbjct: 243 VRFLAADPAAAYITGQVINIDGGLVM 268

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  154 bits (392), Expect = 9e-47
 Identities = 36/234 (15%), Positives = 70/234 (29%), Gaps = 33/234 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +    LV GG   LG   V+        V   D+  +E  S +  +           T 
Sbjct: 5   GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD-----SFTE 59

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           + D   A +       K+D  +  AG        + +        +   +   +   +  
Sbjct: 60  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKS-----LFKNCDLMWKQSIWTSTI 114

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
            + L+ + + E         G++    + AA +G  G + Y  +K  +  +   +A   +
Sbjct: 115 SSHLATKHLKE--------GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNS 166

Query: 182 GA--GIRVNTIAPGLFDTPLL--SMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           G   G     + P   DTP+   SM                      +   +  
Sbjct: 167 GMPSGAAAIAVLPVTLDTPMNRKSMPEADFS-----------SWTPLEFLVETF 209

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  156 bits (396), Expect = 1e-46
 Identities = 63/295 (21%), Positives = 94/295 (31%), Gaps = 68/295 (23%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS---------------EGESVAK 46
           ++  V LVTGGA G G++   ++  EG  ++L D+                  E     +
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 47  ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
           + G     A VDV     V + +      FGKLDV V  AGI           G    + 
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC--------PLGAHLPVQ 119

Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS--------- 157
            F     V+ VG  N    +   +             II T S+A     +         
Sbjct: 120 AFADAFDVDFVGVINTVHAALPYLTS--------GASIITTGSVAGLIAAAQPPGAGGPQ 171

Query: 158 --GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL-----------SMLN 204
             G   YS +K  +   TL +A  LA   IR N I P   +T +L            +  
Sbjct: 172 GPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEA 231

Query: 205 EKVRNFLARSIPA---PQRLGHPDEFAQLVQ-------SIITNPLINGEVIRIDG 249
               + L         P       + +  V          +T     G   ++D 
Sbjct: 232 PSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVT-----GLQFKVDA 281

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  154 bits (393), Expect = 1e-46
 Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 41/265 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L+G V LVTG   G+G+A  E++   G  V++        ++VA+E+    G       +
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRI 111
           ++ SEE + KA     +    +D+ VN AGI            T   L       D++ +
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGI------------TRDKLFLRMSLLDWEEV 112

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVG 171
           L VN  GTF V + S + + + +       G I+N +S+  + G  GQV YS +K+G++G
Sbjct: 113 LKVNLTGTFLVTQNSLRKMIKQR------WGRIVNISSVVGFTGNVGQVNYSTTKAGLIG 166

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
            T  +A++LA   + VN +APG  +T + ++L+E+++      IP   R G P+E A +V
Sbjct: 167 FTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPL-GRFGSPEEVANVV 225

Query: 232 Q-------SIITNPLINGEVIRIDG 249
                   S IT     GEVI ++G
Sbjct: 226 LFLCSELASYIT-----GEVIHVNG 245

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  156 bits (396), Expect = 1e-46
 Identities = 72/263 (27%), Positives = 110/263 (41%), Gaps = 35/263 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG--ESVAK---ELGPDVKFAP 56
           LK    LVTGG SG+G+A      REG  V +  LP  E   + V     E G      P
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            D++ E   +  V   +++ G LD+    AG   A            + + F++   VN 
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEI-----KDLTSEQFQQTFAVNV 161

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
              F + + +  L+ +           II T+SI AY+     + Y+A+K+ I+  +  +
Sbjct: 162 FALFWITQEAIPLLPKG--------ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGL 213

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLL---SMLNEKVRNFLARSIPAPQRLGHPDEFAQLV-- 231
           A+ +A  GIRVN +APG   T L        +K+  F     P  +R G P E A +   
Sbjct: 214 AKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQ-QTPM-KRAGQPAELAPVYVY 271

Query: 232 -----QSIITNPLINGEVIRIDG 249
                 S +T      EV  + G
Sbjct: 272 LASQESSYVT-----AEVHGVCG 289

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  155 bits (395), Expect = 1e-46
 Identities = 54/263 (20%), Positives = 89/263 (33%), Gaps = 31/263 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-------ESVAKE---LGPD 51
           L+G    ++GG+ G+G A  +R+  +G  V L                + AKE    G  
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66

Query: 52  VKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRI 111
                 D+   + V  AV    + FG +D+ VN A       I          L  F  +
Sbjct: 67  ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEV------PLKRFDLM 120

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-SGQVAYSASKSGIV 170
             +   GT+ V++     +             I+  +     E +      Y  +K G+ 
Sbjct: 121 NGIQVRGTYAVSQSCIPHMKGRD------NPHILTLSPPIRLEPKWLRPTPYMMAKYGMT 174

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
              L +A +L  AGI  NT+ P              V+N L        R   P+ +A  
Sbjct: 175 LCALGIAEELRDAGIASNTLWPRTTVAT------AAVQNLLGGDEAM-ARSRKPEVYADA 227

Query: 231 VQSIITNP-LINGEVIRIDGALR 252
              ++  P    G  +  +  L 
Sbjct: 228 AYVVLNKPSSYTGNTLLCEDVLL 250

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  154 bits (392), Expect = 3e-46
 Identities = 69/286 (24%), Positives = 107/286 (37%), Gaps = 61/286 (21%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS------------EGESVAKE-- 47
           L G V  +TG A G G+A   R+  +G  ++  DL               E  +  K   
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 48  -LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
            +G  +     DV   E +  A+    D  G+LD+ V  AGI                 D
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI-APMSA---------GDD 120

Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS----GQVAY 162
            +  ++ VN  G ++  +++   + +      G  G I+  +S A   G      G V Y
Sbjct: 121 GWHDVIDVNLTGVYHTIKVAIPTLVKQ-----GTGGSIVLISSSAGLAGVGSADPGSVGY 175

Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA----- 217
            A+K G+VG+    A  LAG  IRVN+I P   +TP   M+N +        + A     
Sbjct: 176 VAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETP---MINNEFTREWLAKMAAATDTP 232

Query: 218 -------PQRLGHPDEFAQLVQ-------SIITNPLINGEVIRIDG 249
                  P  +  P++ A  V          IT     G  + +D 
Sbjct: 233 GAMGNAMPVEVLAPEDVANAVAWLVSDQARYIT-----GVTLPVDA 273

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  153 bits (390), Expect = 4e-46
 Identities = 53/256 (20%), Positives = 98/256 (38%), Gaps = 19/256 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVD 58
           + G V +VTG + G+G+    ++ + G  V +          VA+E   LG        D
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62

Query: 59  VTSEEDVQKAV-LLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV-HSLDDFKRILLVNT 116
            + E +V+     + ++  G+LDV VN A       +   NK         +  I  V  
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G +  +   A+L+          +G+I+  +S  +       V Y   K+    +    
Sbjct: 123 RGHYFCSVYGARLMVPAG------QGLIVVISSPGSL-QYMFNVPYGVGKAACDKLAADC 175

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN----FLARSIPAPQRLGHPDEFAQLVQ 232
           A +L   G+   ++ PG+  T LL     K        L +   A       +   + V 
Sbjct: 176 AHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVV 235

Query: 233 SIITNPL---INGEVI 245
           ++ T+P    ++G+V+
Sbjct: 236 ALATDPNILSLSGKVL 251

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  153 bits (390), Expect = 5e-46
 Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 31/264 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAP 56
           M    V LVTGG+ G+G A      R+G RV +      E  ++V   +   G +    P
Sbjct: 23  MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIP 82

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
            DV +  D+          FG+LD  VN AGI             V   S++  +R+L V
Sbjct: 83  GDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIV-------DYPQRVDEMSVERIERMLRV 135

Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMT 173
           N  G+   A  + + +        G  G I+N +S+AA  G + Q V Y+ASK+ I   T
Sbjct: 136 NVTGSILCAAEAVRRMSRLY---SGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFT 192

Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
           + +AR++A  GIRVN + PG+ +T L  S         +A S+P  QR G P+E A  + 
Sbjct: 193 IGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPM-QRAGMPEEVADAIL 251

Query: 233 -------SIITNPLINGEVIRIDG 249
                  S +T     G ++ + G
Sbjct: 252 YLLSPSASYVT-----GSILNVSG 270

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  154 bits (391), Expect = 1e-45
 Identities = 55/284 (19%), Positives = 91/284 (32%), Gaps = 34/284 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL------------ 48
               V LVTG A  LG++  E +  EG  V L    ++    +++  L            
Sbjct: 44  PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 103

Query: 49  ---------GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIF---- 95
                              VT      + V  C   +G+ DV VN A       +     
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163

Query: 96  ----NYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA 151
                              +   N +  + + +  A  +        G    IIN     
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 223

Query: 152 AYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL 211
             +   G   Y+ +K  + G+T   A +LA   IRVN + PGL        +   V    
Sbjct: 224 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--DDMPPAVWEGH 281

Query: 212 ARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGALRM 253
              +P  QR     E + +V  + ++    I G  +++DG   +
Sbjct: 282 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  153 bits (389), Expect = 1e-45
 Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 33/265 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAK---ELGPDVKFAPV 57
           LKG   L+TGG SG+G+A      +EG  + +  L          +   + G      P 
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D++ E+  +  V       G L++ VN        +          + +  ++   +N  
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGL-----EYITAEQLEKTFRINIF 159

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             F+V +  A L H  +        VIINTASI AYEG    + YSA+K  IV  T  ++
Sbjct: 160 SYFHVTK--AALSHLKQ------GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLS 211

Query: 178 RDLAGAGIRVNTIAPGLFDTPLL--SMLNEKVRNFLARSIPAPQRLGHPDEFAQLV---- 231
           + L   GIRVN +APG   TPL+  S   +KV  F + ++P  QR G P E A       
Sbjct: 212 QSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGS-NVPM-QRPGQPYELAPAYVYLA 269

Query: 232 ---QSIITNPLINGEVIRIDGALRM 253
               S +T     G++I ++G + +
Sbjct: 270 SSDSSYVT-----GQMIHVNGGVIV 289

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  151 bits (385), Expect = 1e-45
 Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 45/265 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
                 LVTGG  G+G A  +R+  +G +V +       G       G       VDVT 
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH--RGSGAP-KGLFG-----VEVDVTD 64

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRILLVN 115
            + V +A    ++  G ++V V+ AG+            +  +       + F++++  N
Sbjct: 65  SDAVDRAFTAVEEHQGPVEVLVSNAGL------------SADAFLMRMTEEKFEKVINAN 112

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             G F VA+ +++ +  NK       G +I   S++   G   Q  Y+ASK+G++GM   
Sbjct: 113 LTGAFRVAQRASRSMQRNK------FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARS 166

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           +AR+L+ A +  N +APG  DT +   L+E+++    + IPA +R+G P E A +V    
Sbjct: 167 IARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLA 225

Query: 233 ----SIITNPLINGEVIRIDGALRM 253
               S I+     G VI +DG + M
Sbjct: 226 SEDASYIS-----GAVIPVDGGMGM 245

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  152 bits (387), Expect = 2e-45
 Identities = 55/284 (19%), Positives = 91/284 (32%), Gaps = 34/284 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL------------ 48
               V LVTG A  LG++  E +  EG  V L    ++    +++  L            
Sbjct: 7   PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 66

Query: 49  ---------GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIF---- 95
                              VT      + V  C   +G+ DV VN A       +     
Sbjct: 67  ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126

Query: 96  ----NYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA 151
                              +   N +  + + +  A  +        G    IIN     
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 186

Query: 152 AYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL 211
             +   G   Y+ +K  + G+T   A +LA   IRVN + PGL        +   V    
Sbjct: 187 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--DDMPPAVWEGH 244

Query: 212 ARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGALRM 253
              +P  QR     E + +V  + ++    I G  +++DG   +
Sbjct: 245 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  150 bits (380), Expect = 8e-45
 Identities = 57/282 (20%), Positives = 104/282 (36%), Gaps = 76/282 (26%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           + +++G A+G+G AT + +   G ++V  D+   + E +A            D+++ E  
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDI--RDAEVIA------------DLSTAEGR 48

Query: 66  QKAVL-LCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
           ++A+  +       +D  V CAG+                      ++ VN  G   +  
Sbjct: 49  KQAIADVLAKCSKGMDGLVLCAGLG-------------PQTKVLGNVVSVNYFGATELMD 95

Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYE----------------------------GQ 156
                +      + G +   +  +S+A+                               Q
Sbjct: 96  AFLPAL------KKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ 149

Query: 157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARS 214
            G +AY+ SK+ +       A     AG+R+NTIAPG  +TPLL     + +    +A+ 
Sbjct: 150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF 209

Query: 215 IPAPQRLGHPDEFAQLVQ-------SIITNPLINGEVIRIDG 249
           +P   R   P E A ++        S +      G  I IDG
Sbjct: 210 VPPMGRRAEPSEMASVIAFLMSPAASYVH-----GAQIVIDG 246

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  150 bits (380), Expect = 9e-45
 Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 45/265 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
                 LVTGG  G+G A        G +V +    T       +           D+T 
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAI----TYRSGEPPEG----FLAVKCDITD 70

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRILLVN 115
            E V++A    +++ G ++V +  AG+            T   L      +DF  ++  N
Sbjct: 71  TEQVEQAYKEIEETHGPVEVLIANAGV------------TKDQLLMRMSEEDFTSVVETN 118

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
             GTF V + + + +   K      +G ++  +S+    G +GQ  Y+ASK+G+VG    
Sbjct: 119 LTGTFRVVKRANRAMLRAK------KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARS 172

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ--- 232
           +AR+L    I  N +APG  DT +  +L ++ R  +   +P   R   P+E A  V+   
Sbjct: 173 LARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPL-GRYARPEEIAATVRFLA 231

Query: 233 ----SIITNPLINGEVIRIDGALRM 253
               S IT     G VI +DG L M
Sbjct: 232 SDDASYIT-----GAVIPVDGGLGM 251

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  148 bits (377), Expect = 2e-44
 Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 26/237 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG V L+TG + G+G+AT   +  +G RV L        +++A EL       P DV  
Sbjct: 4   MKGAV-LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-GALPLPGDVRE 61

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E D  +AV   +++FG+L   VN AG+     +         +L++++ +L  N  G F 
Sbjct: 62  EGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHEL------TLEEWRLVLDTNLTGAFL 115

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             R +   +           G I+N  S+A      G  AY+ASK G++G+      DL 
Sbjct: 116 GIRHAVPALLRRG------GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLR 169

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
            A +RV  + PG  DT              A + P       P++ AQ V   +  P
Sbjct: 170 EANVRVVNVLPGSVDTG------------FAGNTPGQAWKLKPEDVAQAVLFALEMP 214

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  149 bits (378), Expect = 3e-44
 Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 25/256 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           L G    VTGG+ G+G A  +R+  EG  V L  +  +E  ++V  E+   G        
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D    E +++A+    ++ G LD+ VN AGI      ++       ++ DF  ++ VN  
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGI------WHSAPLEETTVADFDEVMAVNFR 142

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTAS-IAAYEGQSGQVAYSASKSGIVGMTLPM 176
             F   R +++ + +         G II   S +A      G   YSASK+ + G+T  +
Sbjct: 143 APFVAIRSASRHLGDG--------GRIITIGSNLAELVPWPGISLYSASKAALAGLTKGL 194

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
           ARDL   GI VN + PG  DT +     +       R I      G P + A LV + + 
Sbjct: 195 ARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRER-IAT-GSYGEPQDIAGLV-AWLA 251

Query: 237 NPL---INGEVIRIDG 249
            P    + G  + IDG
Sbjct: 252 GPQGKFVTGASLTIDG 267

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  148 bits (376), Expect = 5e-44
 Identities = 75/270 (27%), Positives = 119/270 (44%), Gaps = 39/270 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV- 57
           LKG   LVTG  +G+GKA    +V EG  V++            KE+    PD    PV 
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 58  -DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            D+ +E+  Q  +    + + K+D+ +N  GI    + F+         +D+ ++  VN 
Sbjct: 68  ADLGTEQGCQDVI----EKYPKVDILINNLGIFEPVEYFDI------PDEDWFKLFEVNI 117

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           +    + R   + + E K       G +I  AS AA         YSA+K+  + ++  +
Sbjct: 118 MSGVRLTRSYLKKMIERK------EGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSL 171

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSML------------NEKVRNFLARSIPAP--QRLG 222
           A    G  + VNTI PG   T  +  +             E  + F+  + P    QRL 
Sbjct: 172 AELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLI 231

Query: 223 HPDEFAQLVQSIITNPL---INGEVIRIDG 249
            P+E A LV + +++PL   ING  +RIDG
Sbjct: 232 RPEEIAHLV-TFLSSPLSSAINGSALRIDG 260

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  148 bits (375), Expect = 9e-44
 Identities = 72/271 (26%), Positives = 108/271 (39%), Gaps = 41/271 (15%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKE---LGPDVKFAPV 57
           L G V L TG   G+G+     + R G  VV+    +S+  E V  E   LG        
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           D++   +V          FG LD  ++ +G+                 + + F ++  +N
Sbjct: 79  DISKPSEVVALFDKAVSHFGGLDFVMSNSGM--------EVWCDELEVTQELFDKVFNLN 130

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTL 174
           T G F VA+   +             G II T+SIAA   G      Y+ SK+ + G   
Sbjct: 131 TRGQFFVAQQGLKHCRRG--------GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCR 182

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPL-------------LSMLNEKVRNFLARSIPAPQRL 221
             A D    G+ VN IAPG   T +               M  EK+   LA   P  +R+
Sbjct: 183 AFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRI 241

Query: 222 GHPDEFAQLVQSIITNPL---INGEVIRIDG 249
           G+P +  + V S +       ING+VI++ G
Sbjct: 242 GYPADIGRAV-SALCQEESEWINGQVIKLTG 271

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  148 bits (377), Expect = 1e-43
 Identities = 69/285 (24%), Positives = 111/285 (38%), Gaps = 54/285 (18%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS------------EGESVAKE-- 47
           L+G V  +TG A G G+    R+ ++G  +V  DL               E +   +   
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 48  -LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
             G  +     DV     +Q  V      FG +D+ V+  GIS      N  +    +  
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS------NQGEVVSLTDQ 157

Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
            +  IL  N +G ++  R          + E G  G +I  +S     G  GQ  Y+ASK
Sbjct: 158 QWSDILQTNLIGAWHACRAVLP-----SMIERGQGGSVIFVSSTVGLRGAPGQSHYAASK 212

Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDE 226
            G+ G+ L +A ++    IRVN++ PG  +T +   LNEK+       +  P R    ++
Sbjct: 213 HGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMA--LNEKLLKMFLPHLENPTR----ED 266

Query: 227 FAQLVQSIITNPL----------------------INGEVIRIDG 249
            A+L   +   P+                      I+G  I +DG
Sbjct: 267 AAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG 311

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  144 bits (366), Expect = 3e-42
 Identities = 71/275 (25%), Positives = 113/275 (41%), Gaps = 41/275 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           L+G V LVTG   G+G+     + R G +V++    ++E  E V   +   G D      
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
           +V   ED+ +        FGKLD+  + +G+         + G V   + ++F R+  +N
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--------VSFGHVKDVTPEEFDRVFTIN 138

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTL 174
           T G F VAR + + +           G +I   SI    +       YS SK  I     
Sbjct: 139 TRGQFFVAREAYKHLEIG--------GRLILMGSITGQAKAVPKHAVYSGSKGAIETFAR 190

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLN-------------EKVRNFLARSIPAPQRL 221
            MA D+A   I VN +APG   T +   +              E       +  P  +R+
Sbjct: 191 CMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-RRV 249

Query: 222 GHPDEFAQLVQSIITNPL---INGEVIRIDGALRM 253
           G P + A++V   + +     + G+VI IDG   M
Sbjct: 250 GLPIDIARVV-CFLASNDGGWVTGKVIGIDGGACM 283

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  143 bits (363), Expect = 6e-42
 Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 36/268 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           L G V LVTG   G+G A    + R G +VV+    +++  E V  E+   G D      
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D+    ++ K        FG LD+ V+ +G+       ++      + ++F R+  +NT 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV------VSFGHLKDVTEEEFDRVFSLNTR 129

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPM 176
           G F VAR + + + E         G I+ T+S  +          YS SK  +       
Sbjct: 130 GQFFVAREAYRHLTEG--------GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIF 181

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRLGHP 224
           ++D     I VN +APG   T +             S   E+ +   A + P   R G P
Sbjct: 182 SKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWP 240

Query: 225 DEFAQLVQSIITNPL---INGEVIRIDG 249
            + A +V   + +     +NG+V+ +DG
Sbjct: 241 QDVANVV-GFLVSKEGEWVNGKVLTLDG 267

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  143 bits (363), Expect = 7e-42
 Identities = 65/285 (22%), Positives = 105/285 (36%), Gaps = 55/285 (19%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS------------EGESVAKE-- 47
            +G   L+TGGA G+G++    +   G  + +CD   +            +         
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 48  -LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
             G     A VDV     ++  V   +D+ G +D+ +  AGIS                 
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS------TIALLPEVESA 121

Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
            +  ++  N  GTFN     A  + +         G I+  +S+  +     Q +Y +SK
Sbjct: 122 QWDEVIGTNLTGTFNTIAAVAPGMIKRN------YGRIVTVSSMLGHSANFAQASYVSSK 175

Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS---------------MLNEKVRNFL 211
            G++G+T   A DL G GI VN +APG  +TP+                  L +    F 
Sbjct: 176 WGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA 235

Query: 212 ARSIPAPQRLGHPDEFAQLVQ-------SIITNPLINGEVIRIDG 249
           +  +        P+E  + V        S IT     G V+ ID 
Sbjct: 236 SLHLQ-YAPFLKPEEVTRAVLFLVDEASSHIT-----GTVLPIDA 274

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  141 bits (358), Expect = 2e-41
 Identities = 54/248 (21%), Positives = 94/248 (37%), Gaps = 25/248 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           LK  + +VTG   G+G   V+ + R    V           ++A+  G  V+    D+  
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEG--VEPIESDIVK 59

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E   +  V   K+    +D  V+ A ++    I         S+ ++   L +N +    
Sbjct: 60  EVLEEGGVDKLKN-LDHVDTLVHAAAVARDTTIEAG------SVAEWHAHLDLNVIVPAE 112

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           ++R     +           G +I   S A      G   Y+ASK  + G+     ++ A
Sbjct: 113 LSRQLLPALRAA-------SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEA 165

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL-- 239
             GIRV+T++PG  +TP+L  L +         I        P E A  ++ +I      
Sbjct: 166 NNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIY-----IEPKEIANAIRFVIDAGETT 220

Query: 240 -INGEVIR 246
            I    +R
Sbjct: 221 QITNVDVR 228

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  145 bits (369), Expect = 3e-41
 Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 34/264 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V +VTG A G+G    E   R+G  VV  D+  +  +              +DVT+
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTA 270

Query: 62  EEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSL------DDFKRILLV 114
           ++ V K      +  G K+D+ VN AGI            T   L        +  ++ V
Sbjct: 271 DDAVDKITAHVTEHHGGKVDILVNNAGI------------TRDKLLANMDEKRWDAVIAV 318

Query: 115 NTVGTFNVAR--LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
           N +    +    +    I E         G +I  +S+A   G  GQ  Y+ +K+G++G+
Sbjct: 319 NLLAPQRLTEGLVGNGTIGEG--------GRVIGLSSMAGIAGNRGQTNYATTKAGMIGL 370

Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
              +A  LA  GI +N +APG  +T +   +    R    R      + G P + A+L+ 
Sbjct: 371 AEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSL-FQGGQPVDVAELI- 428

Query: 233 SIITNPL---INGEVIRIDGALRM 253
           +   +P    + G  IR+ G   +
Sbjct: 429 AYFASPASNAVTGNTIRVCGQAML 452

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  140 bits (356), Expect = 4e-41
 Identities = 65/271 (23%), Positives = 106/271 (39%), Gaps = 37/271 (13%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-----SEGESVAKE---LGPDV 52
           MLKG V LVTG + G+G+A  +R+  +G  V +           E E    E    G   
Sbjct: 4   MLKGKVALVTGASRGIGRAIAKRLANDGALVAI----HYGNRKEEAEETVYEIQSNGGSA 59

Query: 53  KFAPVDVTSEEDVQKAV------LLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
                ++ S   V+         L  +    K D+ +N AGI     I         +  
Sbjct: 60  FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI------EETTEQ 113

Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
            F R++ VN    F + + +   + +N          IIN +S A        +AYS +K
Sbjct: 114 FFDRMVSVNAKAPFFIIQQALSRLRDN--------SRIINISSAATRISLPDFIAYSMTK 165

Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHP 224
             I  MT  +A+ L   GI VN I PG   T + + L  +  ++ +         RLG  
Sbjct: 166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF-NRLGEV 224

Query: 225 DEFAQLVQSIITNPL--INGEVIRIDGALRM 253
           ++ A     + +     + G++I + G   +
Sbjct: 225 EDIADTAAFLASPDSRWVTGQLIDVSGGSCL 255

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  140 bits (356), Expect = 5e-41
 Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 30/243 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           + G + L+TG   G+G+ T     +   ++VL D+     E  A +    G  V    VD
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 88

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
            ++ ED+  +    K   G + + VN AG+     +F             ++   VN + 
Sbjct: 89  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFA------TQDPQIEKTFEVNVLA 142

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F   +     + +N        G I+  AS A +      +AY +SK   VG    +  
Sbjct: 143 HFWTTKAFLPAMTKNN------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTD 196

Query: 179 DLAGA---GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQ-LVQSI 234
           +LA     G++   + P   +T  +    +     L  ++        P+E    L+  I
Sbjct: 197 ELAALQITGVKTTCLCPNFVNTGFI----KNPSTSLGPTLE-------PEEVVNRLMHGI 245

Query: 235 ITN 237
           +T 
Sbjct: 246 LTE 248

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  135 bits (342), Expect = 4e-39
 Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 42/262 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           ++    LV   + G+G+A  + + +EG  V +C    +  E + K  G   ++   D+  
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTIC----ARNEELLKRSG--HRYVVCDLRK 70

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGT 119
           + D    +    +   ++D+ V  AG   A        G     + +DFK  +    +  
Sbjct: 71  DLD---LLF---EKVKEVDILVLNAGGPKA--------GFFDELTNEDFKEAIDSLFLNM 116

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
             + R     + E         G I+   S +           ++++  + G    ++ +
Sbjct: 117 IKIVRNYLPAMKEKG------WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFE 170

Query: 180 LAGAGIRVNTIAPGLFDTP-LLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ------ 232
           +A  GI VN +APG  +T  +  +L+E+ +  +   IP  +R+  P+E A +V       
Sbjct: 171 VAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEK 229

Query: 233 -SIITNPLINGEVIRIDGALRM 253
            S +T     G+ I +DG L  
Sbjct: 230 ASYLT-----GQTIVVDGGLSK 246

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  135 bits (342), Expect = 3e-38
 Identities = 55/265 (20%), Positives = 91/265 (34%), Gaps = 36/265 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-------ESVAKE---LGPD 51
           L G    +TG + G+GKA   +  ++G  +V+                + A+E   +G  
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102

Query: 52  VKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRI 111
                VDV  E+ +  AV      FG +D+ VN A         +              +
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDT------PTKRLDLM 156

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--SGQVAYSASKSGI 169
           + VNT GT+  ++     + ++K         I+N +              AY+ +K G+
Sbjct: 157 MNVNTRGTYLASKACIPYLKKSK------VAHILNISPPLNLNPVWFKQHCAYTIAKYGM 210

Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLF-DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
               L MA +  G  I VN + P     T  + ML                +    D  A
Sbjct: 211 SMYVLGMAEEFKG-EIAVNALWPKTAIHTAAMDMLGGPG---------IESQCRKVDIIA 260

Query: 229 QLVQSIITNP-LINGEVIRIDGALR 252
               SI   P    G  +  +  L+
Sbjct: 261 DAAYSIFQKPKSFTGNFVIDENILK 285

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  129 bits (327), Expect = 2e-36
 Identities = 39/237 (16%), Positives = 83/237 (35%), Gaps = 28/237 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAP 56
           ML+G   +VTG + G+G+     + + G  VV+        + V             +  
Sbjct: 25  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 84

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
             +      ++ V       G LD+ +     + +  +F+        +   ++ + VN 
Sbjct: 85  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDIHHVRKSMEVNF 138

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           +    +   +  ++ ++        G I+  +S+A         AYSASK  + G    +
Sbjct: 139 LSYVVLTVAALPMLKQSN-------GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSI 191

Query: 177 ARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
            ++ +     + +     GL DT        K  + +     AP      +E A  +
Sbjct: 192 RKEYSVSRVNVSITLCVLGLIDTETA----MKAVSGIVHMQAAP-----KEECALEI 239

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  126 bits (319), Expect = 3e-36
 Identities = 40/241 (16%), Positives = 82/241 (34%), Gaps = 47/241 (19%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           L+ G +  LG A  ER+  +   V+                G       VD+T+ + ++K
Sbjct: 7   LLIGASGTLGSAVKERL-EKKAEVITA--------------GRHSGDVTVDITNIDSIKK 51

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
                 +  GK+D  V+  G +    +         + +     +     G  N+  L  
Sbjct: 52  MY----EQVGKVDAIVSATGSATFSPLTEL------TPEKNAVTISSKLGGQINLVLLGI 101

Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
             +++         G    T  I   +      + + +   +       A ++   GIR+
Sbjct: 102 DSLNDK--------GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRI 152

Query: 188 NTIAPGLFDTPLLSMLNEKVRNFLARSIPAP-QRLGHPDEFAQLVQSIITNPLINGEVIR 246
           NT++P + +        +K+  F    +P P  ++     F + V    T     GE  +
Sbjct: 153 NTVSPNVLEESW-----DKLEPFFEGFLPVPAAKVARA--FEKSVFGAQT-----GESYQ 200

Query: 247 I 247
           +
Sbjct: 201 V 201

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  126 bits (319), Expect = 4e-36
 Identities = 39/233 (16%), Positives = 74/233 (31%), Gaps = 39/233 (16%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           L+TG   GLG A       +G  ++L          +A+E+G      P D+  E + + 
Sbjct: 4   LITGATGGLGGAFARA--LKGHDLLLSGRRAGALAELAREVGARA--LPADLADELEAKA 59

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTFNVARL 125
            +    +  G LD+ V+  G +           +V     D  + +L  + +    V + 
Sbjct: 60  LL----EEAGPLDLLVHAVGKAGR--------ASVREAGRDLVEEMLAAHLLTAAFVLKH 107

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
                              +   +   Y    G  AY+A+K  +        ++L   G+
Sbjct: 108 ---------ARFQK-GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGV 157

Query: 186 RVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
            +  +      T              A     P+    P+E A+ V   +   
Sbjct: 158 HLVLVRLPAVATG-----------LWAPLGGPPKGALSPEEAARKVLEGLFRE 199

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  127 bits (320), Expect = 7e-36
 Identities = 48/266 (18%), Positives = 98/266 (36%), Gaps = 30/266 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVE---RIVREGGRVVLCDLPTSEGESVAKEL-----GPDVK 53
           L   V ++TG + G G+A      R++  G  +++     S    + +EL        V 
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

Query: 54  FAPVDVTSEEDVQKAV----LLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDD 107
            A  D+ +E  VQ+ +     L +    +  + +N A       + + +KG ++   L +
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAAT-----LGDVSKGFLNVNDLAE 118

Query: 108 FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKS 167
                 +N      +   +     ++     GL   ++N +S+ A +   G   Y A K+
Sbjct: 119 VNNYWALNLTSMLCLTSGTLNAFQDSP----GLSKTVVNISSLCALQPYKGWGLYCAGKA 174

Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ----RLGH 223
               +   +A +     +RV + APG  D  +  +  E  ++   RS          L  
Sbjct: 175 ARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD 232

Query: 224 PDEFAQLVQSIITNP-LINGEVIRID 248
               AQ +  ++      +G  +   
Sbjct: 233 CGTSAQKLLGLLQKDTFQSGAHVDFY 258

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  128 bits (323), Expect = 1e-35
 Identities = 71/264 (26%), Positives = 112/264 (42%), Gaps = 26/264 (9%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG----------ESVAKE--- 47
           ++ G V +VTG   G+G+A       EG RVV+ D+               +SV  E   
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 48  LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD 107
            G +      +V   +     +    ++FG LDV VN AGI     I N       S ++
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANT------SEEE 137

Query: 108 FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKS 167
           F  ++ V+  G F   R +A            + G IINT+S A  +G  GQ  YSA+K+
Sbjct: 138 FDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKA 197

Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEF 227
           GI  +TL  A ++   G+ VN IAP        + + E V   +  +         P+  
Sbjct: 198 GIATLTLVGAAEMGRYGVTVNAIAPS-----ARTRMTETVFAEMMATQDQDFDAMAPENV 252

Query: 228 AQLVQSIIT--NPLINGEVIRIDG 249
           + LV  + +     + G+V  ++G
Sbjct: 253 SPLVVWLGSAEARDVTGKVFEVEG 276

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  125 bits (317), Expect = 2e-35
 Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 26/245 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G V L+TG +SG+G+AT   +  EG  V +      +  ++  EL   G  V    +D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V   + V  AV    ++ G LD+ VN AGI     + + +        D+ R++  N +G
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDAD------TTDWTRMIDTNLLG 118

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
              + R +   +  +K       G ++  +SIA          Y A+K G+   +  + +
Sbjct: 119 LMYMTRAALPHLLRSK-------GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQ 171

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLN-----EKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
           ++   G+RV  I PG  DT L   +      E     +++            + A+ V+ 
Sbjct: 172 EVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQ-----AQDIAEAVRY 226

Query: 234 IITNP 238
            +T P
Sbjct: 227 AVTAP 231

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  121 bits (307), Expect = 4e-34
 Identities = 40/202 (19%), Positives = 79/202 (39%), Gaps = 23/202 (11%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTS 61
           V ++TG + G+G+A    + R+G  + L        E +A EL    G +V +  +DV+ 
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            E V++      + FG +DV V  AG+    ++         S ++F  ++ VN +G + 
Sbjct: 64  AESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEEL------SEEEFHEMIEVNLLGVWR 117

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIA--AYEGQSGQVAYSASKSGIVGMTLPMARD 179
             +     +             ++ T+ ++        G   Y ++K     +      +
Sbjct: 118 TLKAFLDSLKRTG------GLALVTTSDVSARLIPYGGG---YVSTKWAARALVRTFQIE 168

Query: 180 LAGAGIRVNTIAPGLFDTPLLS 201
                +R   + PG  DT    
Sbjct: 169 --NPDVRFFELRPGAVDTYFGG 188

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  120 bits (304), Expect = 3e-33
 Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 17/205 (8%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV 57
           M+   V L+TG + G+G+     +   G +++L     +  E++A E+   G       +
Sbjct: 1   MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL 60

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DVT    V        D++G++DV VN AG+     +          +D+++R++ VN  
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVK------VDEWERMIDVNIK 114

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G          ++   +       G IIN  SI A         Y A+K  +  ++  + 
Sbjct: 115 GVLWGIGAVLPIMEAQR------SGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLR 168

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSM 202
           ++     IRV  + PG+ ++ L   
Sbjct: 169 QE--STNIRVTCVNPGVVESELAGT 191

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  120 bits (303), Expect = 8e-33
 Identities = 61/201 (30%), Positives = 85/201 (42%), Gaps = 21/201 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG---------ESVAKELGPDV 52
             G V LVTG   GLG+A        G  VV+ DL              + V +E+    
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
             A  +  S E  +K V    D+FG++DV VN AGI               S +D+  I 
Sbjct: 67  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSR------ISDEDWDIIQ 120

Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
            V+  G+F V R +   + +         G II TAS +   G  GQ  YSA+K G++G+
Sbjct: 121 RVHLRGSFQVTRAAWDHMKKQN------YGRIIMTASASGIYGNFGQANYSAAKLGLLGL 174

Query: 173 TLPMARDLAGAGIRVNTIAPG 193
              +  +     I  NTIAP 
Sbjct: 175 ANTLVIEGRKNNIHCNTIAPN 195

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  118 bits (298), Expect = 1e-32
 Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 15/199 (7%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           + LVTG  +G G+    R +++G +V+         + +  ELG ++  A +DV +   +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTFNVA 123
           ++ +      +  +D+ VN AG++             H  S++D++ ++  N  G   + 
Sbjct: 62  EEMLASLPAEWCNIDILVNNAGLA-------LGMEPAHKASVEDWETMIDTNNKGLVYMT 114

Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
           R     + E         G IIN  S A     +G   Y A+K+ +   +L +  DL G 
Sbjct: 115 RAVLPGMVERN------HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGT 168

Query: 184 GIRVNTIAPGLFDTPLLSM 202
            +RV  I PGL      S 
Sbjct: 169 AVRVTDIEPGLVGGTEFSN 187

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  116 bits (294), Expect = 3e-32
 Identities = 45/242 (18%), Positives = 86/242 (35%), Gaps = 30/242 (12%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           ++TG +SGLG    +    EG    L     S+  +V   L  +V +   D+ S ++V++
Sbjct: 5   VITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQ 64

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTVGTFNVARL 125
                +         V+ AG            G +     +  + ++  N     NV R 
Sbjct: 65  LF---EQLDSIPSTVVHSAGSGYF--------GLLQEQDPEQIQTLIENNLSSAINVLRE 113

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
             +   +           ++   S AA + ++ +  Y A K  + G+   +  +L G  +
Sbjct: 114 LVKRYKDQP-------VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPM 166

Query: 186 RVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVI 245
           ++  + PG   T       E     L  S          ++ A ++   + N   NG V 
Sbjct: 167 KIIAVYPGGMATEFW----ETSGKSLDTSSFMS-----AEDAALMIHGALANIG-NGYVS 216

Query: 246 RI 247
            I
Sbjct: 217 DI 218

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  116 bits (293), Expect = 9e-32
 Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 15/201 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
               + ++TG +SG+G+A   R   EG  ++L        +++      +   A VDVT 
Sbjct: 14  SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP---NTLCAQVDVTD 70

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           +     A+   +  +G  D  VN AG+    +I           ++++R+  VN +G  N
Sbjct: 71  KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQE------ANEWQRMFDVNVLGLLN 124

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     +           G IIN +SIA  +      AY  +K  +  ++  +  ++A
Sbjct: 125 GMQAVLAPMKARN------CGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVA 178

Query: 182 GAGIRVNTIAPGLFDTPLLSM 202
            + +RV TIAP    T LLS 
Sbjct: 179 ASNVRVMTIAPSAVKTELLSH 199

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  120 bits (304), Expect = 2e-31
 Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 21/201 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG---------ESVAKELGPDV 52
            K  V ++TG   GLGK       + G +VV+ DL  +           + V  E+  + 
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
             A  D  +  D  K V     +FG + V +N AGI     +         +  D+K ++
Sbjct: 66  GVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKK------MTEKDYKLVI 119

Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
            V+  G F V + +     + K       G I+NT+S A   G  GQ  Y+++KS ++G 
Sbjct: 120 DVHLNGAFAVTKAAWPYFQKQK------YGRIVNTSSPAGLYGNFGQANYASAKSALLGF 173

Query: 173 TLPMARDLAGAGIRVNTIAPG 193
              +A++ A   I+ N IAP 
Sbjct: 174 AETLAKEGAKYNIKANAIAPL 194

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  110 bits (276), Expect = 9e-28
 Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 19/196 (9%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPV 57
            LK  V L+TG  +GLGK   +   + G +VV+ D    +      E    G +      
Sbjct: 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDF--KDATKTVDEIKAAGGEAWPDQH 376

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV   +D +  +    D +G +D+ VN AGI               S  ++  +  V+ +
Sbjct: 377 DVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAK------MSKQEWDSVQQVHLI 428

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           GTFN++RL+     E +       G IIN  S +   G  GQ  YS+SK+GI+G++  MA
Sbjct: 429 GTFNLSRLAWPYFVEKQ------FGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMA 482

Query: 178 RDLAGAGIRVNTIAPG 193
            + A   I+VN +AP 
Sbjct: 483 IEGAKNNIKVNIVAPH 498

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  116 bits (292), Expect = 2e-31
 Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 21/210 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPV- 57
            +  + LVTG + G+G A    +V++G +VV C       E +A E    G      P  
Sbjct: 30  WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 89

Query: 58  -DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            D+++EED+       +     +D+ +N AG++    + + +         +K +  VN 
Sbjct: 90  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGS------TSGWKDMFNVNV 143

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA---AYEGQSGQVAYSASKSGIVGMT 173
           +      R + Q + E  ++     G IIN  S++             YSA+K  +  +T
Sbjct: 144 LALSICTREAYQSMKERNVD----DGHIININSMSGHRVLPLSVTHF-YSATKYAVTALT 198

Query: 174 LPMARDLAGAG--IRVNTIAPGLFDTPLLS 201
             + ++L  A   IR   I+PG+ +T    
Sbjct: 199 EGLRQELREAQTHIRATCISPGVVETQFAF 228

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  112 bits (282), Expect = 4e-30
 Identities = 49/202 (24%), Positives = 77/202 (38%), Gaps = 16/202 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPV--DV 59
                  +TG  SG G+A   R    G  +VL        +++A EL    +  P+  DV
Sbjct: 19  HMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDV 78

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVNTV 117
                +  AV    + F  L   +N AG++                 LDD+  ++  N  
Sbjct: 79  RDRAAMSAAVDNLPEEFATLRGLINNAGLA-------LGTDPAQSCDLDDWDTMVDTNIK 131

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G     R    L    +L   G    I+N  S+A      G   Y  +K+ +   +L + 
Sbjct: 132 GLLYSTR--LLL---PRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLR 186

Query: 178 RDLAGAGIRVNTIAPGLFDTPL 199
            DL G G+RV  + PGL ++  
Sbjct: 187 CDLQGTGVRVTNLEPGLCESEF 208

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  116 bits (292), Expect = 8e-30
 Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 21/201 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG---------ESVAKELGPDV 52
             G V +VTG  +GLG+         G +VV+ DL  +           + V  E+    
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
             A  D  S  D  K +     +FG++D+ VN AGI     +         S  D+  + 
Sbjct: 77  GEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVK------TSEQDWNLVN 130

Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
            V+  G+F   + +   + +         G II T+S +   G  GQV Y+A+K G++G+
Sbjct: 131 DVHLKGSFKCTQAAFPYMKKQN------YGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGL 184

Query: 173 TLPMARDLAGAGIRVNTIAPG 193
              +A + A   +  N I P 
Sbjct: 185 ANTVAIEGARNNVLCNVIVPT 205

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  111 bits (279), Expect = 2e-29
 Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 16/196 (8%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTG +SG G+A  E  V  G  V+     T   + +        +   +DVT  E +  
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDV 68

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVNTVGTFNVARL 125
                   +G++DV VN AG +          G     +  + + +  ++  G   + R 
Sbjct: 69  VAADVLARYGRVDVLVNNAGRTQV--------GAFEETTERELRDLFELHVFGPARLTRA 120

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
               + E         G ++N +S       +G  AYSA+K+ +  ++  +A ++A  GI
Sbjct: 121 LLPQMRERG------SGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGI 174

Query: 186 RVNTIAPGLFDTPLLS 201
           +V  + PG F T L  
Sbjct: 175 KVLIVEPGAFRTNLFG 190

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  110 bits (277), Expect = 4e-29
 Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 23/208 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGG---RVVLCDLPTSEGESVAKEL-----GPDVK 53
           L     L+TG ++G+GKAT    +       +++L      + E + K +        V 
Sbjct: 31  LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90

Query: 54  FAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRI 111
            A +D+T  E ++  +      F  +D+ VN AG +            V   + +D + +
Sbjct: 91  VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKA-------LGSDRVGQIATEDIQDV 143

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVG 171
              N     N+ +    +            G I+N  SIA  +       Y ASK  +  
Sbjct: 144 FDTNVTALINITQAVLPIFQAKN------SGDIVNLGSIAGRDAYPTGSIYCASKFAVGA 197

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTPL 199
            T  + ++L    IRV  IAPGL +T  
Sbjct: 198 FTDSLRKELINTKIRVILIAPGLVETEF 225

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  107 bits (268), Expect = 1e-27
 Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 34/228 (14%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVV--------LCDLPTSEGESVAKELGPDV 52
           M K ++ L+TG +SG G+ T E +   G RV                     A++   D+
Sbjct: 3   MSKKII-LITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDL 61

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKR 110
           +   +DV S+  V +A+       G++DV ++ AG            G     + + F  
Sbjct: 62  RTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVF--------GPAEAFTPEQFAE 113

Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLR----GVIINTASIAAYEGQSGQVA-YSAS 165
           +  +N + T  V R  A L H        +R    G++I  +S ++  G    +A Y A+
Sbjct: 114 LYDINVLSTQRVNR--AALPH--------MRRQKHGLLIWISSSSSAGGTPPYLAPYFAA 163

Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR 213
           K+ +  + +  AR+L+  GI  + I PG F +      +  V +  AR
Sbjct: 164 KAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHAR 211

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 97.0 bits (242), Expect = 2e-24
 Identities = 46/213 (21%), Positives = 74/213 (34%), Gaps = 22/213 (10%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVD 58
           M  G V +VTG   G+G   V+++V++     ++       +   +       V   P+ 
Sbjct: 1   MSPGSV-VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLT 59

Query: 59  VTSEEDVQKAVLLCKDSFG--KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           VT ++ +   V    +  G   L + +N AG+       +Y   T  +       L VNT
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVL-----LSYGTNTEPNRAVIAEQLDVNT 114

Query: 117 VGTFNVAR-----LSAQLIHENKLNEDGLRGVIIN----TASIAAYEGQSGQV---AYSA 164
                + +     L      E+       R  +I       SI      S Q    AY  
Sbjct: 115 TSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRM 174

Query: 165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT 197
           SK+ I      +A DL    + V    PG   T
Sbjct: 175 SKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT 207

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 92.4 bits (230), Expect = 1e-22
 Identities = 42/206 (20%), Positives = 69/206 (33%), Gaps = 22/206 (10%)

Query: 8   LVTGGASGLGKATVERIV---REGGRVVLC--DLPTSEGESVAKELGPDVKFAPVDVTSE 62
           L+TG   GLG   V+ ++   +    +     +   ++      +   ++    +D+ + 
Sbjct: 25  LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNF 84

Query: 63  EDVQKAVLLCKDSFG--KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           +   K V   +       L+V  N AGI+            V    +    L  NTV   
Sbjct: 85  DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARI----TAV-RSQELLDTLQTNTVVPI 139

Query: 121 NVAR-----LSAQLIHENKLNEDGLRGVIINT----ASIAAYEGQSGQVAYSASKSGIVG 171
            +A+     L               R  IIN      SI       G  AY  SKS +  
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTD-GGMYAYRTSKSALNA 198

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDT 197
            T  ++ DL    I   ++ PG   T
Sbjct: 199 ATKSLSVDLYPQRIMCVSLHPGWVKT 224

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 91.9 bits (228), Expect = 5e-22
 Identities = 50/265 (18%), Positives = 87/265 (32%), Gaps = 68/265 (25%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAP 56
           + K    +VTGG  G+G    +++   G  VVL     ++G    ++L      +V F  
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 57  VDVTSEED-VQKAVLLCKDSFGKLDVNVNCAGISC------------------------A 91
           +DVT     +       K  FGKLD+ VN AG++                          
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 92  FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL-------------------------- 125
           ++     +    + +  +  L +N  G  +V  +                          
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188

Query: 126 -----SAQLIHENKLNEDGLRGVI------INTASIAAYEGQSGQVAYSASKSGIVGMTL 174
                   L   + L E+ +  V+           I      S   AY+ SK+ +   T 
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 175 PMARDLAGAGIRVNTIAPGLFDTPL 199
            +A  +     +VN + PGL  T +
Sbjct: 249 VLANKI--PKFQVNCVCPGLVKTEM 271

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 88.6 bits (220), Expect = 4e-21
 Identities = 54/237 (22%), Positives = 88/237 (37%), Gaps = 51/237 (21%)

Query: 6   VGLVTGGASGLGKATVERIV-REGGRVVL-C-DLPTSEGESVAKEL---GPDVKFAPVDV 59
           V LVTGG  G+G A V  +     G VVL   D+  + G++  ++L   G   +F  +D+
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV--TRGQAAVQQLQAEGLSPRFHQLDI 63

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
              + ++      +  +G LDV VN AGI  AFK+ +            +  +  N  GT
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGI--AFKVADPTP----FHIQAEVTMKTNFFGT 117

Query: 120 FNVARL-----------------------------SAQLIHENKLNEDGLRGV----IIN 146
            +V                                  Q      + E+ L G+    + +
Sbjct: 118 RDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177

Query: 147 TASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA----GAGIRVNTIAPGLFDTPL 199
           T      +      AY  +K G+  ++   AR L+    G  I +N   PG   T +
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 85.9 bits (213), Expect = 9e-20
 Identities = 46/225 (20%), Positives = 81/225 (36%), Gaps = 38/225 (16%)

Query: 8   LVTGGASGLGKATVERIVRE---GGRVV-----LCDLPTSEGESVAKELGPD-VKFAPVD 58
           L+TG +SG+G     R+  +     +V      L         + A    P  ++   +D
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 65

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVNT 116
           V   + V  A     +  G++DV V  AG+           G +     D    +L VN 
Sbjct: 66  VRDSKSVAAARERVTE--GRVDVLVCNAGLGLL--------GPLEALGEDAVASVLDVNV 115

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           VGT  + +     +           G ++ T S+    G      Y ASK  + G+   +
Sbjct: 116 VGTVRMLQAFLPDMKRRG------SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESL 169

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
           A  L   G+ ++ I  G   T            F+ + + +P+ +
Sbjct: 170 AVLLLPFGVHLSLIECGPVHT-----------AFMEKVLGSPEEV 203

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 80.0 bits (198), Expect = 7e-18
 Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 39/233 (16%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
                 ++TG  SGLG  T   + R G  V++    T +GE+ A+ +   V+   +D+  
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQD 73

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGI-SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
              V++      D     DV +N AGI +  +           ++D F+  +  N +G F
Sbjct: 74  LSSVRRFA----DGVSGADVLINNAGIMAVPYA---------LTVDGFESQIGTNHLGHF 120

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-------------SGQVAYSASKS 167
               L+  L+         L   ++  +S+A + G+             S  +AYS SK 
Sbjct: 121 ---ALTNLLL-------PRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKL 170

Query: 168 GIVGMTLPMARDLAGAGIRVNTIA--PGLFDTPLLSMLNEKVRNFLARSIPAP 218
             +  T  + R L  AG  +  +A  PG   T L      K+ + L  +    
Sbjct: 171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRV 223

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 64.5 bits (157), Expect = 2e-12
 Identities = 21/173 (12%), Positives = 48/173 (27%), Gaps = 25/173 (14%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDV 59
           +KG   +V  G   +G  +   +  EG  VVLC     + ++ A  +     V     + 
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
             +    +AV                  I     +    +    +    + +   N    
Sbjct: 177 ADDASRAEAV-------KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPP 225

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
             +  + A        ++    G      ++       G +     ++ I  +
Sbjct: 226 LGIGGIDAT-------DKGKEYGGKRAFGALGI-----GGLKLKLHRACIAKL 266

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 48/260 (18%), Positives = 78/260 (30%), Gaps = 75/260 (28%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           LVTG A  LG+   ER+      + L DL   +        GP+ +    D+     V  
Sbjct: 7   LVTGAAGQLGRVMRERLAPMAEILRLADLSPLD------PAGPNEECVQCDLADANAVNA 60

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
                       D  V+  GIS                  F++IL  N +G +N+    A
Sbjct: 61  M-------VAGCDGIVHLGGIS--------------VEKPFEQILQGNIIGLYNL--YEA 97

Query: 128 QLIHENKLNEDGLRGV--IINTASIAAYEGQSGQVA-------------YSASKSGIVGM 172
              H          G   I+  +S     G   Q               Y  SK     +
Sbjct: 98  ARAH----------GQPRIVFASSNHTI-GYYPQTERLGPDVPARPDGLYGVSKCFGENL 146

Query: 173 TLPMAR--DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
                       A +R+ +  P   +  +LS        +              D+F  L
Sbjct: 147 ARMYFDKFGQETALVRIGSCTPEPNNYRMLST-------WF-----------SHDDFVSL 188

Query: 231 VQSIITNPLINGEVIRIDGA 250
           ++++   P++   V+    A
Sbjct: 189 IEAVFRAPVLGCPVVWGASA 208

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 48.1 bits (115), Expect = 9e-07
 Identities = 29/173 (16%), Positives = 61/173 (35%), Gaps = 48/173 (27%)

Query: 8   LVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           LVTG +  +G   V  +  + G   V+  D+   +           +KF  +DV++ +++
Sbjct: 3   LVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD--------TGGIKFITLDVSNRDEI 54

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
            +AV         +D   + AGI            +     D      VN  GT+N+   
Sbjct: 55  DRAV-----EKYSIDAIFHLAGIL-----------SAKGEKDPALAYKVNMNGTYNILEA 98

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA------------YSASK 166
           +          +  +  V+I  ++I  +  ++ +              +  +K
Sbjct: 99  AK---------QHRVEKVVI-PSTIGVFGPETPKNKVPSITITRPRTMFGVTK 141

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 30/159 (18%), Positives = 46/159 (28%), Gaps = 51/159 (32%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKELGPDVKFAPVDV 59
           ML  +  LVTG A G+G A    +      V L D +     E          +    D+
Sbjct: 1   MLNRL--LVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE-------AHEEIVACDL 51

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
              + V              D  ++  G+S                +D   IL  N +G 
Sbjct: 52  ADAQAVHDL-------VKDCDGIIHLGGVS-----------VERPWND---ILQANIIGA 90

Query: 120 FNV---ARLSAQLIHENKLNEDGLRGV--IINTASIAAY 153
           +N+   AR                 G   I+  +S    
Sbjct: 91  YNLYEAARNL---------------GKPRIVFASSNHTI 114

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 21/117 (17%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLC--DLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           +V GGA  +G   V+R++  G   V    +L ++E  +V     P V+F+   +T +  +
Sbjct: 36  MVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDH--PAVRFSETSITDDALL 93

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
                       + D   + A             G   S+ D       NT+ T  +
Sbjct: 94  ASL-------QDEYDYVFHLATYH----------GNQSSIHDPLADHENNTLTTLKL 133

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 3e-06
 Identities = 53/341 (15%), Positives = 98/341 (28%), Gaps = 127/341 (37%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRV----VLCDLPTSEGESVAKE-----LGPD 51
           M K +          L K  ++ I+     V     L     S+ E + ++     L  +
Sbjct: 41  MPKSI----------LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN 90

Query: 52  ---------------------------------VKFAPVDVTSEEDV---QKAVLLCKDS 75
                                              FA  +V+  +     ++A+L  + +
Sbjct: 91  YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA 150

Query: 76  ----------FGK--LDVNVNCA--GISCA--FKIFNYNKGTVHSLDDFKRIL--LVNTV 117
                      GK  + ++V C    + C   FKIF  N    +S +    +L  L+  +
Sbjct: 151 KNVLIDGVLGSGKTWVALDV-CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209

Query: 118 GTFNVARLSA-----QLIHENK-------LNEDGLRGVII-----NTASIAAYEGQSGQV 160
                +R          IH  +        ++     +++     N  +  A+       
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS---- 265

Query: 161 AYSASKSGIVGMTLPMARD------LAGAG---IRVNTIAPGLFDTPLLSMLNEKVRNFL 211
                K       L   R       L+ A    I ++  +  L    + S+L  K  +  
Sbjct: 266 ----CK------ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL-LKYLDCR 314

Query: 212 ARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR 252
            + +P      +P        SII       E IR DG   
Sbjct: 315 PQDLPREVLTTNP-----RRLSII------AESIR-DGLAT 343

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 21/148 (14%), Positives = 39/148 (26%), Gaps = 36/148 (24%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
            V G    LG      I   G  +VL   P+S+ + +A     + +    ++     +++
Sbjct: 17  AVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA---YLEPECRVAEMLDHAGLER 73

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
           A+          D  +  AG                    ++  +      T        
Sbjct: 74  ALRGL-------DGVIFSAGY------------YPSRPRRWQEEVASALGQTNPFYAACL 114

Query: 128 QLIHENKLNEDGLRGV--IINTASIAAY 153
           Q              V  I+   S  A 
Sbjct: 115 Q------------ARVPRILYVGSAYAM 130

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 41.3 bits (96), Expect = 2e-04
 Identities = 41/295 (13%), Positives = 80/295 (27%), Gaps = 53/295 (17%)

Query: 7   GLVTGGASGLGKAT-VERIVREGGRVVLCDLPTSEGES---------------VAKELGP 50
            LV G +SG G A+ +      G   +          S                AK  G 
Sbjct: 64  VLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGL 123

Query: 51  DVKFAPVDVTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK 109
             K    D  S+    + + L K   G ++D+ V     S A  +              K
Sbjct: 124 YSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVY----SLASPVRKLPGSGEVKRSALK 179

Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGL---------------------RGVIINTA 148
            I    T    +  + +         +   +                      GV+ + A
Sbjct: 180 PIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGA 239

Query: 149 SIAAYEGQSGQVAYSASKSGIVGM--------TLPMARDLAGAGIRVNTIAPGLFDTPLL 200
              A+     ++ +     G +G            +   LA  G   N        T   
Sbjct: 240 RSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS 299

Query: 201 SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL--INGEVIRIDGALRM 253
           + +   +  +++      +  G  +   + +  +    L   +G+   +D   R+
Sbjct: 300 AAI-PVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQNRL 353

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 40/211 (18%), Positives = 71/211 (33%), Gaps = 42/211 (19%)

Query: 2   LKGVVGLVTGGAS------GLGKATVERIVREGGRVVLCDLPTSEGESV---AKELGPDV 52
           L+    ++ G A+      G+ K     + + G ++V         + +    ++L    
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKV----LDQLGAKLVFTYRKERSRKELEKLLEQLNQPE 85

Query: 53  KF-APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFK 109
                +DV S+E+V           G +D   +      AF      +G     S + F 
Sbjct: 86  AHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSI----AFANMEDLRGRFSETSREGFL 141

Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA--YEGQSGQVA--Y--- 162
               +++     VA  + +L+ E                SI A  Y G        Y   
Sbjct: 142 LAQDISSYSLTIVAHEAKKLMPEG--------------GSIVATTYLG-GEFAVQNYNVM 186

Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
             +K+ +      +A DL    IRVN I+ G
Sbjct: 187 GVAKASLEANVKYLALDLGPDNIRVNAISAG 217

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 38/209 (18%)

Query: 1   MLKGVVGLVTGGAS------GLGKATVERIVREGGRVVLCDLPTSEGESV---AKELGPD 51
           +L+G  GL+ G A+      G+ KA        G  +       +  + V   A+ELG  
Sbjct: 28  LLQGKRGLILGVANNRSIAWGIAKA----AREAGAELAFTYQGDALKKRVEPLAEELGAF 83

Query: 52  VKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFK 109
           V     DV     +       +  +GKLD  V+       F   +   G     S  +F 
Sbjct: 84  V-AGHCDVADAASIDAVFETLEKKWGKLDFLVHAI----GFSDKDELTGRYIDTSEANFT 138

Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA--Y---SA 164
             +L++      V+R + +L+ +         G I+ T +   Y G + +V   Y     
Sbjct: 139 NTMLISVYSLTAVSRRAEKLMADG--------GSIL-TLT---YYG-AEKVMPNYNVMGV 185

Query: 165 SKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
           +K+ +      +A DL    IRVN I+ G
Sbjct: 186 AKAALEASVKYLAVDLGPQNIRVNAISAG 214

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 34/221 (15%), Positives = 70/221 (31%), Gaps = 60/221 (27%)

Query: 1   MLKGVVGLVTGGAS------GLGKATVERIVREGGRVVLCDLPTSEG-----ESVAKELG 49
           +L G   LV+G  +       + +        +G ++VL    T        + +   L 
Sbjct: 4   LLDGKRILVSGIITDSSIAFHIARV----AQEQGAQLVL----TGFDRLRLIQRITDRLP 55

Query: 50  PDVKFAPVDVTSEEDVQKAVLLCKDSFG---KLDVNVNCAGIS--CAFKIFNYNKGTVHS 104
                  +DV +EE +        ++ G   KLD  V+  G        I  +       
Sbjct: 56  AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDA---P 112

Query: 105 LDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA 164
             D  + + ++     ++A+    +++                 SI         + +  
Sbjct: 113 YADVSKGIHISAYSYASMAKALLPIMNPG--------------GSIVG-------MDFDP 151

Query: 165 SKS-------GIVGMTLP-----MARDLAGAGIRVNTIAPG 193
           S++        +    L      +AR+    G+R N +A G
Sbjct: 152 SRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAG 192

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 46/211 (21%), Positives = 71/211 (33%), Gaps = 42/211 (19%)

Query: 1   MLKGVVGLVTGGAS------GLGKATVERIVREGGRVVLCDLPTSEGESV---AKELGPD 51
            L G   LV G  +       +       +   G  V L              A+ LG  
Sbjct: 5   DLSGKKALVMGVTNQRSLGFAIAAK----LKEAGAEVALSYQAERLRPEAEKLAEALGGA 60

Query: 52  VKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFK 109
           +     DVT +E++       K++FG LD  V+      AF      +G        D+ 
Sbjct: 61  L-LFRADVTQDEELDALFAGVKEAFGGLDYLVHAI----AFAPREAMEGRYIDTRRQDWL 115

Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA--YEGQSGQVA--Y--- 162
             L V+      VAR +  L+ E                 I    Y   S +V   Y   
Sbjct: 116 LALEVSAYSLVAVARRAEPLLREG--------------GGIVTLTYYA-SEKVVPKYNVM 160

Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
           + +K+ +      +A +L   G+RVN I+ G
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISAG 191

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 39.9 bits (93), Expect = 6e-04
 Identities = 25/169 (14%), Positives = 58/169 (34%), Gaps = 26/169 (15%)

Query: 8    LVTGGASGLGKATVERIVREGGRVVLC---DLPTSEG--ESVA--KELGPDVKFAPVDVT 60
            ++TGG  G G    + +   G + ++        +      V   +  G  V  +  + +
Sbjct: 1888 VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNAS 1947

Query: 61   SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNTVG 118
            S +  + +++      G +    N A +             + +     F+ +      G
Sbjct: 1948 SLDGAR-SLITEATQLGPVGGVFNLAMVL--------RDAVLENQTPEFFQDVSKPKYSG 1998

Query: 119  TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKS 167
            T N+ R++ +   E            +  +S++   G +GQ  Y  + S
Sbjct: 1999 TANLDRVTREACPE--------LDYFVIFSSVSCGRGNAGQANYGFANS 2039

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 38/209 (18%)

Query: 1   MLKGVVGLVTGGAS------GLGKATVERIVREGGRVVLCDLPTSEGESV---AKELGPD 51
           +++G  G++ G A+      G+ KA    +  +G  V L  L  +  + V   A+ LG  
Sbjct: 27  LMEGKKGVIIGVANDKSLAWGIAKA----VCAQGAEVALTYLSETFKKRVDPLAESLGVK 82

Query: 52  VKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFK 109
           +   P DV+  E V     +  + +G LD  V+      AF   N  KG     SL +F 
Sbjct: 83  L-TVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAV----AFSDKNELKGRYVDTSLGNFL 137

Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA--Y---SA 164
             + ++      +A  +  L+           G I+ T S   Y G + +V   Y     
Sbjct: 138 TSMHISCYSFTYIASKAEPLMTNG--------GSIL-TLS---YYG-AEKVVPHYNVMGV 184

Query: 165 SKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
            K+ +      +A DL    IRVN I+ G
Sbjct: 185 CKAALEASVKYLAVDLGKQQIRVNAISAG 213

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 38.7 bits (91), Expect = 8e-04
 Identities = 42/212 (19%), Positives = 75/212 (35%), Gaps = 42/212 (19%)

Query: 1   MLKGVVGLVTGGAS------GLGKATVERIVREGGRVVLCDLPTSEGESV---AKELGPD 51
            L+G   +V G A+      G+ ++    +   G R++         +SV   A  L  +
Sbjct: 4   SLEGRNIVVMGVANKRSIAWGIARS----LHEAGARLIFTYAGERLEKSVHELAGTLDRN 59

Query: 52  VKFA-PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDF 108
                P DVT++ +++      K+  G +    +C     AF       G     + D F
Sbjct: 60  DSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCI----AFANKEELVGEYLNTNRDGF 115

Query: 109 KRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA--YEGQSGQVA--Y-- 162
                +++     V + +  ++ E                SI    Y G    V   Y  
Sbjct: 116 LLAHNISSYSLTAVVKAARPMMTEG--------------GSIVTLTYLG-GELVMPNYNV 160

Query: 163 -SASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
              +K+ +      +A DL    IRVN+I+ G
Sbjct: 161 MGVAKASLDASVKYLAADLGKENIRVNSISAG 192

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	254
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.96
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.96
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.95
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.95
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.95
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.95
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.95
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.95
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.94
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.94
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.93
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.93
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.93
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.93
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.93
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.93
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.93
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.92
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.92
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.92
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.92
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.92
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.92
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.92
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.92
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.92
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.92
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.92
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.91
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.91
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.91
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.91
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.91
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.91
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.91
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.91
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.91
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.91
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.9
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.9
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.9
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.9
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.9
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.9
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.89
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.89
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.89
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.89
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.88
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.88
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.88
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.88
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.88
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.88
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.88
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.87
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.87
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.87
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.86
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.86
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.86
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.85
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.85
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.84
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.82
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.82
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.79
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.78
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.78
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.77
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.76
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.75
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.74
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.74
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.72
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.68
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.65
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.62
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.37
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.28
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.24
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.1
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.07
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.95
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.91
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.86
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.84
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.77
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.75
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.73
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.64
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.64
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.62
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.62
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.58
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.57
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.57
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.53
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.53
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.53
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.51
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.5
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.49
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.49
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.48
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.46
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.44
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.34
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.34
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.31
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.28
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.28
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.27
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.24
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.22
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.21
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.21
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.19
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.14
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.12
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	98.12
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.11
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.11
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.1
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.09
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	98.07
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.06
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	98.05
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.04
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.03
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.03
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.0
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.99
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.95
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.94
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.94
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.93
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.93
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.92
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.92
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.88
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.87
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.8
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.79
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.79
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.78
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.78
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.76
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.74
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.7
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.61
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.61
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.58
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.56
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.55
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.54
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.53
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.52
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.49
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.49
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.49
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.48
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.46
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.45
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.45
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.43
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.41
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.4
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.39
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.38
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.37
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.37
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.37
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.36
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.35
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.35
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.34
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.32
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.31
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.28
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.27
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.26
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.26
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.24
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.23
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.22
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.21
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.19
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.18
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.16
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.16
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.16
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.15
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.13
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.1
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.1
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.1
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.05
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.03
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.0
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.98
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.98
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.96
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.96
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.95
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.95
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.94
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.92
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.91
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.91
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.9
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.9
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.9
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.9
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.89
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.89
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.81
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.81
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.77
1lnq_A	336	MTHK channels, potassium channel related protein;	96.74
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.72
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.7
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.66
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.64
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.63
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.62
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.62
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.61
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.59
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.58
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.57
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.57
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.55
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.49
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.46
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.44
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.43
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.42
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.4
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.36
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.33
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.33
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.33
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.33
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.32
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.32
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.29
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.28
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.27
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.27
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.26
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.25
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.25
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.25
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.25
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.22
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.17
4dim_A	403	Phosphoribosylglycinamide synthetase; structural g	96.14
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.14
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.14
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	96.09
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	96.09
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.05

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=2.4e-59  Score=378.79  Aligned_cols=240  Identities=28%  Similarity=0.429  Sum_probs=217.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++++++..+++   +.++.+++||++|+++++++++++.+++|+
T Consensus         5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999999988888776   678999999999999999999999999999


Q ss_pred             CcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||+... .++.+      .+.++|++.+++|+.++++++|+++|+|.++.      .|+||++||..+..+.+
T Consensus        85 iDiLVNNAGi~~~~~~~~~------~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~------~G~IVnisS~~g~~~~~  152 (254)
T 4fn4_A           85 IDVLCNNAGIMDGVTPVAE------VSDELWERVLAVNLYSAFYSSRAVIPIMLKQG------KGVIVNTASIAGIRGGF  152 (254)
T ss_dssp             CCEEEECCCCCCTTCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTCSSS
T ss_pred             CCEEEECCcccCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEEechhhcCCCC
Confidence            9999999997643 44555      89999999999999999999999999999987      79999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHHHHHH-HHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNF-LARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      +...|++||+|+.+|+|+||.|++++|||||+|+||+++|++....   .+...+. .....|. +|+..|||+|+.++|
T Consensus       153 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-~R~g~pediA~~v~f  231 (254)
T 4fn4_A          153 AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLS-SRLAEPEDIANVIVF  231 (254)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTC-CCCBCHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCC-CCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999986543   2222233 3334455 999999999999999


Q ss_pred             Hhc--CCCcccceEEecCCcccC
Q psy12833        234 IIT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      |++  +.|+|||+|.+|||+||+
T Consensus       232 LaSd~a~~iTG~~i~VDGG~t~~  254 (254)
T 4fn4_A          232 LASDEASFVNGDAVVVDGGLTVL  254 (254)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCchhcCCcCCEEEeCCCcccC
Confidence            997  479999999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.1e-58  Score=375.04  Aligned_cols=239  Identities=29%  Similarity=0.426  Sum_probs=221.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||+++++.|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+++|+
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            58999999999999999999999999999999999999888887766   678999999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||+....++.+      .+.++|++.+++|+.++++++|+++|+|.+++.     .|+||++||..+..+.|+
T Consensus        87 iDiLVNNAG~~~~~~~~~------~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~-----~G~IVnisS~~~~~~~~~  155 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVE------LELENWQKVIDTNLTSAFLVSRSAAKRMIARNS-----GGKIINIGSLTSQAARPT  155 (255)
T ss_dssp             CCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCGGGTSBCTT
T ss_pred             CcEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC-----CCEEEEEeehhhcCCCCC
Confidence            999999999987777766      899999999999999999999999999976531     699999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ...|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+..  .++..+.+.+.+|. +|+..|||+|..++||++
T Consensus       156 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pediA~~v~fL~S  234 (255)
T 4g81_D          156 VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPS-QRWGRPEELIGTAIFLSS  234 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHHS
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999998654  34556677788998 999999999999999997


Q ss_pred             --CCCcccceEEecCCcc
Q psy12833        237 --NPLINGEVIRIDGALR  252 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~  252 (254)
                        +.|+|||+|.+|||++
T Consensus       235 ~~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          235 KASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             chhCCCcCCEEEECCCeE
Confidence              4799999999999986

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.6e-58  Score=377.45  Aligned_cols=238  Identities=24%  Similarity=0.346  Sum_probs=217.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..++++.++.+++||++|+++++++++++.+++|++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|+++|+|.+        .|+||++||..+..+.|....
T Consensus       107 LVNNAG~~~~~~~~~------~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--------~G~IInisS~~~~~~~~~~~~  172 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGE------VTEEQYDDTFDRNVKGVLFTVQKALPLLAR--------GSSVVLTGSTAGSTGTPAFSV  172 (273)
T ss_dssp             EEECCCCCCCCCTTS------CCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--------EEEEEEECCGGGGSCCTTCHH
T ss_pred             EEECCCCCCCCChhh------ccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--------CCeEEEEeehhhccCCCCchH
Confidence            999999877666655      899999999999999999999999999954        589999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-------HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-------EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |+++|+|+.+|+|++|.|++++|||||+|+||+++|++.....       ++..+.+.+.+|+ +|+..|||+|..++||
T Consensus       173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peeiA~~v~FL  251 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM-GRVGRAEEVAAAALFL  251 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999865432       2345566778898 9999999999999999


Q ss_pred             hc--CCCcccceEEecCCcccC
Q psy12833        235 IT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      ++  +.|+|||+|.+|||.+++
T Consensus       252 aSd~a~~iTG~~i~VDGG~s~V  273 (273)
T 4fgs_A          252 ASDDSSFVTGAELFVDGGSAQV  273 (273)
T ss_dssp             HSGGGTTCCSCEEEESTTTTTC
T ss_pred             hCchhcCccCCeEeECcChhhC
Confidence            97  479999999999999875

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.7e-56  Score=360.73  Aligned_cols=230  Identities=28%  Similarity=0.432  Sum_probs=210.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +|+||||||++|||+++|++|+++|++|++++|+++.++++.++ ..++.+++||++|+++++++++++.+++|++|++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            59999999999999999999999999999999998888777665 45788999999999999999999999999999999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      ||||.....++.+      .+.++|++.+++|+.++++++|++.|+|.++       .|+||++||..+..+.|....|+
T Consensus        81 NNAG~~~~~~~~~------~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-------~G~IInisS~~~~~~~~~~~~Y~  147 (247)
T 3ged_A           81 NNACRGSKGILSS------LLYEEFDYILSVGLKAPYELSRLCRDELIKN-------KGRIINIASTRAFQSEPDSEAYA  147 (247)
T ss_dssp             ECCCCCCCCGGGT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-------TCEEEEECCGGGTSCCTTCHHHH
T ss_pred             ECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-------CCcEEEEeecccccCCCCCHHHH
Confidence            9999987777766      8999999999999999999999999999876       49999999999999999999999


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccc
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGE  243 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~  243 (254)
                      +||+|+.+|+|++|.|+++ |||||+|+||+++|++.....+    ...+.+|. +|+.+|||+|++++||++++|+|||
T Consensus       148 asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~----~~~~~~Pl-~R~g~pediA~~v~fL~s~~~iTG~  221 (247)
T 3ged_A          148 SAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQ----EDCAAIPA-GKVGTPKDISNMVLFLCQQDFITGE  221 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCH----HHHHTSTT-SSCBCHHHHHHHHHHHHHCSSCCSC
T ss_pred             HHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHH----HHHhcCCC-CCCcCHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999997 9999999999999998755443    34456888 9999999999999999999999999


Q ss_pred             eEEecCCccc
Q psy12833        244 VIRIDGALRM  253 (254)
Q Consensus       244 ~i~~~gG~~~  253 (254)
                      +|.+|||+|.
T Consensus       222 ~i~VDGG~s~  231 (247)
T 3ged_A          222 TIIVDGGMSK  231 (247)
T ss_dssp             EEEESTTGGG
T ss_pred             eEEECcCHHH
Confidence            9999999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.1e-55  Score=359.02  Aligned_cols=238  Identities=29%  Similarity=0.414  Sum_probs=210.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH--HHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA--KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |+||++|||||++|||+++++.|+++|++|++++|+.++.+...  .+.+.++.+++||++|+++++++++++.+++|++
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999999999999987654332  2347789999999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||+..... .+      .+.++|++.+++|+.++++++|+++|+|+++       .|+||++||..+..+.++.
T Consensus        85 DiLVNnAGi~~~~~-~~------~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-------~G~IVnisS~~~~~~~~~~  150 (258)
T 4gkb_A           85 DGLVNNAGVNDGIG-LD------AGRDAFVASLERNLIHYYAMAHYCVPHLKAT-------RGAIVNISSKTAVTGQGNT  150 (258)
T ss_dssp             CEEEECCCCCCCCC-TT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCTHHHHCCSSC
T ss_pred             CEEEECCCCCCCCC-cc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-------CCeEEEEeehhhccCCCCc
Confidence            99999999864332 23      7899999999999999999999999999765       5999999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch------HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      ..|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+...      ++..+.+...+|+.+|+.+|||+|+.++|
T Consensus       151 ~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~f  230 (258)
T 4gkb_A          151 SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVF  230 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999976532      23345566777873589999999999999


Q ss_pred             Hhc--CCCcccceEEecCCccc
Q psy12833        234 IIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |++  +.|+|||+|.+|||+|-
T Consensus       231 LaS~~a~~iTG~~i~VDGG~T~  252 (258)
T 4gkb_A          231 LLSPRASHTTGEWLFVDGGYTH  252 (258)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTT
T ss_pred             HhCchhcCccCCeEEECCCcch
Confidence            997  47999999999999974

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.1e-55  Score=353.77  Aligned_cols=230  Identities=32%  Similarity=0.449  Sum_probs=203.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |++||++|||||++|||++++++|+++|++|++++|+.+.+++.   .+.++..++||++|+++++++++    ++|++|
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iD   80 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---RHPRIRREELDITDSQRLQRLFE----ALPRLD   80 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---CCTTEEEEECCTTCHHHHHHHHH----HCSCCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---hcCCeEEEEecCCCHHHHHHHHH----hcCCCC
Confidence            36899999999999999999999999999999999998776532   34678999999999999888775    579999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||+..  ++.+      .+.++|++.+++|+.++++++|+++|+|.++       .|+||++||..+..+.++..
T Consensus        81 iLVNNAGi~~--~~~~------~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-------~G~IVnisS~~~~~~~~~~~  145 (242)
T 4b79_A           81 VLVNNAGISR--DREE------YDLATFERVLRLNLSAAMLASQLARPLLAQR-------GGSILNIASMYSTFGSADRP  145 (242)
T ss_dssp             EEEECCCCCC--GGGG------GSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------CEEEEEECCGGGTSCCSSCH
T ss_pred             EEEECCCCCC--Cccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-------CCeEEEEeeccccCCCCCCH
Confidence            9999999853  3333      7899999999999999999999999999765       59999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++||+.+..  .++..+.+.+..|+ +|+.+|||+|+.++||++  
T Consensus       146 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Pl-gR~g~peeiA~~v~fLaSd~  224 (242)
T 4b79_A          146 AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPL-ARWGEAPEVASAAAFLCGPG  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999998654  34566777788998 999999999999999997  


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      +.|+|||+|.+|||+..
T Consensus       225 a~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          225 ASFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCccCceEEECccHhh
Confidence            47999999999999863

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3e-56  Score=357.66  Aligned_cols=235  Identities=26%  Similarity=0.380  Sum_probs=210.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |+||++|||||++|||+++++.|+++|++|++++|+.+ +..+..++.+.++.+++||++|+++++++++     ++++|
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~iD   81 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DAGFD   81 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TTCCC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hCCCC
Confidence            67999999999999999999999999999999999864 2333444557889999999999999887764     47999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||+....++.+      .+.++|++.+++|+.++|+++|+++|+|.++..     .|+||++||..+..+.++..
T Consensus        82 iLVNNAGi~~~~~~~~------~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~-----~G~IVnisS~~~~~g~~~~~  150 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVE------FSELDWDEVMDVNLKALFFTTQAFAKELLAKGR-----SGKVVNIASLLSFQGGIRVP  150 (247)
T ss_dssp             EEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCGGGTSCCSSCH
T ss_pred             EEEECCCCCCCCCccc------ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC-----CcEEEEEechhhCCCCCCCh
Confidence            9999999987777766      899999999999999999999999999987631     59999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+...  ++..+.+.+.+|+ +|+..|||+|..++||++  
T Consensus       151 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peeiA~~v~fLaSd~  229 (247)
T 4hp8_A          151 SYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPA-GRWGHSEDIAGAAVFLSSAA  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTT-SSCBCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999999999987643  4455667788998 999999999999999997  


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      +.|+|||+|.+|||++.
T Consensus       230 a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          230 ADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCCcCCeEEECccccc
Confidence            47999999999999873

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.6e-54  Score=350.44  Aligned_cols=242  Identities=18%  Similarity=0.206  Sum_probs=216.2

Q ss_pred             CCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |+||++|||||++  |||+++|++|+++|++|++++|+++.++++.+++    +.++.+++||++|+++++++++++.++
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            6899999999865  9999999999999999999999988877776654    357899999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +|++|++|||||.....++..  ...+.+.++|...+++|+.+++.+++.+.+.+.+        .|+||++||..+..+
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~--~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--------~G~IVnisS~~~~~~  153 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRG--RFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--------GGSIVATTYLGGEFA  153 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTS--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--------CEEEEEEECGGGTSC
T ss_pred             hCCCCEEEecccccccccccc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------CCEEEEEeccccccC
Confidence            999999999999865443321  2233789999999999999999999999887644        589999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .+++..|++||+|+.+|+|+||.|++++|||||+|+||+++|++.+..  .++..+.+.+..|+ +|+.+|||||+.++|
T Consensus       154 ~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl-~R~g~peevA~~v~f  232 (256)
T 4fs3_A          154 VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPL-KRNVDQVEVGKTAAY  232 (256)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT-SSCCCHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998764  35666777888998 999999999999999


Q ss_pred             HhcC--CCcccceEEecCCcccC
Q psy12833        234 IITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      |+++  .|+|||+|.+|||+|.+
T Consensus       233 L~Sd~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          233 LLSDLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCchhcCccCCEEEECcCHHhc
Confidence            9974  79999999999999864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.4e-53  Score=346.20  Aligned_cols=230  Identities=27%  Similarity=0.365  Sum_probs=203.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.++.       ..+..+++||++|+++++++++++.+++|++|+
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-------LPEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-------SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999999976532       234568999999999999999999999999999


Q ss_pred             EEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC-C
Q psy12833         82 NVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-G  158 (254)
Q Consensus        82 li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~-~  158 (254)
                      +|||||....  .++.+      .+.++|++.+++|+.++++++|+++|+|.+++      .|+||++||..+..+.| +
T Consensus        82 lVnnAG~~~~~~~~~~~------~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~------~G~Iv~isS~~~~~~~~~~  149 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSA------LSDDDWYNELSLNLFAAVRLDRQLVPDMVARG------SGVVVHVTSIQRVLPLPES  149 (261)
T ss_dssp             EEECCCCCCCCSSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCTTT
T ss_pred             EEECCCCCccCCCCccc------CCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC------CceEEEEEehhhccCCCCc
Confidence            9999997543  23444      89999999999999999999999999999887      79999999999999876 5


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH--------------HHHHHHHhcCCCCCCCCCH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--------------KVRNFLARSIPAPQRLGHP  224 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~  224 (254)
                      ...|++||+|+.+|+|++|.|++++|||||+|+||+++|++.....+              +..+.....+|. +|+.+|
T Consensus       150 ~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~p  228 (261)
T 4h15_A          150 TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL-GRPAKP  228 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT-SSCBCH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC-CCCcCH
Confidence            78899999999999999999999999999999999999998754321              222334456788 999999


Q ss_pred             HHHHHHHHHHhc--CCCcccceEEecCCc
Q psy12833        225 DEFAQLVQSIIT--NPLINGEVIRIDGAL  251 (254)
Q Consensus       225 ~~va~~~~~l~~--~~~~~G~~i~~~gG~  251 (254)
                      ||+|+.++||++  +.|+|||+|.+|||.
T Consensus       229 eevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          229 EEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            999999999997  479999999999996

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.5e-52  Score=339.37  Aligned_cols=240  Identities=32%  Similarity=0.555  Sum_probs=223.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++.+..++++|++|+++++++++++.+.++++|+
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999999988888888777889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+.++...
T Consensus        87 lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~------~g~iv~isS~~~~~~~~~~~~  154 (248)
T 3op4_A           87 LVNNAGITRDNLLMR------MKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQAN  154 (248)
T ss_dssp             EEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCHHHHHCCTTCHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CCEEEEEcchhhcCCCCCChH
Confidence            999999876665555      79999999999999999999999999998876      799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |++||+|+++|+++++.|++++||+||+++||+++|++.+...++..+......|. +++.+|+|+|+.+.||++  +.+
T Consensus       155 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~s~~~~~  233 (248)
T 3op4_A          155 YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPA-GRLGDPREIASAVAFLASPEAAY  233 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCCccCC
Confidence            99999999999999999999999999999999999999887766666666677887 999999999999999997  479


Q ss_pred             cccceEEecCCcccC
Q psy12833        240 INGEVIRIDGALRMI  254 (254)
Q Consensus       240 ~~G~~i~~~gG~~~~  254 (254)
                      +|||+|.+|||+++|
T Consensus       234 itG~~i~vdgG~~~~  248 (248)
T 3op4_A          234 ITGETLHVNGGMYMI  248 (248)
T ss_dssp             CCSCEEEESTTSSCC
T ss_pred             ccCcEEEECCCeecC
Confidence            999999999999986

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.3e-51  Score=338.29  Aligned_cols=240  Identities=28%  Similarity=0.453  Sum_probs=212.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+++++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999999999999888888889999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++...
T Consensus       105 lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~Iv~isS~~~~~~~~~~~~  172 (266)
T 3grp_A          105 LVNNAGITRDGLFVR------MQDQDWDDVLAVNLTAASTLTRELIHSMMRRR------YGRIINITSIVGVVGNPGQTN  172 (266)
T ss_dssp             EEECCCCC-----CC------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCC-------CHHH
T ss_pred             EEECCCCCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------CcEEEEECCHHHcCCCCCchh
Confidence            999999876555544      78999999999999999999999999998876      789999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.+...++..+.+....|. +++.+|||+|+.++||++  +.+
T Consensus       173 Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~-~r~~~~edvA~~v~~L~s~~~~~  251 (266)
T 3grp_A          173 YCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPM-KRMGIGEEIAFATVYLASDEAAY  251 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999999887777767777778888 999999999999999997  369


Q ss_pred             cccceEEecCCcccC
Q psy12833        240 INGEVIRIDGALRMI  254 (254)
Q Consensus       240 ~~G~~i~~~gG~~~~  254 (254)
                      +|||+|.+|||+++|
T Consensus       252 itG~~i~vdGG~~~i  266 (266)
T 3grp_A          252 LTGQTLHINGGMAMI  266 (266)
T ss_dssp             CCSCEEEESTTC---
T ss_pred             ccCCEEEECCCeeeC
Confidence            999999999999986

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=6.1e-51  Score=333.02  Aligned_cols=240  Identities=23%  Similarity=0.342  Sum_probs=217.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+++|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus         1 M~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             --CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            7899999999999999999999999999999986 88888777777665   5689999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.
T Consensus        81 g~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~------~g~iv~isS~~~~~~~  148 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVME------LEETHWDWTMNINAKALLFCAQEAAKLMEKNG------GGHIVSISSLGSIRYL  148 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT------CEEEEEEEEGGGTSBC
T ss_pred             CCCCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEECchhhCCCC
Confidence            99999999999876666655      79999999999999999999999999999876      7899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ++...|++||+|+++|+++++.|++++||+||+++||+++|++.....  ++..+......|. +++.+|+|+|+.++||
T Consensus       149 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~L  227 (258)
T 3oid_A          149 ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA-GRMVEIKDMVDTVEFL  227 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT-SSCBCHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999987653  3445566667787 9999999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .++||++|.+|||+++
T Consensus       228 ~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          228 VSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             TSSTTTTCCSCEEEESTTGGG
T ss_pred             hCcccCCccCCEEEECCCccC
Confidence            974  6899999999999975

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-51  Score=334.65  Aligned_cols=250  Identities=50%  Similarity=0.786  Sum_probs=203.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999999988888888888999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||......+..  ...+.+.++|++.+++|+.+++++++++.|.|.++........++||++||..+..+.++...
T Consensus        85 lv~nAg~~~~~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  162 (257)
T 3tpc_A           85 LVNCAGTAPGEKILG--RSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAA  162 (257)
T ss_dssp             EEECCCCCCCCCSEE--TTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred             EEECCCCCCCCcccc--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcc
Confidence            999999876544332  111268899999999999999999999999998753222223689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcc
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN  241 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  241 (254)
                      |++||+|+++|+++++.|++++||+||+++||+++|++.....++..+.+....|.++++.+|||+|+.+.||+++++++
T Consensus       163 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~~~it  242 (257)
T 3tpc_A          163 YAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICENTMLN  242 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHHHHHHHHHHCTTCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcccCCcC
Confidence            99999999999999999999999999999999999999877666666666666776689999999999999999999999


Q ss_pred             cceEEecCCccc
Q psy12833        242 GEVIRIDGALRM  253 (254)
Q Consensus       242 G~~i~~~gG~~~  253 (254)
                      ||+|.+|||+++
T Consensus       243 G~~i~vdGG~~~  254 (257)
T 3tpc_A          243 GEVIRLDGALRM  254 (257)
T ss_dssp             SCEEEESTTCCC
T ss_pred             CcEEEECCCccC
Confidence            999999999986

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.4e-51  Score=331.67  Aligned_cols=240  Identities=28%  Similarity=0.490  Sum_probs=218.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+.+|++|||||++|||++++++|+++|++|++++|+. +.+++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus         1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            88999999999999999999999999999999988754 5555555544   6778999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+.
T Consensus        81 g~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  148 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMR------MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR------SGAIINLSSVVGAVGN  148 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCHHHHHCC
T ss_pred             CCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CCEEEEEcchhhcCCC
Confidence            99999999999876555444      79999999999999999999999999998876      7899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|++||+|+++|+++++.|++++||+||+++||+++|++.+...++..+.+....|. +++.+|+|+|+.++||++
T Consensus       149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~l~s  227 (246)
T 3osu_A          149 PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPL-ARFGQDTDIANTVAFLAS  227 (246)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHTS
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999887777777777778888 999999999999999997


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.++||++|.+|||++|
T Consensus       228 ~~~~~itG~~i~vdgG~~~  246 (246)
T 3osu_A          228 DKAKYITGQTIHVNGGMYM  246 (246)
T ss_dssp             GGGTTCCSCEEEESTTSCC
T ss_pred             ccccCCCCCEEEeCCCccC
Confidence              47999999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=6.9e-51  Score=336.35  Aligned_cols=241  Identities=30%  Similarity=0.430  Sum_probs=216.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            788999999999999999999999999999999999998888877766   56789999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHH--HHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQ--LIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|  .|.++.      .++||++||..+..+
T Consensus       101 ~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~------~g~iV~isS~~~~~~  168 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETAD------LDDALWADVLDTNLTGVFRVTREVLRAGGMREAG------WGRIVNIASTGGKQG  168 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT------CEEEEEECCGGGTSC
T ss_pred             CCcEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC------CcEEEEECChhhccC
Confidence            9999999999876666655      79999999999999999999999999  577665      689999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-----------hHHHHHHHHhcCCCCCCCCCH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHP  224 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  224 (254)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..           .++..+.+....|. +++.+|
T Consensus       169 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p  247 (279)
T 3sju_A          169 VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-GRYSTP  247 (279)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT-SSCBCH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC-CCCCCH
Confidence            999999999999999999999999999999999999999999987542           34455666677787 999999


Q ss_pred             HHHHHHHHHHhcC--CCcccceEEecCCcccC
Q psy12833        225 DEFAQLVQSIITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       225 ~~va~~~~~l~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      ||+|+.++||+++  .++|||+|.+|||++++
T Consensus       248 edvA~~v~~L~s~~a~~itG~~i~vdGG~~~y  279 (279)
T 3sju_A          248 EEVAGLVGYLVTDAAASITAQALNVCGGLGNY  279 (279)
T ss_dssp             HHHHHHHHHHTSSGGGGCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHhCccccCcCCcEEEECCCccCC
Confidence            9999999999974  68999999999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-50  Score=331.81  Aligned_cols=239  Identities=28%  Similarity=0.396  Sum_probs=219.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---C-CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---G-PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+++++..+++   + .++.+++||++|+++++++++++.++++
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            57999999999999999999999999999999999998888777766   2 5789999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~  156 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+. .+.
T Consensus        88 ~id~lvnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~------~g~iv~isS~~~~~~~~  155 (262)
T 3pk0_A           88 GIDVVCANAGVFPDAPLAT------MTPEQLNGIFAVNVNGTFYAVQACLDALIASG------SGRVVLTSSITGPITGY  155 (262)
T ss_dssp             CCSEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS------SCEEEEECCSBTTTBCC
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEechhhccCCC
Confidence            9999999999876555555      79999999999999999999999999999876      6899999999986 788


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|++||+++++|+++++.|++++||+||+++||+++|++.....++..+.+.+..|. +++.+|+|+|+.++||++
T Consensus       156 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~s  234 (262)
T 3pk0_A          156 PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPA-GALGTPEDIGHLAAFLAT  234 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            8999999999999999999999999999999999999999998877666667777778888 999999999999999997


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.++|||+|.+|||+++
T Consensus       235 ~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          235 KEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             GGGTTCCSCEEEESTTTTC
T ss_pred             ccccCCcCCEEEECCCeec
Confidence              46899999999999876

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=3.4e-50  Score=329.92  Aligned_cols=239  Identities=26%  Similarity=0.351  Sum_probs=213.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.+++||++|+++++++++++.+.+
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999999988887777665     2358999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.
T Consensus        86 g~id~lvnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  153 (265)
T 3lf2_A           86 GCASILVNNAGQGRVSTFAE------TTDEAWSEELQLKFFSVIHPVRAFLPQLESRA------DAAIVCVNSLLASQPE  153 (265)
T ss_dssp             CSCSEEEECCCCCCCBCTTT------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST------TEEEEEEEEGGGTSCC
T ss_pred             CCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------CeEEEEECCcccCCCC
Confidence            99999999999876655555      89999999999999999999999999998876      7999999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch----------HHHHHHHHhc--CCCCCCCCCH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN----------EKVRNFLARS--IPAPQRLGHP  224 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~----------~~~~~~~~~~--~~~~~~~~~~  224 (254)
                      ++...|+++|+|+++|+++++.|++++||+||+|+||+++|++.....          +...+.....  .|. +|+.+|
T Consensus       154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p  232 (265)
T 3lf2_A          154 PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-GRLGKP  232 (265)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT-CSCBCH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc-CCCcCH
Confidence            999999999999999999999999999999999999999999875432          1222222222  677 999999


Q ss_pred             HHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        225 DEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       225 ~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ||+|+.++||++  +.++||++|.+|||+++
T Consensus       233 edvA~~v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          233 IEAARAILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHHHHHHHHHhCchhcCcCCCEEEECCCCcC
Confidence            999999999997  47999999999999975

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.6e-50  Score=332.53  Aligned_cols=239  Identities=29%  Similarity=0.488  Sum_probs=219.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+++
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999988877776654   678899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||+....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+.++
T Consensus       106 iD~lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  173 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMR------MKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR------GGRIVNITSVVGSAGNPG  173 (270)
T ss_dssp             CCEEEECCCCCCCBCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCHHHHHCCTT
T ss_pred             CCEEEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CCEEEEECchhhCCCCCC
Confidence            999999999876655544      79999999999999999999999999998876      799999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      ...|+++|+|+++|+++++.|++++||+||+|+||+++|++.....++..+.+....|. +++.+|||+|+.++||++  
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~  252 (270)
T 3ftp_A          174 QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPL-GRLGSPEDIAHAVAFLASPQ  252 (270)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999877666666667777787 999999999999999996  


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      +.+++|++|.+|||+++
T Consensus       253 ~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          253 AGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             cCCccCcEEEECCCccc
Confidence            47999999999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3e-50  Score=328.62  Aligned_cols=238  Identities=28%  Similarity=0.446  Sum_probs=217.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988887777655   678999999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++ +      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++
T Consensus        90 id~lv~nAg~~~~~~~-~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  156 (256)
T 3gaf_A           90 ITVLVNNAGGGGPKPF-D------MPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG------GGAILNISSMAGENTNVR  156 (256)
T ss_dssp             CCEEEECCCCCCCCCT-T------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCGGGTCCCTT
T ss_pred             CCEEEECCCCCCCCCC-C------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEEcCHHHcCCCCC
Confidence            9999999998765544 4      79999999999999999999999999998876      789999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      ...|++||+|+++|+++++.|++++||+||+++||+++|++.... .++..+.+....|. +++.+|+|+|+.++||++ 
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~~~~L~s~  235 (256)
T 3gaf_A          157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL-GRLGEAQDIANAALFLCSP  235 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999999987543 34555566677777 999999999999999997 


Q ss_pred             -CCCcccceEEecCCccc
Q psy12833        237 -NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 -~~~~~G~~i~~~gG~~~  253 (254)
                       +.+++||+|.+|||++.
T Consensus       236 ~~~~itG~~i~vdgG~~~  253 (256)
T 3gaf_A          236 AAAWISGQVLTVSGGGVQ  253 (256)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             cccCccCCEEEECCCccc
Confidence             47999999999999864

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.2e-50  Score=329.28  Aligned_cols=240  Identities=25%  Similarity=0.418  Sum_probs=216.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.+++||++|+++++++++++.+.++++|+
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            68999999999999999999999999999999999999999988888889999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|+|.++..     .++||++||..+..+.++...
T Consensus        84 lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~  152 (247)
T 3rwb_A           84 LVNNASIVPFVAWDD------VDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK-----AGRVISIASNTFFAGTPNMAA  152 (247)
T ss_dssp             EEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCTHHHHTCTTCHH
T ss_pred             EEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-----CcEEEEECchhhccCCCCchh
Confidence            999999876666555      799999999999999999999999999987631     489999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhc-CCCCCCCCCHHHHHHHHHHHhcC--C
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-IPAPQRLGHPDEFAQLVQSIITN--P  238 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~~~--~  238 (254)
                      |+++|+|+++|+++++.|++++||+||+++||+++|++.....+......... .|. ++..+|||+|+.+.||+++  .
T Consensus       153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~r~~~pedva~~v~~L~s~~~~  231 (247)
T 3rwb_A          153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAM-KGKGQPEHIADVVSFLASDDAR  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSS-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhccccc-CCCcCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999998765433322233333 666 8999999999999999974  6


Q ss_pred             CcccceEEecCCccc
Q psy12833        239 LINGEVIRIDGALRM  253 (254)
Q Consensus       239 ~~~G~~i~~~gG~~~  253 (254)
                      ++|||+|.+|||++.
T Consensus       232 ~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          232 WITGQTLNVDAGMVR  246 (247)
T ss_dssp             TCCSCEEEESTTSSC
T ss_pred             CCCCCEEEECCCccC
Confidence            999999999999863

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=3.2e-50  Score=330.91  Aligned_cols=239  Identities=28%  Similarity=0.422  Sum_probs=219.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            57999999999999999999999999999999999998888877765   678899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++
T Consensus       104 iD~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iV~isS~~~~~~~~~  171 (271)
T 4ibo_A          104 VDILVNNAGIQFRKPMIE------LETADWQRVIDTNLTSAFMIGREAAKRMIPRG------YGKIVNIGSLTSELARAT  171 (271)
T ss_dssp             CCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSBCTT
T ss_pred             CCEEEECCCCCCCCCchh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEEccHHhCCCCCC
Confidence            999999999876666655      79999999999999999999999999999876      689999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ...|+++|+|+++|+++++.|++++||+||+++||+++|++.+...  ++..+.+....|. +++.+|||+|+.++||++
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedva~~v~~L~s  250 (271)
T 4ibo_A          172 VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA-KRWGKPQELVGTAVFLSA  250 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHHS
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999876542  3455566677888 999999999999999997


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.++|||+|.+|||+++
T Consensus       251 ~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          251 SASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             ccccCCCCcEEEECCCeec
Confidence              47999999999999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=5e-50  Score=327.86  Aligned_cols=240  Identities=27%  Similarity=0.436  Sum_probs=218.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.+++||++|+++++++++++.++++++|+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56899999999999999999999999999999999999999988888888999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++++.|.|.+++.     .++||++||..+..+.++...
T Consensus        86 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~  154 (259)
T 4e6p_A           86 LVNNAALFDLAPIVE------ITRESYEKLFAINVAGTLFTLQAAARQMIAQGR-----GGKIINMASQAGRRGEALVAI  154 (259)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-----CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCCcCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-----CeEEEEECChhhccCCCCChH
Confidence            999999876666655      799999999999999999999999999987531     489999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-----------hHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      |++||+++++|+++++.|++++||+||+++||+++|++....           .++..+.+....|. +++.+|+|+|++
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~  233 (259)
T 4e6p_A          155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPF-GRMGTAEDLTGM  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCC-CCCcCHHHHHHH
Confidence            999999999999999999999999999999999999987543           22334445566777 999999999999


Q ss_pred             HHHHhc--CCCcccceEEecCCccc
Q psy12833        231 VQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++||++  +.+++||+|.+|||+++
T Consensus       234 v~~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          234 AIFLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             HHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHhCCccCCCCCCEEEECcChhc
Confidence            999997  47999999999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4e-50  Score=329.64  Aligned_cols=240  Identities=29%  Similarity=0.409  Sum_probs=217.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.+++||++|+++++++++++.+.++
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999988877766654    67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++++.|.|.++..     .++||++||..+..+.+
T Consensus        98 ~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~  166 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVD------TDPQLFDATIAVNLRAPALLASAVGKAMVAAGE-----GGAIITVASAAALAPLP  166 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-----CEEEEEECCGGGTSCCT
T ss_pred             CCCEEEECCCcCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-----CeEEEEEcchhhccCCC
Confidence            9999999999877666655      799999999999999999999999999987631     47999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      +...|+++|+|+++|+++++.|++++||+||+|+||+++|++....  .++..+.+....|. +++.+|||+|+.++||+
T Consensus       167 ~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~  245 (266)
T 4egf_A          167 DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL-GRFAVPHEVSDAVVWLA  245 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999987543  23444556667787 99999999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .++|||+|.+|||+++
T Consensus       246 s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          246 SDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCccCcEEEECCCccC
Confidence            74  7999999999999975

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=7.2e-50  Score=332.07  Aligned_cols=239  Identities=31%  Similarity=0.405  Sum_probs=219.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC----CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG----PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.    .++.+++||++|+++++++++++.+.++
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999999888887772    5788999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~  156 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+. .+.
T Consensus       119 ~iD~lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~iV~isS~~~~~~~~  186 (293)
T 3rih_A          119 ALDVVCANAGIFPEARLDT------MTPEQLSEVLDVNVKGTVYTVQACLAPLTASG------RGRVILTSSITGPVTGY  186 (293)
T ss_dssp             CCCEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS------SCEEEEECCSBTTTBBC
T ss_pred             CCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CCEEEEEeChhhccCCC
Confidence            9999999999876655544      79999999999999999999999999998876      6899999999986 788


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|++||+++++|+++++.|++++||+||+|+||+++|++.....++..+.+.+..|. +++.+|+|+|+.++||++
T Consensus       187 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~fL~s  265 (293)
T 3rih_A          187 PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPM-GMLGSPVDIGHLAAFLAT  265 (293)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhC
Confidence            8999999999999999999999999999999999999999998876666666777778888 999999999999999997


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.++||++|.+|||+++
T Consensus       266 ~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          266 DEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             GGGTTCCSCEEEESTTTTC
T ss_pred             ccccCCCCCEEEECCCccC
Confidence              47999999999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=9.4e-50  Score=327.08  Aligned_cols=238  Identities=23%  Similarity=0.332  Sum_probs=215.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999998888777665   678999999999999999999999999999


Q ss_pred             CcEEEeCCccC-CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGIS-CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||.. ...++.+      .+.++|++.+++|+.++++++++++|.|.++       .++||++||..+..+.+
T Consensus        89 id~lv~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  155 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFAN------TTFEHMRDAIELTVFGALRLIQGFTPALEES-------KGAVVNVNSMVVRHSQA  155 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-------TCEEEEECCGGGGCCCT
T ss_pred             CcEEEECCCCCCCCCCchh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------CCEEEEECcchhccCCC
Confidence            99999999875 3344444      7999999999999999999999999999876       48999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhcCCCCCCCCCHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  226 (254)
                      ++..|++||+|+++|+++++.|++++||+||+++||+++|++.+...           ++..+.+....|. +++.+|||
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~d  234 (264)
T 3ucx_A          156 KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDL-KRLPTEDE  234 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSS-SSCCBHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCc-ccCCCHHH
Confidence            99999999999999999999999999999999999999999875532           3344555667777 99999999


Q ss_pred             HHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        227 FAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       227 va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +|+.++||+++  .++|||+|.+|||+++
T Consensus       235 vA~~v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          235 VASAILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            99999999974  7999999999999875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2e-49  Score=326.33  Aligned_cols=236  Identities=31%  Similarity=0.461  Sum_probs=216.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999999999998888889999999999999999999999999999999


Q ss_pred             EEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         82 NVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        82 li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      +|||||....  ..+.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++.
T Consensus        89 lv~nAg~~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~~~~~~~~~  156 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQ------MTVDVWDDTFTVNARGTMLMCKYAIPRLISAG------GGAIVNISSATAHAAYDMS  156 (271)
T ss_dssp             EEECCCCCCTTCCCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------CEEEEEECCGGGTSBCSSC
T ss_pred             EEECCCCCCCCCCcccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCEEEEECCHHHcCCCCCC
Confidence            9999998632  22333      79999999999999999999999999999876      7999999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc-cchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS-MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++.. ...++..+.+....|. +++.+|+|+|+.++||++  
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~r~~~p~dvA~~v~~L~s~~  235 (271)
T 3tzq_B          157 TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA-GRIGEPHEIAELVCFLASDR  235 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999999876 4455566667777787 999999999999999997  


Q ss_pred             CCCcccceEEecCC
Q psy12833        237 NPLINGEVIRIDGA  250 (254)
Q Consensus       237 ~~~~~G~~i~~~gG  250 (254)
                      +.++||++|.+|||
T Consensus       236 ~~~itG~~i~vdGG  249 (271)
T 3tzq_B          236 AAFITGQVIAADSG  249 (271)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             cCCcCCCEEEECCC
Confidence            47999999999999

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.7e-49  Score=327.50  Aligned_cols=239  Identities=32%  Similarity=0.498  Sum_probs=217.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999999998888888889999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus       105 lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  172 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVT------IPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG------GGSIINTTSYTATSAIADRTA  172 (277)
T ss_dssp             EEECCCCCCCBCTTT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT------CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCCcCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CcEEEEECchhhCcCCCCChh
Confidence            999999876655555      79999999999999999999999999998876      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++....      .......+....|. +++.+|||+|+.++||+
T Consensus       173 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L~  251 (277)
T 4dqx_A          173 YVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVM-DRMGTAEEIAEAMLFLA  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTT-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcc-cCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999984321      12223335566777 99999999999999999


Q ss_pred             c--CCCcccceEEecCCccc
Q psy12833        236 T--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~--~~~~~G~~i~~~gG~~~  253 (254)
                      +  +.+++|++|.+|||+++
T Consensus       252 s~~~~~itG~~i~vdGG~~~  271 (277)
T 4dqx_A          252 SDRSRFATGSILTVDGGSSI  271 (277)
T ss_dssp             SGGGTTCCSCEEEESSSSSS
T ss_pred             CCccCCCcCCEEEECCchhh
Confidence            7  46899999999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=3.6e-50  Score=327.87  Aligned_cols=237  Identities=30%  Similarity=0.449  Sum_probs=215.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.++++.++++.++.++++|++|+++++++++++.+.++++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            57899999999999999999999999999999999999999888888888999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+..+.++...
T Consensus        86 lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~  151 (255)
T 4eso_A           86 LHINAGVSELEPFDQ------VSEASYDRQFAVNTKGAFFTVQRLTPLIRE--------GGSIVFTSSVADEGGHPGMSV  151 (255)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEECCGGGSSBCTTBHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--------CCEEEEECChhhcCCCCCchH
Confidence            999999877666655      799999999999999999999999998854        489999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--ch----HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LN----EKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      |++||+|+++|+++++.|++++||+||+++||+++|++...  ..    +...+......|. ++..+|||+|+.++||+
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~  230 (255)
T 4eso_A          152 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM-KRNGTADEVARAVLFLA  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC-CCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999998643  11    2233344556777 99999999999999999


Q ss_pred             c-CCCcccceEEecCCccc
Q psy12833        236 T-NPLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~-~~~~~G~~i~~~gG~~~  253 (254)
                      + +.++||++|.+|||++.
T Consensus       231 s~~~~itG~~i~vdGG~~~  249 (255)
T 4eso_A          231 FEATFTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             HTCTTCCSCEEEESTTTTT
T ss_pred             CcCcCccCCEEEECCCccc
Confidence            7 58999999999999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=8.9e-50  Score=325.99  Aligned_cols=240  Identities=28%  Similarity=0.464  Sum_probs=213.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999999999888888776   457899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++..     .++||++||..+..+.++
T Consensus        84 id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~  152 (257)
T 3imf_A           84 IDILINNAAGNFICPAED------LSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-----KGNIINMVATYAWDAGPG  152 (257)
T ss_dssp             CCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----CCEEEEECCGGGGSCCTT
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-----CcEEEEECchhhccCCCC
Confidence            999999999876655555      899999999999999999999999999954321     589999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhc-cCCcEEEEEecCCccccccccc---hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLA-GAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++....   .++..+.+.+..|. +++.+|||+|+.++||
T Consensus       153 ~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L  231 (257)
T 3imf_A          153 VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPL-GRLGTPEEIAGLAYYL  231 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTT-CSCBCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999997 7799999999999999865431   22233445566777 9999999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .++||++|.+|||+++
T Consensus       232 ~s~~~~~itG~~i~vdGG~~~  252 (257)
T 3imf_A          232 CSDEAAYINGTCMTMDGGQHL  252 (257)
T ss_dssp             HSGGGTTCCSCEEEESTTTTS
T ss_pred             cCchhcCccCCEEEECCCccc
Confidence            974  6899999999999876

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-49  Score=327.78  Aligned_cols=239  Identities=29%  Similarity=0.435  Sum_probs=216.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999999888888776   567899999999999999999999999999


Q ss_pred             CcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCC
Q psy12833         79 LDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQ  156 (254)
Q Consensus        79 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~  156 (254)
                      +|++|||||+... .++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+. .+.
T Consensus        86 iD~lvnnAg~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  153 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISS------LSVEGWRETLDTNLTSAFLAAKYQVPAIAALG------GGSLTFTSSFVGHTAGF  153 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCSBTTTBCC
T ss_pred             CCEEEECCCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CCEEEEEcChhhCcCCC
Confidence            9999999997633 44444      79999999999999999999999999999876      7899999999998 778


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-c---hHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-L---NEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|++... .   .++..+.+....|. +++.+|||+|+.++
T Consensus       154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~  232 (280)
T 3tox_A          154 AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL-KRIARPEEIAEAAL  232 (280)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT-SSCBCHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc-CCCcCHHHHHHHHH
Confidence            8899999999999999999999999999999999999999998654 2   34455566667777 99999999999999


Q ss_pred             HHhcC--CCcccceEEecCCccc
Q psy12833        233 SIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ||+++  .++|||+|.+|||+++
T Consensus       233 ~L~s~~a~~itG~~i~vdGG~~~  255 (280)
T 3tox_A          233 YLASDGASFVTGAALLADGGASV  255 (280)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCccccCCcCcEEEECCCccc
Confidence            99974  7999999999999976

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.2e-49  Score=328.55  Aligned_cols=240  Identities=28%  Similarity=0.396  Sum_probs=215.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++++|++|+++++++++++.+.+
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            378999999999999999999999999999999999988777766654    6789999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.
T Consensus       104 g~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~  171 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGA------LSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH------GGVIVNITATLGNRGQ  171 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH------CEEEEEECCSHHHHTC
T ss_pred             CCCCEEEECCcCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CCEEEEECchhhCCCC
Confidence            99999999999876655555      79999999999999999999999999998776      6899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|++....   .++..+......|. +++.+|+|+|+.++|
T Consensus       172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~f  250 (277)
T 4fc7_A          172 ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL-QRLGNKTEIAHSVLY  250 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT-SSCBCHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC-CCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999864221   23444556667787 999999999999999


Q ss_pred             Hhc--CCCcccceEEecCCccc
Q psy12833        234 IIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |++  +.++||++|.+|||+++
T Consensus       251 L~s~~~~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          251 LASPLASYVTGAVLVADGGAWL  272 (277)
T ss_dssp             HHSGGGTTCCSCEEEESTTHHH
T ss_pred             HcCCccCCcCCCEEEECCCccc
Confidence            997  47999999999999865

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.9e-49  Score=326.01  Aligned_cols=236  Identities=33%  Similarity=0.544  Sum_probs=212.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.++++|++|+++++++++++.+.++
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999988 445555555444   67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.+
T Consensus       106 ~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  173 (269)
T 4dmm_A          106 RLDVLVNNAGITRDTLLLR------MKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR------SGRIINIASVVGEMGNP  173 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCHHHHHCCT
T ss_pred             CCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEECchhhcCCCC
Confidence            9999999999876665555      79999999999999999999999999998876      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|++||+|+++|+++++.|++++||+||+|+||+++|++......   +.+....|. +++.+|+|+|+.++||+++
T Consensus       174 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~p~-~r~~~~~dvA~~v~~l~s~  249 (269)
T 4dmm_A          174 GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA---EKLLEVIPL-GRYGEAAEVAGVVRFLAAD  249 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH---HHHGGGCTT-SSCBCHHHHHHHHHHHHHC
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH---HHHHhcCCC-CCCCCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999998765332   455567777 9999999999999999975


Q ss_pred             ---CCcccceEEecCCccc
Q psy12833        238 ---PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ---~~~~G~~i~~~gG~~~  253 (254)
                         .++|||+|.+|||+++
T Consensus       250 ~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          250 PAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             GGGGGCCSCEEEESTTSCC
T ss_pred             cccCCCcCCEEEECCCeec
Confidence               4899999999999986

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.2e-50  Score=330.14  Aligned_cols=239  Identities=29%  Similarity=0.465  Sum_probs=213.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999999999888888889999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+.++...
T Consensus       107 lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~Iv~isS~~~~~~~~~~~~  174 (277)
T 3gvc_A          107 LVANAGVVHLASLID------TTVEDFDRVIAINLRGAWLCTKHAAPRMIERG------GGAIVNLSSLAGQVAVGGTGA  174 (277)
T ss_dssp             EEECCCCCCCBCTTT------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEEcchhhccCCCCchh
Confidence            999999876655555      79999999999999999999999999998876      799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH----HHHHHHHh---cCCCCCCCCCHHHHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE----KVRNFLAR---SIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |+++|+|+++|+++++.|++++||+||+|+||+++|++......    ...+....   ..|. +++.+|||+|+.++||
T Consensus       175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L  253 (277)
T 3gvc_A          175 YGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQ-GRMAAPEEMAGIVVFL  253 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHH-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccc-cCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998654211    11111111   2334 7899999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.++|||+|.+|||++.
T Consensus       254 ~s~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          254 LSDDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCccCCccCcEEEECCcchh
Confidence            96  47999999999999874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=4e-49  Score=320.28  Aligned_cols=239  Identities=25%  Similarity=0.452  Sum_probs=221.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999999988887776655   678999999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.+++      .++||++||..+..+.++
T Consensus        83 id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  150 (247)
T 3lyl_A           83 IDILVNNAGITRDNLMMR------MSEDEWQSVINTNLSSIFRMSKECVRGMMKKR------WGRIISIGSVVGSAGNPG  150 (247)
T ss_dssp             CSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCTHHHHCCTT
T ss_pred             CCEEEECCCCCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CeEEEEEcchhhccCCCC
Confidence            999999999876665555      79999999999999999999999999998876      689999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      ...|+++|+|+++|+++++.|++++||++++++||+++|++.+...++..+.+....|. +++.+|||+|+.+.+|++  
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~i~~l~s~~  229 (247)
T 3lyl_A          151 QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPS-GQIGEPKDIAAAVAFLASEE  229 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTT-CCCBCHHHHHHHHHHHHSGG
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999888777777777777887 999999999999999996  


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      +++++|++|.+|||+++
T Consensus       230 ~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          230 AKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             cCCccCCEEEECCCEec
Confidence            47899999999999976

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=4.4e-49  Score=324.94  Aligned_cols=239  Identities=29%  Similarity=0.445  Sum_probs=215.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999999888877765   568999999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--  156 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--  156 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++..     .++||++||..+..+.  
T Consensus       110 iD~lvnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~-----~g~iv~isS~~~~~~~~~  178 (276)
T 3r1i_A          110 IDIAVCNAGIVSVQAMLD------MPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL-----GGTIITTASMSGHIINIP  178 (276)
T ss_dssp             CSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-----CEEEEEECCGGGTSCCCS
T ss_pred             CCEEEECCCCCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----CcEEEEECchHhcccCCC
Confidence            999999999877666655      799999999999999999999999999987641     3899999999987654  


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...+ ..+.+....|. +++.+|||+|+.++||++
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~p~-~r~~~pedvA~~v~fL~s  256 (276)
T 3r1i_A          179 QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-YHALWEPKIPL-GRMGRPEELTGLYLYLAS  256 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-GHHHHGGGSTT-SSCBCGGGSHHHHHHHHS
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            3578899999999999999999999999999999999999999876533 34555667787 999999999999999997


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.++|||+|.+|||+++
T Consensus       257 ~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          257 AASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             GGGTTCCSCEEEESTTTTC
T ss_pred             ccccCccCcEEEECcCccC
Confidence              47999999999999975

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=9.7e-50  Score=325.79  Aligned_cols=246  Identities=52%  Similarity=0.837  Sum_probs=206.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+   +..++++.++.++++|++|+++++++++.+.+ ++++|+
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~   82 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADLGDRARFAAADVTDEAAVASALDLAET-MGTLRI   82 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEE
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hCCCCE
Confidence            57899999999999999999999999999999999544   34456678899999999999999999999887 899999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCC--CCCCcEEEEEeccccccCCCCC
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNE--DGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      +|||||......+..  ...+.+.++|++.+++|+.++++++++++|.|.++....  ....++||++||..+..+.++.
T Consensus        83 lv~nAg~~~~~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  160 (257)
T 3tl3_A           83 VVNCAGTGNAIRVLS--RDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQ  160 (257)
T ss_dssp             EEECGGGSHHHHHHH--HTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHH
T ss_pred             EEECCCCCCCccccc--ccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCC
Confidence            999999865433322  111268899999999999999999999999998732110  1126899999999999998889


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL  239 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  239 (254)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++.....++..+......|.++++.+|||+|+.++||+++++
T Consensus       161 ~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~~~  240 (257)
T 3tl3_A          161 AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENPM  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHCTT
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999998877777666677777766899999999999999999999


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      +|||+|.+|||+++
T Consensus       241 itG~~i~vdGG~~~  254 (257)
T 3tl3_A          241 LNGEVIRLDGAIRM  254 (257)
T ss_dssp             CCSCEEEESTTC--
T ss_pred             CCCCEEEECCCccC
Confidence            99999999999986

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.4e-49  Score=325.27  Aligned_cols=239  Identities=27%  Similarity=0.439  Sum_probs=205.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++    +.++.++++|++|+++++++++++.+.+
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            56899999999999999999999999999999999 445566665554    5678999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+.
T Consensus       103 g~iD~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~  170 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIED------FPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG------WGRIINIASAHGLVAS  170 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCC
T ss_pred             CCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CCEEEEECCcccccCC
Confidence            99999999999876666555      79999999999999999999999999999876      7999999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHH------------HHHHHhcCCCCCCCCCH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV------------RNFLARSIPAPQRLGHP  224 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~------------~~~~~~~~~~~~~~~~~  224 (254)
                      ++...|++||+|+++|+++++.|++++||+||+++||+++|++.....+..            .+.+.+..|. +++.+|
T Consensus       171 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~  249 (281)
T 3v2h_A          171 PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT-KKFITV  249 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTT-CSCBCH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCC-CCccCH
Confidence            999999999999999999999999999999999999999999875432111            1224445666 899999


Q ss_pred             HHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        225 DEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       225 ~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +|+|+.++||+++  .++||++|.+|||+++
T Consensus       250 edvA~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          250 EQVASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence            9999999999974  6899999999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=5.9e-49  Score=319.13  Aligned_cols=240  Identities=31%  Similarity=0.553  Sum_probs=213.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ||++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999 766666665554   5678899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.
T Consensus        81 g~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  148 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMR------MKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR------HGRIVNIASVVGVTGN  148 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCTHHHHCC
T ss_pred             CCCCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEECCHHhcCCC
Confidence            99999999999876555555      78999999999999999999999999998765      6899999999999998


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|+++|+++++|+++++.|++++||+||+++||+++|++.....+...+.+....|. +++.+|+|+|+.++++++
T Consensus       149 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s  227 (246)
T 2uvd_A          149 PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPA-AQFGEAQDIANAVTFFAS  227 (246)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTT-CSCBCHHHHHHHHHHHHS
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            8999999999999999999999999999999999999999998765433333444455676 889999999999999997


Q ss_pred             C--CCcccceEEecCCccc
Q psy12833        237 N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~  253 (254)
                      +  .+++|++|.+|||+++
T Consensus       228 ~~~~~~tG~~~~vdgG~~~  246 (246)
T 2uvd_A          228 DQSKYITGQTLNVDGGMVM  246 (246)
T ss_dssp             GGGTTCCSCEEEESTTSCC
T ss_pred             chhcCCCCCEEEECcCccC
Confidence            4  6899999999999874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-49  Score=324.35  Aligned_cols=236  Identities=32%  Similarity=0.457  Sum_probs=202.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee-CCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++||++|||||++|||++++++|+++|++|++++ |+.+.++++.+++   +.++.+++||++|+++++++++++.+.+
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999874 4555566555544   6788999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||+....++.+      .+.++|++.+++|+.+++++++.++|.|.+        .++||++||..+..+.
T Consensus       104 g~iD~lvnnAG~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~  169 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAE------TGDAVFDRVIAVNLKGTFNTLREAAQRLRV--------GGRIINMSTSQVGLLH  169 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--------EEEEEEECCTHHHHCC
T ss_pred             CCCCEEEECCCCCCCCChhh------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------CCeEEEEeChhhccCC
Confidence            99999999999876666555      799999999999999999999999999854        4899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|++.... .++..+.+.+..|. ++..+|||+|+.++||+
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~  248 (267)
T 3u5t_A          170 PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPL-ERLGTPQDIAGAVAFLA  248 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTT-CSCBCHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999987542 33445566677787 99999999999999999


Q ss_pred             c--CCCcccceEEecCCc
Q psy12833        236 T--NPLINGEVIRIDGAL  251 (254)
Q Consensus       236 ~--~~~~~G~~i~~~gG~  251 (254)
                      +  +.++|||+|.+|||+
T Consensus       249 s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          249 GPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             STTTTTCCSEEEEESSSC
T ss_pred             CccccCccCCEEEeCCCc
Confidence            7  468999999999996

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=9.9e-49  Score=323.80  Aligned_cols=239  Identities=27%  Similarity=0.431  Sum_probs=215.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CC---CceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GP---DVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.   ++.++++|++|+++++++++++.+.
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998888777766   22   6889999999999999999999999


Q ss_pred             cCCCcEEEeCCcc-CCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         76 FGKLDVNVNCAGI-SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        76 ~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                      ++++|++|||||. ....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..
T Consensus        89 ~g~id~lv~nAg~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~  156 (281)
T 3svt_A           89 HGRLHGVVHCAGGSENIGPITQ------VDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG------GGSFVGISSIAASN  156 (281)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------CEEEEEECCHHHHS
T ss_pred             cCCCCEEEECCCcCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEeCHHHcC
Confidence            9999999999997 33334444      79999999999999999999999999999876      78999999999999


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      +.++...|++||+++++|+++++.|++++||+||+++||+++|++....  .++..+.+....|. ++..+|+|+|++++
T Consensus       157 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~~~  235 (281)
T 3svt_A          157 THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL-PRQGEVEDVANMAM  235 (281)
T ss_dssp             CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS-SSCBCHHHHHHHHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC-CCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987653  23444556667787 99999999999999


Q ss_pred             HHhcC--CCcccceEEecCCccc
Q psy12833        233 SIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ||+++  .++||++|.+|||+++
T Consensus       236 ~l~s~~~~~itG~~~~vdgG~~~  258 (281)
T 3svt_A          236 FLLSDAASFVTGQVINVDGGQML  258 (281)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCcccCCCCCCEEEeCCChhc
Confidence            99974  7899999999999875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.9e-48  Score=322.85  Aligned_cols=241  Identities=24%  Similarity=0.342  Sum_probs=206.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC----------------CchhHHHHHHh---CCCceEEecCCCCH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP----------------TSEGESVAKEL---GPDVKFAPVDVTSE   62 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~----------------~~~~~~~~~~~---~~~~~~~~~Dls~~   62 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+                .+.+++..+++   +.++.+++||++|+
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            579999999999999999999999999999999987                34445544443   56789999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEeCCccCCCcc-ccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCC
Q psy12833         63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFK-IFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLR  141 (254)
Q Consensus        63 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~  141 (254)
                      ++++++++++.+.++++|++|||||...... +.+      .+.++|++.+++|+.++++++++++|.|.++..     .
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-----~  157 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDK------TSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR-----G  157 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-----C
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCcccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC-----C
Confidence            9999999999999999999999999865543 444      799999999999999999999999999987531     4


Q ss_pred             cEEEEEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH--------------HH
Q psy12833        142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--------------KV  207 (254)
Q Consensus       142 ~~ii~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--------------~~  207 (254)
                      ++||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++......              +.
T Consensus       158 g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T 3uve_A          158 GSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDM  237 (286)
T ss_dssp             EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             cEEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhH
Confidence            8999999999999999999999999999999999999999999999999999999998753211              11


Q ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        208 RNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ..........|+++.+|+|+|++++||++  +.++|||+|.+|||+++
T Consensus       238 ~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          238 APICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             HHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            11111111223788999999999999997  47999999999999986

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-48  Score=322.11  Aligned_cols=240  Identities=26%  Similarity=0.403  Sum_probs=206.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC------------chhHHHHHH---hCCCceEEecCCCCHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT------------SEGESVAKE---LGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~------------~~~~~~~~~---~~~~~~~~~~Dls~~~~~~   66 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.            +.+++..++   .+.++.++++|++|+++++
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            6799999999999999999999999999999999973            333333333   3678999999999999999


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEE
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIIN  146 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~  146 (254)
                      ++++++.+.++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||+
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~  155 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGISTIALLPE------VESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN------YGRIVT  155 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCCCCTTC------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEE
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CCEEEE
Confidence            999999999999999999999876555555      79999999999999999999999999998876      799999


Q ss_pred             EeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--------------HHHHHHHH
Q psy12833        147 TASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--------------EKVRNFLA  212 (254)
Q Consensus       147 vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--------------~~~~~~~~  212 (254)
                      +||..+..+.++...|+++|+|+++|+++++.|++++||+||+|+||+++|++.....              ....+.+.
T Consensus       156 isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (281)
T 3s55_A          156 VSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA  235 (281)
T ss_dssp             ECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHH
T ss_pred             ECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999875310              11111111


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        213 RSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       213 ~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .....++++.+|+|+|+.++||++  +.++||++|.+|||+++
T Consensus       236 ~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          236 SLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             HHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence            222223889999999999999997  46899999999999874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-48  Score=315.58  Aligned_cols=236  Identities=35%  Similarity=0.547  Sum_probs=212.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..++++  +.++++|++|+++++++++++.+.++++|+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--CEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999999999999999888877776653  888999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||.. ..+.++...
T Consensus        81 lvn~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~-~~~~~~~~~  147 (245)
T 1uls_A           81 VVHYAGITRDNFHWK------MPLEDWELVLRVNLTGSFLVAKAASEAMREKN------PGSIVLTASRV-YLGNLGQAN  147 (245)
T ss_dssp             EEECCCCCCCCCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC------CEEEEEECCGG-GGCCTTCHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CCEEEEEccch-hcCCCCchh
Confidence            999999876555555      78999999999999999999999999998765      68999999998 888888899


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~  239 (254)
                      |+++|+++.+|+++++.|++++||+||+|+||+++|++.....++..+.+....|. ++..+|+|+|+.+++++++  .+
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~v~~l~s~~~~~  226 (245)
T 1uls_A          148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSF  226 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCC-CCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999998765544444555556677 8899999999999999974  68


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      ++|+++.+|||+++
T Consensus       227 ~tG~~~~vdgG~~~  240 (245)
T 1uls_A          227 ITGQVLFVDGGRTI  240 (245)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CcCCEEEECCCccc
Confidence            99999999999865

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-48  Score=320.88  Aligned_cols=237  Identities=27%  Similarity=0.416  Sum_probs=210.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+ +.+++..+++   +.++.++++|++|+++++++.+. .+.+++
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~~g~  106 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAATRR  106 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHhcCC
Confidence            579999999999999999999999999999999965 4455555544   56788999999999999999554 455689


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++
T Consensus       107 iD~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~IV~isS~~~~~~~~~  174 (273)
T 3uf0_A          107 VDVLVNNAGIIARAPAEE------VSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG------SGRIVTIASMLSFQGGRN  174 (273)
T ss_dssp             CCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCSS
T ss_pred             CcEEEECCCCCCCCCchh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCEEEEEcchHhcCCCCC
Confidence            999999999877666655      79999999999999999999999999998876      799999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ...|+++|+|+++|+++++.|++++||+||+|+||+++|++....  .++..+.+....|. +++.+|||+|++++||++
T Consensus       175 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedva~~v~~L~s  253 (273)
T 3uf0_A          175 VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA-GRWATPEDMVGPAVFLAS  253 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT-SSCBCGGGGHHHHHHHHS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999987654  34445556667887 999999999999999997


Q ss_pred             C--CCcccceEEecCCccc
Q psy12833        237 N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~  253 (254)
                      +  .++|||+|.+|||+++
T Consensus       254 ~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          254 DAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCCcCCEEEECcCccC
Confidence            4  7999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6.4e-49  Score=324.29  Aligned_cols=240  Identities=26%  Similarity=0.374  Sum_probs=206.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-------------CCchhHHHHHHh---CCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-------------PTSEGESVAKEL---GPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~   65 (254)
                      ++||++|||||++|||++++++|+++|++|++++|             +.+.+++..+++   +.++.++.+|++|++++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            67999999999999999999999999999999998             344445444433   67899999999999999


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEE
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVII  145 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii  145 (254)
                      +++++++.+.++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++..     .++||
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-----~g~iv  157 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDD------ITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR-----GGSII  157 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-----CEEEE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhh------CCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-----CCEEE
Confidence            9999999999999999999999877666555      799999999999999999999999999987631     48999


Q ss_pred             EEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH-HHHHH----------HHhc
Q psy12833        146 NTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE-KVRNF----------LARS  214 (254)
Q Consensus       146 ~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~-~~~~~----------~~~~  214 (254)
                      ++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++...... .....          +...
T Consensus       158 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (277)
T 3tsc_A          158 LISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF  237 (277)
T ss_dssp             EECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCS
T ss_pred             EEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhc
Confidence            999999999999999999999999999999999999999999999999999998754211 11110          1111


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCcccC
Q psy12833        215 IPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       215 ~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      .  +.++.+|||+|+.++||++  +.++||++|.+|||++++
T Consensus       238 ~--p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  277 (277)
T 3tsc_A          238 L--PDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQY  277 (277)
T ss_dssp             S--SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             c--CCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcccC
Confidence            1  2468899999999999997  478999999999999874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1e-48  Score=322.65  Aligned_cols=236  Identities=23%  Similarity=0.318  Sum_probs=212.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+. ++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~  109 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-AP  109 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CC
Confidence            67999999999999999999999999999999999999888877765   678999999999999999999999888 99


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+.++
T Consensus       110 iD~lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~Iv~isS~~~~~~~~~  177 (275)
T 4imr_A          110 VDILVINASAQINATLSA------LTPNDLAFQLAVNLGSTVDMLQSALPKMVARK------WGRVVSIGSINQLRPKSV  177 (275)
T ss_dssp             CCEEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCTT
T ss_pred             CCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEECCHHhCCCCCC
Confidence            999999999876666655      79999999999999999999999999998876      799999999999998888


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---HHHHHHHHhcC-CCCCCCCCHHHHHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---EKVRNFLARSI-PAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l  234 (254)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++.....   ++..+.+.... |. ++..+|||+|+.++||
T Consensus       178 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL  256 (275)
T 4imr_A          178 VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM-GRAGRPEEMVGAALFL  256 (275)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT-CSCBCGGGGHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc-CCCcCHHHHHHHHHHH
Confidence            8889999999999999999999999999999999999999875532   23333344444 66 9999999999999999


Q ss_pred             hcC--CCcccceEEecCCc
Q psy12833        235 ITN--PLINGEVIRIDGAL  251 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~  251 (254)
                      +++  .++|||+|.+|||+
T Consensus       257 ~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          257 ASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             HSGGGTTCCSCEEEESSCC
T ss_pred             cCcccCCCCCCEEEeCCCC
Confidence            974  79999999999995

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.8e-48  Score=318.80  Aligned_cols=240  Identities=28%  Similarity=0.422  Sum_probs=207.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ||++|++|||||++|||++++++|+++|++|++++|+.+. +++..+++    +.++.++++|++|+++++++++++.+.
T Consensus         1 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999999999877 77666554    567889999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~  148 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIED------FPTEKWDAILALNLSAVFHGTAAALPHMKKQG------FGRIINIASAHGLVA  148 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSC
T ss_pred             cCCCCEEEECCCCCCCCChhh------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCEEEEECcHHhCcC
Confidence            999999999999876555555      78999999999999999999999999998765      689999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH-----------HHHHHH-HhcCCCCCCCCC
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE-----------KVRNFL-ARSIPAPQRLGH  223 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~-----------~~~~~~-~~~~~~~~~~~~  223 (254)
                      .++...|+++|+++++|+++++.|++++||+||+++||+++|++.....+           +..+.+ ....|. +++.+
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~  227 (260)
T 1x1t_A          149 SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVT  227 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT-CCCBC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCC-CCCcC
Confidence            99999999999999999999999999999999999999999998654321           111222 334566 89999


Q ss_pred             HHHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        224 PDEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       224 ~~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+|+|+.+++|+++  .+++|+++.+|||+++
T Consensus       228 p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          228 PEQLGGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhChhhcCCCCCEEEECCCccC
Confidence            99999999999974  6899999999999875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-49  Score=326.57  Aligned_cols=240  Identities=27%  Similarity=0.394  Sum_probs=208.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999999888888776   467899999999999999999999999999


Q ss_pred             CcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc--C
Q psy12833         79 LDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE--G  155 (254)
Q Consensus        79 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~--~  155 (254)
                      +|++|||||.... .++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..  +
T Consensus       106 iD~lVnnAg~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~Iv~isS~~~~~~~~  173 (283)
T 3v8b_A          106 LDIVVANAGINGVWAPIDD------LKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG------GGAIVVVSSINGTRTFT  173 (283)
T ss_dssp             CCEEEECCCCCCCBCCTTT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCSBTTTBCC
T ss_pred             CCEEEECCCCCCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CceEEEEcChhhccCCC
Confidence            9999999998643 33434      79999999999999999999999999999876      79999999999987  7


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHH-H----HHHHhcCCCC-CCCCCHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKV-R----NFLARSIPAP-QRLGHPDEF  227 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~-~----~~~~~~~~~~-~~~~~~~~v  227 (254)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....  .+. .    +......|.+ ++..+|||+
T Consensus       174 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedv  253 (283)
T 3v8b_A          174 TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDV  253 (283)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHH
Confidence            7889999999999999999999999999999999999999999876532  111 0    0111122211 788899999


Q ss_pred             HHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        228 AQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       228 a~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |+.++||++  +.++|||+|.+|||+++
T Consensus       254 A~~v~fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          254 AELIRFLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHcCccccCCcCCEEEECcCccc
Confidence            999999997  47999999999999876

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.3e-48  Score=318.29  Aligned_cols=243  Identities=33%  Similarity=0.475  Sum_probs=204.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++++.++++.++.+++||++|+++++++++++.+.++++|+
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            67999999999999999999999999999999999999999998888889999999999999999999999999999999


Q ss_pred             EEeCCccCC-CccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||||... ..++.+      .+.++|++.+++|+.+++++++.++|.|.++...  ...++||++||..+..+.++..
T Consensus        87 li~~Ag~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~~~~~iv~isS~~~~~~~~~~~  158 (261)
T 3n74_A           87 LVNNAGIGHKPQNAEL------VEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAK--GQECVILNVASTGAGRPRPNLA  158 (261)
T ss_dssp             EEECCCCCCCSCCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECCTTTTSCCTTCH
T ss_pred             EEECCccCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--CCCeEEEEeCchhhcCCCCCcc
Confidence            999999865 333333      6899999999999999999999999999876311  1147899999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      .|+++|+|+++|+++++.|++++||+|++++||+++|++....    .++..+.+.+..|. +++.+|||+|+.+++|++
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s  237 (261)
T 3n74_A          159 WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM-GRLLKPDDLAEAAAFLCS  237 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTT-SSCCCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCc-CCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999987654    23334445556777 899999999999999996


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.++||++|++|||+++
T Consensus       238 ~~~~~itG~~i~vdgG~~~  256 (261)
T 3n74_A          238 PQASMITGVALDVDGGRSI  256 (261)
T ss_dssp             GGGTTCCSCEEEESTTTTC
T ss_pred             CcccCcCCcEEEecCCccc
Confidence              47899999999999876

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-48  Score=316.42  Aligned_cols=239  Identities=29%  Similarity=0.463  Sum_probs=216.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee-CCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      .++|++|||||++|||++++++|+++|++|++++ |+.+..++..+++   +.++.++++|++|+++++++++++.+.++
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999999999887 6666655555443   67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.+
T Consensus        91 ~id~lv~~Ag~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  158 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRK------MTREDWQAVIDTNLTSLFNVTKQVIDGMVERG------WGRIINISSVNGQKGQF  158 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCCCGGGSCS
T ss_pred             CCCEEEECCCCCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCEEEEEcchhhccCCC
Confidence            9999999999876555544      79999999999999999999999999999876      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      +...|+++|+|+++|+++++.|++++||+|++++||+++|++.+...++..+.+....|. +++.+|+|+|+.+.+|++ 
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~  237 (256)
T 3ezl_A          159 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPV-RRLGSPDEIGSIVAWLASE  237 (256)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999999887777777777777887 999999999999999996 


Q ss_pred             -CCCcccceEEecCCccc
Q psy12833        237 -NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 -~~~~~G~~i~~~gG~~~  253 (254)
                       +.+++|++|.+|||+++
T Consensus       238 ~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          238 ESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             cccCCcCcEEEECCCEeC
Confidence             47899999999999976

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=5.6e-48  Score=321.94  Aligned_cols=241  Identities=24%  Similarity=0.361  Sum_probs=205.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC------------CchhHHHHHHh---CCCceEEecCCCCHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP------------TSEGESVAKEL---GPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~   66 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+            .+.+++..+++   +.++.+++||++|+++++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            578999999999999999999999999999999987            34444444433   678999999999999999


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCCcc-ccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEE
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCAFK-IFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVII  145 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii  145 (254)
                      ++++++.+.++++|++|||||...... +.+      .+.++|++.+++|+.++++++++++|.|.+++.     .++||
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-----~g~Iv  174 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNR------MDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR-----GGSIV  174 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS-----CEEEE
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CcEEE
Confidence            999999999999999999999875543 333      799999999999999999999999999877531     58999


Q ss_pred             EEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH--------------HHHHHH
Q psy12833        146 NTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--------------KVRNFL  211 (254)
Q Consensus       146 ~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--------------~~~~~~  211 (254)
                      ++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++......              ......
T Consensus       175 ~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (299)
T 3t7c_A          175 FTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS  254 (299)
T ss_dssp             EECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH
T ss_pred             EECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHh
Confidence            999999999999999999999999999999999999999999999999999998753211              111111


Q ss_pred             HhcCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        212 ARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       212 ~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ......++++.+|+|+|++++||++  +.++||++|.+|||+++
T Consensus       255 ~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          255 RQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             HHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            1111222788999999999999997  46999999999999986

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=2.4e-48  Score=317.92  Aligned_cols=233  Identities=19%  Similarity=0.253  Sum_probs=199.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++.+...+.+  +.++++|++|+++++++++++.+.++++|+
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG--AVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT--CEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC--CeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            578999999999999999999999999999999999887665555543  789999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||...... .+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+.++...
T Consensus       103 lv~nAg~~~~~~-~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~------~g~iv~isS~~~~~~~~~~~~  169 (260)
T 3gem_A          103 VVHNASEWLAET-PG------EEADNFTRMFSVHMLAPYLINLHCEPLLTASE------VADIVHISDDVTRKGSSKHIA  169 (260)
T ss_dssp             EEECCCCCCCCC-TT------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS------SCEEEEECCGGGGTCCSSCHH
T ss_pred             EEECCCccCCCC-CC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CcEEEEECChhhcCCCCCcHh
Confidence            999999765443 22      57899999999999999999999999998876      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcc
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN  241 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  241 (254)
                      |++||+|+++|+++++.|+++ +|+||+++||+++|++..  .+...+......|. ++..+|||+|+.++||+++++++
T Consensus       170 Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~--~~~~~~~~~~~~p~-~r~~~~edva~~v~~L~~~~~it  245 (260)
T 3gem_A          170 YCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD--DAAYRANALAKSAL-GIEPGAEVIYQSLRYLLDSTYVT  245 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-----------------CCS-CCCCCTHHHHHHHHHHHHCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC--CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhhCCCCC
Confidence            999999999999999999988 699999999999998754  23333444556677 89999999999999999889999


Q ss_pred             cceEEecCCccc
Q psy12833        242 GEVIRIDGALRM  253 (254)
Q Consensus       242 G~~i~~~gG~~~  253 (254)
                      |++|.+|||+++
T Consensus       246 G~~i~vdGG~~~  257 (260)
T 3gem_A          246 GTTLTVNGGRHV  257 (260)
T ss_dssp             SCEEEESTTTTT
T ss_pred             CCEEEECCCccc
Confidence            999999999986

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.9e-49  Score=324.45  Aligned_cols=242  Identities=25%  Similarity=0.405  Sum_probs=190.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.+++||++|+++++++++++.+.++
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999996 555666665554   67899999999999999999999999999


Q ss_pred             CCcEEEeCCccC--CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         78 KLDVNVNCAGIS--CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        78 ~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++|++|||||..  ...++.+      .+.++|++.+++|+.++++++++++|.|.++..   ...++||++||..+..+
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~---~~~g~Iv~isS~~~~~~  177 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLD------LKPENFDTIVGVNLRGTVFFTQAVLKAMLASDA---RASRSIINITSVSAVMT  177 (280)
T ss_dssp             CCCEEEEECC------CCGGG------CCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCC---CCCEEEEEECCC-----
T ss_pred             CCCEEEECCCccccCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC---CCCCEEEEEcchhhccC
Confidence            999999999983  3344444      799999999999999999999999999987531   11479999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR-SIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....++..+.... ..|. +++.+|||+|+.++||
T Consensus       178 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L  256 (280)
T 4da9_A          178 SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPM-RRWGEPEDIGNIVAGL  256 (280)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCc-CCcCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987655444444433 5666 8999999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .++|||+|.+|||+++
T Consensus       257 ~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          257 AGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             HTSTTGGGTTCEEEESTTCC-
T ss_pred             hCccccCCCCCEEEECCCccc
Confidence            974  5899999999999975

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-48  Score=317.43  Aligned_cols=239  Identities=32%  Similarity=0.518  Sum_probs=213.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.+++||++|+++++++++++.+.++
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999988777766554    67889999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc-cccCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA-AYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~-~~~~~  156 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||.. +..+.
T Consensus        99 ~iD~lvnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~~~~~~~  166 (267)
T 1vl8_A           99 KLDTVVNAAGINRRHPAEE------FPLDEFRQVIEVNLFGTYYVCREAFSLLRESD------NPSIINIGSLTVEEVTM  166 (267)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS------SCEEEEECCGGGTCCCS
T ss_pred             CCCEEEECCCcCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CcEEEEECCcchhccCC
Confidence            9999999999876555555      78999999999999999999999999998765      68999999998 88888


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.....  ++..+.+....|. ++..+|+|+|+.+++|
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l  245 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL-GRTGVPEDLKGVAVFL  245 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT-SSCBCGGGGHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCC-CCCcCHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999875432  3333444455676 8899999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .+++|++|.+|||+++
T Consensus       246 ~s~~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          246 ASEEAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             cCccccCCcCCeEEECCCCCC
Confidence            974  6899999999999874

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=3.6e-48  Score=318.64  Aligned_cols=236  Identities=28%  Similarity=0.419  Sum_probs=208.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++|||++++++|+++|++|++++++. +.+++..+++   +.++.+++||++|+++++++++++.+.++
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            6799999999999999999999999999999987654 4455555444   67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc-cccCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA-AYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~-~~~~~  156 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||.. ...+.
T Consensus        96 ~id~lvnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~  161 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKD------VTEEEFDRVFSLNTRGQFFVAREAYRHLTE--------GGRIVLTSSNTSKDFSV  161 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--------TCEEEEECCTTTTTCCC
T ss_pred             CCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--------CCeEEEEeCchhccCCC
Confidence            9999999999876666655      799999999999999999999999999865        48999999988 56788


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------------chHHHHHHHHhcCCCCCCCCCH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------------LNEKVRNFLARSIPAPQRLGHP  224 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------------~~~~~~~~~~~~~~~~~~~~~~  224 (254)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|++...            ..++..+......|. ++..+|
T Consensus       162 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p  240 (270)
T 3is3_A          162 PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWP  240 (270)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT-CSCBCH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC-CCCCCH
Confidence            8899999999999999999999999999999999999999998752            123444556667787 999999


Q ss_pred             HHHHHHHHHHhc--CCCcccceEEecCCcc
Q psy12833        225 DEFAQLVQSIIT--NPLINGEVIRIDGALR  252 (254)
Q Consensus       225 ~~va~~~~~l~~--~~~~~G~~i~~~gG~~  252 (254)
                      ||+|+.++||++  +.++||++|.+|||++
T Consensus       241 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          241 QDVANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            999999999997  4799999999999974

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=5.4e-48  Score=319.38  Aligned_cols=250  Identities=44%  Similarity=0.723  Sum_probs=221.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.++++.++++.++.+++||++|+++++++++++ +.++++|+
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~  106 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRY  106 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCe
Confidence            57899999999999999999999999999999999999999999998889999999999999999999999 88899999


Q ss_pred             EEeC-CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNC-AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~-ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +||| +|......+.. ....+.+.++|++.+++|+.+++++++.+++.+.+.........++||++||..+..+.++..
T Consensus       107 lv~~aag~~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  185 (281)
T 3ppi_A          107 AVVAHGGFGVAQRIVQ-RDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQT  185 (281)
T ss_dssp             EEECCCCCCCCCCSBC-TTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCH
T ss_pred             EEEccCcccccccccc-cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCc
Confidence            9999 55443333221 122337889999999999999999999999999874433333378999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCc
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI  240 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  240 (254)
                      .|++||+|+++|+++++.|++++||+|++++||+++|++.+...++..+.+....|.+++..+|||+|+.+++|++++++
T Consensus       186 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~  265 (281)
T 3ppi_A          186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNGYI  265 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHCSSC
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcCCCc
Confidence            99999999999999999999999999999999999999988777766677777777668899999999999999999999


Q ss_pred             ccceEEecCCccc
Q psy12833        241 NGEVIRIDGALRM  253 (254)
Q Consensus       241 ~G~~i~~~gG~~~  253 (254)
                      +|++|.+|||+++
T Consensus       266 tG~~i~vdGG~~~  278 (281)
T 3ppi_A          266 NGEVMRLDGAQRF  278 (281)
T ss_dssp             CSCEEEESTTCCC
T ss_pred             CCcEEEECCCccc
Confidence            9999999999976

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.5e-48  Score=320.73  Aligned_cols=240  Identities=30%  Similarity=0.462  Sum_probs=208.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+++|++|||||++|||++++++|+++|++|++++| +.+..++..+++   +.++.+++||++|+++++++++++.+.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999984 444444444433   5789999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.+++      .++||++||..+..+.
T Consensus       102 g~id~li~nAg~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~  169 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMK------MTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR------FGRIVNIGSVNGSRGA  169 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCHHHHHCC
T ss_pred             CCCCEEEECCCcCCCcchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCEEEEeCChhhccCC
Confidence            99999999999876655544      79999999999999999999999999998876      6899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHH-HHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN-FLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ++...|+++|+|+++|+++++.|++++||+|++++||+++|++.+...+...+ .+....|. +++.+|+|+|+.+++|+
T Consensus       170 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dvA~~v~~L~  248 (269)
T 3gk3_A          170 FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPV-GRLGRPDEVAALIAFLC  248 (269)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTT-SSCBCHHHHHHHHHHHT
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCc-CCccCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999998776544333 34455666 89999999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .+++|++|.+|||+++
T Consensus       249 s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          249 SDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             STTCTTCCSCEEEESTTSCC
T ss_pred             CCCcCCeeCcEEEECCCEeC
Confidence            74  6899999999999875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-48  Score=319.14  Aligned_cols=239  Identities=30%  Similarity=0.477  Sum_probs=211.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.+++||++|+++++++++++.+.+
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988777766554     5678999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||||.... .++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+
T Consensus        91 g~id~lv~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~  158 (267)
T 1iy8_A           91 GRIDGFFNNAGIEGKQNPTES------FTAAEFDKVVSINLRGVFLGLEKVLKIMREQG------SGMVVNTASVGGIRG  158 (267)
T ss_dssp             SCCSEEEECCCCCCCCBCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCGGGTSB
T ss_pred             CCCCEEEECCCcCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CCEEEEEcchhhccC
Confidence            999999999998654 44444      78999999999999999999999999998775      689999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hHHHHH----HHHhcCCCCCCCCCHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NEKVRN----FLARSIPAPQRLGHPDEF  227 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~v  227 (254)
                      .++...|+++|+++++|+++++.|++++||+||+|+||+++|++....    .++..+    .+....|. ++..+|+|+
T Consensus       159 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dv  237 (267)
T 1iy8_A          159 IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-KRYGEAPEI  237 (267)
T ss_dssp             CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT-CSCBCHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCC-CCCcCHHHH
Confidence            999999999999999999999999999999999999999999986532    111112    44455676 899999999


Q ss_pred             HHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        228 AQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       228 a~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+.+++|+++  .+++|++|.+|||+++
T Consensus       238 A~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          238 AAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHcCccccCCCCCEEEECCCccc
Confidence            9999999974  5899999999999875

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.8e-48  Score=319.52  Aligned_cols=239  Identities=28%  Similarity=0.438  Sum_probs=207.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.++ .+.+.++   .+.++.++++|++|+++++++++++.+.++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999999999999995543 3444333   367899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.+++      .++||++||..+..+.+
T Consensus       107 ~id~li~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  174 (271)
T 4iin_A          107 GLSYLVNNAGVVRDKLAIK------MKTEDFHHVIDNNLTSAFIGCREALKVMSKSR------FGSVVNVASIIGERGNM  174 (271)
T ss_dssp             SCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCHHHHHCCT
T ss_pred             CCCEEEECCCcCCCccccc------CCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC------CCEEEEEechhhcCCCC
Confidence            9999999999877665555      79999999999999999999999999999876      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|+++|+|+++|+++++.|++++||+|++++||+++|++.+...++..+.+.+..|. ++..+|+|+|+.+++|+++
T Consensus       175 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~p~dvA~~i~~l~s~  253 (271)
T 4iin_A          175 GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPL-NRLGSAKEVAEAVAFLLSD  253 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCc-CCCcCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999999877766665666667777 8999999999999999973


Q ss_pred             --CCcccceEEecCCccc
Q psy12833        238 --PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~~  253 (254)
                        .+++|++|.+|||++|
T Consensus       254 ~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          254 HSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             CcCCCcCCEEEeCCCeeC
Confidence              7899999999999976

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=7.1e-48  Score=314.89  Aligned_cols=238  Identities=30%  Similarity=0.446  Sum_probs=210.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch--hHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE--GESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~--~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.  +++..+++   +.++.++++|++|+++++++++++.+.++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            37899999999999999999999999999999998877  66666555   56789999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCC-cEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLR-GVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~-~~ii~vss~~~~~~~  156 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      . ++||++||..+..+.
T Consensus        81 ~iD~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~~g~iv~isS~~~~~~~  148 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLE------VTEEDLKQIYSVNVFSVFFGIQAASRKFDELG------VKGKIINAASIAAIQGF  148 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCCEEEEECCGGGTSCC
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC------CCcEEEEECcchhccCC
Confidence            9999999999876555555      78999999999999999999999999998765      4 899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhcCCCCCCCCCHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  225 (254)
                      ++...|+++|+++++|+++++.|++++||+||+++||+++|++.....           ++..+.+....|. +++.+|+
T Consensus       149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~  227 (258)
T 3a28_C          149 PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIAL-GRPSVPE  227 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTT-SSCBCHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCC-CCccCHH
Confidence            999999999999999999999999999999999999999999865421           2223344455676 8899999


Q ss_pred             HHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        226 EFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       226 ~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+|+.++||+++  .+++|++|.+|||+++
T Consensus       228 dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          228 DVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             HHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence            999999999974  5899999999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1e-47  Score=316.42  Aligned_cols=239  Identities=30%  Similarity=0.445  Sum_probs=207.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc-C
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF-G   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~   77 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+ +
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988777766654   5678999999999999999999999999 8


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.+
T Consensus        99 ~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~------~g~iv~isS~~~~~~~~  166 (273)
T 1ae1_A           99 KLNILVNNAGVVIHKEAKD------FTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ------NGNVIFLSSIAGFSALP  166 (273)
T ss_dssp             CCCEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------SEEEEEECCGGGTSCCT
T ss_pred             CCcEEEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEcCHhhcCCCC
Confidence            9999999999865544444      78999999999999999999999999998765      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch------HHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      +...|+++|+++++|+++++.|++++||+||+++||+++|++.....      ++..+.+....|. +++.+|+|+|+.+
T Consensus       167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v  245 (273)
T 1ae1_A          167 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-GRAGKPQEVSALI  245 (273)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-CSCBCHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999999865421      2233444455777 8999999999999


Q ss_pred             HHHhcC--CCcccceEEecCCccc
Q psy12833        232 QSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       232 ~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++|+++  .+++|++|.+|||+++
T Consensus       246 ~~l~s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          246 AFLCFPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhCccccCcCCCEEEECCCccc
Confidence            999974  6899999999999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-48  Score=321.13  Aligned_cols=242  Identities=26%  Similarity=0.407  Sum_probs=206.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-------------CCchhHHHHHHh---CCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-------------PTSEGESVAKEL---GPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~   65 (254)
                      ++||++|||||++|||++++++|+++|++|++++|             +.+++++..+++   +.++.++++|++|++++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            67999999999999999999999999999999998             445555555444   66889999999999999


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEE
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVII  145 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii  145 (254)
                      +++++++.+.++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++..     .++||
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-----~g~iv  161 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSWGRVWE------LTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN-----GGSIV  161 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-----CEEEE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-----CCEEE
Confidence            9999999999999999999999877666555      799999999999999999999999999987631     48999


Q ss_pred             EEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-HHHHHH---HHhc----CCC
Q psy12833        146 NTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNF---LARS----IPA  217 (254)
Q Consensus       146 ~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~---~~~~----~~~  217 (254)
                      ++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++..... .+....   ..+.    ...
T Consensus       162 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
T 3pgx_A          162 VVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQ  241 (280)
T ss_dssp             EECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTB
T ss_pred             EEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccC
Confidence            99999999999999999999999999999999999999999999999999999875421 111100   0111    011


Q ss_pred             CCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCcccC
Q psy12833        218 PQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       218 ~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      +.++.+|||+|+.++||++  +.++|||+|.+|||++++
T Consensus       242 ~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  280 (280)
T 3pgx_A          242 PNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALKY  280 (280)
T ss_dssp             CSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGGC
T ss_pred             CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccCC
Confidence            2468899999999999997  468999999999999864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=3.9e-48  Score=320.17  Aligned_cols=242  Identities=29%  Similarity=0.397  Sum_probs=210.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.++++.++++.++.+++||++|+++++++++++.+.++++|+
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999999999999999999999999998888888888999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||+......... ...+.+.++|++.+++|+.++++++++++|.|.++       .++||++||..+..+.++...
T Consensus        83 lvnnAg~~~~~~~~~~-~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  154 (281)
T 3zv4_A           83 LIPNAGIWDYSTALAD-LPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-------RGSVVFTISNAGFYPNGGGPL  154 (281)
T ss_dssp             EECCCCCCCTTCCGGG-SCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCGGGTSSSSSCHH
T ss_pred             EEECCCcCcccccccc-CChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-------CCeEEEEecchhccCCCCCch
Confidence            9999998644322211 11124567899999999999999999999999875       489999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch----------HHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN----------EKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      |++||+|+++|+++++.|+++. |+||+|+||+++|++.....          .+..+.+....|. +|+.+|+|+|+.+
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v  232 (281)
T 3zv4_A          155 YTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI-GRMPALEEYTGAY  232 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT-SSCCCGGGGSHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC-CCCCCHHHHHHHH
Confidence            9999999999999999999987 99999999999999864311          1133455667787 9999999999999


Q ss_pred             HHHhc-C--CCcccceEEecCCccc
Q psy12833        232 QSIIT-N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       232 ~~l~~-~--~~~~G~~i~~~gG~~~  253 (254)
                      +||++ +  .++|||+|.+|||+++
T Consensus       233 ~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          233 VFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             HHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             HHhhcccccccccCcEEEECCCCcc
Confidence            99998 3  5799999999999975

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.1e-47  Score=315.44  Aligned_cols=231  Identities=32%  Similarity=0.509  Sum_probs=206.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+...       ..+.++++|++|+++++++++++.+.++++|+
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-------NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-------TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-------CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999876542       35778999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus        85 lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  152 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHL------TPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG------HGSIINIASVQSYAATKNAAA  152 (269)
T ss_dssp             EEECCCCCCCCCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSBCTTCHH
T ss_pred             EEECCCcCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CCEEEEECchhhccCCCCChh
Confidence            999999876665555      79999999999999999999999999998876      799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      |++||+|+++|+++++.|+++ +|+||+|+||+++|++.....           ++..+.+....|. +++.+|||+|+.
T Consensus       153 Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~  230 (269)
T 3vtz_A          153 YVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM-GRIGRPEEVAEV  230 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTT-SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            999999999999999999988 899999999999999864431           3344555667787 999999999999


Q ss_pred             HHHHhc--CCCcccceEEecCCccc
Q psy12833        231 VQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++||++  +.++||++|.+|||+++
T Consensus       231 v~~L~s~~~~~itG~~i~vdGG~~~  255 (269)
T 3vtz_A          231 VAFLASDRSSFITGACLTVDGGLLS  255 (269)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCCccCCCcCcEEEECCCccc
Confidence            999997  47999999999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.2e-47  Score=314.87  Aligned_cols=239  Identities=27%  Similarity=0.396  Sum_probs=206.4

Q ss_pred             CCCcEEEEeCCC-ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA-SGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas-~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++||++|||||+ +|||++++++|+++|++|++++|+.+.+++..+++    +.++.+++||++|+++++++++++.+.+
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            689999999998 59999999999999999999999998888877766    3579999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.+++.     .++||++||..+..+.
T Consensus       100 g~id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~  168 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVD------MTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-----GGVIVNNASVLGWRAQ  168 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC-----CEEEEEECCGGGTCCC
T ss_pred             CCCcEEEECCCcCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-----CeEEEEeCCHHHcCCC
Confidence            99999999999876666555      799999999999999999999999999987621     6899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ++...|+++|+|+++|+++++.|++++||+|++++||+++|++.+... ++..+.+....|. ++..+|||+|+.++||+
T Consensus       169 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~r~~~~~dva~~i~~l~  247 (266)
T 3o38_A          169 HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAF-GRAAEPWEVAATIAFLA  247 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTT-SSCCCHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999999876543 3344455556666 89999999999999999


Q ss_pred             cC--CCcccceEEecCCcc
Q psy12833        236 TN--PLINGEVIRIDGALR  252 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~  252 (254)
                      ++  .+++||+|.+|||++
T Consensus       248 s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          248 SDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             SGGGTTCCSCEEEESSCCC
T ss_pred             CccccCccCCEEEEcCCcC
Confidence            74  789999999999985

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1e-47  Score=319.90  Aligned_cols=237  Identities=19%  Similarity=0.233  Sum_probs=209.0

Q ss_pred             CCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++  |||++++++|+++|++|++++|+.+..+...+..  ..++.+++||++|+++++++++++.+.++
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            6799999999986  9999999999999999999999875444333221  23578999999999999999999999999


Q ss_pred             CCcEEEeCCccCCC----ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         78 KLDVNVNCAGISCA----FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        78 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                      ++|++|||||+...    .++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+.
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--------~g~IV~isS~~~~  173 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVD------TSLGNFLTSMHISCYSFTYIASKAEPLMTN--------GGSILTLSYYGAE  173 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--------CEEEEEEECGGGT
T ss_pred             CCCEEEECCCcCCcccccCChhh------CCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------CCEEEEEEehhhc
Confidence            99999999998754    33444      799999999999999999999999998865        4899999999999


Q ss_pred             cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        154 EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      .+.+++..|++||+|+++|+++++.|++++||+||+|+||+++|++.....  ++..+......|. ++..+|||+|+.+
T Consensus       174 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v  252 (296)
T 3k31_A          174 KVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL-RRNTTLDDVGGAA  252 (296)
T ss_dssp             SCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT-SSCCCHHHHHHHH
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC-CCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999999999999876654  3344556667787 9999999999999


Q ss_pred             HHHhcC--CCcccceEEecCCccc
Q psy12833        232 QSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       232 ~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +||+++  .++||++|.+|||+++
T Consensus       253 ~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          253 LYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHcCCccCCccCCEEEECCCccc
Confidence            999974  7999999999999986

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.9e-48  Score=317.38  Aligned_cols=235  Identities=29%  Similarity=0.426  Sum_probs=207.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|++++++. +.+++..+++   +.++.++++|++|+++++++++++.+.+|
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999987654 4555555544   67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-C
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-Q  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-~  156 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++++.|.|.+        .++||++||..+..+ .
T Consensus       109 ~iD~lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--------~g~iv~isS~~~~~~~~  174 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEE------TTVADFDEVMAVNFRAPFVAIRSASRHLGD--------GGRIITIGSNLAELVPW  174 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--------TCEEEEECCGGGTCCCS
T ss_pred             CCcEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--------CCEEEEEeChhhccCCC
Confidence            9999999999876666655      799999999999999999999999999854        589999999877655 7


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|+++|+|+++|+++++.|++++||+||+|+||+++|++..... +..+...+..|. +++.+|||+|+.++||++
T Consensus       175 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~-~r~~~pedvA~~v~fL~s  252 (271)
T 3v2g_A          175 PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG-DHAEAQRERIAT-GSYGEPQDIAGLVAWLAG  252 (271)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC-SSHHHHHHTCTT-SSCBCHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc-hhHHHHHhcCCC-CCCCCHHHHHHHHHHHhC
Confidence            889999999999999999999999999999999999999999875432 223444556777 999999999999999996


Q ss_pred             --CCCcccceEEecCCcc
Q psy12833        237 --NPLINGEVIRIDGALR  252 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~  252 (254)
                        +.++|||+|.+|||++
T Consensus       253 ~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          253 PQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             cccCCccCCEEEeCcCcc
Confidence              4799999999999986

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-47  Score=316.27  Aligned_cols=243  Identities=28%  Similarity=0.467  Sum_probs=211.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++++|++|+++++++++++.+.++++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999999888877777663  268889999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++...  ...++||++||..+..+.++.
T Consensus       107 D~lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~--~~~g~iV~isS~~~~~~~~~~  178 (276)
T 2b4q_A          107 DILVNNAGTSWGAALES------YPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA--ENPARVINIGSVAGISAMGEQ  178 (276)
T ss_dssp             SEEEECCCCCCCCCTTS------CCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS--SSCEEEEEECCGGGTCCCCCS
T ss_pred             CEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC--CCCCEEEEECCHHHcCCCCCC
Confidence            99999999875544444      7889999999999999999999999999876410  012899999999999988888


Q ss_pred             c-cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHh--cCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        160 V-AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR--SIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       160 ~-~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      . .|+++|+++++|+++++.|++++||+||+|+||+++|++.....+...+.+..  ..|. +++.+|+|+|+.+++|++
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s  257 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPM-GRWGRPEEMAALAISLAG  257 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTT-SSCCCHHHHHHHHHHHHS
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCC-CCcCCHHHHHHHHHHHhC
Confidence            8 99999999999999999999999999999999999999875432222233333  5676 899999999999999997


Q ss_pred             C--CCcccceEEecCCccc
Q psy12833        237 N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~  253 (254)
                      +  .+++|++|.+|||++|
T Consensus       258 ~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          258 TAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             GGGTTCCSCEEEESTTTTC
T ss_pred             ccccCCCCCEEEeCCCccC
Confidence            4  5899999999999875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.7e-47  Score=321.44  Aligned_cols=241  Identities=26%  Similarity=0.409  Sum_probs=206.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC------------CchhHHHHHH---hCCCceEEecCCCCHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP------------TSEGESVAKE---LGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~   66 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+            .+++++..++   .+.++.++++|++|+++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            679999999999999999999999999999999886            3334444333   3678999999999999999


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEE
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIIN  146 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~  146 (254)
                      ++++++.+.++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++..     .++||+
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-----~g~Iv~  192 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVS------LTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ-----GGSVIF  192 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS-----CEEEEE
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-----CCEEEE
Confidence            999999999999999999999876655555      799999999999999999999999999987631     489999


Q ss_pred             EeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--------------hHHHHHHHH
Q psy12833        147 TASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--------------NEKVRNFLA  212 (254)
Q Consensus       147 vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--------------~~~~~~~~~  212 (254)
                      +||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++....              .+...+.+.
T Consensus       193 isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (317)
T 3oec_A          193 VSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFS  272 (317)
T ss_dssp             ECCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHT
T ss_pred             ECcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999986421              111112222


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        213 RSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       213 ~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .....++++.+|||+|++++||++  +.++||++|.+|||+++
T Consensus       273 ~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          273 QLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             TTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            222233778899999999999997  47999999999999875

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.3e-47  Score=311.82  Aligned_cols=239  Identities=28%  Similarity=0.408  Sum_probs=201.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+. +++++..++.+.++.++++|++|+++++++++++.+.++++|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999998 666654455567899999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++..
T Consensus        85 ~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~  152 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDE------LTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG------WGRIINLTSTTYWLKIEAYT  152 (249)
T ss_dssp             EEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGGSCCSSCH
T ss_pred             EEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CeEEEEEcchhhccCCCCch
Confidence            9999999876555555      78999999999999999999999999998875      68999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc-cchHHHHHHHHhc-CCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS-MLNEKVRNFLARS-IPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      .|+++|+++++|+++++.|++++||+||+|+||+++|++.. .......+..... .|. +++.+|+|+|+.+++|+++ 
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~~~~l~s~~  231 (249)
T 2ew8_A          153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAI-PRLQVPLDLTGAAAFLASDD  231 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSS-CSCCCTHHHHHHHHHHTSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCcc-CCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999865 3221100111111 455 8899999999999999974 


Q ss_pred             -CCcccceEEecCCccc
Q psy12833        238 -PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 -~~~~G~~i~~~gG~~~  253 (254)
                       .+++|++|.+|||++.
T Consensus       232 ~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          232 ASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             GTTCCSCEEEESSSCCC
T ss_pred             cCCCCCcEEEECCCccC
Confidence             6899999999999874

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.6e-47  Score=312.37  Aligned_cols=239  Identities=26%  Similarity=0.363  Sum_probs=211.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..+++    +.++.+++||++|+++++++++++.+.++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            67999999999999999999999999999999999988777766655    66789999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.+
T Consensus        85 ~id~lv~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  152 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIME------AADEKWQFYWELLVMAAVRLARGLVPGMRARG------GGAIIHNASICAVQPLW  152 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCT
T ss_pred             CCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEECchhhcCCCC
Confidence            9999999999875544444      78999999999999999999999999998765      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhc-CCCCCCCCCHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARS-IPAPQRLGHPD  225 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~  225 (254)
                      +...|+++|+++++++++++.|++++||+||+++||+++|++.....           ++..+.+... .|. +++.+|+
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~  231 (263)
T 3ai3_A          153 YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI-KRFASPE  231 (263)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTT-CSCBCHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCC-CCCcCHH
Confidence            99999999999999999999999999999999999999999865431           2222333344 676 8999999


Q ss_pred             HHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        226 EFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       226 ~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+|+.+++|+++  .+++|++|.+|||+++
T Consensus       232 dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          232 ELANFFVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence            999999999974  5899999999999864

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.4e-47  Score=316.29  Aligned_cols=240  Identities=29%  Similarity=0.434  Sum_probs=213.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999988777766655   667899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQL--IHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.  |.++.      .++||++||..+..+.
T Consensus       100 iD~lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~------~g~iv~isS~~~~~~~  167 (277)
T 2rhc_B          100 VDVLVNNAGRPGGGATAE------LADELWLDVVETNLTGVFRVTKQVLKAGGMLERG------TGRIVNIASTGGKQGV  167 (277)
T ss_dssp             CSEEEECCCCCCCSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT------EEEEEEECCGGGTSCC
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC------CeEEEEECccccccCC
Confidence            999999999876555555      789999999999999999999999998  87765      5899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhcCCCCCCCCCHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  225 (254)
                      ++...|+++|+++++|+++++.|++++||+||+|+||+++|++.....           ++..+.+....|. +++.+|+
T Consensus       168 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~  246 (277)
T 2rhc_B          168 VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPS  246 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTT-SSCBCHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCC-CCCcCHH
Confidence            999999999999999999999999999999999999999999865431           2223334455676 8999999


Q ss_pred             HHHHHHHHHhcC--CCcccceEEecCCcccC
Q psy12833        226 EFAQLVQSIITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       226 ~va~~~~~l~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      |+|+.+++|+++  .+++|++|.+|||++.+
T Consensus       247 dvA~~v~~l~s~~~~~~tG~~~~vdGG~~~~  277 (277)
T 2rhc_B          247 EVAEMVAYLIGPGAAAVTAQALNVCGGLGNY  277 (277)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHhCchhcCCCCcEEEECCCcccC
Confidence            999999999974  58999999999999865

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.6e-47  Score=318.08  Aligned_cols=243  Identities=22%  Similarity=0.283  Sum_probs=210.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee-CCCchhHHHHHHh----CCCceEEecCCCCHH-------------
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKEL----GPDVKFAPVDVTSEE-------------   63 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~----~~~~~~~~~Dls~~~-------------   63 (254)
                      |++|++|||||++|||++++++|+++|++|++++ |+.+.+++..+++    +.++.++++|++|++             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            5789999999999999999999999999999999 9888777766654    567899999999999             


Q ss_pred             ----HHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCC--------------HHHHHHHHHHHhHHHHHHHHH
Q psy12833         64 ----DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHS--------------LDDFKRILLVNTVGTFNVARL  125 (254)
Q Consensus        64 ----~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~  125 (254)
                          +++++++++.+.++++|++|||||.....++.+      .+              .++|++.+++|+.+++++++.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR------NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhh------cCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                999999999999999999999999875544433      56              899999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH
Q psy12833        126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE  205 (254)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~  205 (254)
                      ++|.|.++........++||++||..+..+.++...|+++|+++++|+++++.|++++||+||+|+||+++|++ + ..+
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~~  238 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MPP  238 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SCH
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CCH
Confidence            99999875321112248999999999999999999999999999999999999999999999999999999999 5 334


Q ss_pred             HHHHHHHhcCCCCC-CCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        206 KVRNFLARSIPAPQ-RLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       206 ~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +..+.+....|. + +..+|||+|+.++||++  +.+++|++|.+|||+++
T Consensus       239 ~~~~~~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          239 AVWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             HHHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhhCCC-CCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            444455556676 6 89999999999999997  47999999999999876

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.3e-48  Score=317.13  Aligned_cols=239  Identities=32%  Similarity=0.510  Sum_probs=210.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999988888877777667889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++...
T Consensus        83 lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  150 (254)
T 1hdc_A           83 LVNNAGISTGMFLET------ESVERFRKVVEINLTGVFIGMKTVIPAMKDAG------GGSIVNISSAAGLMGLALTSS  150 (254)
T ss_dssp             EEECCCCCCCSCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCTTCHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CCEEEEECchhhccCCCCchh
Confidence            999999876555544      78999999999999999999999999998875      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHhcC--C
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLG-HPDEFAQLVQSIITN--P  238 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~~~--~  238 (254)
                      |+++|+++++|+++++.|++++||+||+++||+++|++.....++..+.+....|. +++. +|+|+|+.+++++++  .
T Consensus       151 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~-~~~~~~~~dvA~~v~~l~s~~~~  229 (254)
T 1hdc_A          151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPM-GRVGNEPGEIAGAVVKLLSDTSS  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTT-SSCB-CHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCC-CCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999998643211111111223455 7788 999999999999974  5


Q ss_pred             CcccceEEecCCccc
Q psy12833        239 LINGEVIRIDGALRM  253 (254)
Q Consensus       239 ~~~G~~i~~~gG~~~  253 (254)
                      +++|+.+.+|||+++
T Consensus       230 ~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          230 YVTGAELAVDGGWTT  244 (254)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             CCCCCEEEECCCccc
Confidence            899999999999864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-47  Score=314.20  Aligned_cols=236  Identities=32%  Similarity=0.471  Sum_probs=210.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            67899999999999999999999999999999999988877776665   557889999999999999999999999999


Q ss_pred             CcEEEeCCccC-CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGIS-CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||.. ...++.+      .+.++|++.+++|+.+++++++++.|.|.++.      .++||++||..+..+.+
T Consensus        85 id~lv~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  152 (262)
T 1zem_A           85 IDFLFNNAGYQGAFAPVQD------YPSDDFARVLTINVTGAFHVLKAVSRQMITQN------YGRIVNTASMAGVKGPP  152 (262)
T ss_dssp             CCEEEECCCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCHHHHSCCT
T ss_pred             CCEEEECCCCCCCCCcccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEcchhhccCCC
Confidence            99999999986 4444444      78999999999999999999999999998765      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---------------hHH-HHHHHHhcCCCCCCC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---------------NEK-VRNFLARSIPAPQRL  221 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---------------~~~-~~~~~~~~~~~~~~~  221 (254)
                      +...|+++|+++++|+++++.|++++||+||+|+||+++|++....               .++ ..+.+....|. +++
T Consensus       153 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~  231 (262)
T 1zem_A          153 NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRY  231 (262)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-SSC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC-CCC
Confidence            9999999999999999999999999999999999999999986542               122 33444456777 899


Q ss_pred             CCHHHHHHHHHHHhcC--CCcccceEEecCC
Q psy12833        222 GHPDEFAQLVQSIITN--PLINGEVIRIDGA  250 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~--~~~~G~~i~~~gG  250 (254)
                      .+|+|+|+.++||+++  .++||++|.+|||
T Consensus       232 ~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          232 GDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             BCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             cCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            9999999999999974  6999999999998

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-47  Score=311.23  Aligned_cols=238  Identities=30%  Similarity=0.434  Sum_probs=210.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999988777766655   56789999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++..     .++||++||..+..+.++..
T Consensus        82 ~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~  150 (256)
T 1geg_A           82 VIVNNAGVAPSTPIES------ITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-----GGKIINACSQAGHVGNPELA  150 (256)
T ss_dssp             EEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-----CEEEEEECCGGGTSCCTTBH
T ss_pred             EEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-----CCEEEEECchhhcCCCCCch
Confidence            9999999876555555      789999999999999999999999999987531     37999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhcCCCCCCCCCHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~va~  229 (254)
                      .|+++|+++++|+++++.|++++||+||+|+||+++|++.....           ++..+.+.+..|. +++.+|+|+|+
T Consensus       151 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~  229 (256)
T 1geg_A          151 VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAA  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT-CSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCC-CCCcCHHHHHH
Confidence            99999999999999999999999999999999999999865431           1222334455666 89999999999


Q ss_pred             HHHHHhcC--CCcccceEEecCCccc
Q psy12833        230 LVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       230 ~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      .+++|+++  .+++|++|.+|||+++
T Consensus       230 ~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          230 CVSYLASPDSDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHHhCccccCCCCCEEEeCCCccC
Confidence            99999974  5899999999999875

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.3e-47  Score=317.29  Aligned_cols=236  Identities=20%  Similarity=0.264  Sum_probs=203.7

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCchhH---HHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSEGE---SVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||+  +|||++++++|+++|++|++++|+.+..+   +..++. .++.+++||++|+++++++++++.+.+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            689999999999  55999999999999999999999854322   222233 468899999999999999999999999


Q ss_pred             CCCcEEEeCCccCC----CccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         77 GKLDVNVNCAGISC----AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        77 ~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      +++|++|||||+..    ..++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--------~g~Iv~isS~~~  173 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYID------TSEANFTNTMLISVYSLTAVSRRAEKLMAD--------GGSILTLTYYGA  173 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--------CEEEEEEECGGG
T ss_pred             CCCCEEEECCccCCcccccccccc------cCHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CCEEEEEeehhh
Confidence            99999999999875    233334      799999999999999999999999999865        589999999999


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      ..+.+++..|++||+|+++|+++++.|++++||+||+|+||+++|++.....  ++..+......|. ++..+|+|+|+.
T Consensus       174 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~  252 (293)
T 3grk_A          174 EKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL-RRTVTIDEVGDV  252 (293)
T ss_dssp             TSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT-SSCCCHHHHHHH
T ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC-CCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999876542  4445566667888 999999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++||+++  .++||++|.+|||+++
T Consensus       253 v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          253 GLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHcCccccCCcceEEEECCCccc
Confidence            9999974  7999999999999986

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.4e-47  Score=313.18  Aligned_cols=238  Identities=26%  Similarity=0.394  Sum_probs=214.5

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCchh-HHHHH----HhCCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSEG-ESVAK----ELGPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~~~-~~~~~----~~~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      ++||++|||||+  +|||++++++|+++|++|++++|+.+.. ++..+    +.+.++.+++||++|+++++++++++.+
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            679999999999  9999999999999999999999986654 34333    3377899999999999999999999999


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                      .++++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.+++      .++||++||..+..
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~  165 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILD------GSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG------TGSLVITASMSGHI  165 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCGGGTS
T ss_pred             HcCCCCEEEECCCcCCCCCccc------CCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC------CceEEEEccccccc
Confidence            9999999999999876655544      79999999999999999999999999999876      68999999999887


Q ss_pred             CC--CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        155 GQ--SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       155 ~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      +.  ++...|+++|+|+++|+++++.|+++. |+||+++||+++|++.+...++..+.+....|. ++..+|+|+|+.++
T Consensus       166 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~r~~~~~dva~~~~  243 (267)
T 3gdg_A          166 ANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPM-GRDGLAKELKGAYV  243 (267)
T ss_dssp             CCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHHHHHTTSTT-SSCEETHHHHHHHH
T ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHHHHHhcCCC-CCCcCHHHHHhHhh
Confidence            65  577899999999999999999999887 999999999999999887777777777778888 99999999999999


Q ss_pred             HHhcC--CCcccceEEecCCccc
Q psy12833        233 SIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +|+++  .++||++|.+|||+++
T Consensus       244 ~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          244 YFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             HHHSTTCTTCCSCEEEESTTGGG
T ss_pred             eeecCccccccCCEEEECCceec
Confidence            99974  7999999999999985

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=4e-48  Score=316.53  Aligned_cols=236  Identities=25%  Similarity=0.388  Sum_probs=194.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|+++ .|+.+..++..+++   +.++.+++||++|+++++++++++.+.++
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999998 55555566555554   67799999999999999999999999999


Q ss_pred             CCcEEEeCCccC-CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cC
Q psy12833         78 KLDVNVNCAGIS-CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EG  155 (254)
Q Consensus        78 ~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~  155 (254)
                      ++|++|||||.. ...++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+. .+
T Consensus        86 ~id~lv~nAg~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~  151 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAE------MDEAFWHQVLDVNLTSLFLTAKTALPKMAK--------GGAIVTFSSQAGRDGG  151 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEECCHHHHHCC
T ss_pred             CCCEEEECCCccCCCCChhh------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCEEEEEcCHHhccCC
Confidence            999999999976 3333434      799999999999999999999999999865        4899999999998 67


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .++...|++||+|+++|+++++.|+++. |+||+++||+++|++.+... ++..+.+....|. ++..+|||+|+.++||
T Consensus       152 ~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~-~r~~~pedva~~v~~L  229 (259)
T 3edm_A          152 GPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSL-KREGSSEDVAGLVAFL  229 (259)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            8889999999999999999999999887 99999999999999886653 3444555556677 8999999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.++||++|.+|||+++
T Consensus       230 ~s~~~~~itG~~i~vdGg~~~  250 (259)
T 3edm_A          230 ASDDAAYVTGACYDINGGVLF  250 (259)
T ss_dssp             HSGGGTTCCSCEEEESBCSSB
T ss_pred             cCccccCccCCEEEECCCcCC
Confidence            97  37999999999999875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.3e-47  Score=313.76  Aligned_cols=238  Identities=24%  Similarity=0.375  Sum_probs=207.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+.+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999988777766655     2378899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      + +|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.
T Consensus        85 g-id~lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  151 (260)
T 2z1n_A           85 G-ADILVYSTGGPRPGRFME------LGVEDWDESYRLLARSAVWVGRRAAEQMVEKG------WGRMVYIGSVTLLRPW  151 (260)
T ss_dssp             C-CSEEEECCCCCCCBCGGG------CCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCC
T ss_pred             C-CCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEECchhhcCCC
Confidence            8 999999999866555555      78999999999999999999999999998775      6899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc----------cchHHH-HHHHHhcCCCCCCCCCHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS----------MLNEKV-RNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~  225 (254)
                      ++...|+++|+++++|+++++.|++++||+||+++||+++|++..          ...++. .+.+....|. +++.+|+
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~  230 (260)
T 2z1n_A          152 QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPM-GRVGKPE  230 (260)
T ss_dssp             TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTT-SSCCCHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCC-CCccCHH
Confidence            999999999999999999999999999999999999999999875          222221 2333445566 8899999


Q ss_pred             HHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        226 EFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       226 ~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+|+.+++|+++  .+++|++|.+|||+++
T Consensus       231 dva~~v~~l~s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          231 ELASVVAFLASEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence            999999999974  7899999999999875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.3e-48  Score=319.89  Aligned_cols=237  Identities=24%  Similarity=0.333  Sum_probs=198.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC---chhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT---SEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.   +.++++.+++   +.++.+++||++|+++++++++++.+.
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999987753   3455555554   567899999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+..+
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--------~g~iv~isS~~~~~~  154 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVE------TSEAEFDAMDTINNKVAYFFIKQAAKHMNP--------NGHIITIATSLLAAY  154 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--------EEEEEEECCCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--------CCEEEEEechhhccC
Confidence            999999999999877666655      799999999999999999999999999832        589999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .++...|++||+|+++|+++++.|++++||+||+++||+++|++.... .++..+......|. +++.+|||+|+.++||
T Consensus       155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L  233 (262)
T 3ksu_A          155 TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMG-NQLTKIEDIAPIIKFL  233 (262)
T ss_dssp             HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CC-CCSCCGGGTHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcc-cCCCCHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999987553 23333444555666 8999999999999999


Q ss_pred             hc-CCCcccceEEecCCccc
Q psy12833        235 IT-NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~-~~~~~G~~i~~~gG~~~  253 (254)
                      ++ +.++||++|.+|||+++
T Consensus       234 ~s~~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          234 TTDGWWINGQTIFANGGYTT  253 (262)
T ss_dssp             HTTTTTCCSCEEEESTTCCC
T ss_pred             cCCCCCccCCEEEECCCccC
Confidence            98 57899999999999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5.5e-47  Score=309.99  Aligned_cols=239  Identities=26%  Similarity=0.432  Sum_probs=211.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc-C
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF-G   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~   77 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+ +
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999988777766655   5578899999999999999999999999 8


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.+
T Consensus        87 ~id~lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  154 (260)
T 2ae2_A           87 KLNILVNNAGIVIYKEAKD------YTVEDYSLIMSINFEAAYHLSVLAHPFLKASE------RGNVVFISSVSGALAVP  154 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS------SEEEEEECCGGGTSCCT
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEcchhhccCCC
Confidence            9999999999875555545      78999999999999999999999999998875      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHH---HHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRN---FLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      +...|+++|+++++|+++++.|++++||+||+++||+++|++.....  +...+   .+....|. ++..+|+|+|+.++
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v~  233 (260)
T 2ae2_A          155 YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-RRMGEPKELAAMVA  233 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT-CSCBCHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCC-CCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999865321  22222   34455676 88999999999999


Q ss_pred             HHhcC--CCcccceEEecCCccc
Q psy12833        233 SIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +|+++  .+++|+++.+|||+++
T Consensus       234 ~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          234 FLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHcCccccCCCCCEEEECCCccc
Confidence            99974  6899999999999864

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.1e-47  Score=314.98  Aligned_cols=231  Identities=26%  Similarity=0.414  Sum_probs=207.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.++.        ...+++|++|.++++++++++.+.++++|+
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA--------DLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC--------SEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh--------hhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            579999999999999999999999999999999998765432        244689999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus        98 lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~~~~~~~~~~~  165 (266)
T 3uxy_A           98 VVNNAGVISRGRITE------TTDADWSLSLGVNVEAPFRICRAAIPLMAAAG------GGAIVNVASCWGLRPGPGHAL  165 (266)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCSBTTBCCTTBHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEECCHHhCCCCCCChH
Confidence            999999887666655      79999999999999999999999999999876      799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-------HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-------EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.+...       ++..+.+....|. +++.+|||+|+.++||
T Consensus       166 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L  244 (266)
T 3uxy_A          166 YCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFL  244 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999865422       2233556667777 9999999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .++||++|.+|||+++
T Consensus       245 ~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          245 ASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             hCchhcCCcCCEEEECcCEeC
Confidence            974  6999999999999986

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2.1e-47  Score=313.61  Aligned_cols=235  Identities=29%  Similarity=0.405  Sum_probs=204.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +..+.++.+|++|+++++++++    ++
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~   83 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KY   83 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----HC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----hc
Confidence            57899999999999999999999999999999999988887777665     3457889999999998887764    56


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+.
T Consensus        84 g~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  151 (267)
T 3t4x_A           84 PKVDILINNLGIFEPVEYFD------IPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK------EGRVIFIASEAAIMPS  151 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------EEEEEEECCGGGTSCC
T ss_pred             CCCCEEEECCCCCCCCcccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CCEEEEEcchhhccCC
Confidence            89999999999877666655      79999999999999999999999999998876      6899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHH-HHHh---cCCCCCCC
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRN-FLAR---SIPAPQRL  221 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~-~~~~---~~~~~~~~  221 (254)
                      ++...|++||+|+++|+++++.|++++||+||+++||+++|++.+...           ++..+ ....   ..|. +++
T Consensus       152 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~  230 (267)
T 3t4x_A          152 QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSII-QRL  230 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSS-CSC
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccc-cCc
Confidence            999999999999999999999999999999999999999999764321           11112 2222   2345 899


Q ss_pred             CCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        222 GHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       222 ~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .+|||+|++++||++  +.++|||+|.+|||++.
T Consensus       231 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  264 (267)
T 3t4x_A          231 IRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVR  264 (267)
T ss_dssp             BCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             cCHHHHHHHHHHHcCccccCccCCeEEECCCccc
Confidence            999999999999997  47999999999999863

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-47  Score=309.62  Aligned_cols=236  Identities=33%  Similarity=0.512  Sum_probs=207.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+. ++..+++. + .++++|++|+++++++++++.+.++++|+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            679999999999999999999999999999999999887 66666665 4 88999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus        81 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~------~g~iv~isS~~~~~~~~~~~~  148 (256)
T 2d1y_A           81 LVNNAAIAAPGSALT------VRLPEWRRVLEVNLTAPMHLSALAAREMRKVG------GGAIVNVASVQGLFAEQENAA  148 (256)
T ss_dssp             EEECCCCCCCBCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT------CEEEEEECCGGGTSBCTTBHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEEccccccCCCCCChh
Confidence            999999875554444      78999999999999999999999999998765      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      |+++|+++++|+++++.|++++||+||+++||+++|++....      .++..+.+....|. +++.+|+|+|+.+++++
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~  227 (256)
T 2d1y_A          149 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFLA  227 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999986432      12222334445566 88999999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .+++|+++.+|||+++
T Consensus       228 s~~~~~~~G~~~~v~gG~~~  247 (256)
T 2d1y_A          228 SEKASFITGAILPVDGGMTA  247 (256)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCCCCCEEEECCCccc
Confidence            74  5899999999999864

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-47  Score=313.75  Aligned_cols=236  Identities=31%  Similarity=0.489  Sum_probs=210.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..+++..++.++++|++|+++++++++++.+.++++|+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            67999999999999999999999999999999999998888888777777899999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++++.|.| ++       .++||++||..+. +.++...
T Consensus        84 lvnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-------~g~iv~isS~~~~-~~~~~~~  148 (263)
T 2a4k_A           84 VAHFAGVAHSALSWN------LPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-------GGSLVLTGSVAGL-GAFGLAH  148 (263)
T ss_dssp             EEEGGGGTTTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-------TCEEEEECCCTTC-CHHHHHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-------CCEEEEEecchhc-CCCCcHH
Confidence            999999875554444      7899999999999999999999999998 43       4899999999998 7777889


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~  239 (254)
                      |+++|+++++|+++++.|++++||+||+++||+++|++.....++..+.+....|. ++..+|+|+|+.+++++++  .+
T Consensus       149 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~s~~~~~  227 (263)
T 2a4k_A          149 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAY  227 (263)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999998766544444555566777 8999999999999999974  68


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      ++|+.+.+|||+++
T Consensus       228 ~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          228 ITGQALYVDGGRSI  241 (263)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CcCCEEEECCCccc
Confidence            99999999999875

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.4e-47  Score=309.95  Aligned_cols=230  Identities=24%  Similarity=0.372  Sum_probs=205.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++      .++.++++|++|+++++++++++.+.++++|+
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD------PDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS------TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------CceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            578999999999999999999999999999999998765432      36889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC--CCCC
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--QSGQ  159 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~--~~~~  159 (254)
                      +|||||+....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+  .++.
T Consensus       100 lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~~~~~~~~~~~  167 (260)
T 3un1_A          100 LVNNAGVFLAKPFVE------MTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG------SGHIVSITTSLVDQPMVGMPS  167 (260)
T ss_dssp             EEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCTTTTSCBTTCCC
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CcEEEEEechhhccCCCCCcc
Confidence            999999877666655      79999999999999999999999999999876      799999999887754  4456


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL  239 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  239 (254)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++....   ..+.+....|. +++.+|+|+|+++++|..+++
T Consensus       168 ~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~p~-~r~~~~~dva~av~~L~~~~~  243 (260)
T 3un1_A          168 ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---THSTLAGLHPV-GRMGEIRDVVDAVLYLEHAGF  243 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---GHHHHHTTSTT-SSCBCHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---HHHHHhccCCC-CCCcCHHHHHHHHHHhcccCC
Confidence            89999999999999999999999999999999999999987542   23444556677 999999999999999977889


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      ++|++|.+|||+++
T Consensus       244 itG~~i~vdGG~~~  257 (260)
T 3un1_A          244 ITGEILHVDGGQNA  257 (260)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CCCcEEEECCCeec
Confidence            99999999999875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-46  Score=308.79  Aligned_cols=240  Identities=30%  Similarity=0.439  Sum_probs=212.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..++.++++|++|+++++++++++.+.++++|+
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56899999999999999999999999999999999988888777776667889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++++.|.|.++..     .++||++||..+..+.++...
T Consensus        90 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~  158 (263)
T 3ak4_A           90 LCANAGVSTMRPAVD------ITDEEWDFNFDVNARGVFLANQIACRHFLASNT-----KGVIVNTASLAAKVGAPLLAH  158 (263)
T ss_dssp             EEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-----CCEEEEECCGGGTSCCTTCHH
T ss_pred             EEECCCcCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CeEEEEecccccccCCCCchh
Confidence            999999876555555      789999999999999999999999999987531     389999999999999899999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      |+++|+++++|+++++.|++++||+|++++||+++|++.....           ++..+.+....|. +++.+|+|+|+.
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~  237 (263)
T 3ak4_A          159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL-GRIEEPEDVADV  237 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTT-CSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            9999999999999999999999999999999999999865431           2233344455676 889999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++++++  .+++|++|.+|||+++
T Consensus       238 v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          238 VVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHhCccccCCCCCEEEECcCEeC
Confidence            9999974  5899999999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.9e-47  Score=317.51  Aligned_cols=237  Identities=29%  Similarity=0.475  Sum_probs=208.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHH-HHH---HhCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGES-VAK---ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~-~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+...+ ..+   +.+.++.++++|++|+++++++++++.+.++
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999998764333 222   2367899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      ++|++|||||.... .++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+..+.
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--------~g~iv~isS~~~~~~~  190 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEY------ITAEQLEKTFRINIFSYFHVTKAALSHLKQ--------GDVIINTASIVAYEGN  190 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGG------CCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--------TCEEEEECCTHHHHCC
T ss_pred             CCCEEEECCCCcCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--------CCEEEEEechHhcCCC
Confidence            99999999997643 33444      789999999999999999999999998854        4799999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ++...|+++|+|+++|+++++.|++++||+||+|+||+++|++.... .++..+.+....|. ++..+|||+|+.++||+
T Consensus       191 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~L~  269 (291)
T 3ijr_A          191 ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPM-QRPGQPYELAPAYVYLA  269 (291)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTT-SSCBCGGGTHHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999986432 34444455566777 99999999999999999


Q ss_pred             c--CCCcccceEEecCCccc
Q psy12833        236 T--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~--~~~~~G~~i~~~gG~~~  253 (254)
                      +  +.++||++|.+|||+++
T Consensus       270 s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          270 SSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             SGGGTTCCSCEEEESSSCCC
T ss_pred             CCccCCCcCCEEEECCCccc
Confidence            7  47899999999999986

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-47  Score=310.07  Aligned_cols=238  Identities=25%  Similarity=0.373  Sum_probs=202.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHH-HHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESV-AKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~-~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      .+|++|||||++|||++++++|+++|++|++++|+.+...+. .+.+   +.++.+++||++|+++++++++++.+.+++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            469999999999999999999999999999998876554333 3322   467899999999999999999999999999


Q ss_pred             CcEEEeCCcc--CCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc-cc-cc
Q psy12833         79 LDVNVNCAGI--SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI-AA-YE  154 (254)
Q Consensus        79 id~li~~ag~--~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~-~~-~~  154 (254)
                      +|++|||||.  ....++.+      .+.++|++.+++|+.+++++++.++|.|.+++      .++||++||. .+ ..
T Consensus        86 id~lv~~Ag~~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~g~iv~iss~~~~~~~  153 (264)
T 3i4f_A           86 IDFLINNAGPYVFERKKLVD------YEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN------FGRIINYGFQGADSAP  153 (264)
T ss_dssp             CCEEECCCCCCCCSCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCTTGGGCC
T ss_pred             CCEEEECCcccccCCCcccc------CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC------CCeEEEEeechhcccC
Confidence            9999999994  33344444      78999999999999999999999999998876      6899999998 44 55


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +.++...|+++|+|+++|+++++.|++++||+|++++||+++|++.....++..+......|. ++..+|||+|+.+++|
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~l  232 (264)
T 3i4f_A          154 GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPI-GRSGTGEDIARTISFL  232 (264)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC---------CCCCHHHHHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCC-CCCcCHHHHHHHHHHH
Confidence            677788999999999999999999999999999999999999999887776666656666777 8999999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.+++||+|.+|||+++
T Consensus       233 ~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          233 CEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             HSGGGTTCCSCEEEESCSCCC
T ss_pred             cCcccCCCCCcEEEEcCceee
Confidence            97  46899999999999975

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=9.1e-47  Score=309.25  Aligned_cols=252  Identities=63%  Similarity=0.982  Sum_probs=213.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            57899999999999999999999999999999999999888888888888999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+.....+.+.++|++.+++|+.+++++++++.|.|.++........++||++||..+..+.++...
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  169 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA  169 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred             EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCch
Confidence            99999986554433211111268899999999999999999999999998762211112689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcc
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN  241 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  241 (254)
                      |+++|++++.|++.++.|++++||++++++||+++|++.....++..+.+....|.++++.+|+|+|+.+++++++++++
T Consensus       170 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  249 (265)
T 2o23_A          170 YSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN  249 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHCTTCC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhcCccC
Confidence            99999999999999999999999999999999999998765444333444455555478899999999999999989999


Q ss_pred             cceEEecCCccc
Q psy12833        242 GEVIRIDGALRM  253 (254)
Q Consensus       242 G~~i~~~gG~~~  253 (254)
                      |++|.+|||+++
T Consensus       250 G~~i~vdgG~~~  261 (265)
T 2o23_A          250 GEVIRLDGAIRM  261 (265)
T ss_dssp             SCEEEESTTCCC
T ss_pred             ceEEEECCCEec
Confidence            999999999875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2e-46  Score=305.77  Aligned_cols=237  Identities=28%  Similarity=0.458  Sum_probs=207.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+  ++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999876  3333333   567889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++
T Consensus        80 id~lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  147 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQ------FPLESWDKIIALNLSAVFHGTRLALPGMRARN------WGRIINIASVHGLVGSTG  147 (255)
T ss_dssp             CSEEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCGGGTSCCTT
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEEcCchhccCCCC
Confidence            999999999876555555      78999999999999999999999999998865      689999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---HHH---H----HHH-HhcCCCCCCCCCHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---EKV---R----NFL-ARSIPAPQRLGHPDEF  227 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~---~----~~~-~~~~~~~~~~~~~~~v  227 (254)
                      ...|+++|+++++|+++++.|++++||+||+++||+++|++.....   ++.   .    +.+ ....|. +++.+|+|+
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dv  226 (255)
T 2q2v_A          148 KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPS-LAFVTPEHL  226 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTT-CCCBCHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCC-CCCcCHHHH
Confidence            9999999999999999999999999999999999999999865432   111   1    222 334566 889999999


Q ss_pred             HHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        228 AQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       228 a~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+.+++++++  .+++|++|.+|||+++
T Consensus       227 A~~~~~l~s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          227 GELVLFLCSEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCCccCCCCCCEEEECCCccC
Confidence            9999999974  6899999999999874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=4.6e-47  Score=308.47  Aligned_cols=236  Identities=28%  Similarity=0.491  Sum_probs=200.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++..++.++.+|++|.+++++++++.    +++|+
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~id~   87 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT----SNLDI   87 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC----SCCSE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc----CCCCE
Confidence            47899999999999999999999999999999999999999988888888999999999999988887644    78999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||......+.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++...
T Consensus        88 li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  155 (249)
T 3f9i_A           88 LVCNAGITSDTLAIR------MKDQDFDKVIDINLKANFILNREAIKKMIQKR------YGRIINISSIVGIAGNPGQAN  155 (249)
T ss_dssp             EEECCC-------------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCCCC--CCSCSHH
T ss_pred             EEECCCCCCCCcccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CcEEEEEccHHhccCCCCCch
Confidence            999999876554444      67889999999999999999999999998876      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |+++|+|+++|+++++.|++++||++++++||+++|++.....++..+.+....|. +++.+|+|+|+.+++|++  +.+
T Consensus       156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~  234 (249)
T 3f9i_A          156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPL-GTYGIPEDVAYAVAFLASNNASY  234 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCCccCC
Confidence            99999999999999999999999999999999999999887777766777777887 999999999999999997  378


Q ss_pred             cccceEEecCCcccC
Q psy12833        240 INGEVIRIDGALRMI  254 (254)
Q Consensus       240 ~~G~~i~~~gG~~~~  254 (254)
                      ++|++|.+|||++++
T Consensus       235 ~tG~~~~vdgG~~~~  249 (249)
T 3f9i_A          235 ITGQTLHVNGGMLMV  249 (249)
T ss_dssp             CCSCEEEESTTSSCC
T ss_pred             ccCcEEEECCCEeeC
Confidence            999999999999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=9.9e-47  Score=307.11  Aligned_cols=229  Identities=22%  Similarity=0.301  Sum_probs=202.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCC--CCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDV--TSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl--s~~~~~~~~~~~~~~~   75 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|+  +|+++++++++++.+.
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999988887776655    44789999999  9999999999999999


Q ss_pred             cCCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         76 FGKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        76 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                      ++++|++|||||.... .++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~------~g~iv~isS~~~~~  157 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSE------QNPQVWQDVMQVNVNATFMLTQALLPLLLKSD------AGSLVFTSSSVGRQ  157 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS------SCEEEEECCGGGTS
T ss_pred             CCCCCEEEECCccCCCCCCccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC------CCEEEEECChhhcc
Confidence            9999999999998532 33434      79999999999999999999999999998876      78999999999999


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +.++...|++||+|+++|+++++.|+++. |+||+|+||+++|++....        ....+. .++.+|+|+|+.++||
T Consensus       158 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~--------~~~~~~-~~~~~p~dva~~~~~L  227 (252)
T 3f1l_A          158 GRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASA--------FPTEDP-QKLKTPADIMPLYLWL  227 (252)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHH--------CTTCCG-GGSBCTGGGHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhh--------CCccch-hccCCHHHHHHHHHHH
Confidence            99999999999999999999999999887 9999999999999875321        111222 6678999999999999


Q ss_pred             hcC--CCcccceEEecCCcc
Q psy12833        235 ITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~  252 (254)
                      +++  .++||++|.+|||..
T Consensus       228 ~s~~~~~itG~~i~vdgG~~  247 (252)
T 3f1l_A          228 MGDDSRRKTGMTFDAQPGRK  247 (252)
T ss_dssp             HSGGGTTCCSCEEESSCC--
T ss_pred             cCccccCCCCCEEEeCCCcC
Confidence            974  699999999999975

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=9.6e-48  Score=319.74  Aligned_cols=237  Identities=29%  Similarity=0.438  Sum_probs=205.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc--hhHHHH---HHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS--EGESVA---KELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~--~~~~~~---~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+  ..+++.   ++.+.++.+++||++|+++++++++++.+.+
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999998733  333333   3347789999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||||.... .++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+..+
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--------~g~Iv~isS~~~~~~  192 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKD------LTSEQFQQTFAVNVFALFWITQEAIPLLPK--------GASIITTSSIQAYQP  192 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGG------CCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--------TCEEEEECCGGGTSC
T ss_pred             CCCCEEEECCCCcCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--------CCEEEEECChhhccC
Confidence            999999999998643 33444      799999999999999999999999998854        489999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--chHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .++...|+++|+|+++|+++++.|++++||+||+|+||+++|++...  ..++..+.+....|. ++..+|+|+|+.++|
T Consensus       193 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~  271 (294)
T 3r3s_A          193 SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM-KRAGQPAELAPVYVY  271 (294)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTT-SSCBCGGGGHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998422  122222334455666 899999999999999


Q ss_pred             Hhc--CCCcccceEEecCCccc
Q psy12833        234 IIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |++  +.++||++|.+|||+++
T Consensus       272 L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          272 LASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCccccCCCCCEEEECCCccC
Confidence            997  47999999999999986

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-46  Score=313.95  Aligned_cols=238  Identities=23%  Similarity=0.372  Sum_probs=208.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CC---CceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GP---DVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.   ++.+++||++|+++++++++++.+.
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999988877776655   33   6889999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCcc--ccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         76 FGKLDVNVNCAGISCAFK--IFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                      ++++|++|||||.....+  +.+      .+.++|++.+++|+.++++++++++|.|.++       .++||++||..+.
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-------~g~IV~isS~~~~  170 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTD------QPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-------KGEIVNVSSIVAG  170 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-------TCEEEEECCGGGS
T ss_pred             cCCCCEEEECCCcCcCCCCcccc------CCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-------CCEEEEEcCchhc
Confidence            999999999999865444  444      7899999999999999999999999999875       3899999999999


Q ss_pred             cCC-CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--h-------HHHHHHHHhcCCCCCCCCC
Q psy12833        154 EGQ-SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--N-------EKVRNFLARSIPAPQRLGH  223 (254)
Q Consensus       154 ~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~-------~~~~~~~~~~~~~~~~~~~  223 (254)
                      .+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++....  .       ++..+.+....|. +++.+
T Consensus       171 ~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~  249 (297)
T 1xhl_A          171 PQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHCGK  249 (297)
T ss_dssp             SSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBC
T ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCC-CCCcC
Confidence            888 88899999999999999999999999999999999999999986543  1       1112222334566 88999


Q ss_pred             HHHHHHHHHHHhcC---CCcccceEEecCCccc
Q psy12833        224 PDEFAQLVQSIITN---PLINGEVIRIDGALRM  253 (254)
Q Consensus       224 ~~~va~~~~~l~~~---~~~~G~~i~~~gG~~~  253 (254)
                      |+|+|+.+++|+++   .+++|++|.+|||+++
T Consensus       250 pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  282 (297)
T 1xhl_A          250 PEEIANIIVFLADRNLSSYIIGQSIVADGGSTL  282 (297)
T ss_dssp             HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCCcccCCccCcEEEECCCccc
Confidence            99999999999974   4899999999999875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-47  Score=312.15  Aligned_cols=238  Identities=24%  Similarity=0.371  Sum_probs=208.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CC---CceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GP---DVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.   ++.+++||++|+++++++++++.+.
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999988887776665   33   6889999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCcc----ccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         76 FGKLDVNVNCAGISCAFK----IFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      ++++|++|||||.....+    +.+      .+.++|++.+++|+.+++++++.+.|.|.++       .++||++||..
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-------~g~iv~isS~~  150 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTD------QGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-------KGEIVNVSSIV  150 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCCCccccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC-------CCcEEEecCcc
Confidence            999999999999865444    333      7899999999999999999999999999865       38999999999


Q ss_pred             cccCC-CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hH-------HHHHHHHhcCCCCCCC
Q psy12833        152 AYEGQ-SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NE-------KVRNFLARSIPAPQRL  221 (254)
Q Consensus       152 ~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~-------~~~~~~~~~~~~~~~~  221 (254)
                      +..+. ++...|+++|+++++|+++++.|++++||+||+|+||+++|++....  ..       +..+.+....|. +++
T Consensus       151 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~  229 (280)
T 1xkq_A          151 AGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAA  229 (280)
T ss_dssp             GSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSC
T ss_pred             ccCCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCC-CCC
Confidence            99887 88899999999999999999999999999999999999999986543  11       112222234566 889


Q ss_pred             CCHHHHHHHHHHHhcC---CCcccceEEecCCccc
Q psy12833        222 GHPDEFAQLVQSIITN---PLINGEVIRIDGALRM  253 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~---~~~~G~~i~~~gG~~~  253 (254)
                      .+|||+|+.+++|+++   .+++|++|.+|||+++
T Consensus       230 ~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          230 GKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            9999999999999974   4899999999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.5e-47  Score=311.74  Aligned_cols=237  Identities=27%  Similarity=0.418  Sum_probs=200.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC------------CchhHHHHHH---hCCCceEEecCCCCHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP------------TSEGESVAKE---LGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~   66 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+            .+.+++..++   .+.++.+++||++|+++++
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            679999999999999999999999999999999987            3344444333   3678999999999999999


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEE
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIIN  146 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~  146 (254)
                      ++++++.+.++++|++|||||.....          .+.++|++.+++|+.++++++++++|.|.++..     .++||+
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~----------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-----~g~iv~  155 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMS----------AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT-----GGSIVL  155 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCS----------STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-----CEEEEE
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCC----------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-----CcEEEE
Confidence            99999999999999999999975432          257899999999999999999999999987631     489999


Q ss_pred             EeccccccCC----CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH-HHHH-HHHhc------
Q psy12833        147 TASIAAYEGQ----SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE-KVRN-FLARS------  214 (254)
Q Consensus       147 vss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~-~~~~-~~~~~------  214 (254)
                      +||..+..+.    ++...|++||+|+++|+++++.|++++||+||+|+||+++|++...... +... .....      
T Consensus       156 isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  235 (278)
T 3sx2_A          156 ISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAM  235 (278)
T ss_dssp             ECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTT
T ss_pred             EccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhh
Confidence            9999998876    6778899999999999999999999999999999999999998764321 1111 11100      


Q ss_pred             -CCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        215 -IPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       215 -~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                       ...++++.+|||+|+.++||++  +.++||++|.+|||+++
T Consensus       236 ~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          236 GNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             hhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence             0112678899999999999997  47999999999999875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7e-47  Score=308.32  Aligned_cols=233  Identities=18%  Similarity=0.230  Sum_probs=206.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ||++|||||++|||++++++|+++|  +.|++++|+.+.++++.++++.++.++++|++|+++++++++++.+.++++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            6899999999999999999999985  78999999999998888888888999999999999999999999999999999


Q ss_pred             EEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||||.... .++.+      .+.++|++.+++|+.++++++++++|.|.++       .++||++||..+..+.++..
T Consensus        82 lvnnAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-------~g~iv~isS~~~~~~~~~~~  148 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNE------IDVNAWKKLYDINFFSIVSLVGIALPELKKT-------NGNVVFVSSDACNMYFSSWG  148 (254)
T ss_dssp             EEEECCCCCCCTTTTS------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCSCCCCSSCCSH
T ss_pred             EEECCcccCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-------CCeEEEEcCchhccCCCCcc
Confidence            9999998543 33334      7999999999999999999999999999876       48999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---------hHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---------NEKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      .|++||+|+++|+++++.|+  .||+||+|+||+++|++....         .++..+.+....|. +++.+|+|+|+.+
T Consensus       149 ~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~p~dva~~v  225 (254)
T 3kzv_A          149 AYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN-NQLLDSSVPATVY  225 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTT-C----CHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhc-CCcCCcccHHHHH
Confidence            99999999999999999998  689999999999999987543         34555666667777 9999999999999


Q ss_pred             HHHhcC---CCcccceEEecCCcc
Q psy12833        232 QSIITN---PLINGEVIRIDGALR  252 (254)
Q Consensus       232 ~~l~~~---~~~~G~~i~~~gG~~  252 (254)
                      +||+++   .++||++|.+|||..
T Consensus       226 ~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          226 AKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             HHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             HHHHhhcccCCCCccEEEecCccc
Confidence            999963   679999999999974

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.2e-46  Score=310.43  Aligned_cols=242  Identities=21%  Similarity=0.274  Sum_probs=204.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh----CCCceEEecCCCCH----HHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL----GPDVKFAPVDVTSE----EDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~----~~~~~~~~~Dls~~----~~~~~~~~~~   72 (254)
                      |++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++    +.++.++++|++|+    ++++++++++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            57899999999999999999999999999999999 877777766655    66789999999999    9999999999


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCH-----------HHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCC
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL-----------DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLR  141 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~  141 (254)
                      .+.++++|++|||||.....++.+      .+.           ++|++.+++|+.++++++++++|.|. +.......+
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~  161 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYPTPLLP------GDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRN  161 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCC
T ss_pred             HHhcCCCCEEEECCCCCCCCCccc------cCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCC
Confidence            999999999999999875544433      556           89999999999999999999999987 431111123


Q ss_pred             cEEEEEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCC-
Q psy12833        142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQR-  220 (254)
Q Consensus       142 ~~ii~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-  220 (254)
                      ++||++||..+..+.++...|+++|+++++|+++++.|++++||+||+|+||+++|+ . ...++..+.+....|. ++ 
T Consensus       162 g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~~~~~~~~~~~~p~-~r~  238 (276)
T 1mxh_A          162 LSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMPQETQEEYRRKVPL-GQS  238 (276)
T ss_dssp             EEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSCHHHHHHHHTTCTT-TSC
T ss_pred             cEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCCHHHHHHHHhcCCC-CCC
Confidence            899999999999999999999999999999999999999999999999999999999 2 3334444445555666 77 


Q ss_pred             CCCHHHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        221 LGHPDEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       221 ~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ..+|+|+|+.+++|+++  .+++|++|.+|||+++
T Consensus       239 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            89999999999999973  6899999999999876

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3.1e-46  Score=305.51  Aligned_cols=239  Identities=26%  Similarity=0.427  Sum_probs=209.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.||++|+++++++++++.+.+++
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988777666554   567889999999999999999999999999


Q ss_pred             CcEEEeCCccCC-CccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||... ..++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.+
T Consensus        92 iD~lv~~Ag~~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  159 (260)
T 2zat_A           92 VDILVSNAAVNPFFGNIID------ATEEVWDKILHVNVKATVLMTKAVVPEMEKRG------GGSVLIVSSVGAYHPFP  159 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCGGGTSCCT
T ss_pred             CCEEEECCCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CCEEEEEechhhcCCCC
Confidence            999999999753 233444      78999999999999999999999999998765      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      +...|+++|+++++|+++++.|++++||+||+++||+++|++....  .++..+.+....|. +++.+|+|+|+.+.+|+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~v~~l~  238 (260)
T 2zat_A          160 NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRI-RRLGNPEDCAGIVSFLC  238 (260)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTC-SSCBCGGGGHHHHHHHT
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999999986432  12222334445566 88999999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .+++|++|.+|||+..
T Consensus       239 s~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          239 SEDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             SGGGTTCCSCEEEESTTCCC
T ss_pred             CcccCCccCCEEEECCCccc
Confidence            74  6899999999999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-47  Score=309.35  Aligned_cols=238  Identities=32%  Similarity=0.438  Sum_probs=210.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999988888888887778999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++       .++||++||..+..+.++...
T Consensus        84 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  150 (253)
T 1hxh_A           84 LVNNAGILLPGDMET------GRLEDFSRLLKINTESVFIGCQQGIAAMKET-------GGSIINMASVSSWLPIEQYAG  150 (253)
T ss_dssp             EEECCCCCCCBCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-------CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCCCCCCCCccc------CCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-------CCEEEEEcchhhcCCCCCCcc
Confidence            999999875554444      7899999999999999999999999999765       389999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccC--CcEEEEEecCCccccccccc-hHHHHHH-HHh---cCCCCCCCCCHHHHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGA--GIRVNTIAPGLFDTPLLSML-NEKVRNF-LAR---SIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~--~i~v~~v~Pg~~~t~~~~~~-~~~~~~~-~~~---~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |+++|+++++|+++++.|++++  ||++++++||+++|++.... .++..+. +..   ..|. ++..+|+|+|+.+++|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l  229 (253)
T 1hxh_A          151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRA-GRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTT-CCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCcc-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999988  99999999999999986431 1111112 323   4455 8889999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .+++|+++.+|||++.
T Consensus       230 ~s~~~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          230 ASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             HSGGGTTCCSCEEEESSSCTT
T ss_pred             cCccccCCCCcEEEECCCccc
Confidence            974  6899999999999875

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=5e-47  Score=309.20  Aligned_cols=238  Identities=26%  Similarity=0.393  Sum_probs=209.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ||++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++   +.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999885 66777776666554   5678899999999999999999998876


Q ss_pred             C------CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         77 G------KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        77 ~------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      +      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.+        .++||++||.
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~~~iv~isS~  149 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEE------TTEQFFDRMVSVNAKAPFFIIQQALSRLRD--------NSRIINISSA  149 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--------EEEEEEECCG
T ss_pred             cccccCCcccEEEECCCCCCCCChhh------CCHHHHHHHHhhhchHHHHHHHHHHHhhCC--------CCEEEEeCCh
Confidence            4      4999999999876655555      799999999999999999999999998833        5799999999


Q ss_pred             ccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        151 AAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      .+..+.++...|+++|+|+++|+++++.|++++||+|++++||+++|++.+...  +...+......|. ++..+|+|+|
T Consensus       150 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva  228 (255)
T 3icc_A          150 ATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF-NRLGEVEDIA  228 (255)
T ss_dssp             GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT-SSCBCHHHHH
T ss_pred             hhccCCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc-CCCCCHHHHH
Confidence            999999999999999999999999999999999999999999999999886643  3334455556666 8999999999


Q ss_pred             HHHHHHhc--CCCcccceEEecCCccc
Q psy12833        229 QLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       229 ~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +.+.+|++  +++++|++|.+|||++|
T Consensus       229 ~~~~~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          229 DTAAFLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSTTC
T ss_pred             HHHHHHhCcccCCccCCEEEecCCeeC
Confidence            99999996  47899999999999876

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-46  Score=315.52  Aligned_cols=243  Identities=23%  Similarity=0.283  Sum_probs=210.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee-CCCchhHHHHHHh----CCCceEEecCCCCHH-------------
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKEL----GPDVKFAPVDVTSEE-------------   63 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~----~~~~~~~~~Dls~~~-------------   63 (254)
                      |++|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++    +.++.++++|++|++             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            6789999999999999999999999999999999 9888777766654    567899999999999             


Q ss_pred             ----HHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCC--------------HHHHHHHHHHHhHHHHHHHHH
Q psy12833         64 ----DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHS--------------LDDFKRILLVNTVGTFNVARL  125 (254)
Q Consensus        64 ----~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~  125 (254)
                          +++++++++.+.++++|+||||||+....++.+      .+              .++|+..+++|+.++++++++
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~------~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  197 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR------NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  197 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------------CHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhh------cCccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence                999999999999999999999999875544433      45              899999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH
Q psy12833        126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE  205 (254)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~  205 (254)
                      ++|.|.++........++||++||..+..+.++...|+++|+++++|+++++.|++++||+||+|+||+++|++ ... +
T Consensus       198 ~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~-~  275 (328)
T 2qhx_A          198 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP-P  275 (328)
T ss_dssp             HHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC-H
T ss_pred             HHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc-H
Confidence            99999875311112248999999999999999999999999999999999999999999999999999999998 443 3


Q ss_pred             HHHHHHHhcCCCCC-CCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        206 KVRNFLARSIPAPQ-RLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       206 ~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +..+.+....|. + +..+|||+|+.+++|++  +.+++|++|.+|||+++
T Consensus       276 ~~~~~~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          276 AVWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             HHHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhhCCC-CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            444445556676 7 89999999999999996  47999999999999875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.3e-46  Score=305.44  Aligned_cols=231  Identities=31%  Similarity=0.513  Sum_probs=198.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.++++++        ..+++|++|+++++++++++.+.++++|+
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL--------FGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS--------EEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh--------cCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999999987665432        24899999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus        85 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  152 (247)
T 1uzm_A           85 LVSNAGLSADAFLMR------MTEEKFEKVINANLTGAFRVAQRASRSMQRNK------FGRMIFIGSVSGLWGIGNQAN  152 (247)
T ss_dssp             EEEECSCCC-----C------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCCCC-----CCHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CCEEEEECCHhhccCCCCChh
Confidence            999999875544444      78999999999999999999999999998765      689999999999999889999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~  239 (254)
                      |+++|+++++|+++++.|++++||+||+++||+++|++.....++..+.+....|. ++..+|+|+|+.+++++++  .+
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~~~~  231 (247)
T 1uzm_A          153 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLASEDASY  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999999999999998765444444445556676 8899999999999999974  68


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      ++|++|.+|||+++
T Consensus       232 ~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          232 ISGAVIPVDGGMGM  245 (247)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCCEEEECCCccc
Confidence            99999999999875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-46  Score=307.45  Aligned_cols=237  Identities=22%  Similarity=0.307  Sum_probs=196.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ||++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.||++|+++++++++++.+.++
T Consensus         1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999999999999999998888877766   66788999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.+++      .|+||++||..+..+.+
T Consensus        81 ~iD~lVnnAG~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~IV~isS~~~~~~~~  148 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAA------VKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR------SGQIINIGSIGALSVVP  148 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTCCCT
T ss_pred             CCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CeEEEEEcCHHHcccCC
Confidence            9999999999876666655      79999999999999999999999999998876      79999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|++||+|+++|+++++.|+ + ||+||+|+||+++|++............... .. ....+|||+|+.+++|+++
T Consensus       149 ~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~-~~~~~pedvA~~v~~l~s~  224 (264)
T 3tfo_A          149 TAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMDT-YR-AIALQPADIARAVRQVIEA  224 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-------------------------CCCHHHHHHHHHHHHHS
T ss_pred             CChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHHh-hh-ccCCCHHHHHHHHHHHhcC
Confidence            99999999999999999999998 4 9999999999999998765433211111111 11 3357999999999999974


Q ss_pred             --CCcccceEEecCCccc
Q psy12833        238 --PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~~  253 (254)
                        .+.+|+.+..++|..+
T Consensus       225 ~~~~~~~~i~i~p~~~~~  242 (264)
T 3tfo_A          225 PQSVDTTEITIRPTASGN  242 (264)
T ss_dssp             CTTEEEEEEEEEECC---
T ss_pred             CccCccceEEEecCcccc
Confidence              5789999998988754

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=7.1e-47  Score=307.99  Aligned_cols=231  Identities=29%  Similarity=0.489  Sum_probs=198.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++        .+.++++|++|+++++++++++.+.++++|+
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------GFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------cceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56899999999999999999999999999999999876543        2788999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus        91 lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~~~~~~~~~~~  158 (253)
T 2nm0_A           91 LIANAGVTKDQLLMR------MSEEDFTSVVETNLTGTFRVVKRANRAMLRAK------KGRVVLISSVVGLLGSAGQAN  158 (253)
T ss_dssp             EEEECSCCTTTC---------CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT------CEEEEEECCCCCCCCHHHHHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCEEEEECchhhCCCCCCcHH
Confidence            999999875544444      68889999999999999999999999998765      689999999999888888889


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~  239 (254)
                      |+++|+++++|+++++.|++++||+||+++||+++|++.....++..+.+....|. ++..+|+|+|+.+++++++  .+
T Consensus       159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~i~~l~s~~~~~  237 (253)
T 2nm0_A          159 YAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPL-GRYARPEEIAATVRFLASDDASY  237 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999998765433333444455666 8899999999999999974  68


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      ++|++|.+|||+++
T Consensus       238 ~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          238 ITGAVIPVDGGLGM  251 (253)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCcEEEECCcccc
Confidence            99999999999875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.9e-47  Score=307.47  Aligned_cols=239  Identities=29%  Similarity=0.479  Sum_probs=175.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999999998888877765   667899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.......   ....+.+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..++   ++
T Consensus        87 id~li~~Ag~~~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~---~~  154 (253)
T 3qiv_A           87 IDYLVNNAAIFGGMKL---DFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG------GGAIVNQSSTAAW---LY  154 (253)
T ss_dssp             CCEEEECCCCCCGGGG---GCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------CEEEEEECC---------
T ss_pred             CCEEEECCCcCCCCCC---cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC------CCEEEEECCcccc---CC
Confidence            9999999998432221   1122379999999999999999999999999999876      7899999999887   34


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      ...|+++|+++++|+++++.|++++||+|++++||+++|++.+... ++..+.+.+..|. ++..+|+|+|+.++++++ 
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~  233 (253)
T 3qiv_A          155 SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPL-SRMGTPDDLVGMCLFLLSD  233 (253)
T ss_dssp             -----CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CCHHHHHHHHHHSG
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcCc
Confidence            5679999999999999999999999999999999999999876543 3334445556666 889999999999999996 


Q ss_pred             -CCCcccceEEecCCccc
Q psy12833        237 -NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 -~~~~~G~~i~~~gG~~~  253 (254)
                       ..+++|++|.+|||+++
T Consensus       234 ~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          234 EASWITGQIFNVDGGQII  251 (253)
T ss_dssp             GGTTCCSCEEEC------
T ss_pred             cccCCCCCEEEECCCeec
Confidence             47899999999999875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=6.9e-46  Score=306.61  Aligned_cols=241  Identities=17%  Similarity=0.212  Sum_probs=210.3

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCC--chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPT--SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|++|||||+  +|||++++++|+++|++|++++|+.  +.++++.++. .++.+++||++|+++++++++++.+.++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF-NPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG-CCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc-CCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            679999999998  7899999999999999999999987  4444444444 4589999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTV-HSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      ++|++|||||......+.  ....+ .+.++|++.+++|+.++++++++++|.|.++       .++||++||..+..+.
T Consensus       103 ~id~li~nAg~~~~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-------~g~iv~isS~~~~~~~  173 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLE--GNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-------NASMVALTYIGAEKAM  173 (280)
T ss_dssp             SCCEEEECCCCCCGGGSS--SCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-------TCEEEEEECGGGTSCC
T ss_pred             CCCEEEECCccCCCcccC--CccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------CCeEEEEeccccccCC
Confidence            999999999986542111  11112 5889999999999999999999999999765       4899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ++...|+++|+|+++|+++++.|++++||+|++++||+++|++.....  ++..+......|. ++..+|||+|+.+++|
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~~~~~pedvA~~v~~l  252 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL-KKNVDIMEVGNTVAFL  252 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT-CSCCCHHHHHHHHHHT
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999987653  4455666667777 9999999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .+++|++|.+|||+++
T Consensus       253 ~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          253 CSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             TSGGGTTCCSCEEEESTTGGG
T ss_pred             hCcccCCcCCcEEEECCCccc
Confidence            974  7899999999999986

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=5.2e-46  Score=307.80  Aligned_cols=237  Identities=30%  Similarity=0.420  Sum_probs=205.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+. .++..++   .+.++.++++|++|+++++++++++.+.++
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999998754 3443333   366789999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++++.|.|.  .      .++||++||..+..+.+
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~------~g~iv~isS~~~~~~~~  172 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKD------VTPEEFDRVFTINTRGQFFVAREAYKHLE--I------GGRLILMGSITGQAKAV  172 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T------TCEEEEECCGGGTCSSC
T ss_pred             CCCEEEECCCcCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c------CCeEEEEechhhccCCC
Confidence            9999999999876555555      78999999999999999999999999982  2      58999999999988766


Q ss_pred             C-CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-----------hHHHHHHHHh--cCCCCCCCCC
Q psy12833        158 G-QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLAR--SIPAPQRLGH  223 (254)
Q Consensus       158 ~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~  223 (254)
                      + ...|+++|+++++|+++++.|++++||+||+|+||+++|++....           .++..+.+..  ..|. +++.+
T Consensus       173 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~  251 (283)
T 1g0o_A          173 PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-RRVGL  251 (283)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT-CSCBC
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC-CCCcC
Confidence            4 889999999999999999999999999999999999999986432           1233344444  5676 89999


Q ss_pred             HHHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        224 PDEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       224 ~~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+|+|+.++||+++  .+++|++|.+|||+++
T Consensus       252 p~dvA~~v~~l~s~~~~~itG~~i~vdgG~~~  283 (283)
T 1g0o_A          252 PIDIARVVCFLASNDGGWVTGKVIGIDGGACM  283 (283)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHHhCccccCcCCCEEEeCCCccC
Confidence            99999999999973  6899999999999874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-46  Score=306.13  Aligned_cols=237  Identities=32%  Similarity=0.479  Sum_probs=207.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++. ++.+++||++|+++++++++++.+.++++|+
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999999888877776663 4789999999999999999999999999999


Q ss_pred             EEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||||.... .++.+      .+.++|++.+++|+.++++++++++|.|.++       .++||++||..+..+.++..
T Consensus        86 lv~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~  152 (270)
T 1yde_A           86 VVNNAGHHPPPQRPEE------TSAQGFRQLLELNLLGTYTLTKLALPYLRKS-------QGNVINISSLVGAIGQAQAV  152 (270)
T ss_dssp             EEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCHHHHHCCTTCH
T ss_pred             EEECCCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-------CCEEEEEcCccccCCCCCCc
Confidence            9999997643 33444      7899999999999999999999999999765       48999999999999988899


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch------HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .|+++|+++++|+++++.|++++||+||+|+||+++|++.....      ...........|. +++.+|+|+|+.++||
T Consensus       153 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L  231 (270)
T 1yde_A          153 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL-GRMGQPAEVGAAAVFL  231 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT-SSCBCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999864321      1111112234666 8999999999999999


Q ss_pred             hc-CCCcccceEEecCCccc
Q psy12833        235 IT-NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~-~~~~~G~~i~~~gG~~~  253 (254)
                      ++ +.+++||+|.+|||+++
T Consensus       232 ~s~~~~itG~~i~vdGG~~~  251 (270)
T 1yde_A          232 ASEANFCTGIELLVTGGAEL  251 (270)
T ss_dssp             HHHCTTCCSCEEEESTTTTS
T ss_pred             cccCCCcCCCEEEECCCeec
Confidence            97 47999999999999865

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=5.5e-46  Score=300.42  Aligned_cols=232  Identities=26%  Similarity=0.448  Sum_probs=204.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +|++|||||++|||++++++|+++|++|++++|+.++   ..++++  +.++++|++| ++++++++++.+.++++|++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHT--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhhC--cEEEecCCch-HHHHHHHHHHHHHcCCCCEEE
Confidence            6899999999999999999999999999999998765   334443  7889999999 999999999999999999999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--CCCcc
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--SGQVA  161 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--~~~~~  161 (254)
                      ||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.  ++...
T Consensus        76 ~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~~~  143 (239)
T 2ekp_A           76 HAAAVNVRKPALE------LSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG------WGRVLFIGSVTTFTAGGPVPIPA  143 (239)
T ss_dssp             ECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCTTSCCHH
T ss_pred             ECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEECchhhccCCCCCCCcc
Confidence            9999865544444      78999999999999999999999999998875      6899999999998887  88899


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      |+++|+++++|+++++.|++++||++++++||+++|++.....  ++..+.+....|. +++.+|+|+|+.+++|+++  
T Consensus       144 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~~  222 (239)
T 2ekp_A          144 YTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM-GRWARPEEIARVAAVLCGDEA  222 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchh
Confidence            9999999999999999999999999999999999999875432  3333445555676 8899999999999999974  


Q ss_pred             CCcccceEEecCCcccC
Q psy12833        238 PLINGEVIRIDGALRMI  254 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~~  254 (254)
                      .+++|+.+.+|||++++
T Consensus       223 ~~~tG~~~~vdgG~~~~  239 (239)
T 2ekp_A          223 EYLTGQAVAVDGGFLAY  239 (239)
T ss_dssp             TTCCSCEEEESTTTTTC
T ss_pred             cCCCCCEEEECCCcccC
Confidence            68999999999999864

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=3.3e-46  Score=303.64  Aligned_cols=232  Identities=27%  Similarity=0.378  Sum_probs=189.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.     ++.  .+.++++|++|+++++++++++.+.++++|+
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQY--PFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCC--SSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcC--CceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            679999999999999999999999999999999998653     111  2788999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus        78 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~------~g~iv~isS~~~~~~~~~~~~  145 (250)
T 2fwm_X           78 LVNAAGILRMGATDQ------LSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR------GGAIVTVASDAAHTPRIGMSA  145 (250)
T ss_dssp             EEECCCCCCCCCTTT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCGGGTSCCTTCHH
T ss_pred             EEECCCcCCCCCccc------CCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC------CCEEEEECchhhCCCCCCCch
Confidence            999999865544444      78999999999999999999999999998875      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHH-HHHh-------cCCCCCCCCCHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRN-FLAR-------SIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~-~~~~-------~~~~~~~~~~~~~va~~~  231 (254)
                      |+++|+++++|+++++.|++++||+||+++||+++|++.....  ++..+ .+..       ..|. ++..+|+|+|+.+
T Consensus       146 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v  224 (250)
T 2fwm_X          146 YGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPL-GKIARPQEIANTI  224 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCC-CCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999999865421  11112 2222       3455 7889999999999


Q ss_pred             HHHhcC--CCcccceEEecCCccc
Q psy12833        232 QSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       232 ~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++|+++  .+++|++|.+|||+++
T Consensus       225 ~~l~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          225 LFLASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHhCccccCCCCCEEEECCCccc
Confidence            999974  6899999999999875

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=4.7e-46  Score=305.39  Aligned_cols=241  Identities=18%  Similarity=0.248  Sum_probs=208.5

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH---HHhCC-CceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGP-DVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++||++|||||+  +|||++++++|+++|++|++++|+....+...   ++.+. ++.+++||++|+++++++++++.+.
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            579999999999  66999999999999999999999865433333   23333 7999999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++|||||.......  .....+.+.++++..+++|+.+++.+++.++|.|.+        .++||++||..+..+
T Consensus        85 ~g~id~li~~Ag~~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~g~iv~isS~~~~~~  154 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEEL--VGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--------GGSIVTLTYLGGELV  154 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGG--SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--------CEEEEEEECGGGTSC
T ss_pred             hCCeeEEEEcccccccccc--ccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--------CceEEEEeccccccc
Confidence            9999999999998652111  112223799999999999999999999999998864        589999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .++...|++||+|+++|+++++.|++++||+|++++||+++|++.....  ++..+.+....|. ++..+|+|+|+.+++
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~~  233 (266)
T 3oig_A          155 MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL-RRTTTPEEVGDTAAF  233 (266)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT-SSCCCHHHHHHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC-CCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999876643  3445566667777 899999999999999


Q ss_pred             Hhc--CCCcccceEEecCCccc
Q psy12833        234 IIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |++  +.+++|++|.+|||+++
T Consensus       234 l~s~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          234 LFSDMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HcCCchhcCcCCEEEECCCeEE
Confidence            997  47899999999999975

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.1e-46  Score=308.03  Aligned_cols=236  Identities=19%  Similarity=0.271  Sum_probs=204.9

Q ss_pred             CCCcEEEEeCC--CChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC-
Q psy12833          2 LKGVVGLVTGG--ASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG-   77 (254)
Q Consensus         2 l~~~~~lItGa--s~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-   77 (254)
                      |++|++|||||  ++|||++++++|+++|++|++++|+.++ ++++.++++.++.++++|++|+++++++++++.+.++ 
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            56899999999  9999999999999999999999998866 4666666677889999999999999999999999999 


Q ss_pred             --CCcEEEeCCccCCC-----ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         78 --KLDVNVNCAGISCA-----FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        78 --~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                        ++|++|||||....     .++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||.
T Consensus        85 ~~~iD~lv~nAg~~~~~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~g~iv~iss~  150 (269)
T 2h7i_A           85 GNKLDGVVHSIGFMPQTGMGINPFFD------APYADVSKGIHISAYSYASMAKALLPIMNP--------GGSIVGMDFD  150 (269)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECC
T ss_pred             CCCceEEEECCccCcccccccccccc------CCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--------CCeEEEEcCc
Confidence              99999999998652     33333      789999999999999999999999999854        3799999998


Q ss_pred             ccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-----hHH-------HHHHHHhcCCCC
Q psy12833        151 AAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-----NEK-------VRNFLARSIPAP  218 (254)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-----~~~-------~~~~~~~~~~~~  218 (254)
                      .+ .+.+.+..|+++|+++++|+++++.|++++||+||+|+||+++|++....     .++       ..+.+....|. 
T Consensus       151 ~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-  228 (269)
T 2h7i_A          151 PS-RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI-  228 (269)
T ss_dssp             CS-SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT-
T ss_pred             cc-cccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc-
Confidence            76 66778889999999999999999999999999999999999999976432     111       12334455676 


Q ss_pred             C-CCCCHHHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        219 Q-RLGHPDEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       219 ~-~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      + ++.+|||+|+.++||+++  .++||++|.+|||+++
T Consensus       229 ~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          229 GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence            7 699999999999999974  6999999999999875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.3e-46  Score=305.32  Aligned_cols=234  Identities=35%  Similarity=0.496  Sum_probs=208.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..+++..++.++++|++|+++++++++++.+.++++|+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            67899999999999999999999999999999999988888777777666889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++...
T Consensus        85 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  152 (260)
T 1nff_A           85 LVNNAGILNIGTIED------YALTEWQRILDVNLTGVFLGIRAVVKPMKEAG------RGSIINISSIEGLAGTVACHG  152 (260)
T ss_dssp             EEECCCCCCCBCTTT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CCEEEEEeehhhcCCCCCchh
Confidence            999999875544444      78999999999999999999999999998865      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~  239 (254)
                      |+++|+++++|+++++.|++++||++++++||+++|++.. ..++   .+. ..|. ++..+|+|+|+.+++++++  .+
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~---~~~-~~~~-~~~~~~~dvA~~v~~l~s~~~~~  226 (260)
T 1nff_A          153 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVPE---DIF-QTAL-GRAAEPVEVSNLVVYLASDESSY  226 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSCT---TCS-CCSS-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cchh---hHH-hCcc-CCCCCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999999864 1111   111 3455 7889999999999999974  68


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      ++|+++.+|||+++
T Consensus       227 ~~G~~~~v~gG~~~  240 (260)
T 1nff_A          227 STGAEFVVDGGTVA  240 (260)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCEEEECCCeec
Confidence            99999999999875

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=8.9e-46  Score=303.93  Aligned_cols=236  Identities=28%  Similarity=0.404  Sum_probs=209.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +.+|++|||||++|||++++++|+++|++|+++ .|+.+..++..+++   +.++.++++|++|+++++++++++.+.++
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999999764 56666666665554   67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hccCCCCCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIH-ENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++.+++.|. ++.      .++||++||..+..+.
T Consensus       104 ~id~li~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  171 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPA------LSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ------GGRIITLSSVSGVMGN  171 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEEEEECCHHHHHCC
T ss_pred             CccEEEECCCCCCCCcccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CcEEEEEcchHhccCC
Confidence            9999999999877666555      79999999999999999999999998886 333      6899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|+++|+|+++|+++++.|++++||+|++++||+++|++.... ++..+......|. ++..+|||+|+.+++|++
T Consensus       172 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~p~-~~~~~~edva~~~~~L~s  249 (267)
T 4iiu_A          172 RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-ESALKEAMSMIPM-KRMGQAEEVAGLASYLMS  249 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-HHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHS
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999998765 3344555566777 899999999999999997


Q ss_pred             C--CCcccceEEecCCc
Q psy12833        237 N--PLINGEVIRIDGAL  251 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~  251 (254)
                      +  .+++||+|.+|||+
T Consensus       250 ~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          250 DIAGYVTRQVISINGGM  266 (267)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             CcccCccCCEEEeCCCc
Confidence            4  78999999999996

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.1e-45  Score=302.74  Aligned_cols=230  Identities=29%  Similarity=0.458  Sum_probs=204.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.        +.++.++++|++|+++++++++++.+.++++|+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999998765        357889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus        78 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  145 (264)
T 2dtx_A           78 LVNNAGIESYGKIES------MSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR------DPSIVNISSVQASIITKNASA  145 (264)
T ss_dssp             EEECCCCCCCBCTTT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS------SCEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC------CcEEEEECCchhccCCCCchh
Confidence            999999876554444      78999999999999999999999999998765      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-------H----HHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-------E----KVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      |+++|+++++|+++++.|+++. |+||+|+||+++|++.....       +    +..+.+....|. +++.+|+|+|+.
T Consensus       146 Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~  223 (264)
T 2dtx_A          146 YVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM-QRIGKPQEVASA  223 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTT-SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            9999999999999999999988 99999999999999865431       1    223334445676 889999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++++++  .+++|++|.+|||+++
T Consensus       224 v~~l~s~~~~~~tG~~i~vdGG~~~  248 (264)
T 2dtx_A          224 VAFLASREASFITGTCLYVDGGLSI  248 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCCCCcEEEECCCccc
Confidence            9999974  6899999999999875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=8.4e-46  Score=307.29  Aligned_cols=249  Identities=24%  Similarity=0.339  Sum_probs=206.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh----CCCceEEecCCCC----HHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL----GPDVKFAPVDVTS----EEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~----~~~~~~~~~Dls~----~~~~~~~~~~~   72 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+. +.+++..+++    +.++.++++|++|    +++++++++++
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998 7776665544    5678999999999    99999999999


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCc-----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEE
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTV-----HSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINT  147 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~v  147 (254)
                      .+.++++|++|||||.....++.+. ...+     .+.++|++.+++|+.+++++++.++|.|.++........++||++
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  179 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAFYPTPLVQG-DHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL  179 (288)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCCC---------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred             HHhcCCCCEEEECCCCCCCCccccc-cchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence            9999999999999998654433110 0012     578899999999999999999999999976532112224899999


Q ss_pred             eccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCC-CCHHH
Q psy12833        148 ASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL-GHPDE  226 (254)
Q Consensus       148 ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  226 (254)
                      ||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++ ... ++..+.+....|. ++. .+|+|
T Consensus       180 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~-~~~~~~~~~~~p~-~r~~~~ped  256 (288)
T 2x9g_A          180 CDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMG-EEEKDKWRRKVPL-GRREASAEQ  256 (288)
T ss_dssp             CCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSC-HHHHHHHHHTCTT-TSSCCCHHH
T ss_pred             ecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccC-hHHHHHHHhhCCC-CCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999998 422 2223444455676 888 89999


Q ss_pred             HHHHHHHHhcC--CCcccceEEecCCcccC
Q psy12833        227 FAQLVQSIITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       227 va~~~~~l~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      +|+.+++|+++  .+++|++|.+|||+++.
T Consensus       257 vA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          257 IADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            99999999974  79999999999998763

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-46  Score=311.18  Aligned_cols=236  Identities=26%  Similarity=0.339  Sum_probs=198.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC------------CchhHHHHHH---hCCCceEEecCCCCHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP------------TSEGESVAKE---LGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~   66 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+            .+.+++...+   .+.++.+++||++|+++++
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            679999999999999999999999999999999997            3344444333   3678999999999999999


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEE
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIIN  146 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~  146 (254)
                      ++++++.+.++++|++|||||.....  ..      .+.++|++.+++|+.++++++++++|.|.+        .++||+
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~--~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~g~iv~  151 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLG--AH------LPVQAFADAFDVDFVGVINTVHAALPYLTS--------GASIIT  151 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCC--TT------CCTHHHHHHHHHHTHHHHHHHHHHGGGCCT--------TCEEEE
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCccc--Cc------CCHHHHHHHhhhhhhhhHHHHHHHHHHhhc--------CcEEEE
Confidence            99999999999999999999986433  12      578999999999999999999999999832        589999


Q ss_pred             EeccccccCC-----------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH----------
Q psy12833        147 TASIAAYEGQ-----------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE----------  205 (254)
Q Consensus       147 vss~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~----------  205 (254)
                      +||..+..+.           ++...|+++|+++++|+++++.|++++||+||+|+||+++|++......          
T Consensus       152 isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  231 (287)
T 3pxx_A          152 TGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEA  231 (287)
T ss_dssp             ECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSS
T ss_pred             eccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhcccccc
Confidence            9999887655           5677899999999999999999999999999999999999998754211          


Q ss_pred             -HH---HHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        206 -KV---RNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       206 -~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                       ..   ..........++++.+|||+|++++||++  +.++||++|.+|||+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          232 PSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             CCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             chhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence             00   11111112233788999999999999997  47999999999999976

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=8.8e-46  Score=301.44  Aligned_cols=230  Identities=21%  Similarity=0.240  Sum_probs=188.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+. ++
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~   83 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-AP   83 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CC
Confidence            57899999999999999999999999999999999999988887766   667899999999999999999999999 99


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+.++
T Consensus        84 id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  151 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILE------TTDRVFRKVWEMACWAGFVSGRESARLMLAHG------QGKIFFTGATASLRGGSG  151 (252)
T ss_dssp             EEEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEEEEGGGTCCCTT
T ss_pred             ceEEEECCCcCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEECCHHHcCCCCC
Confidence            999999999877666655      79999999999999999999999999999876      689999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEE-EEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRV-NTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v-~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      ...|++||+|+++|+++++.|++++||+| |+++||+++|++.+...++..+......|. + ..+|||+|+.+++|+++
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~-~~~pedvA~~~~~l~s~  229 (252)
T 3h7a_A          152 FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPD-L-LMPPAAVAGAYWQLYQQ  229 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CCHHHHHHHHHHHHHC
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCc-c-CCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999 999999999999876655544444445555 5 89999999999999974


Q ss_pred             --CCcccceEE
Q psy12833        238 --PLINGEVIR  246 (254)
Q Consensus       238 --~~~~G~~i~  246 (254)
                        ...+|++..
T Consensus       230 ~~~~~~~~i~~  240 (252)
T 3h7a_A          230 PKSAWTFEMEI  240 (252)
T ss_dssp             CGGGBCSEEEE
T ss_pred             chhcceeeEEe
Confidence              466777654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.8e-47  Score=314.29  Aligned_cols=234  Identities=22%  Similarity=0.317  Sum_probs=205.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC---EEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG---RVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      |+||++|||||++|||++++++|+++|+   +|++++|+.+.++++.+++     +.++.+++||++|+++++++++++.
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999998   9999999998888877765     4578899999999999999999999


Q ss_pred             HHcCCCcEEEeCCccCC-CccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         74 DSFGKLDVNVNCAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      +.++++|++|||||... ..++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~IV~isS~~~  178 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQ------IATEDIQDVFDTNVTALINITQAVLPIFQAKN------SGDIVNLGSIAG  178 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTS------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCGGG
T ss_pred             HhcCCCCEEEECCCcCCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCeEEEECChhh
Confidence            99999999999999764 333333      79999999999999999999999999998876      799999999999


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hHHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      ..+.++...|+++|+|+++|+++++.|++++||+||+|+||+++|++....    .+...+....     ....+|||+|
T Consensus       179 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~p~~pedvA  253 (287)
T 3rku_A          179 RDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD-----TTPLMADDVA  253 (287)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT-----SCCEEHHHHH
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc-----cCCCCHHHHH
Confidence            999999999999999999999999999999999999999999999985321    1222222222     2334899999


Q ss_pred             HHHHHHhcC--CCcccceEEecCCcc
Q psy12833        229 QLVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       229 ~~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      +.++||+++  .+++|+++.+|||..
T Consensus       254 ~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          254 DLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHHHhCCCCCeEecceEEeeCCCC
Confidence            999999974  689999999999975

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.1e-46  Score=309.35  Aligned_cols=231  Identities=23%  Similarity=0.309  Sum_probs=204.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-------hHHHHHHh---CCCceEEecCCCCHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-------GESVAKEL---GPDVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.++       +++..+++   +.++.+++||++|++++++++++
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            679999999999999999999999999999999998773       34444333   67899999999999999999999


Q ss_pred             HHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         72 CKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      +.+.++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..
T Consensus        87 ~~~~~g~id~lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~  154 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASAINLGSIEE------VPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD------NPHILTLSPPI  154 (285)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTT------SCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS------SCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEECChh
Confidence            9999999999999999876555555      89999999999999999999999999998776      68999999999


Q ss_pred             cccCC-CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecC-CccccccccchHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy12833        152 AYEGQ-SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       152 ~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg-~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  229 (254)
                      +..+. ++...|++||+|+++|+++++.|++++||+||+|+|| .++|++...       ......+. ++..+|||+|+
T Consensus       155 ~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~-------~~~~~~~~-~r~~~pedvA~  226 (285)
T 3sc4_A          155 RLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN-------LLGGDEAM-ARSRKPEVYAD  226 (285)
T ss_dssp             CCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH-------HHTSCCCC-TTCBCTHHHHH
T ss_pred             hccCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh-------hccccccc-cCCCCHHHHHH
Confidence            98875 7789999999999999999999999999999999999 689977532       22233455 88999999999


Q ss_pred             HHHHHhcC-CCcccceEEecCCcc
Q psy12833        230 LVQSIITN-PLINGEVIRIDGALR  252 (254)
Q Consensus       230 ~~~~l~~~-~~~~G~~i~~~gG~~  252 (254)
                      .+++|+++ .+++|+++.+|||+.
T Consensus       227 ~~~~l~s~~~~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          227 AAYVVLNKPSSYTGNTLLCEDVLL  250 (285)
T ss_dssp             HHHHHHTSCTTCCSCEEEHHHHHH
T ss_pred             HHHHHhCCcccccceEEEEcCchh
Confidence            99999974 389999999999864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.9e-46  Score=300.74  Aligned_cols=233  Identities=26%  Similarity=0.412  Sum_probs=202.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.++++++. ++. ++.++++|++|+++++    ++.+.++++|+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~----~~~~~~~~id~   77 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYP-GIQTRVLDVTKKKQID----QFANEVERLDV   77 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GST-TEEEEECCTTCHHHHH----HHHHHCSCCSE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hcc-CceEEEeeCCCHHHHH----HHHHHhCCCCE
Confidence            67999999999999999999999999999999999987766654 432 6889999999999888    44456789999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC-CCc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-GQV  160 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~-~~~  160 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.+ +..
T Consensus        78 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  145 (246)
T 2ag5_A           78 LFNVAGFVHHGTVLD------CEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK------SGNIINMSSVASSVKGVVNRC  145 (246)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCSBTTTBCCTTBH
T ss_pred             EEECCccCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CceEEEEechHhCcCCCCCCc
Confidence            999999876655555      78999999999999999999999999998775      68999999999988877 888


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .|+++|+++++++++++.|++++||++++++||+++|++....      .++..+.+....|. ++..+|+|+|+.+++|
T Consensus       146 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v~~l  224 (246)
T 2ag5_A          146 VYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYL  224 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT-SSCEEHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999986541      12333444455666 8899999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .+++|++|.+|||+++
T Consensus       225 ~s~~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          225 ASDESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             HSGGGTTCCSCEEEECTTGGG
T ss_pred             hCccccCCCCCEEEECCCccC
Confidence            974  6899999999999875

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.8e-46  Score=305.93  Aligned_cols=238  Identities=26%  Similarity=0.407  Sum_probs=200.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..+++      +.++.++++|++|+++++++++++.+.
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999988887776665      346789999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVH----SLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      ++++|++|||||.....++.+      .    +.++|++.+++|+.+++++++.++|.|.++       .++||++||..
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-------~g~iv~isS~~  150 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSK------TGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-------KGEIVNISSIA  150 (278)
T ss_dssp             HSCCCEEEECCC-------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCccccc------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-------CCeEEEEeccc
Confidence            999999999999865544433      4    889999999999999999999999999765       38999999999


Q ss_pred             c-ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---HHH------HHHHHhcCCCCCCC
Q psy12833        152 A-YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---EKV------RNFLARSIPAPQRL  221 (254)
Q Consensus       152 ~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~------~~~~~~~~~~~~~~  221 (254)
                      + ..+.++...|+++|+++++|+++++.|++++||++++|+||+++|++.....   +..      .+.+....|. +++
T Consensus       151 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~  229 (278)
T 1spx_A          151 SGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVM  229 (278)
T ss_dssp             SSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-SSC
T ss_pred             ccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC-cCC
Confidence            8 8888889999999999999999999999999999999999999999864321   111      2333445666 889


Q ss_pred             CCHHHHHHHHHHHhcC--CC-cccceEEecCCccc
Q psy12833        222 GHPDEFAQLVQSIITN--PL-INGEVIRIDGALRM  253 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~--~~-~~G~~i~~~gG~~~  253 (254)
                      .+|+|+|+.+++|+++  .+ ++|++|.+|||+++
T Consensus       230 ~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~  264 (278)
T 1spx_A          230 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  264 (278)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHcCccccCcccCcEEEECCCccc
Confidence            9999999999999974  44 99999999999864

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-46  Score=304.08  Aligned_cols=240  Identities=16%  Similarity=0.207  Sum_probs=203.7

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH---HHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++|++|||||+  +|||++++++|+++|++|++++|+....+.+.   ++ ..++.+++||++|+++++++++++.+.+
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE-FGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH-cCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999998  99999999999999999999999854333222   22 3458999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTV-HSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||||......+.  ....+ .+.++|++.+++|+.+++++++.++|.|.+        .++||++||..+..+
T Consensus        91 g~id~lv~nAg~~~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~g~iv~isS~~~~~~  160 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIA--GDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--------DASLLTLSYLGAERA  160 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGS--SCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--------EEEEEEEECGGGTSB
T ss_pred             CCCCEEEECCccCcccccc--CccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--------CceEEEEeccccccC
Confidence            9999999999986542211  11222 689999999999999999999999998864        489999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .++...|+++|+|+++|+++++.|++++||+|++++||+++|++.....  ++..+.+....|. ++..+|||+|+.+++
T Consensus       161 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~pedva~~i~~  239 (271)
T 3ek2_A          161 IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL-KRNVTIEQVGNAGAF  239 (271)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT-SSCCCHHHHHHHHHH
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc-CCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987653  3455566667787 999999999999999


Q ss_pred             HhcC--CCcccceEEecCCccc
Q psy12833        234 IITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+++  .+++|++|.+|||+++
T Consensus       240 l~s~~~~~~tG~~i~vdgG~~~  261 (271)
T 3ek2_A          240 LLSDLASGVTAEVMHVDSGFNA  261 (271)
T ss_dssp             HHSGGGTTCCSEEEEESTTGGG
T ss_pred             HcCcccCCeeeeEEEECCCeee
Confidence            9974  7899999999999986

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=8.3e-46  Score=304.91  Aligned_cols=241  Identities=31%  Similarity=0.451  Sum_probs=198.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            5678999999999999999999999999999876 67777666665554   5678999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||||.... .++.+      .+.++|++.+++|+.+++++++.++|.|.+...   ...++||++||..+..+
T Consensus       103 g~id~li~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~  173 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDE------MSVERIERMLRVNVTGSILCAAEAVRRMSRLYS---GQGGAIVNVSSMAAILG  173 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGT---CCCEEEEEECCTHHHHC
T ss_pred             CCCCEEEECCCCCCCCCChhh------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcc---CCCCEEEEEcchHhccC
Confidence            999999999998654 44444      799999999999999999999999999987421   11589999999999887


Q ss_pred             CC-CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QS-GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .+ ++..|++||+|+++|+++++.|++++||+|++++||+++|++.... .++.........|. ++..+|||+|+.+++
T Consensus       174 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~edvA~~i~~  252 (272)
T 4e3z_A          174 SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPM-QRAGMPEEVADAILY  252 (272)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTT-SSCBCHHHHHHHHHH
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCc-CCCcCHHHHHHHHHH
Confidence            66 6678999999999999999999999999999999999999987542 23333444455666 889999999999999


Q ss_pred             Hhc--CCCcccceEEecCCc
Q psy12833        234 IIT--NPLINGEVIRIDGAL  251 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~  251 (254)
                      +++  +.+++|++|++|||+
T Consensus       253 l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          253 LLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCCccccccCCEEeecCCC
Confidence            996  478999999999995

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.8e-46  Score=303.25  Aligned_cols=229  Identities=22%  Similarity=0.405  Sum_probs=198.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----C-CCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----G-PDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~-~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     + .++.+++||++|+++++++++++.+.
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999998888777665     3 67899999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++|||||.....++ +      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+..+
T Consensus        85 ~g~iD~lvnnAg~~~~~~~-~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~  151 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSL-S------EPVDNFRKIMEINVIAQYGILKTVTEIMKVQK------NGYIFNVASRAAKYG  151 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCC-S------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECC------
T ss_pred             cCCCCEEEECCCcCCCCCC-C------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CeEEEEEccHHhcCC
Confidence            9999999999998755544 3      68899999999999999999999999998876      799999999999997


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      .++...|+++|+|+++|+++++.|++++||+||+++||+++|++.+...        ...+. +++.+|||+|+.++||+
T Consensus       152 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--------~~~~~-~~~~~p~dva~~v~~l~  222 (250)
T 3nyw_A          152 FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG--------TPFKD-EEMIQPDDLLNTIRCLL  222 (250)
T ss_dssp             -CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT--------CCSCG-GGSBCHHHHHHHHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC--------CCccc-ccCCCHHHHHHHHHHHH
Confidence            7778999999999999999999999999999999999999998764321        23444 78899999999999999


Q ss_pred             cC---CCcccceEEecCCcc
Q psy12833        236 TN---PLINGEVIRIDGALR  252 (254)
Q Consensus       236 ~~---~~~~G~~i~~~gG~~  252 (254)
                      ++   ..+++..|.+|||..
T Consensus       223 s~~~~~~~~~~~i~vd~~~~  242 (250)
T 3nyw_A          223 NLSENVCIKDIVFEMKKSII  242 (250)
T ss_dssp             TSCTTEECCEEEEEEHHHHH
T ss_pred             cCCCceEeeEEEEEeecccc
Confidence            74   367899999999863

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.2e-45  Score=302.11  Aligned_cols=236  Identities=25%  Similarity=0.314  Sum_probs=204.9

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCc---hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTS---EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.++.+ .+.++++|++|+++++++++++.+.+
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            678999999999  99999999999999999999999875   2333333333 47899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC----ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         77 GKLDVNVNCAGISCA----FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        77 ~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      +++|++|||||....    .++.+      .+.++|++.+++|+.+++++++++.|.|.+        .++||++||..+
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~g~iv~isS~~~  150 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYID------TRRQDWLLALEVSAYSLVAVARRAEPLLRE--------GGGIVTLTYYAS  150 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--------EEEEEEEECGGG
T ss_pred             CCCCEEEECCCCCCcccCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--------CCEEEEEecccc
Confidence            999999999998643    33334      789999999999999999999999998853        489999999999


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      ..+.++...|+++|+++++|+++++.|++++||+||+++||+++|++.....  ++..+.+.+..|. +++.+|||+|+.
T Consensus       151 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dva~~  229 (261)
T 2wyu_A          151 EKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL-RRNITQEEVGNL  229 (261)
T ss_dssp             TSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT-SSCCCHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC-CCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999875432  3344445556777 889999999999


Q ss_pred             HHHHhc--CCCcccceEEecCCccc
Q psy12833        231 VQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++++++  +.+++|++|.+|||+++
T Consensus       230 v~~l~s~~~~~~tG~~~~vdgG~~~  254 (261)
T 2wyu_A          230 GLFLLSPLASGITGEVVYVDAGYHI  254 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHcChhhcCCCCCEEEECCCccc
Confidence            999997  46899999999999875

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.8e-45  Score=303.38  Aligned_cols=236  Identities=18%  Similarity=0.238  Sum_probs=205.5

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCc---hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTS---EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.++.+ ++.++++|++|+++++++++++.+.+
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            789999999999  99999999999999999999999876   2333333333 48899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC----ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         77 GKLDVNVNCAGISCA----FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        77 ~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      +++|++|||||....    .++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~g~iv~isS~~~  148 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLE------TSKSAFNTAMEISVYSLIELTNTLKPLLNN--------GASVLTLSYLGS  148 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECGGG
T ss_pred             CCCCEEEECCccCccccCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--------CCEEEEEecchh
Confidence            999999999998653    23334      789999999999999999999999998853        489999999999


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      ..+.++...|+++|+++++|+++++.|++++||+||+++||+++|++.....  ++..+.+....|. ++..+|+|+|+.
T Consensus       149 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dva~~  227 (275)
T 2pd4_A          149 TKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL-RKNVSLEEVGNA  227 (275)
T ss_dssp             TSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT-SSCCCHHHHHHH
T ss_pred             cCCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc-CCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999876532  3334445556677 889999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++++++  .+++|+++.+|||+++
T Consensus       228 ~~~l~s~~~~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          228 GMYLLSSLSSGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCccccCCCCCEEEECCCccc
Confidence            9999973  7899999999999864

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=4.8e-45  Score=296.55  Aligned_cols=238  Identities=32%  Similarity=0.505  Sum_probs=211.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++++|++|+++++++++++.+.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999988887776665    4568899999999999999999999999999


Q ss_pred             cEEEeCCccCCCcc---ccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         80 DVNVNCAGISCAFK---IFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        80 d~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      |++|||||.....+   +.+      .+.+++++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.
T Consensus        82 d~li~~Ag~~~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~  149 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHT------TPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG------AGVIVNIASVASLVAF  149 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCC
T ss_pred             CEEEECCCCCCCCCcchhhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC------CCEEEEECChhhccCC
Confidence            99999999865443   333      78999999999999999999999999998875      6899999999999998


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-c-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-L-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ++...|+++|++++.|+++++.|+.++||++++++||+++|++... . .+...+.+....|. +++.+|+|+|+.++++
T Consensus       150 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l  228 (250)
T 2cfc_A          150 PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ-KEIGTAAQVADAVMFL  228 (250)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT-CSCBCHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998754 2 12333444455666 8899999999999999


Q ss_pred             hcC--CCcccceEEecCCcccC
Q psy12833        235 ITN--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~~  254 (254)
                      +++  .+++|+++.+|||+++|
T Consensus       229 ~~~~~~~~~G~~~~v~gG~~~~  250 (250)
T 2cfc_A          229 AGEDATYVNGAALVMDGAYTAI  250 (250)
T ss_dssp             HSTTCTTCCSCEEEESTTGGGC
T ss_pred             cCchhhcccCCEEEECCceecC
Confidence            974  58999999999999876

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=4.9e-45  Score=302.22  Aligned_cols=237  Identities=19%  Similarity=0.262  Sum_probs=203.9

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCc---hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTS---EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||+  +|||++++++|+++|++|++++|+.+   .++++.++.+ ++.++++|++|+++++++++++.+.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            678999999999  99999999999999999999999875   2223323333 47899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC----ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         77 GKLDVNVNCAGISCA----FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        77 ~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      +++|++|||||....    .++.+      .+.++|++.+++|+.++++++++++|.|.++       .++||++||..+
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-------~g~iv~isS~~~  164 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVID------TSREGFKIAMDISVYSLIALTRELLPLMEGR-------NGAIVTLSYYGA  164 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-------CCEEEEEECGGG
T ss_pred             CCCCEEEECCCCCCcccCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-------CCEEEEEccchh
Confidence            999999999998643    23333      7899999999999999999999999998653       489999999999


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      ..+.++...|+++|+++++|+++++.|++++||+||+|+||+++|++.....  ++..+.+....|. ++..+|+|+|+.
T Consensus       165 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dva~~  243 (285)
T 2p91_A          165 EKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF-GKPITIEDVGDT  243 (285)
T ss_dssp             TSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT-SSCCCHHHHHHH
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999865432  3334445556676 889999999999


Q ss_pred             HHHHhc--CCCcccceEEecCCccc
Q psy12833        231 VQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++++++  +.+++|++|.+|||+++
T Consensus       244 ~~~l~s~~~~~~tG~~~~vdgg~~~  268 (285)
T 2p91_A          244 AVFLCSDWARAITGEVVHVDNGYHI  268 (285)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHcCCcccCCCCCEEEECCCccc
Confidence            999997  46899999999999865

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=5.7e-46  Score=306.16  Aligned_cols=228  Identities=23%  Similarity=0.358  Sum_probs=197.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-------hHHHHHHh---CCCceEEecCCCCHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-------GESVAKEL---GPDVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.       +++..+++   +.++.+++||++|++++++++++
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999998764       33433333   67899999999999999999999


Q ss_pred             HHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         72 CKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      +.+.++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..
T Consensus        84 ~~~~~g~iD~lvnnAG~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~  151 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAIWLRGTLD------TPMKRFDLMQQVNARGSFVCAQACLPHLLQAP------NPHILTLAPPP  151 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGG------SCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS------SCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCcccCCCccc------CCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC------CceEEEECChH
Confidence            9999999999999999876666555      79999999999999999999999999998876      78999999999


Q ss_pred             cccC--CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecC-CccccccccchHHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        152 AYEG--QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       152 ~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg-~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      +..+  .++...|++||+|+++|+++++.|++++||+||+|+|| .++|++....         ...+. .+..+|||+|
T Consensus       152 ~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~---------~~~~~-~~~~~pedvA  221 (274)
T 3e03_A          152 SLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML---------PGVDA-AACRRPEIMA  221 (274)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CCCG-GGSBCTHHHH
T ss_pred             hcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc---------ccccc-cccCCHHHHH
Confidence            9887  67788999999999999999999999999999999999 6899876321         11233 5678999999


Q ss_pred             HHHHHHhcC--CCcccceEEecCCcc
Q psy12833        229 QLVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       229 ~~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      +.++||+++  .++|||+| +|||.+
T Consensus       222 ~~v~~l~s~~~~~itG~~i-~~~g~~  246 (274)
T 3e03_A          222 DAAHAVLTREAAGFHGQFL-IDDEVL  246 (274)
T ss_dssp             HHHHHHHTSCCTTCCSCEE-EHHHHH
T ss_pred             HHHHHHhCccccccCCeEE-EcCcch
Confidence            999999974  79999999 877753

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=5.2e-46  Score=301.45  Aligned_cols=228  Identities=29%  Similarity=0.405  Sum_probs=199.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHH-cCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVR-EGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      .++|++|||||++|||++++++|++ .|++|++++|+.+..       ..++.++++|++|+++++++++.+.  ++++|
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id   72 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------AENLKFIKADLTKQQDITNVLDIIK--NVSFD   72 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------CTTEEEEECCTTCHHHHHHHHHHTT--TCCEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------cccceEEecCcCCHHHHHHHHHHHH--hCCCC
Confidence            5789999999999999999999999 789999999976521       1356899999999999999996554  67999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....++.+      .+.++|++.+++|+.+++++++++.|.|.+        .++||++||..+..+.++..
T Consensus        73 ~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~~~  138 (244)
T 4e4y_A           73 GIFLNAGILIKGSIFD------IDIESIKKVLDLNVWSSIYFIKGLENNLKV--------GASIVFNGSDQCFIAKPNSF  138 (244)
T ss_dssp             EEEECCCCCCCBCTTT------SCHHHHHHHHHHHTHHHHHHHHHTGGGEEE--------EEEEEEECCGGGTCCCTTBH
T ss_pred             EEEECCccCCCCCccc------CCHHHHHHHHHHccHHHHHHHHHHHHHhcc--------CcEEEEECCHHHccCCCCCc
Confidence            9999999876655555      899999999999999999999999998865        37999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH-----------HHHHHHhcCCCCCCCCCHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-----------VRNFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~va~  229 (254)
                      .|++||+|+++|+++++.|++++||+||+++||+++|++.+.....           ..+......|. ++..+|||+|+
T Consensus       139 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~  217 (244)
T 4e4y_A          139 AYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPL-NRIAQPQEIAE  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTT-SSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCC-CCCcCHHHHHH
Confidence            9999999999999999999999999999999999999987654322           33445566777 89999999999


Q ss_pred             HHHHHhc--CCCcccceEEecCCccc
Q psy12833        230 LVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       230 ~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .+++|++  +.+++|++|.+|||+++
T Consensus       218 ~v~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          218 LVIFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhcCccccccCCeEeECCCccC
Confidence            9999997  47899999999999985

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=5.7e-46  Score=312.87  Aligned_cols=241  Identities=29%  Similarity=0.391  Sum_probs=205.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC----------CchhHHHHHHh---CCCceEEecCCCCHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP----------TSEGESVAKEL---GPDVKFAPVDVTSEEDVQKA   68 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~----------~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~   68 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+          .+.+++..+++   +.++.+++||++|+++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            679999999999999999999999999999999997          56666666655   56788999999999999999


Q ss_pred             HHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEe
Q psy12833         69 VLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA  148 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vs  148 (254)
                      ++++.+.++++|++|||||.....++.+      .+.++|++.+++|+.+++++++++.+.|.+.........++||++|
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is  178 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVRDRMIAN------TSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS  178 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence            9999999999999999999877665555      7999999999999999999999999999865422222248999999


Q ss_pred             ccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        149 SIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       149 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      |..+..+.++...|++||+|+++|+++++.|++++||+||+|+|| ++|++......+...   ...+. .+..+|+|+|
T Consensus       179 S~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~---~~~~~-~~~~~pedva  253 (322)
T 3qlj_A          179 SGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA---TQDQD-FDAMAPENVS  253 (322)
T ss_dssp             CHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------CCTTCGGGTH
T ss_pred             CHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh---ccccc-cCCCCHHHHH
Confidence            999999999999999999999999999999999999999999999 999887653222111   11111 4567999999


Q ss_pred             HHHHHHhc--CCCcccceEEecCCccc
Q psy12833        229 QLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       229 ~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +.++||++  +.++||++|.+|||+++
T Consensus       254 ~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          254 PLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             HHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             HHHHHHhCccccCCCCCEEEECCCccc
Confidence            99999997  46899999999999864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-45  Score=301.18  Aligned_cols=239  Identities=29%  Similarity=0.475  Sum_probs=209.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            56899999999999999999999999999999999888777766655   567889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.+++++.+++|+.+++++++.+.|.|.++.      .++||++||..+..+.++
T Consensus       122 id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~  189 (285)
T 2c07_A          122 VDILVNNAGITRDNLFLR------MKNDEWEDVLRTNLNSLFYITQPISKRMINNR------YGRIINISSIVGLTGNVG  189 (285)
T ss_dssp             CCEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT------CEEEEEECCTHHHHCCTT
T ss_pred             CCEEEECCCCCCCCchhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC------CCEEEEECChhhccCCCC
Confidence            999999999875544444      78999999999999999999999999998765      689999999999999889


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      ...|+++|++++.|+++++.|+.+.||++++++||+++|++.....+...+.+....|. +++.+|+|+|+.+++++++ 
T Consensus       190 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~~~  268 (285)
T 2c07_A          190 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPA-GRMGTPEEVANLACFLSSDK  268 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCC-CCCCCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999998766555555555556666 8899999999999999974 


Q ss_pred             -CCcccceEEecCCccc
Q psy12833        238 -PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 -~~~~G~~i~~~gG~~~  253 (254)
                       .+++|++|.+|||+++
T Consensus       269 ~~~~~G~~i~v~gG~~~  285 (285)
T 2c07_A          269 SGYINGRVFVIDGGLSP  285 (285)
T ss_dssp             GTTCCSCEEEESTTSCC
T ss_pred             cCCCCCCEEEeCCCccC
Confidence             6799999999999874

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.3e-45  Score=299.46  Aligned_cols=235  Identities=24%  Similarity=0.310  Sum_probs=190.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.+++||++|+++++++++++.+.++++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56899999999999999999999999999999999999999998888889999999999999999999999999999999


Q ss_pred             EEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||||.... .++.+      .+.++|++.+++|+.++++++++++|.|.++...    .++||++||..+..+.++..
T Consensus       106 lVnnAg~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~----~g~IV~isS~~~~~~~~~~~  175 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMED------LTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPR----GGRIINNGSISATSPRPYSA  175 (272)
T ss_dssp             EEECCCCCCCSSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC----CEEEEEECCSSTTSCCTTCH
T ss_pred             EEECCCCCCCCCChhh------CCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCC----CcEEEEECchhhcCCCCCch
Confidence            9999998644 34444      7999999999999999999999999999876411    48999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-CC
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-PL  239 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~~  239 (254)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.+...+...+ .....+. +++.+|+|+|++++||++. +.
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~-~~~~~pedvA~~v~fL~s~~~~  253 (272)
T 4dyv_A          176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQ-ADLSIKV-EPVMDVAHVASAVVYMASLPLD  253 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------CHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchh-hhhcccc-cCCCCHHHHHHHHHHHhCCCCc
Confidence            9999999999999999999999999999999999999987665433222 2223444 7889999999999999974 34


Q ss_pred             cccceEEec
Q psy12833        240 INGEVIRID  248 (254)
Q Consensus       240 ~~G~~i~~~  248 (254)
                      .....+.++
T Consensus       254 ~~~~~i~i~  262 (272)
T 4dyv_A          254 ANVQFMTIM  262 (272)
T ss_dssp             SCCCEEEEE
T ss_pred             CccceEEEe
Confidence            444444444

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1e-44  Score=294.14  Aligned_cols=239  Identities=36%  Similarity=0.589  Sum_probs=192.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++   +.++.++++|++|+++++++++++.+.++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            679999999999999999999999999999998 67777666665544   56789999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.+++++.+++|+.+++++++.+.|.|.++.      .++||++||..+..+.+
T Consensus        83 ~~d~vi~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~  150 (247)
T 2hq1_A           83 RIDILVNNAGITRDTLMLK------MSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK------SGKIINITSIAGIIGNA  150 (247)
T ss_dssp             CCCEEEECC---------------------CHHHHHHTHHHHHHHHHHHHHHHHHHT------CEEEEEECC--------
T ss_pred             CCCEEEECCCCCCCCcccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEcChhhccCCC
Confidence            9999999999865444444      67889999999999999999999999998765      68999999999988888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|+++|++++.++++++.|+.++||++++++||+++|++.....+...+.+....|. +++.+|+|+|+.+.+++++
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~  229 (247)
T 2hq1_A          151 GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPL-KRFGTPEEVANVVGFLASD  229 (247)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCC-CCCCCHHHHHHHHHHHcCc
Confidence            899999999999999999999999999999999999999998765555544555555666 8899999999999999974


Q ss_pred             --CCcccceEEecCCccc
Q psy12833        238 --PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~~  253 (254)
                        .+++|+++++|||+++
T Consensus       230 ~~~~~~G~~~~v~gG~~~  247 (247)
T 2hq1_A          230 DSNYITGQVINIDGGLVM  247 (247)
T ss_dssp             GGTTCCSCEEEESTTC--
T ss_pred             ccccccCcEEEeCCCccC
Confidence              6789999999999875

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=2.2e-44  Score=293.25  Aligned_cols=238  Identities=26%  Similarity=0.405  Sum_probs=210.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCc-eEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDV-KFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+++++..++++.++ .++++|++|+++++++++++.+ ++++|
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id   87 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-VAPVS   87 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-hCCCc
Confidence            578999999999999999999999999999999999888887777776667 8899999999999999999998 89999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC-
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-  159 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~-  159 (254)
                      ++|||||.....++.+      .+.+++++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.+.. 
T Consensus        88 ~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~  155 (254)
T 2wsb_A           88 ILVNSAGIARLHDALE------TDDATWRQVMAVNVDGMFWASRAFGRAMVARG------AGAIVNLGSMSGTIVNRPQF  155 (254)
T ss_dssp             EEEECCCCCCCBCSTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCSSSC
T ss_pred             EEEECCccCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEEecchhccCCCCCc
Confidence            9999999876554444      78899999999999999999999999998876      6899999999998887777 


Q ss_pred             -ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        160 -VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       160 -~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                       ..|+++|++++.++++++.|+.++||++++++||+++|++.....  ++..+.+.+..|. ++..+|+|+|+.++++++
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  234 (254)
T 2wsb_A          156 ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM-GRCGEPSEIAAAALFLAS  234 (254)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhC
Confidence             899999999999999999999999999999999999999875432  2334444555666 889999999999999996


Q ss_pred             C--CCcccceEEecCCccc
Q psy12833        237 N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~  253 (254)
                      +  .+++|+++.+|||+++
T Consensus       235 ~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          235 PAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             cccccccCCEEEECCCEec
Confidence            4  6899999999999875

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=1.5e-44  Score=292.58  Aligned_cols=237  Identities=29%  Similarity=0.500  Sum_probs=210.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEE-eeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ||++|||||++|||++++++|+++|++|++ .+|+.+..++..+++   +.++.++++|++|+++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999998 478877766665544   5678899999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||.....++.+      .+.+++++.+++|+.+++++++.+.|.|.+++      .++||++||..+..+.++.
T Consensus        81 d~li~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~  148 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIR------MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR------KGRIINIASVVGLIGNIGQ  148 (244)
T ss_dssp             SEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCTHHHHCCTTC
T ss_pred             CEEEECCCCCCCcCccc------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC------CCEEEEECChhhcCCCCCC
Confidence            99999999876555544      78899999999999999999999999998765      6899999999999888899


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh-cC-
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII-TN-  237 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~-  237 (254)
                      ..|+++|++++.+++.++.|+.++||++++++||+++|++.....+...+......|. +++.+|+|+|+.+.+++ ++ 
T Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  227 (244)
T 1edo_A          149 ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPA  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTT-CSCBCHHHHHHHHHHHHHCSG
T ss_pred             ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999999999999999998766555555555556676 88999999999999999 43 


Q ss_pred             -CCcccceEEecCCccc
Q psy12833        238 -PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 -~~~~G~~i~~~gG~~~  253 (254)
                       .+++|+++.+|||+++
T Consensus       228 ~~~~~G~~~~v~gG~~~  244 (244)
T 1edo_A          228 ASYITGQAFTIDGGIAI  244 (244)
T ss_dssp             GGGCCSCEEEESTTTTC
T ss_pred             cCCcCCCEEEeCCCccC
Confidence             5789999999999864

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=9.7e-45  Score=297.43  Aligned_cols=240  Identities=17%  Similarity=0.204  Sum_probs=202.7

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||+  +|||++++++|+++|++|++++|+. +.++..+++   .....++++|++|+++++++++++.+.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            578999999999  9999999999999999999999987 333333322   2235889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTV-HSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||||......+  ..+..+ .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+..+
T Consensus        86 g~iD~lv~~Ag~~~~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~g~iv~isS~~~~~~  155 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQL--DGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--------GSALLTLSYLGAERA  155 (265)
T ss_dssp             SSEEEEEECCCCCCGGGG--SSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECGGGTSB
T ss_pred             CCCCEEEECCCCCCcccc--CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--------CCEEEEEcchhhccC
Confidence            999999999997643110  011223 478999999999999999999999998853        479999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .++...|+++|+++++|+++++.|++++||+||+++||+++|++.....  ++..+.+....|. +++.+|+|+|+.+++
T Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dva~~v~~  234 (265)
T 1qsg_A          156 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI-RRTVTIEDVGNSAAF  234 (265)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT-SSCCCHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC-CCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999875432  3334445555676 889999999999999


Q ss_pred             Hhc--CCCcccceEEecCCccc
Q psy12833        234 IIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +++  +.+++|++|.+|||+++
T Consensus       235 l~s~~~~~~tG~~~~vdgG~~~  256 (265)
T 1qsg_A          235 LCSDLSAGISGEVVHVDGGFSI  256 (265)
T ss_dssp             HTSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCchhcCccCCEEEECCCcCC
Confidence            997  36899999999999864

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-44  Score=294.56  Aligned_cols=240  Identities=26%  Similarity=0.406  Sum_probs=209.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++++|++|+++++++++++.+.++
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999776655444433    67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.+++++.+++|+.+++++++++.+.|.++..     .++||++||..+..+.+
T Consensus        92 ~id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~  160 (265)
T 1h5q_A           92 PISGLIANAGVSVVKPATE------LTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-----KGSIVVTSSMSSQIINQ  160 (265)
T ss_dssp             SEEEEEECCCCCCCSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCGGGTSCCE
T ss_pred             CCCEEEECCCcCCCCchhh------CCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCC-----CceEEEeCCchhhcccc
Confidence            9999999999876555555      789999999999999999999999999987531     38999999998876653


Q ss_pred             C-------CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        158 G-------QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       158 ~-------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      .       ...|+++|++++.++++++.|++++||++++++||+++|++.....+...+.+....|. +++.+|+|+|+.
T Consensus       161 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  239 (265)
T 1h5q_A          161 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPL-NRFAQPEEMTGQ  239 (265)
T ss_dssp             EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTT-SSCBCGGGGHHH
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcc-cCCCCHHHHHHH
Confidence            2       67899999999999999999999999999999999999999876555555555556676 889999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++++++  .+++|+.|.+|||+++
T Consensus       240 ~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          240 AILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHhhccCchhcCcCcEEEecCCEeC
Confidence            9999974  6899999999999875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=4.2e-44  Score=292.83  Aligned_cols=240  Identities=32%  Similarity=0.466  Sum_probs=210.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.++++|++|+++++++++++.+.++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999 766666655554   56788999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.+++++.+++|+.+++++++++++.|.++..     .++||++||..+..+.+
T Consensus        85 ~id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-----~~~iv~isS~~~~~~~~  153 (261)
T 1gee_A           85 KLDVMINNAGLENPVSSHE------MSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWP  153 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-----CCEEEEECCGGGTSCCT
T ss_pred             CCCEEEECCCCCCCCCccc------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-----CCEEEEeCCHHhcCCCC
Confidence            9999999999876555544      789999999999999999999999999987531     37999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      +...|+++|++++.+++.++.|++++||++++++||+++|++....  .++..+.+....|. ++..+|+|+|+.+++++
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  232 (261)
T 1gee_A          154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAAWLA  232 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999987543  13333444455666 88999999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .+++|+++.+|||+++
T Consensus       233 ~~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          233 SSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CccccCCCCcEEEEcCCccc
Confidence            74  6899999999999875

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=2.2e-44  Score=292.77  Aligned_cols=239  Identities=29%  Similarity=0.456  Sum_probs=209.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++++|++|+++++++++++.+.++++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999999888777776664  578899999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCC-cEEEEEeccccccCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLR-GVIINTASIAAYEGQSG  158 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~-~~ii~vss~~~~~~~~~  158 (254)
                      |++|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      . ++||++||..+..+.++
T Consensus        84 d~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~------~~~~iv~isS~~~~~~~~~  151 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEE------TTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG------LGASIINMSSIEGFVGDPS  151 (251)
T ss_dssp             CEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS------SCEEEEEECCGGGTSCCTT
T ss_pred             CEEEECCCCCCCCChhh------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC------CCCEEEEeCCchhccCCCC
Confidence            99999999865444444      78999999999999999999999999998764      4 79999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhc--cCCcEEEEEecCCccccccccchHHH-HHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKV-RNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ...|+++|++++.++++++.|+.  +.||++++++||+++|++........ ...+....|. +++.+|+|+|+.+.+++
T Consensus       152 ~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  230 (251)
T 1zk4_A          152 LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM-GHIGEPNDIAYICVYLA  230 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCC-CCCcCHHHHHHHHHHHc
Confidence            99999999999999999999998  88999999999999999876543221 1212233455 78899999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .+++|+.+.+|||+++
T Consensus       231 ~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          231 SNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CcccccccCcEEEECCCccC
Confidence            74  5899999999999875

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.6e-45  Score=294.23  Aligned_cols=222  Identities=23%  Similarity=0.270  Sum_probs=189.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            46899999999999999999999999999999999999988888887667999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.       ++||++||..+..+.++...
T Consensus        81 lvnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~iv~isS~~~~~~~~~~~~  147 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGV------YTAEQIRRVMESNLVSTILVAQQTVRLIGERG-------GVLANVLSSAAQVGKANESL  147 (235)
T ss_dssp             EEEECCCC------C------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------EEEEEECCEECCSSCSSHHH
T ss_pred             EEECCCCCCCCChHh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CEEEEEeCHHhcCCCCCCcH
Confidence            999999876555545      79999999999999999999999999998763       69999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC---C
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN---P  238 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~---~  238 (254)
                      |++||+|+++|+++++.|++++||+||+++||+++|++......         .+. .++.+|||+|+.+++++++   .
T Consensus       148 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~-~~~~~pedvA~~v~~l~~~~~~~  217 (235)
T 3l6e_A          148 YCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH---------VDP-SGFMTPEDAAAYMLDALEARSSC  217 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------CBCHHHHHHHHHHHTCCCSSE
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC---------CCC-cCCCCHHHHHHHHHHHHhCCCCc
Confidence            99999999999999999999999999999999999998754321         122 6788999999999999973   3


Q ss_pred             CcccceEE
Q psy12833        239 LINGEVIR  246 (254)
Q Consensus       239 ~~~G~~i~  246 (254)
                      +++|-.+.
T Consensus       218 ~i~~i~~~  225 (235)
T 3l6e_A          218 HVTDLFIG  225 (235)
T ss_dssp             EEEEEEEE
T ss_pred             ceeeEEEe
Confidence            56665544

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=4.3e-44  Score=290.53  Aligned_cols=238  Identities=33%  Similarity=0.563  Sum_probs=211.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|+++++++++++.+.++
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999988777665543    56789999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.+++++.+++|+.+++++++.++|.|.+++      .++||++||..+..+.+
T Consensus        85 ~~d~vi~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~  152 (248)
T 2pnf_A           85 GIDILVNNAGITRDKLFLR------MSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR------WGRIVNISSVVGFTGNV  152 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT------CEEEEEECCHHHHHCCT
T ss_pred             CCCEEEECCCCCCCCcccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC------CcEEEEEccHHhcCCCC
Confidence            9999999999876554444      78999999999999999999999999998765      68999999998888888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|+++|++++.+++.++.|+.+.||++++++||+++|++.....+...+.+....|. +++.+|+|+|+.+.+++++
T Consensus       153 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~  231 (248)
T 2pnf_A          153 GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPL-GRFGSPEEVANVVLFLCSE  231 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCC-CCccCHHHHHHHHHHHhCc
Confidence            889999999999999999999999999999999999999998766554444445555666 8899999999999999974


Q ss_pred             --CCcccceEEecCCcc
Q psy12833        238 --PLINGEVIRIDGALR  252 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~  252 (254)
                        .+++|+++.+|||++
T Consensus       232 ~~~~~~G~~~~v~gg~~  248 (248)
T 2pnf_A          232 LASYITGEVIHVNGGMF  248 (248)
T ss_dssp             GGTTCCSCEEEESTTCC
T ss_pred             hhhcCCCcEEEeCCCcC
Confidence              689999999999974

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3.2e-44  Score=296.36  Aligned_cols=239  Identities=24%  Similarity=0.356  Sum_probs=208.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            67899999999999999999999999999999999988766655443   668899999999999999999999999999


Q ss_pred             CcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC--
Q psy12833         79 LDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--  155 (254)
Q Consensus        79 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~--  155 (254)
                      +|++|||||.... .++.+     +.+.++|++.+++|+.+++.+++.+++.|.++.      .++||++||..+..+  
T Consensus       112 id~li~~Ag~~~~~~~~~~-----~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~  180 (279)
T 3ctm_A          112 IDVFVANAGVTWTQGPEID-----VDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG------KGSLIITSSISGKIVNI  180 (279)
T ss_dssp             CSEEEECGGGSTTC--CCC-----SSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCCTTSCC--
T ss_pred             CCEEEECCcccccCCcccc-----cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCeEEEECchHhccCCC
Confidence            9999999998654 33330     268899999999999999999999999998765      689999999999887  


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      .++...|+++|++++.++++++.|+++++ ++++++||+++|++.....++..+.+....|. +++.+|+|+|+.+++++
T Consensus       181 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~  258 (279)
T 3ctm_A          181 PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPL-GREGLTQELVGGYLYLA  258 (279)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTT-CSCBCGGGTHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCc-cCCcCHHHHHHHHHHHh
Confidence            77888999999999999999999999999 99999999999998765444444445556676 88999999999999999


Q ss_pred             cC--CCcccceEEecCCccc
Q psy12833        236 TN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++  .+++|++|.+|||+++
T Consensus       259 s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          259 SNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             SGGGTTCCSCEEEESTTCCC
T ss_pred             CccccCccCCEEEECCCeec
Confidence            74  6899999999999875

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=7.5e-45  Score=297.12  Aligned_cols=234  Identities=19%  Similarity=0.253  Sum_probs=202.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHH---cCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVR---EGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~---~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      |++|++|||||++|||++++++|++   +|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999   8999999999988887777665     4568899999999999999999999


Q ss_pred             H--HcCCCc--EEEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--cCCCCCCCcEEE
Q psy12833         74 D--SFGKLD--VNVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHEN--KLNEDGLRGVII  145 (254)
Q Consensus        74 ~--~~~~id--~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~~~~~~ii  145 (254)
                      +  .++++|  ++|||||....  .++.+.     .+.++|++.+++|+.++++++++++|.|.++  .      .++||
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~g~iv  152 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNV-----NDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL------SKTVV  152 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGC-----CCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC------EEEEE
T ss_pred             hccccccCCccEEEECCcccCCCCcchhcc-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC------CceEE
Confidence            8  678899  99999997543  222220     4789999999999999999999999999765  3      58999


Q ss_pred             EEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----HHHHHHHHhcCCCCCC
Q psy12833        146 NTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----EKVRNFLARSIPAPQR  220 (254)
Q Consensus       146 ~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~  220 (254)
                      ++||..+..+.++...|++||+|+++|+++++.|+++  |+||+|+||+++|++.....     ++..+.+....|. ++
T Consensus       153 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~-~~  229 (259)
T 1oaa_A          153 NISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GA  229 (259)
T ss_dssp             EECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT-TC
T ss_pred             EEcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhc-CC
Confidence            9999999999999999999999999999999999974  99999999999999865432     2333444445566 88


Q ss_pred             CCCHHHHHHHHHHHhc-CCCcccceEEecC
Q psy12833        221 LGHPDEFAQLVQSIIT-NPLINGEVIRIDG  249 (254)
Q Consensus       221 ~~~~~~va~~~~~l~~-~~~~~G~~i~~~g  249 (254)
                      ..+|+|+|+.++++++ +.+++|++|.+||
T Consensus       230 ~~~p~dvA~~v~~l~~~~~~itG~~i~vdg  259 (259)
T 1oaa_A          230 LVDCGTSAQKLLGLLQKDTFQSGAHVDFYD  259 (259)
T ss_dssp             SBCHHHHHHHHHHHHHHCCSCTTEEEETTC
T ss_pred             cCCHHHHHHHHHHHHhhccccCCcEEeccC
Confidence            9999999999999996 5799999999987

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1.6e-44  Score=293.37  Aligned_cols=234  Identities=22%  Similarity=0.322  Sum_probs=195.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++++|++|+++++++++++.+.++++|++||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            68999999999999999999999999999999998888888888778999999999999999999999999999999999


Q ss_pred             CCccCC-CccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         85 CAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        85 ~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      |||... ..++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++...|+
T Consensus        81 nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~~~~~~~~~~~Y~  148 (248)
T 3asu_A           81 NAGLALGMEPAHK------ASVEDWETMIDTNNKGLVYMTRAVLPGMVERN------HGHIINIGSTAGSWPYAGGNVYG  148 (248)
T ss_dssp             CCCCCCCCSCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCcCCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CceEEEEccchhccCCCCCchHH
Confidence            999763 334444      78999999999999999999999999998765      68999999999999999999999


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCcc-ccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-CCcc
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFD-TPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-PLIN  241 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-~~~~  241 (254)
                      +||+++++|+++++.|++++||+||+++||+++ |++.........+........ ....+|||+|+.+++++++ .+++
T Consensus       149 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~-~~~~~p~dvA~~v~~l~s~~~~~~  227 (248)
T 3asu_A          149 ATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQN-TVALTPEDVSEAVWWVSTLPAHVN  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------CCBCHHHHHHHHHHHHHSCTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhc-cCCCCHHHHHHHHHHHhcCCccce
Confidence            999999999999999999999999999999999 998642111000111111111 3346999999999999974 6899


Q ss_pred             cceEEecCCc
Q psy12833        242 GEVIRIDGAL  251 (254)
Q Consensus       242 G~~i~~~gG~  251 (254)
                      |+.+.++++.
T Consensus       228 g~~i~v~~~~  237 (248)
T 3asu_A          228 INTLEMMPVT  237 (248)
T ss_dssp             CCEEEECCTT
T ss_pred             eeEEEEcccc
Confidence            9999998763

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1e-43  Score=290.33  Aligned_cols=239  Identities=31%  Similarity=0.502  Sum_probs=209.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999987776665554   567899999999999999999999999999


Q ss_pred             CcEEEeCCccCC-CccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||... ..++.+      .+.+++++.+++|+.+++++++.+.|.|.++.      .++|+++||..+..+.+
T Consensus        91 id~vi~~Ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~  158 (260)
T 3awd_A           91 VDILVACAGICISEVKAED------MTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK------QGVIVAIGSMSGLIVNR  158 (260)
T ss_dssp             CCEEEECCCCCCCSCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCS
T ss_pred             CCEEEECCCCCCCCCCccc------CCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC------CCEEEEEecchhcccCC
Confidence            999999999765 333333      78899999999999999999999999998765      68999999999988777


Q ss_pred             CC--ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc-cc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        158 GQ--VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS-ML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       158 ~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      +.  ..|+++|++++.++++++.|++++||++++++||+++|++.. .. .+...+.+....|. +++.+|+|+|+.+++
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  237 (260)
T 3awd_A          159 PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM-GRVGQPDEVASVVQF  237 (260)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT-SSCBCHHHHHHHHHH
T ss_pred             CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc-CCCCCHHHHHHHHHH
Confidence            66  899999999999999999999999999999999999999875 22 23333444455666 889999999999999


Q ss_pred             HhcC--CCcccceEEecCCccc
Q psy12833        234 IITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++++  .+++|+.+++|||+++
T Consensus       238 l~~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          238 LASDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTT
T ss_pred             HhCchhccCCCcEEEECCceec
Confidence            9974  6899999999999875

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=6.9e-45  Score=294.84  Aligned_cols=230  Identities=20%  Similarity=0.241  Sum_probs=199.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-e--CCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLC-D--LPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ||++|||||++|||++++++|+++|++|+++ +  |+.+++++..+++ ..     +|+.|+++++++++++.+.++++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~-----~~~~~~~~v~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PG-----TIALAEQKPERLVDATLQHGEAID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TT-----EEECCCCCGGGHHHHHGGGSSCEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CC-----CcccCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999999 6  9988888777765 22     233477889999999999999999


Q ss_pred             EEEeCCccCCC---ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         81 VNVNCAGISCA---FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        81 ~li~~ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|||||....   .++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.+
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~------~g~iv~isS~~~~~~~~  142 (244)
T 1zmo_A           75 TIVSNDYIPRPMNRLPLEG------TSEADIRQMFEALSIFPILLLQSAIAPLRAAG------GASVIFITSSVGKKPLA  142 (244)
T ss_dssp             EEEECCCCCTTGGGCCSTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCGGGTSCCT
T ss_pred             EEEECCCcCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEECChhhCCCCC
Confidence            99999998655   44444      78999999999999999999999999998875      69999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc---ccch-HHHHHHHHh-cCCCCCCCCCHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL---SMLN-EKVRNFLAR-SIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~---~~~~-~~~~~~~~~-~~~~~~~~~~~~~va~~~~  232 (254)
                      +...|+++|+++++|+++++.|++++||+||+|+||+++|++.   .... ++..+.+.+ ..|. ++..+|||+|+.++
T Consensus       143 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pe~vA~~v~  221 (244)
T 1zmo_A          143 YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL-GRLGRPDEMGALIT  221 (244)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTT-CSCBCHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCC-CCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987   4432 122233333 5676 89999999999999


Q ss_pred             HHhcC--CCcccceEEecCCcc
Q psy12833        233 SIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      +|+++  .+++|++|.+|||++
T Consensus       222 ~l~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          222 FLASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HHHTTTTGGGTTCEEEESTTCC
T ss_pred             HHcCccccCccCCEEEeCCCCC
Confidence            99974  689999999999975

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.5e-45  Score=311.17  Aligned_cols=237  Identities=15%  Similarity=0.265  Sum_probs=200.4

Q ss_pred             CCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCC---------chhHHHHHHh------CCCceEEecCCCCH--H
Q psy12833          3 KGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPT---------SEGESVAKEL------GPDVKFAPVDVTSE--E   63 (254)
Q Consensus         3 ~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~~------~~~~~~~~~Dls~~--~   63 (254)
                      ++|++|||||++  |||+++|++|+++|++|++++|+.         ++++...+..      ...+.+++||+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999985  999999999999999999777654         2222222221      12367788888888  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCCcEEEeCCccCC--CccccccCCCCcCCHHHHHHHHHHHhHHHHHHH
Q psy12833         64 ------------------DVQKAVLLCKDSFGKLDVNVNCAGISC--AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA  123 (254)
Q Consensus        64 ------------------~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  123 (254)
                                        +++++++++.+.++++|++|||||+..  ..++.+      .+.++|++.+++|+.++++++
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~  154 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLN------TSRKGYLDALSKSSYSLISLC  154 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGG------CCHHHHHHHHHHHTHHHHHHH
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCccc------CCHHHHHHHHHHHhHHHHHHH
Confidence                              999999999999999999999999742  344444      799999999999999999999


Q ss_pred             HHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc-cchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccccc
Q psy12833        124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPLLS  201 (254)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~~~  201 (254)
                      +.++|.|.+        .|+||++||..+..+.++.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+++|++.+
T Consensus       155 ~~~~p~m~~--------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~  226 (329)
T 3lt0_A          155 KYFVNIMKP--------QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT  226 (329)
T ss_dssp             HHHGGGEEE--------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHH
T ss_pred             HHHHHHHhh--------CCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHh
Confidence            999999976        38999999999999999885 9999999999999999999998 8999999999999999876


Q ss_pred             cchH---------------------------------------------HHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        202 MLNE---------------------------------------------KVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       202 ~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ....                                             +..+......|. ++..+|+|+|+.++||++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~v~fL~s  305 (329)
T 3lt0_A          227 AINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKLLSTDIGSVASFLLS  305 (329)
T ss_dssp             TCC------------------------------------------CHHHHHHHHHHHHSSS-CSCCCHHHHHHHHHHHHS
T ss_pred             hhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcc-cCcCCHHHHHHHHHHHhC
Confidence            5311                                             124455567788 999999999999999997


Q ss_pred             --CCCcccceEEecCCcccC
Q psy12833        237 --NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~~  254 (254)
                        +.++||++|.+|||+++.
T Consensus       306 ~~a~~itG~~i~vdGG~~~~  325 (329)
T 3lt0_A          306 RESRAITGQTIYVDNGLNIM  325 (329)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             chhccccCcEEEEcCCeeEE
Confidence              479999999999999873

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=7.8e-44  Score=289.15  Aligned_cols=232  Identities=25%  Similarity=0.389  Sum_probs=198.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999988877776665   567899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++       .++||++||..+..+.++
T Consensus        85 id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  151 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVED------ADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-------KGTVVQMSSIAGRVNVRN  151 (247)
T ss_dssp             CSEEEECCCCCCCCCSTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCGGGTCCCTT
T ss_pred             CCEEEECCCCCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-------CCEEEEEccHHhcCCCCC
Confidence            999999999875544444      7899999999999999999999999999875       379999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-HHHHHHHHhcCCCCCCC--CCHHHHHHHHHHHh
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRL--GHPDEFAQLVQSII  235 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~va~~~~~l~  235 (254)
                      ...|+++|+++++|+++++.|++++||+||+|+||+++|++..... +...+.... .|  ++.  .+|||+|+.+++++
T Consensus       152 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~--~~~~~~~pedvA~~v~~l~  228 (247)
T 2jah_A          152 AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQ-RI--SQIRKLQAQDIAEAVRYAV  228 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHH-HT--TTSCCBCHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHh-cc--cccCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999875432 222222222 22  444  89999999999999


Q ss_pred             cC--CCcccceEEecCC
Q psy12833        236 TN--PLINGEVIRIDGA  250 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG  250 (254)
                      ++  .++++ .+.+++.
T Consensus       229 s~~~~~~~~-~i~i~~~  244 (247)
T 2jah_A          229 TAPHHATVH-EIFIRPT  244 (247)
T ss_dssp             HSCTTEEEE-EEEEEET
T ss_pred             CCCccCccc-eEEecCC
Confidence            74  34444 4566543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.7e-44  Score=296.91  Aligned_cols=237  Identities=22%  Similarity=0.296  Sum_probs=196.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC--CceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |+ |++|||||++|||++++++|+++|++|++++|+.+.++++.+++..  ++.++++|++|+++++++++++.+.++++
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            34 8999999999999999999999999999999998888887777643  78899999999999999999999999999


Q ss_pred             cEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCc-EEEEEeccccccCCC
Q psy12833         80 DVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRG-VIINTASIAAYEGQS  157 (254)
Q Consensus        80 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~-~ii~vss~~~~~~~~  157 (254)
                      |++|||||.... .++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .+ +||++||..+..+.+
T Consensus        99 D~lvnnAG~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~------~g~~IV~isS~~~~~~~~  166 (272)
T 2nwq_A           99 RGLINNAGLALGTDPAQS------CDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG------AGASIVNLGSVAGKWPYP  166 (272)
T ss_dssp             CEEEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC------TTCEEEEECCGGGTSCCT
T ss_pred             CEEEECCCCCCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCcEEEEeCCchhccCCC
Confidence            999999998653 44444      78999999999999999999999999998765      57 999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      +...|+++|+++++|+++++.|++++||+||+|+||+++|++.........+...+.... ....+|+|+|+.++++++ 
T Consensus       167 ~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~pedvA~~v~~l~s~  245 (272)
T 2nwq_A          167 GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAG-AHPIQPEDIAETIFWIMNQ  245 (272)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------C-CCCBCHHHHHHHHHHHHTS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhcc-CCCCCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999998643211101111111111 335799999999999997 


Q ss_pred             CCCcccceEEecCCcc
Q psy12833        237 NPLINGEVIRIDGALR  252 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~  252 (254)
                      ..+++|+.|.+|+|..
T Consensus       246 ~~~~~g~~i~v~~~~~  261 (272)
T 2nwq_A          246 PAHLNINSLEIMPVSQ  261 (272)
T ss_dssp             CTTEEEEEEEEEETTE
T ss_pred             CccCccceEEEeeccC
Confidence            4689999999998853

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.3e-44  Score=289.37  Aligned_cols=214  Identities=24%  Similarity=0.309  Sum_probs=190.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+                 +|++|+++++++++++    +++|+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------~D~~~~~~v~~~~~~~----g~id~   62 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------LDISDEKSVYHYFETI----GAFDH   62 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------CCTTCHHHHHHHHHHH----CSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------cCCCCHHHHHHHHHHh----CCCCE
Confidence            56899999999999999999999999999999999754                 8999999999998765    79999


Q ss_pred             EEeCCccC-CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGIS-CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||||.. ...++.+      .+.++|++.+++|+.++++++++++|.|.+        .++||++||..+..+.++..
T Consensus        63 lv~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~~~  128 (223)
T 3uce_A           63 LIVTAGSYAPAGKVVD------VEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--------GGSITLTSGMLSRKVVANTY  128 (223)
T ss_dssp             EEECCCCCCCCSCTTT------SCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--------EEEEEEECCGGGTSCCTTCH
T ss_pred             EEECCCCCCCCCCccc------CCHHHHHhhheeeeeeHHHHHHHHHhhccC--------CeEEEEecchhhccCCCCch
Confidence            99999986 3334434      799999999999999999999999998854        47999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH----HHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK----VRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      .|+++|+++++|+++++.|+++  |+||+++||+++|++.....+.    ..+......|. +++.+|+|+|++++++++
T Consensus       129 ~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~  205 (223)
T 3uce_A          129 VKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV-GKVGEASDIAMAYLFAIQ  205 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT-CSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC-CCccCHHHHHHHHHHHcc
Confidence            9999999999999999999987  9999999999999988665332    23445566777 999999999999999999


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      +++++|++|.+|||+++
T Consensus       206 ~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          206 NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             CTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcEEEecCCeec
Confidence            99999999999999875

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3e-44  Score=304.43  Aligned_cols=228  Identities=24%  Similarity=0.331  Sum_probs=200.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-------hHHHHHH---hCCCceEEecCCCCHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-------GESVAKE---LGPDVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.       +++..++   .+.++.+++||++|++++++++++
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999998774       3333333   367889999999999999999999


Q ss_pred             HHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         72 CKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      +.+.++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------~g~IV~iSS~~  190 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLD------TPTKRLDLMMNVNTRGTYLASKACIPYLKKSK------VAHILNISPPL  190 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTT------CCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS------SCEEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC------CCEEEEECCHH
Confidence            9999999999999999876655555      79999999999999999999999999998876      78999999999


Q ss_pred             cccC--CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCC-ccccccccchHHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        152 AYEG--QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGL-FDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       152 ~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      +..+  .++...|++||+++++|+++++.|++ .||+||+|+||. ++|++.+.        +....+. ++..+|+|+|
T Consensus       191 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~--------~~~~~~~-~r~~~pedvA  260 (346)
T 3kvo_A          191 NLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDM--------LGGPGIE-SQCRKVDIIA  260 (346)
T ss_dssp             CCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHH--------HCC--CG-GGCBCTHHHH
T ss_pred             HcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHh--------hcccccc-ccCCCHHHHH
Confidence            9887  78889999999999999999999999 999999999995 99986532        2222344 7888999999


Q ss_pred             HHHHHHhcC-CCcccceEEecCCcc
Q psy12833        229 QLVQSIITN-PLINGEVIRIDGALR  252 (254)
Q Consensus       229 ~~~~~l~~~-~~~~G~~i~~~gG~~  252 (254)
                      +.+++|+++ .++||+++ +|||+.
T Consensus       261 ~~v~~L~s~~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          261 DAAYSIFQKPKSFTGNFV-IDENIL  284 (346)
T ss_dssp             HHHHHHHTSCTTCCSCEE-EHHHHH
T ss_pred             HHHHHHHhcCCCCCceEE-ECCcEe
Confidence            999999974 68999999 999853

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=3e-44  Score=294.51  Aligned_cols=239  Identities=28%  Similarity=0.413  Sum_probs=185.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc-C
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF-G   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~   77 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.+ +
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999988777766554   5678899999999999999999999998 8


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.+++++++++.|.|.++.      .++||++||..+..+.+
T Consensus        92 ~id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~  159 (266)
T 1xq1_A           92 KLDILINNLGAIRSKPTLD------YTAEDFSFHISTNLESAYHLSQLAHPLLKASG------CGNIIFMSSIAGVVSAS  159 (266)
T ss_dssp             CCSEEEEECCC------CC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS------SCEEEEEC---------
T ss_pred             CCcEEEECCCCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEccchhccCCC
Confidence            9999999999865544444      78999999999999999999999999998765      68999999999999888


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      +...|+++|++++.++++++.|++++||++++++||++.|++..... +...+.+....|. +++.+|+|+|+.+.++++
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  238 (266)
T 1xq1_A          160 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL-GRFGEPEEVSSLVAFLCM  238 (266)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            88999999999999999999999999999999999999999865432 2222333334555 788999999999999997


Q ss_pred             C--CCcccceEEecCCccc
Q psy12833        237 N--PLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~  253 (254)
                      +  .+++|++|.+|||+++
T Consensus       239 ~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          239 PAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             GGGTTCCSCEEECCCCEEE
T ss_pred             ccccCccCcEEEEcCCccc
Confidence            4  6899999999999864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1.9e-44  Score=295.71  Aligned_cols=234  Identities=23%  Similarity=0.297  Sum_probs=201.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.+|++|||||++|||++++++|+++|++|++++|+.+++++..   ..++.++++|++|+++++++++++.+.++++|+
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN---LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC---CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh---cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            46899999999999999999999999999999999876654432   346889999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus        91 lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~------~g~IV~isS~~~~~~~~~~~~  158 (266)
T 3p19_A           91 IVNNAGMMLLGQIDT------QEANEWQRMFDVNVLGLLNGMQAVLAPMKARN------CGTIINISSIAGKKTFPDHAA  158 (266)
T ss_dssp             EEECCCCCCCCCTTT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCGGGTSCCTTCHH
T ss_pred             EEECCCcCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CcEEEEEcChhhCCCCCCCch
Confidence            999999876555544      79999999999999999999999999998876      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-HHHHHHHHh-cCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLAR-SIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++..... +...+.... ..|. ++..+|||+|++++|+++.  
T Consensus       159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDM-GGVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHT-TCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccc-cCCCCHHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999876543 222222222 3355 8899999999999999974  


Q ss_pred             CCcccceEEecCCc
Q psy12833        238 PLINGEVIRIDGAL  251 (254)
Q Consensus       238 ~~~~G~~i~~~gG~  251 (254)
                      ....++++....+.
T Consensus       238 ~~~~~~i~i~p~~~  251 (266)
T 3p19_A          238 NVCIREIALAPTKQ  251 (266)
T ss_dssp             TEEEEEEEEEETTC
T ss_pred             CccceeeEEecCCC
Confidence            45566766655554

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.1e-44  Score=292.29  Aligned_cols=240  Identities=34%  Similarity=0.566  Sum_probs=204.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---C-------CCceEEecCCCCHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---G-------PDVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~-------~~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +       .++.++++|++|++++++++++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            67899999999999999999999999999999999988877776654   2       5688999999999999999999


Q ss_pred             HHHHcCCC-cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         72 CKDSFGKL-DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        72 ~~~~~~~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      +.+.++++ |++|||||.....++.+      .+.+++++.+++|+.+++++++++.|.|.++..     .++||++||.
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-----~g~iv~isS~  153 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLH------MSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC-----RGSIINISSI  153 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCT
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhh------CCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC-----CceEEEECCh
Confidence            99999998 99999999876555555      789999999999999999999999999987520     3799999999


Q ss_pred             ccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        151 AAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      .+..+.++...|+++|++++.|++.++.|++++||++++++||+++|++.....+...+.+....|. +++.+|+|+|+.
T Consensus       154 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  232 (264)
T 2pd6_A          154 VGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPM-GHLGDPEDVADV  232 (264)
T ss_dssp             HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTT-CSCBCHHHHHHH
T ss_pred             hhccCCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCC-CCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998765433333333444565 788999999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++++++  .+++|+.+.+|||+++
T Consensus       233 ~~~l~~~~~~~~~G~~~~v~gg~~~  257 (264)
T 2pd6_A          233 VAFLASEDSGYITGTSVEVTGGLFM  257 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC--
T ss_pred             HHHHcCCcccCCCCCEEEECCCcee
Confidence            9999974  6899999999999875

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.2e-43  Score=290.41  Aligned_cols=229  Identities=27%  Similarity=0.354  Sum_probs=196.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.||++|+++++++++++.+.+++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            67899999999999999999999999999999999998888777665   567899999999999999999999999999


Q ss_pred             CcEEEeCCccC-CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGIS-CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||.. ...++.+      .+.++|++.+++|+.+++++++.++|.|.+++      .++||++||..+..+.+
T Consensus       107 id~lv~~Ag~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  174 (262)
T 3rkr_A          107 CDVLVNNAGVGWFGGPLHT------MKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK------RGHIINISSLAGKNPVA  174 (262)
T ss_dssp             CSEEEECCCCCCCSSCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CCEEEEECSSCSSCCCT
T ss_pred             CCEEEECCCccCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CceEEEEechhhcCCCC
Confidence            99999999983 3334444      79999999999999999999999999998876      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|+++|+++++|+++++.|++++||+|++++||+++|++.......        .+. .+.++|+|+|+.+.+|+++
T Consensus       175 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~-~~~~~p~dvA~~v~~l~s~  245 (262)
T 3rkr_A          175 DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK--------KSA-LGAIEPDDIADVVALLATQ  245 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------CCCHHHHHHHHHHHHTC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccc--------ccc-ccCCCHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999987543221        233 6778999999999999974


Q ss_pred             --CCcccceEEecCCc
Q psy12833        238 --PLINGEVIRIDGAL  251 (254)
Q Consensus       238 --~~~~G~~i~~~gG~  251 (254)
                        ..++|+++..+.|.
T Consensus       246 ~~~~~~g~~~i~p~~~  261 (262)
T 3rkr_A          246 ADQSFISEVLVRPTLK  261 (262)
T ss_dssp             CTTCCEEEEEEECCCC
T ss_pred             ccccccCcEEeccccC
Confidence              68899999887764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1e-43  Score=289.83  Aligned_cols=244  Identities=25%  Similarity=0.341  Sum_probs=210.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC-CchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP-TSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+ .+.+++..+++   +.++.++++|++|+++++++++++.+.++
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999998 77777666554   56789999999999999999999999999


Q ss_pred             CCcEEEeCCcc-CCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-C
Q psy12833         78 KLDVNVNCAGI-SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-G  155 (254)
Q Consensus        78 ~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-~  155 (254)
                      ++|++|||||. ....++.+      .+.+++++.+++|+.++++++++++|.|.++... ....++||++||..+.. +
T Consensus        85 ~id~vi~~Ag~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~  157 (258)
T 3afn_B           85 GIDVLINNAGGLVGRKPLPE------IDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKA-SGQTSAVISTGSIAGHTGG  157 (258)
T ss_dssp             SCSEEEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH-HTSCEEEEEECCTHHHHCC
T ss_pred             CCCEEEECCCCcCCcCcccc------CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccC-CCCCcEEEEecchhhccCC
Confidence            99999999997 44444444      7889999999999999999999999998754200 00137999999999888 7


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      .++...|+++|++++.+++.++.|++++||++++++||+++|++.....+...+.+.+..|. +++.+|+|+|+.+++++
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  236 (258)
T 3afn_B          158 GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPM-GRFGTAEEMAPAFLFFA  236 (258)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTT-CSCBCGGGTHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCC-CcCCCHHHHHHHHHHHh
Confidence            88889999999999999999999999999999999999999998765544444555556666 88999999999999999


Q ss_pred             cC--C-CcccceEEecCCccc
Q psy12833        236 TN--P-LINGEVIRIDGALRM  253 (254)
Q Consensus       236 ~~--~-~~~G~~i~~~gG~~~  253 (254)
                      ++  . +++|+++.+|||++.
T Consensus       237 ~~~~~~~~~G~~~~v~gg~~~  257 (258)
T 3afn_B          237 SHLASGYITGQVLDINGGQYK  257 (258)
T ss_dssp             CHHHHTTCCSEEEEESTTSSC
T ss_pred             CcchhccccCCEEeECCCccC
Confidence            74  3 889999999999863

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=2.9e-44  Score=314.32  Aligned_cols=237  Identities=27%  Similarity=0.412  Sum_probs=202.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc--hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCC-
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS--EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK-   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~-   78 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+..  .+++..++.  .+.+++||++|+++++++++++.+.+++ 
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999998643  333333443  4678999999999999999999999986 


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||+.....+.+      .+.++|++.+++|+.+++++++.+.+.|.+++      .++||++||..+..+.++
T Consensus       289 id~lV~nAGv~~~~~~~~------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~------~g~iV~iSS~a~~~g~~g  356 (454)
T 3u0b_A          289 VDILVNNAGITRDKLLAN------MDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE------GGRVIGLSSMAGIAGNRG  356 (454)
T ss_dssp             CSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT------TCEEEEECCHHHHHCCTT
T ss_pred             ceEEEECCcccCCCcccc------CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC------CCEEEEEeChHhCCCCCC
Confidence            999999999887666655      89999999999999999999999999887765      689999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      +..|+++|+++++|+++++.|++++||+||+|+||+++|++.........+......+. ++..+|+|+|+.+.||++  
T Consensus       357 ~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l-~r~g~pedvA~~v~fL~s~~  435 (454)
T 3u0b_A          357 QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSL-FQGGQPVDVAELIAYFASPA  435 (454)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTT-SSCBCHHHHHHHHHHHHCGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccc-cCCCCHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999999999999999876544433444445566 888999999999999997  


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      +.++|||+|.+|||.++
T Consensus       436 a~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          436 SNAVTGNTIRVCGQAML  452 (454)
T ss_dssp             GTTCCSCEEEESSSBSC
T ss_pred             cCCCCCcEEEECCcccc
Confidence            47999999999999875

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=3.9e-43  Score=285.98  Aligned_cols=237  Identities=27%  Similarity=0.441  Sum_probs=209.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+++
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999988777666554   567889999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++ +      .+.+++++.+++|+.+++++++.+.|.|.++.      .++||++||..+..+.++
T Consensus        89 ~d~vi~~Ag~~~~~~~-~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~  155 (255)
T 1fmc_A           89 VDILVNNAGGGGPKPF-D------MPMADFRRAYELNVFSFFHLSQLVAPEMEKNG------GGVILTITSMAAENKNIN  155 (255)
T ss_dssp             CCEEEECCCCCCCCCT-T------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTCCCTT
T ss_pred             CCEEEECCCCCCCCCC-C------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CcEEEEEcchhhcCCCCC
Confidence            9999999998654333 3      68899999999999999999999999998765      689999999999999889


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      ...|+++|++++.+++.++.|++++||++++++||++.|++.... .+...+......|. +++++|+|+|+.+++++++
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~  234 (255)
T 1fmc_A          156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI-RRLGQPQDIANAALFLCSP  234 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS-CSCBCHHHHHHHHHHHHSG
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc-ccCCCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999986542 34444445555666 8899999999999999974


Q ss_pred             --CCcccceEEecCCcc
Q psy12833        238 --PLINGEVIRIDGALR  252 (254)
Q Consensus       238 --~~~~G~~i~~~gG~~  252 (254)
                        .+++|++|++|||..
T Consensus       235 ~~~~~~G~~~~v~gg~~  251 (255)
T 1fmc_A          235 AASWVSGQILTVSGGGV  251 (255)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             ccccCCCcEEEECCcee
Confidence              578999999999975

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=8.1e-44  Score=290.22  Aligned_cols=230  Identities=19%  Similarity=0.274  Sum_probs=199.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH--HhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK--ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+  +.+.++.++     |+++++++++++.+.++++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEE
Confidence            789999999999999999999999999999999887766543  224455444     6778889999999999999999


Q ss_pred             EeCCccC-CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         83 VNCAGIS-CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        83 i~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      |||||.. ...++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+..+.++...
T Consensus        77 v~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  144 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDK------YAVEDYRGAVEALQIRPFALVNAVASQMKKRK------SGHIIFITSATPFGPWKELST  144 (254)
T ss_dssp             EEECCCCCCCCCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCSTTTSCCTTCHH
T ss_pred             EECCCcCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEECCcccccCCCCchH
Confidence            9999986 4444444      78999999999999999999999999998775      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCc---------cccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF---------DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      |++||+++++|+++++.|++++||+||+++||++         +|++.... ++..+.+....|. ++..+|+|+|+.++
T Consensus       145 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~-~~~~~~~~~~~p~-~~~~~p~dvA~~v~  222 (254)
T 1zmt_A          145 YTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN-PEHVAHVKKVTAL-QRLGTQKELGELVA  222 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC-HHHHHHHHHHSSS-SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC-hHHHHHHhccCCC-CCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999         88876543 2333344455676 88999999999999


Q ss_pred             HHhcC--CCcccceEEecCCccc
Q psy12833        233 SIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +|+++  .+++|+++.+|||+++
T Consensus       223 ~l~s~~~~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          223 FLASGSCDYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             HHHTTSCGGGTTCEEEESTTCCC
T ss_pred             HHhCcccCCccCCEEEECCCchh
Confidence            99974  5899999999999875

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-43  Score=286.45  Aligned_cols=225  Identities=24%  Similarity=0.343  Sum_probs=198.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCC--CCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDV--TSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl--s~~~~~~~~~~~~~~~   75 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+++++..+++    ..++.++.+|+  +|.++++++++++.+.
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999998888877765    25677788777  9999999999999999


Q ss_pred             cCCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         76 FGKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        76 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                      ++++|++|||||.... .++.+      .+.++|++.+++|+.+++++++.++|.|.+++      .++||++||..+..
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~  159 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGPRTPLEQ------LPDEDFMQVMHVNVNATFMLTRALLPLLKRSE------DASIAFTSSSVGRK  159 (247)
T ss_dssp             HSCCSEEEECCCCCCCCSCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS------SEEEEEECCGGGTS
T ss_pred             CCCCCEEEECCccCCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC------CCeEEEEcchhhcC
Confidence            9999999999998533 34444      79999999999999999999999999998776      68999999999999


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      +.++...|+++|+|+++|+++++.|+.+ .||+||+++||+++|++.....        ...+. .+..+|+|+|+.++|
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~-~~~~~p~dva~~~~~  230 (247)
T 3i1j_A          160 GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAY--------PDENP-LNNPAPEDIMPVYLY  230 (247)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHS--------TTSCG-GGSCCGGGGTHHHHH
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcc--------cccCc-cCCCCHHHHHHHHHH
Confidence            9999999999999999999999999977 8999999999999998753211        11122 567799999999999


Q ss_pred             Hhc--CCCcccceEEe
Q psy12833        234 IIT--NPLINGEVIRI  247 (254)
Q Consensus       234 l~~--~~~~~G~~i~~  247 (254)
                      |++  +.++|||+|++
T Consensus       231 l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          231 LMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHSGGGTTCCSCEEEC
T ss_pred             HhCchhccccCeeecC
Confidence            996  47999999986

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.6e-43  Score=284.54  Aligned_cols=236  Identities=29%  Similarity=0.491  Sum_probs=208.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh---CCCceE-EecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKEL---GPDVKF-APVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~---~~~~~~-~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++   +.++.+ +.+|++|+++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999999999999998 88877777665554   556777 999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.+++++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++
T Consensus        81 ~d~li~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~  148 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVR------MKDEDWEAVLEANLSAVFRTTREAVKLMMKAR------FGRIVNITSVVGILGNPG  148 (245)
T ss_dssp             CCEEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCTHHHHCCSS
T ss_pred             CCEEEECCCCCCCCCccc------CCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC------CCEEEEEeChhhccCCCC
Confidence            999999999876555555      78999999999999999999999999998765      689999999999888888


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      ...|+++|++++.+++.++.|+.++||++++++||+++|++.....+...+.+....|. +++.+|+|+|+.+.+++++ 
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~  227 (245)
T 2ph3_A          149 QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPA-GRFGRPEEVAEAVAFLVSEK  227 (245)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHTSGG
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999999998765544444555555666 8899999999999999974 


Q ss_pred             -CCcccceEEecCCcc
Q psy12833        238 -PLINGEVIRIDGALR  252 (254)
Q Consensus       238 -~~~~G~~i~~~gG~~  252 (254)
                       .+++|+++.+|||++
T Consensus       228 ~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          228 AGYITGQTLCVDGGLT  243 (245)
T ss_dssp             GTTCCSCEEEESTTCS
T ss_pred             cccccCCEEEECCCCC
Confidence             578999999999975

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.7e-42  Score=285.69  Aligned_cols=240  Identities=30%  Similarity=0.526  Sum_probs=207.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC--CceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP--DVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..++++.  ++.++++|++|+++++++++++.+.++++
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999998777777666643  78999999999999999999999999999


Q ss_pred             cEEEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         80 DVNVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        80 d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      |++|||||....  .++.+      .+.++|++.+++|+.+++++++++.|.|.++.      .++||++||..+..+.+
T Consensus        94 d~li~~Ag~~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~  161 (278)
T 2bgk_A           94 DIMFGNVGVLSTTPYSILE------AGNEDFKRVMDINVYGAFLVAKHAARVMIPAK------KGSIVFTASISSFTAGE  161 (278)
T ss_dssp             CEEEECCCCCCSSCSSTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT------CEEEEEECCGGGTCCCT
T ss_pred             CEEEECCcccCCCCCChhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC------CCeEEEEeeccccCCCC
Confidence            999999997542  22233      78899999999999999999999999998765      68999999999998887


Q ss_pred             -CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHHHHHHHHhcCCC-CCCCCCHHHHHHHHH
Q psy12833        158 -GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPA-PQRLGHPDEFAQLVQ  232 (254)
Q Consensus       158 -~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~va~~~~  232 (254)
                       +...|+++|++++.+++.++.|++++||++++++||++.|++....   .+...+.+....+. .+++.+|+|+|+.++
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (278)
T 2bgk_A          162 GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVA  241 (278)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHH
Confidence             7889999999999999999999999999999999999999986543   12333333333321 277899999999999


Q ss_pred             HHhcC--CCcccceEEecCCccc
Q psy12833        233 SIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++++  .+++|+++.+|||.++
T Consensus       242 ~l~~~~~~~~~G~~~~v~gg~~~  264 (278)
T 2bgk_A          242 YLAGDESKYVSGLNLVIDGGYTR  264 (278)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHcCcccccCCCCEEEECCcccc
Confidence            99963  6899999999999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.1e-44  Score=294.56  Aligned_cols=225  Identities=24%  Similarity=0.330  Sum_probs=187.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +..+.+++||++|+++++++++++.+.++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999998887777665    33458999999999999999999999999


Q ss_pred             CCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      ++|++|||||.... .++.+      .+.++|++.+++|+.++++++++++|.|.++...    .++||++||..+..+.
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~----~g~IV~isS~~~~~~~  180 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEE------VTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPR----GGRIINNGSISAQTPR  180 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC----CEEEEEECCGGGTCCC
T ss_pred             CCCEEEECCCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC----CcEEEEECCHHhCCCC
Confidence            99999999998644 44444      7999999999999999999999999999876311    4899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...+...+ .....+. ++..+|||+|++++||++
T Consensus       181 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~-~~~~~pedvA~~v~fL~s  258 (281)
T 4dry_A          181 PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQ-ANGEVAA-EPTIPIEHIAEAVVYMAS  258 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEEC-TTSCEEE-CCCBCHHHHHHHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhh-hhhcccc-cCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999987543211100 1112333 778899999999999998


Q ss_pred             CC
Q psy12833        237 NP  238 (254)
Q Consensus       237 ~~  238 (254)
                      .+
T Consensus       259 ~~  260 (281)
T 4dry_A          259 LP  260 (281)
T ss_dssp             SC
T ss_pred             CC
Confidence            53

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-43  Score=285.44  Aligned_cols=227  Identities=22%  Similarity=0.317  Sum_probs=194.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..    ++++ ++.++ +|+  .++++++++++    .++|+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~-~~~~~-~D~--~~~~~~~~~~~----~~iD~   84 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRSG-HRYVV-CDL--RKDLDLLFEKV----KEVDI   84 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHTC-SEEEE-CCT--TTCHHHHHHHS----CCCSE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----HhhC-CeEEE-eeH--HHHHHHHHHHh----cCCCE
Confidence            5799999999999999999999999999999999986332    3333 56777 999  45666666655    38999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++...
T Consensus        85 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  152 (249)
T 1o5i_A           85 LVLNAGGPKAGFFDE------LTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG------WGRIVAITSFSVISPIENLYT  152 (249)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CcEEEEEcchHhcCCCCCCch
Confidence            999999876555555      78999999999999999999999999998875      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHH-HHHhcCCCCCCCCCHHHHHHHHHHHhcC--C
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN-FLARSIPAPQRLGHPDEFAQLVQSIITN--P  238 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~va~~~~~l~~~--~  238 (254)
                      |+++|+++++|+++++.|++++||++++++||+++|++.....+...+ .+....|. +++.+|+|+|+.+++++++  .
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~i~~l~s~~~~  231 (249)
T 1o5i_A          153 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKAS  231 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcccc
Confidence            999999999999999999999999999999999999986543333333 44455676 8899999999999999973  6


Q ss_pred             CcccceEEecCCccc
Q psy12833        239 LINGEVIRIDGALRM  253 (254)
Q Consensus       239 ~~~G~~i~~~gG~~~  253 (254)
                      +++|+++.+|||+++
T Consensus       232 ~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          232 YLTGQTIVVDGGLSK  246 (249)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCCCCEEEECCCccc
Confidence            899999999999875

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=7.6e-43  Score=291.24  Aligned_cols=239  Identities=25%  Similarity=0.341  Sum_probs=205.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++++|++|+++++++++++.+.++
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999988777666655    67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.+++++.+++|+.+++++++.+.+.|.++..     .++||++||..+..+.+
T Consensus       104 ~id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-----~~~iv~isS~~~~~~~~  172 (302)
T 1w6u_A          104 HPNIVINNAAGNFISPTER------LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-----GAAFLSITTIYAETGSG  172 (302)
T ss_dssp             SCSEEEECCCCCCCSCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CEEEEEECCTHHHHCCT
T ss_pred             CCCEEEECCCCCCCCcccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-----CCEEEEEcccccccCCC
Confidence            9999999999865555444      789999999999999999999999999974321     58999999999999989


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccc-ccccchH--HHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP-LLSMLNE--KVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +...|+++|++++.++++++.+++++||++++++||+++|+ +.....+  ...+.+....|. +++.+|+|+|+.++++
T Consensus       173 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dva~~~~~l  251 (302)
T 1w6u_A          173 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC-GRLGTVEELANLAAFL  251 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT-SSCBCHHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc-CCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999997 4333211  111234455666 8899999999999999


Q ss_pred             hcC--CCcccceEEecCCcc
Q psy12833        235 ITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~  252 (254)
                      +++  .+++|+.+.+|||..
T Consensus       252 ~~~~~~~~~G~~~~v~gg~~  271 (302)
T 1w6u_A          252 CSDYASWINGAVIKFDGGEE  271 (302)
T ss_dssp             TSGGGTTCCSCEEEESTTHH
T ss_pred             cCCcccccCCCEEEECCCee
Confidence            973  678999999999975

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-43  Score=290.31  Aligned_cols=234  Identities=29%  Similarity=0.490  Sum_probs=197.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC-----CCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG-----PDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ||++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.     .++.++++|++|+++++++++++.+.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            6889999999999999999999999999999999999887776665552     35788999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++|||||..              +.++|++.+++|+.+++.+++.++|.|.++..   ...++||++||..+..+
T Consensus        84 ~g~id~lv~~Ag~~--------------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~  146 (267)
T 2gdz_A           84 FGRLDILVNNAGVN--------------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG---GEGGIIINMSSLAGLMP  146 (267)
T ss_dssp             HSCCCEEEECCCCC--------------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT---CCCEEEEEECCGGGTSC
T ss_pred             cCCCCEEEECCCCC--------------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccC---CCCCEEEEeCCccccCC
Confidence            99999999999964              23568899999999999999999999976521   01489999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHH--HHHhccCCcEEEEEecCCccccccccch-HHH-------HHHHHhcCCCCCCCCCHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPM--ARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKV-------RNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~l--a~e~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~  225 (254)
                      .++...|+++|++++++++++  +.|++++||+||+|+||+++|++..... +..       .+.+....+. .+.++|+
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  225 (267)
T 2gdz_A          147 VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY-YGILDPP  225 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHH-HCCBCHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhcc-ccCCCHH
Confidence            899999999999999999995  6899999999999999999999865432 110       0111111122 3467999


Q ss_pred             HHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        226 EFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       226 ~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      |+|+.+++++++++++|++|.++||..
T Consensus       226 dvA~~v~~l~s~~~~~G~~~~v~gg~~  252 (267)
T 2gdz_A          226 LIANGLITLIEDDALNGAIMKITTSKG  252 (267)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEEEETTTE
T ss_pred             HHHHHHHHHhcCcCCCCcEEEecCCCc
Confidence            999999999998889999999999874

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.3e-42  Score=281.23  Aligned_cols=235  Identities=22%  Similarity=0.344  Sum_probs=202.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.++++++.+++. ++.++++|++|+++++++++    .++++|+
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~----~~~~id~   79 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERALG----SVGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHT----TCCCCCE
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CCCEEEEeCCCHHHHHHHHH----HcCCCCE
Confidence            679999999999999999999999999999999999888777766653 56788999999999988876    5678999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.+++++.+++|+.+++++++++.+.|.++..     .++||++||..+..+.++...
T Consensus        80 vi~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~  148 (244)
T 3d3w_A           80 LVNNAAVALLQPFLE------VTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-----PGAIVNVSSQCSQRAVTNHSV  148 (244)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCccCCCcchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-----CcEEEEeCchhhccCCCCCch
Confidence            999999876555544      788999999999999999999999999986521     389999999999999889999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      |+++|++++.++++++.|++++||++++++||+++|++....  .+...+.+.+..|. +++.+|+|+|+.+++++++  
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  227 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL-GKFAEVEHVVNAILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCC-CCCcCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999999986431  12222344455666 8899999999999999974  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      .+++|++|.+|||+++
T Consensus       228 ~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          228 GMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCCEEEECCCccC
Confidence            5899999999999874

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-42  Score=279.71  Aligned_cols=238  Identities=53%  Similarity=0.799  Sum_probs=203.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .        .++.++++|++|+++++++++++ +.++++|++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li   71 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVV   71 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEE
Confidence            689999999999999999999999999999999875 2        34688999999999999999999 8889999999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      ||||......+.+..  .+.+.+++++.+++|+.+++++++++.+.|.++........++||++||..+..+.++...|+
T Consensus        72 ~~ag~~~~~~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  149 (242)
T 1uay_A           72 SAAGVGLAEKILGKE--GPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA  149 (242)
T ss_dssp             ECCCCCCCCCSBCSS--SBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHH
T ss_pred             EcccccCcccccccc--cccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhh
Confidence            999986554443311  113456999999999999999999999999875311111235999999999999988999999


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccc
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGE  243 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~  243 (254)
                      ++|++++.+++.++.|++++||++++++||+++|++.....+...+.+....|.++++.+|+|+|+.+++++++++++|+
T Consensus       150 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~  229 (242)
T 1uay_A          150 ASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGE  229 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcCCCCCCc
Confidence            99999999999999999999999999999999999876655554555555555447889999999999999988899999


Q ss_pred             eEEecCCccc
Q psy12833        244 VIRIDGALRM  253 (254)
Q Consensus       244 ~i~~~gG~~~  253 (254)
                      .|.+|||+++
T Consensus       230 ~~~v~gG~~~  239 (242)
T 1uay_A          230 VVRLDGALRM  239 (242)
T ss_dssp             EEEESTTCCC
T ss_pred             EEEEcCCeec
Confidence            9999999875

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=5.4e-43  Score=282.07  Aligned_cols=226  Identities=22%  Similarity=0.291  Sum_probs=198.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++|++|||||++|||++++++|+++|++|++++|+.+++++..+++    +.++.+++||++|+++++++++++.+.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999999988877766544    678999999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++       .+++|+++|..+..+.++
T Consensus        81 id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-------~~~ii~~sS~~~~~~~~~  147 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEE------LSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-------GGLALVTTSDVSARLIPY  147 (235)
T ss_dssp             CSEEEECCCCCCCCCTTT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCGGGSSCCTT
T ss_pred             CCEEEECCccccccCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCcEEEEecchhcccCCC
Confidence            999999999876555544      7999999999999999999999999999554       589999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      ...|+++|+++++|+++++  +...||+|++++||+++|++.......        .+. .+..+|||+|+.+++|+++ 
T Consensus       148 ~~~Y~~sKaa~~~~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~--------~~~-~~~~~p~dva~~v~~l~~~~  216 (235)
T 3l77_A          148 GGGYVSTKWAARALVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGK--------PKE-KGYLKPDEIAEAVRCLLKLP  216 (235)
T ss_dssp             CHHHHHHHHHHHHHHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCC--------CGG-GTCBCHHHHHHHHHHHHTSC
T ss_pred             cchHHHHHHHHHHHHHHHh--hcCCCeEEEEEeCCccccccccccCCc--------ccc-cCCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999994  446799999999999999987553321        111 4678999999999999974 


Q ss_pred             -CCcccceEEecCCcc
Q psy12833        238 -PLINGEVIRIDGALR  252 (254)
Q Consensus       238 -~~~~G~~i~~~gG~~  252 (254)
                       ..++|+++..|+|..
T Consensus       217 ~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          217 KDVRVEELMLRSVYQR  232 (235)
T ss_dssp             TTCCCCEEEECCTTSC
T ss_pred             CCCccceEEEeecccC
Confidence             578999999999875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-42  Score=289.91  Aligned_cols=238  Identities=28%  Similarity=0.419  Sum_probs=204.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++        +.++.++++|++|+++++++++++.
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999988777666654        4578999999999999999999999


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                      +.++++|++|||||.....++.+      .+.+++++.+++|+.+++++++++++.+.++.      .++||++||.. .
T Consensus        96 ~~~g~id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~~~iv~isS~~-~  162 (303)
T 1yxm_A           96 DTFGKINFLVNNGGGQFLSPAEH------ISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH------GGSIVNIIVPT-K  162 (303)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH------CEEEEEECCCC-T
T ss_pred             HHcCCCCEEEECCCCCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc------CCeEEEEEeec-c
Confidence            99999999999999765544444      78999999999999999999999999665544      58999999998 7


Q ss_pred             cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc-ccch---HHHHHHHHhcCCCCCCCCCHHHHHH
Q psy12833        154 EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL-SMLN---EKVRNFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~va~  229 (254)
                      .+.++...|+++|+++.++++.++.|+.++||++++++||+++|++. ....   +...+......|. ++..+|+|+|+
T Consensus       163 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~  241 (303)
T 1yxm_A          163 AGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPEEVSS  241 (303)
T ss_dssp             TCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT-SSCBCTHHHHH
T ss_pred             cCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcc-cCCCCHHHHHH
Confidence            78888899999999999999999999999999999999999999952 1111   1222223344566 88999999999


Q ss_pred             HHHHHhcC--CCcccceEEecCCccc
Q psy12833        230 LVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       230 ~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      .+++++++  .+++|+++.+|||.++
T Consensus       242 ~i~~l~~~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          242 VVCFLLSPAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhCcccccCCCcEEEECCCeec
Confidence            99999974  6899999999999864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.6e-43  Score=288.19  Aligned_cols=240  Identities=20%  Similarity=0.239  Sum_probs=191.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHH-cC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDS-FG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~-~~   77 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+. ++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            67999999999999999999999999999999999988777766655   567889999999999999999999886 89


Q ss_pred             CCcEEEeCCccCCCcccc-ccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNCAGISCAFKIF-NYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      ++|++|||||........ ...+..+.+.++|++.+++|+.+++++++.+.|.|.++.      .++||++||..+..+.
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  156 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG------QGLIVVISSPGSLQYM  156 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT------CCEEEEECCGGGTSCC
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC------CcEEEEEcChhhcCCC
Confidence            999999999532110000 011222368899999999999999999999999998765      6899999999888754


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH--HH-HHHHh--cCCCCCCCCCHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK--VR-NFLAR--SIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~--~~-~~~~~--~~~~~~~~~~~~~va~~~  231 (254)
                       +...|++||+++++|+++++.|++++||+||+++||+++|++.......  .. .....  ..+. ++..+|||+|+.+
T Consensus       157 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~~v  234 (260)
T 2qq5_A          157 -FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAF-SSAETTELSGKCV  234 (260)
T ss_dssp             -SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------CHHHHHHHHHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhh-ccCCCHHHHHHHH
Confidence             4578999999999999999999999999999999999999986542211  10 00011  1233 5567899999999


Q ss_pred             HHHhcCC---CcccceEEecC
Q psy12833        232 QSIITNP---LINGEVIRIDG  249 (254)
Q Consensus       232 ~~l~~~~---~~~G~~i~~~g  249 (254)
                      +||++++   ++||++|.+|+
T Consensus       235 ~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          235 VALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHTCTTGGGGTTCEEEHHH
T ss_pred             HHHhcCcccccccceeechhh
Confidence            9999753   68999998874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-41  Score=275.98  Aligned_cols=235  Identities=24%  Similarity=0.360  Sum_probs=203.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.+++..++. .++.++++|++|+++++++++    .++++|+
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~----~~~~id~   79 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGDWDATEKALG----GIGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHT----TCCCCSE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCCcEEecCCCHHHHHHHHH----HcCCCCE
Confidence            67899999999999999999999999999999999988777766654 357788999999999988887    5678999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.+++++.+++|+.+++++++.+.+.|.++..     .++||++||..+..+.++...
T Consensus        80 vi~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~  148 (244)
T 1cyd_A           80 LVNNAALVIMQPFLE------VTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-----PGSIVNVSSMVAHVTFPNLIT  148 (244)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCcccCCCCccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-----CeEEEEEcchhhcCCCCCcch
Confidence            999999876555545      789999999999999999999999999987531     379999999999999899999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--  237 (254)
                      |+++|++++.+++.++.|++++||++++++||++.|++....  .+...+.+.+..|. +++.+|+|+|+.+++++++  
T Consensus       149 Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  227 (244)
T 1cyd_A          149 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL-RKFAEVEDVVNSILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCc-cCCCCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999976422  23333444455666 8899999999999999974  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      .+++|+.+.+|||+++
T Consensus       228 ~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          228 ASTSGGGILVDAGYLA  243 (244)
T ss_dssp             TTCCSSEEEESTTGGG
T ss_pred             hcccCCEEEECCCccC
Confidence            5899999999999864

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=9.8e-44  Score=295.25  Aligned_cols=227  Identities=23%  Similarity=0.302  Sum_probs=187.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+++++..++++.++.++++|++|+++++++++++    +++|+
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----~~iD~   89 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV----SGADV   89 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC----CCEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc----CCCCE
Confidence            57999999999999999999999999999999999999998888888888999999999999999998876    68999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG------  155 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~------  155 (254)
                      +|||||+....  ..      .+.+++++.+++|+.++++++++++|.|.          .+||++||..+..+      
T Consensus        90 lv~nAg~~~~~--~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~----------~riv~isS~~~~~~~~~~~~  151 (291)
T 3rd5_A           90 LINNAGIMAVP--YA------LTVDGFESQIGTNHLGHFALTNLLLPRLT----------DRVVTVSSMAHWPGRINLED  151 (291)
T ss_dssp             EEECCCCCSCC--CC------BCTTSCBHHHHHHTHHHHHHHHHHGGGEE----------EEEEEECCGGGTTCCCCSSC
T ss_pred             EEECCcCCCCc--cc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hheeEeechhhccCCCCccc
Confidence            99999986422  22      57788999999999999999999999874          37999999988754      


Q ss_pred             -------CCCCccchhchHHHHHhHHHHHHHhccCC--cEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCC-CHH
Q psy12833        156 -------QSGQVAYSASKSGIVGMTLPMARDLAGAG--IRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLG-HPD  225 (254)
Q Consensus       156 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  225 (254)
                             .++...|++||+++++|++.++.|++++|  |++++++||+++|++.+...+...+.... .+. ++.. +|+
T Consensus       152 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~-~~~~~~~~  229 (291)
T 3rd5_A          152 LNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMS-AAT-RVVATDAD  229 (291)
T ss_dssp             TTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------CHHHH
T ss_pred             ccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHH-HHH-HHHhCCHH
Confidence                   34567899999999999999999999888  99999999999999987654443333222 333 4444 499


Q ss_pred             HHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        226 EFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       226 ~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      |+|+.+++++++++++|+.+.+|||+.
T Consensus       230 ~~A~~~~~l~~~~~~~G~~~~vdgG~~  256 (291)
T 3rd5_A          230 FGARQTLYAASQDLPGDSFVGPRFGYL  256 (291)
T ss_dssp             HHHHHHHHHHHSCCCTTCEEEETTSSS
T ss_pred             HHHHHHHHHHcCCCCCCceeCCccccc
Confidence            999999999998899999999999975

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=7.6e-43  Score=292.99  Aligned_cols=236  Identities=18%  Similarity=0.280  Sum_probs=193.3

Q ss_pred             CCCcEEEEeCC--CChHHHHHHHHHHHcCCEEEEeeCCC-----------chhHHHHHHhC--C---CceEEecCC----
Q psy12833          2 LKGVVGLVTGG--ASGLGKATVERIVREGGRVVLCDLPT-----------SEGESVAKELG--P---DVKFAPVDV----   59 (254)
Q Consensus         2 l~~~~~lItGa--s~giG~a~a~~l~~~g~~v~~~~r~~-----------~~~~~~~~~~~--~---~~~~~~~Dl----   59 (254)
                      |+||++|||||  ++|||++++++|+++|++|++++|+.           +.+++. +++.  .   .+.++.+|+    
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTTCSS
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhccccccccccccccccccc
Confidence            67999999999  89999999999999999999998753           122222 2221  1   134555443    


Q ss_pred             --------C--------CHHHHHHHHHHHHHHcCCCcEEEeCCccCC--CccccccCCCCcCCHHHHHHHHHHHhHHHHH
Q psy12833         60 --------T--------SEEDVQKAVLLCKDSFGKLDVNVNCAGISC--AFKIFNYNKGTVHSLDDFKRILLVNTVGTFN  121 (254)
Q Consensus        60 --------s--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  121 (254)
                              +        |+++++++++++.+.++++|++|||||...  ..++.+      .+.++|++.+++|+.++++
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~  159 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLE------TSRKGYLAASSNSAYSFVS  159 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGG------CCHHHHHHHHHHHTHHHHH
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCccc------CCHHHHHHHHhhhhHHHHH
Confidence                    3        366899999999999999999999999753  233444      7899999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC-ccchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccc
Q psy12833        122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPL  199 (254)
Q Consensus       122 l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~  199 (254)
                      ++++++|.|.+        .++||++||..+..+.++. ..|++||+|+.+|+++++.|+++ +||+||+|+||+++|++
T Consensus       160 l~~~~~~~m~~--------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  231 (315)
T 2o2s_A          160 LLQHFGPIMNE--------GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRA  231 (315)
T ss_dssp             HHHHHSTTEEE--------EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHH
T ss_pred             HHHHHHHHHhc--------CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchh
Confidence            99999999854        3899999999999988887 58999999999999999999985 89999999999999998


Q ss_pred             cccch--------HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        200 LSMLN--------EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       200 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .....        +...+.+....|. ++..+|||+|+.++||++  +.++||++|.+|||+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          232 ASAIGKSGEKSFIDYAIDYSYNNAPL-RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             HHHTTCSSSSCHHHHHHHHHHHHSSS-CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhccccccchhHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence            64322        2222333445677 899999999999999997  47999999999999875

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-42  Score=281.91  Aligned_cols=236  Identities=29%  Similarity=0.428  Sum_probs=205.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++   +.++.++++|++|+++++++++++.+.++
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999 666666555544   66788999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~  156 (254)
                      ++|++|||||.....++.+      .+.+++++.+++|+.+++++++++++.|. +       .++||++||..+. .+.
T Consensus        99 ~~d~vi~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-------~~~iv~~sS~~~~~~~~  164 (274)
T 1ja9_A           99 GLDFVMSNSGMEVWCDELE------VTQELFDKVFNLNTRGQFFVAQQGLKHCR-R-------GGRIILTSSIAAVMTGI  164 (274)
T ss_dssp             CEEEEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E-------EEEEEEECCGGGTCCSC
T ss_pred             CCCEEEECCCCCCCccccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-------CCEEEEEcChHhccCCC
Confidence            9999999999876554444      78999999999999999999999999886 2       4799999999998 778


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------------cch-HHHHHHHHhcCCCCCCCCC
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------------MLN-EKVRNFLARSIPAPQRLGH  223 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------------~~~-~~~~~~~~~~~~~~~~~~~  223 (254)
                      ++...|+++|++++.+++.++.|+..+||+++.++||+++|++..            ... ++..+.+....|. +++.+
T Consensus       165 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  243 (274)
T 1ja9_A          165 PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGY  243 (274)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-SSCBC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCC-CCccC
Confidence            888999999999999999999999999999999999999999865            222 3334444555666 88999


Q ss_pred             HHHHHHHHHHHhcC--CCcccceEEecCCcc
Q psy12833        224 PDEFAQLVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       224 ~~~va~~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      |+|+|+.+++++++  .+++|+++++|||+.
T Consensus       244 ~~dva~~i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          244 PADIGRAVSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHHhCcccccccCcEEEecCCcC
Confidence            99999999999974  678999999999963

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.3e-42  Score=279.08  Aligned_cols=222  Identities=18%  Similarity=0.239  Sum_probs=187.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++.+|++|+++++++++++.+.   .|++||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSI---PSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSC---CSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhc---CCEEEE
Confidence            68999999999999999999999999999999999999988888888999999999999999999877553   499999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchh
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA  164 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~  164 (254)
                      |||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.       ++||++||..+..+.++...|++
T Consensus        79 ~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~iv~isS~~~~~~~~~~~~Y~a  145 (230)
T 3guy_A           79 SAGSGYFGLLQE------QDPEQIQTLIENNLSSAINVLRELVKRYKDQP-------VNVVMIMSTAAQQPKAQESTYCA  145 (230)
T ss_dssp             CCCCCCCSCGGG------SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-------CEEEEECCGGGTSCCTTCHHHHH
T ss_pred             eCCcCCCCcccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CeEEEEeecccCCCCCCCchhHH
Confidence            999876666655      79999999999999999999999999998764       59999999999999999999999


Q ss_pred             chHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc---CCCcc
Q psy12833        165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT---NPLIN  241 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~---~~~~~  241 (254)
                      ||+|+++|+++++.|++++||+|++++||+++|++.+....        ..+. ++..+|||+|+.++++++   ..+++
T Consensus       146 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~-~~~~~~~dvA~~i~~l~~~~~~~~it  216 (230)
T 3guy_A          146 VKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK--------SLDT-SSFMSAEDAALMIHGALANIGNGYVS  216 (230)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------CCCHHHHHHHHHHHCCEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC--------CCCc-ccCCCHHHHHHHHHHHHhCcCCCCcc
Confidence            99999999999999999999999999999999998754322        2234 788999999999999996   35899


Q ss_pred             cceEEecCCc
Q psy12833        242 GEVIRIDGAL  251 (254)
Q Consensus       242 G~~i~~~gG~  251 (254)
                      |+.+..+...
T Consensus       217 g~~~~~~~~~  226 (230)
T 3guy_A          217 DITVNREGHH  226 (230)
T ss_dssp             EEEEEC----
T ss_pred             ceeecCCCCC
Confidence            9999987654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.5e-41  Score=280.66  Aligned_cols=234  Identities=23%  Similarity=0.306  Sum_probs=200.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++.++.++++|++|+++++++++++.+.++++|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            46899999999999999999999999999999999999999988888888999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++...
T Consensus        83 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~  150 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEE------TTERELRDLFELHVFGPARLTRALLPQMRERG------SGSVVNISSFGGQLSFAGFSA  150 (281)
T ss_dssp             EEECCCCEEECCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTCCCTTCHH
T ss_pred             EEECCCcCCCCChhh------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCEEEEEcCccccCCCCCchH
Confidence            999999865544444      78999999999999999999999999998876      689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-----------hHH--HHHHHHhcCCCCCCCCCHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-----------NEK--VRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-----------~~~--~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      |++||+++++++++++.|++++||++++++||+++|++....           ...  .........+. ++..+|+|+|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva  229 (281)
T 3m1a_A          151 YSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDG-SQPGDPAKAA  229 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC------CBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccC-CCCCCHHHHH
Confidence            999999999999999999999999999999999999985321           111  11222333444 7888999999


Q ss_pred             HHHHHHhcCCCcccceEEecC
Q psy12833        229 QLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       229 ~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      ++++++++++. .|..+.+.+
T Consensus       230 ~a~~~~~~~~~-~~~~~~l~s  249 (281)
T 3m1a_A          230 AAIRLALDTEK-TPLRLALGG  249 (281)
T ss_dssp             HHHHHHHHSSS-CCSEEEESH
T ss_pred             HHHHHHHhCCC-CCeEEecCc
Confidence            99999997653 455666543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.9e-42  Score=288.33  Aligned_cols=236  Identities=19%  Similarity=0.268  Sum_probs=193.0

Q ss_pred             CCCcEEEEeCCC--ChHHHHHHHHHHHcCCEEEEeeCCC-----------chhHHHHHHhCCC-----ceEEecC-----
Q psy12833          2 LKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPT-----------SEGESVAKELGPD-----VKFAPVD-----   58 (254)
Q Consensus         2 l~~~~~lItGas--~giG~a~a~~l~~~g~~v~~~~r~~-----------~~~~~~~~~~~~~-----~~~~~~D-----   58 (254)
                      |+||++|||||+  +|||++++++|+++|++|++++|+.           +.+++. +++...     ...+.+|     
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCCS
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceeccc
Confidence            689999999999  9999999999999999999998642           222222 222110     2333333     


Q ss_pred             ---CC----C--------HHHHHHHHHHHHHHcCCCcEEEeCCccCC--CccccccCCCCcCCHHHHHHHHHHHhHHHHH
Q psy12833         59 ---VT----S--------EEDVQKAVLLCKDSFGKLDVNVNCAGISC--AFKIFNYNKGTVHSLDDFKRILLVNTVGTFN  121 (254)
Q Consensus        59 ---ls----~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  121 (254)
                         ++    |        +++++++++++.+.++++|++|||||+..  ..++.+      .+.++|++.+++|+.++++
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~  158 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLE------TSRKGYLAAISASSYSFVS  158 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGG------CCHHHHHHHHHHHTHHHHH
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCccc------CCHHHHHHHHHHhhhHHHH
Confidence               32    2        66899999999999999999999999753  233344      7899999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC-ccchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccc
Q psy12833        122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPL  199 (254)
Q Consensus       122 l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~  199 (254)
                      ++++++|.|.+        .++||++||..+..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++
T Consensus       159 l~~~~~~~m~~--------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~  230 (297)
T 1d7o_A          159 LLSHFLPIMNP--------GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA  230 (297)
T ss_dssp             HHHHHGGGEEE--------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred             HHHHHHHHhcc--------CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccch
Confidence            99999999854        3799999999999988887 69999999999999999999985 89999999999999998


Q ss_pred             cccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        200 LSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       200 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ....  .++..+.+....|. ++..+|||+|+.++||+++  .+++|++|.+|||+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~  287 (297)
T 1d7o_A          231 AKAIGFIDTMIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             SSCCSHHHHHHHHHHHHSSS-CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhccccHHHHHHhhccCCC-CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcee
Confidence            7653  23333444455676 8899999999999999974  7899999999999875

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=9.2e-42  Score=276.27  Aligned_cols=229  Identities=21%  Similarity=0.291  Sum_probs=204.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-------RVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+.++++.+++   +.++.++++|++|+++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       9999999988877776665   557889999999999999999999


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      .+.++++|++|||||.....++.+      .+.+++++.+++|+.+++++++.++|.|.++.      .++||++||..+
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~  148 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSD------LTEEDFDYTMNTNLKGTFFLTQALFALMERQH------SGHIFFITSVAA  148 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGG
T ss_pred             HHhCCCCCEEEEcCCcCCcCcccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC------CCEEEEEecchh
Confidence            999999999999999876555555      78999999999999999999999999998765      689999999999


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      ..+.++...|+++|+++++|+++++.|+.++||++++++||+++|++.......         .. .+..+|+|+|+.++
T Consensus       149 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---------~~-~~~~~~~dva~~~~  218 (244)
T 2bd0_A          149 TKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE---------MQ-ALMMMPEDIAAPVV  218 (244)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST---------TG-GGSBCHHHHHHHHH
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcccc---------cc-ccCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999987543211         01 46789999999999


Q ss_pred             HHhcC--CCcccceEEecCCccc
Q psy12833        233 SIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++++  .+++|+++..+||..+
T Consensus       219 ~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          219 QAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHhCCccccchheEEecccccc
Confidence            99973  6899999999999875

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.3e-42  Score=281.04  Aligned_cols=222  Identities=15%  Similarity=0.144  Sum_probs=191.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GK   78 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~   78 (254)
                      |.++|++|||||++|||++++++|+++|++|++++|+.+..+       ....++++|++|+++++++++++.+.+  ++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            467899999999999999999999999999999999876543       135678999999999999999999999  79


Q ss_pred             CcEEEeCCccCCCccc-cccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISCAFKI-FNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||.....++ .+      .+.++|++.+++|+.+++.+++++.|.|.+        .++||++||..+..+.+
T Consensus        77 iD~lv~~Ag~~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~  142 (241)
T 1dhr_A           77 VDAILCVAGGWAGGNAKSK------SLFKNCDLMWKQSIWTSTISSHLATKHLKE--------GGLLTLAGAKAALDGTP  142 (241)
T ss_dssp             EEEEEECCCCCCCBCTTCT------THHHHHHHHHHHHHHHHHHHHHHHHHHEEE--------EEEEEEECCGGGGSCCT
T ss_pred             CCEEEEcccccCCCCCccc------CCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--------CCEEEEECCHHHccCCC
Confidence            9999999998654443 33      688999999999999999999999999854        47999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhc--cCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      +...|+++|+++++|+++++.|++  ++||+||+++||+++|++.....+        ..+. .+..+|+|+|+.+++++
T Consensus       143 ~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~-~~~~~~~~vA~~v~~l~  213 (241)
T 1dhr_A          143 GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP--------EADF-SSWTPLEFLVETFHDWI  213 (241)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST--------TSCG-GGSEEHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc--------chhh-ccCCCHHHHHHHHHHHh
Confidence            999999999999999999999999  899999999999999987542110        0111 44578999999999999


Q ss_pred             cC--CCcccceEEecCCcc
Q psy12833        236 TN--PLINGEVIRIDGALR  252 (254)
Q Consensus       236 ~~--~~~~G~~i~~~gG~~  252 (254)
                      ++  .+++|+.+.+|||..
T Consensus       214 ~~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          214 TGNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             TTTTCCCTTCEEEEEEETT
T ss_pred             cCCCcCccceEEEEeCCCC
Confidence            74  689999999999864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.8e-42  Score=311.23  Aligned_cols=227  Identities=26%  Similarity=0.347  Sum_probs=192.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC---------chhHHHHHHhCC-CceEEecCCCCHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT---------SEGESVAKELGP-DVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.         +.++++.+++.. ... ..+|++|.+++++++++
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIVET   84 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHHHH
Confidence            5789999999999999999999999999999998765         566666665511 112 23688888889999999


Q ss_pred             HHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         72 CKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      +.+.+|++|++|||||+....++.+      ++.++|++.+++|+.++++++|+++|+|.++.      .|+||++||.+
T Consensus        85 ~~~~~G~iDiLVnNAGi~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~------~G~IVnisS~a  152 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGILRDASMKK------MTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK------YGRIVNTSSPA  152 (604)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CCEEEEECCHH
Confidence            9999999999999999876555555      89999999999999999999999999998876      69999999999


Q ss_pred             cccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        152 AYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       152 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      +..+.++...|++||+|+.+|+++|+.|++++||+||+|+|| ++|++.....++   ..       ....+|||+|..+
T Consensus       153 g~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~---~~-------~~~~~pe~vA~~v  221 (604)
T 2et6_A          153 GLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPP---PM-------LEKLGPEKVAPLV  221 (604)
T ss_dssp             HHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCH---HH-------HTTCSHHHHHHHH
T ss_pred             HcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCCh---hh-------hccCCHHHHHHHH
Confidence            999999999999999999999999999999999999999998 688875432111   01       1235899999999


Q ss_pred             HHHhcC-CCcccceEEecCCcc
Q psy12833        232 QSIITN-PLINGEVIRIDGALR  252 (254)
Q Consensus       232 ~~l~~~-~~~~G~~i~~~gG~~  252 (254)
                      +||+++ .++||+++.+|||+.
T Consensus       222 ~~L~s~~~~itG~~~~vdgG~~  243 (604)
T 2et6_A          222 LYLSSAENELTGQFFEVAAGFY  243 (604)
T ss_dssp             HHHTSSSCCCCSCEEEEETTEE
T ss_pred             HHHhCCcccCCCCEEEECCCeE
Confidence            999974 789999999999974

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=9.8e-43  Score=292.83  Aligned_cols=237  Identities=19%  Similarity=0.268  Sum_probs=162.2

Q ss_pred             CCCcEEEEeCC--CChHHHHHHHHHHHcCCEEEEeeCCC-----------chhH-----------HHHHHhCC------C
Q psy12833          2 LKGVVGLVTGG--ASGLGKATVERIVREGGRVVLCDLPT-----------SEGE-----------SVAKELGP------D   51 (254)
Q Consensus         2 l~~~~~lItGa--s~giG~a~a~~l~~~g~~v~~~~r~~-----------~~~~-----------~~~~~~~~------~   51 (254)
                      |+||++|||||  ++|||++++++|+++|++|++++|+.           +.++           +..+++..      .
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            57899999999  89999999999999999999998642           2221           11222211      1


Q ss_pred             ceEEecC------------CCC--------HHHHHHHHHHHHHHcCCCcEEEeCCccCC--CccccccCCCCcCCHHHHH
Q psy12833         52 VKFAPVD------------VTS--------EEDVQKAVLLCKDSFGKLDVNVNCAGISC--AFKIFNYNKGTVHSLDDFK  109 (254)
Q Consensus        52 ~~~~~~D------------ls~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~  109 (254)
                      ..++.+|            ++|        +++++++++++.+.++++|++|||||...  ..++.+      .+.++|+
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~------~~~~~~~  160 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQ------TSRKGYL  160 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGG------CCHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCcccc------CCHHHHH
Confidence            3444443            232        45899999999999999999999999753  334444      7999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC-ccchhchHHHHHhHHHHHHHhcc-CCcEE
Q psy12833        110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMTLPMARDLAG-AGIRV  187 (254)
Q Consensus       110 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~~i~v  187 (254)
                      +.+++|+.++++++++++|.|.+        .++||++||..+..+.++. ..|++||+|+.+|+++++.|+++ +||+|
T Consensus       161 ~~~~vN~~g~~~l~~~~~~~m~~--------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrv  232 (319)
T 2ptg_A          161 AAVSSSSYSFVSLLQHFLPLMKE--------GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRV  232 (319)
T ss_dssp             HHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEE
T ss_pred             HHHhHhhHHHHHHHHHHHHHHhc--------CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeE
Confidence            99999999999999999999854        3899999999999888887 68999999999999999999985 89999


Q ss_pred             EEEecCCccccccccchH--------HHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        188 NTIAPGLFDTPLLSMLNE--------KVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       188 ~~v~Pg~~~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+|+||+++|++......        ...+.+....|. ++..+|||+|+.++||+++  .++||++|.+|||+++
T Consensus       233 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  307 (319)
T 2ptg_A          233 NCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPL-QKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHA  307 (319)
T ss_dssp             EEEEECCCC--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTT
T ss_pred             EEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCcee
Confidence            999999999998754321        011112234566 8899999999999999974  7999999999999875

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.6e-41  Score=281.01  Aligned_cols=224  Identities=27%  Similarity=0.368  Sum_probs=192.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++|+++++++++++.+.+++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999999998888877765   568899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.+++++.+++|+.++++++++++|.|.+++.     .++||++||..+..+.++
T Consensus       109 id~lvnnAg~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~  177 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQ------MNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT-----GGHIAFTASFAGLVPNAG  177 (301)
T ss_dssp             CSEEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-----CEEEEEECCGGGTSCCTT
T ss_pred             CCEEEECCCcCCCCCccc------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC-----CcEEEEeCchhhcCCCCC
Confidence            999999999886666655      799999999999999999999999999987641     479999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHH----------HHHHhcCCCCCCCCCHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR----------NFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~va  228 (254)
                      ...|++||+|+++|+++++.|+++.||+|++|+||+++|++.........          ..+.. .+......+|||+|
T Consensus       178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pedvA  256 (301)
T 3tjr_A          178 LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGP-LPTQDESVSADDVA  256 (301)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------------CCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccc-cccccCCCCHHHHH
Confidence            99999999999999999999999999999999999999998754321100          00111 11114578999999


Q ss_pred             HHHHHHhcC
Q psy12833        229 QLVQSIITN  237 (254)
Q Consensus       229 ~~~~~l~~~  237 (254)
                      +.++.++..
T Consensus       257 ~~i~~~l~~  265 (301)
T 3tjr_A          257 RLTADAILA  265 (301)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999999963

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=6.8e-42  Score=287.27  Aligned_cols=228  Identities=30%  Similarity=0.344  Sum_probs=194.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee---------CCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCD---------LPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~---------r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |+||++|||||++|||++++++|+++|++|++++         |+.+++++..+++........+|++|.++++++++++
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            5799999999999999999999999999999964         4566666666655222223468999999999999999


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      .+.++++|+||||||+....++.+      .+.++|+..+++|+.++++++++++|.|.++.      .++||++||..+
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------~grIV~vsS~~~  154 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDRSFSR------ISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN------YGRIIMTASASG  154 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------CEEEEEECCHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CCEEEEECChhh
Confidence            999999999999999876555545      78999999999999999999999999998875      689999999999


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      ..+.++...|++||+++.+|+++++.|++++||+||+|+||++ |++.....+..   .       ....+|+|+|..++
T Consensus       155 ~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~---~-------~~~~~p~dvA~~~~  223 (319)
T 1gz6_A          155 IYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPED---L-------VEALKPEYVAPLVL  223 (319)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHH---H-------HHHSCGGGTHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChh---h-------hccCCHHHHHHHHH
Confidence            8888889999999999999999999999999999999999998 77654321110   1       12358999999999


Q ss_pred             HHhcC-CCcccceEEecCCcc
Q psy12833        233 SIITN-PLINGEVIRIDGALR  252 (254)
Q Consensus       233 ~l~~~-~~~~G~~i~~~gG~~  252 (254)
                      +++++ .+++|++|.+|||+.
T Consensus       224 ~l~s~~~~~tG~~~~v~GG~~  244 (319)
T 1gz6_A          224 WLCHESCEENGGLFEVGAGWI  244 (319)
T ss_dssp             HHTSTTCCCCSCEEEEETTEE
T ss_pred             HHhCchhhcCCCEEEECCCeE
Confidence            99974 578999999999975

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.2e-41  Score=307.14  Aligned_cols=225  Identities=31%  Similarity=0.434  Sum_probs=188.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.  +++..++   .+.++..+.+|++  ++.+++++++.+.+|+
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSC
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999998632  2333333   3556777888884  5567889999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||+....++.+      ++.++|++.+++|+.++++++|+++|+|.++.      .|+||++||.++..+.++
T Consensus       396 iDiLVnNAGi~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~------~G~IVnisS~ag~~~~~~  463 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAK------MSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ------FGRIINITSTSGIYGNFG  463 (604)
T ss_dssp             CCEEEECCCCCCCBCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCHHHHSCCTT
T ss_pred             CCEEEECCCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CCEEEEECChhhccCCCC
Confidence            999999999876555545      89999999999999999999999999998875      699999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      ...|++||+|+.+|+++|+.|++++||+||+|+||. +|+|.....++   .      . ....+|+|+|..+.||+++ 
T Consensus       464 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~---~------~-~~~~~pe~vA~~v~~L~s~~  532 (604)
T 2et6_A          464 QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE---Q------D-KNLYHADQVAPLLVYLGTDD  532 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch---h------h-ccCCCHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999999999996 99886432111   0      1 3456899999999999974 


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      ..+||++|.+|||+.+
T Consensus       533 ~~itG~~~~vdGG~~~  548 (604)
T 2et6_A          533 VPVTGETFEIGGGWIG  548 (604)
T ss_dssp             CCCCSCEEEEETTEEE
T ss_pred             cCCCCcEEEECCCeeE
Confidence            2299999999999753

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=5.1e-42  Score=290.24  Aligned_cols=241  Identities=14%  Similarity=0.035  Sum_probs=196.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHH-cCCEEEEeeCCCchhH---------------HHHHHhCCCceEEecCCCCHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVR-EGGRVVLCDLPTSEGE---------------SVAKELGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~-~g~~v~~~~r~~~~~~---------------~~~~~~~~~~~~~~~Dls~~~~~~   66 (254)
                      .+|++|||||++|||+++++.|++ +|++|++++|+.+..+               +..++.+.++..+.+|++|+++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            479999999999999999999999 9999999998765432               122344678889999999999999


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCC-------------cccc--------c-------cCCCCcCCHHHHHHHHHHHhHH
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCA-------------FKIF--------N-------YNKGTVHSLDDFKRILLVNTVG  118 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~-------------~~~~--------~-------~~~~~~~~~~~~~~~~~~n~~~  118 (254)
                      ++++++.+.+|++|+||||||....             .++-        +       ..+..+.+.++|++.+++|..+
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            9999999999999999999997421             1110        0       0011447999999999999999


Q ss_pred             HH-HHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC--ccchhchHHHHHhHHHHHHHhccC-CcEEEEEecCC
Q psy12833        119 TF-NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ--VAYSASKSGIVGMTLPMARDLAGA-GIRVNTIAPGL  194 (254)
Q Consensus       119 ~~-~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~-~i~v~~v~Pg~  194 (254)
                      .+ .+++++.+.+....      .|+||++||..+..+.|.+  ..|++||+|+.+++|+||.|++++ |||||+++||.
T Consensus       206 ~~~~~~~~~~~~~m~~~------gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~  279 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLAE------GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKA  279 (405)
T ss_dssp             HHHHHHHHHHHHTCEEE------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHhhhhC------CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCC
Confidence            98 77777765433333      5899999999999998887  999999999999999999999999 99999999999


Q ss_pred             ccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCccc
Q psy12833        195 FDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALRM  253 (254)
Q Consensus       195 ~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~~  253 (254)
                      ++|++.....  +.......+  ++ ++.+.+||+|+.+.+|+++ ++.|+.+.+|++.++
T Consensus       280 i~T~~s~~ip~~p~y~~~l~~--~m-kr~G~~Ed~a~~i~~L~sd-~l~~~~~~~D~~~~~  336 (405)
T 3zu3_A          280 VVSQASSAIPMMPLYLSLLFK--VM-KEKGTHEGCIEQVYSLYKD-SLCGDSPHMDQEGRL  336 (405)
T ss_dssp             CCCHHHHTSTTHHHHHHHHHH--HH-HHHTCCCCHHHHHHHHHHH-TTSSSCCCBCTTSCE
T ss_pred             CcCchhhcCCCCcHHHHHHHH--HH-hcCCCcHHHHHHHHHHHhc-cccCCCCCcCCCcCC
Confidence            9999887653  222222211  45 8899999999999999988 688999999987653

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=9.9e-42  Score=277.82  Aligned_cols=229  Identities=23%  Similarity=0.294  Sum_probs=191.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCc--hhHHHHHHh-CCCceEEecCCCCH-HHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTS--EGESVAKEL-GPDVKFAPVDVTSE-EDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dls~~-~~~~~~~~~~~~~~   76 (254)
                      |++|+++||||++|||++++++|+++|++ |++++|+.+  .++++.+.. +.++.++++|++|+ ++++++++++.+.+
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            68999999999999999999999999996 999999874  334443333 34688999999998 99999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||..              +.+++++.+++|+.++++++++++|.|.++..   ...++||++||..+..+.
T Consensus        83 g~id~lv~~Ag~~--------------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~---~~~g~iv~isS~~~~~~~  145 (254)
T 1sby_A           83 KTVDILINGAGIL--------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG---GPGGIIANICSVTGFNAI  145 (254)
T ss_dssp             SCCCEEEECCCCC--------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT---CCCEEEEEECCGGGTSCC
T ss_pred             CCCCEEEECCccC--------------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcC---CCCCEEEEECchhhccCC
Confidence            9999999999963              34678999999999999999999999976531   013799999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----HHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----EKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      ++...|++||+++++|+++++.++.++||+|++++||+++|++.....     ...........|    ..+|||+|+.+
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dvA~~i  221 (254)
T 1sby_A          146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP----TQTSEQCGQNF  221 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSC----CEEHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCC----CCCHHHHHHHH
Confidence            999999999999999999999999888999999999999999865321     111122222222    34899999999


Q ss_pred             HHHhcCCCcccceEEecCCcc
Q psy12833        232 QSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       232 ~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      +++++ .+.+|+++.+|||+.
T Consensus       222 ~~~~~-~~~~G~~~~v~gG~~  241 (254)
T 1sby_A          222 VKAIE-ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             HHHHH-HCCTTCEEEEETTEE
T ss_pred             HHHHH-cCCCCCEEEEeCCce
Confidence            99997 468999999999963

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1.2e-41  Score=276.89  Aligned_cols=218  Identities=21%  Similarity=0.231  Sum_probs=192.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +|++|||||++|||++++++|+++|++|++++|+.++.+         -..+.+|++|+++++++++++.+.++++|++|
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            689999999999999999999999999999999877543         24688999999999999999999999999999


Q ss_pred             eCCccCCCcc-ccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         84 NCAGISCAFK-IFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        84 ~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      ||||...... +.+      .+.+++++.+++|+.+++++++++.|.|.+        .++||++||..+..+.++...|
T Consensus        93 ~~Ag~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y  158 (251)
T 3orf_A           93 CAAGGWSGGNASSD------EFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--------GGLFVLTGASAALNRTSGMIAY  158 (251)
T ss_dssp             ECCCCCCCBCTTST------THHHHHHHHHHHHHHHHHHHHHHHHHHEEE--------EEEEEEECCGGGGSCCTTBHHH
T ss_pred             ECCccCCCCCcccc------cCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--------CCEEEEEechhhccCCCCCchh
Confidence            9999865543 222      678999999999999999999999999854        4799999999999999999999


Q ss_pred             hhchHHHHHhHHHHHHHhc--cCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC---
Q psy12833        163 SASKSGIVGMTLPMARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN---  237 (254)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~--~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~---  237 (254)
                      +++|+|++.|+++++.|++  ++||+|++++||+++|++.+..        ....+. ++..+|+|+|+.+++++++   
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~-~~~~~~~dva~~i~~l~~~~~~  229 (251)
T 3orf_A          159 GATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY--------MSDANF-DDWTPLSEVAEKLFEWSTNSDS  229 (251)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH--------CTTSCG-GGSBCHHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh--------cccccc-cccCCHHHHHHHHHHHhcCccc
Confidence            9999999999999999987  8999999999999999875321        122344 7888999999999999987   


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      ++++|++|.+++|..+
T Consensus       230 ~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          230 RPTNGSLVKFETKSKV  245 (251)
T ss_dssp             CCCTTCEEEEEEETTE
T ss_pred             cCCcceEEEEecCCcc
Confidence            7999999999987653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-42  Score=276.38  Aligned_cols=221  Identities=16%  Similarity=0.145  Sum_probs=190.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+       ....++++|++|+++++++++++.+.+  +++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            57899999999999999999999999999999999877643       235678999999999999999999998  799


Q ss_pred             cEEEeCCccCCCccc-cccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         80 DVNVNCAGISCAFKI-FNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        80 d~li~~ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      |++|||||.....++ .+      .+.++|++.+++|+.+++++++.+.|.|.+        .++||++||..+..+.++
T Consensus        74 d~lv~~Ag~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~g~iv~isS~~~~~~~~~  139 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSK------DFVKNADLMIKQSVWSSAIAAKLATTHLKP--------GGLLQLTGAAAAMGPTPS  139 (236)
T ss_dssp             EEEEECCCCCCCBCTTST------THHHHHHHHHHHHHHHHHHHHHHHHHHEEE--------EEEEEEECCGGGGSCCTT
T ss_pred             CEEEECCcccCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--------CCEEEEECchhhccCCCC
Confidence            999999998654443 33      678999999999999999999999999854        479999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhc--cCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII-  235 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-  235 (254)
                      ...|+++|+++++|+++++.|++  ++||+|++++||+++|++.....        ...+. .+..+|+|+|+.+++++ 
T Consensus       140 ~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~~~~-~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          140 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM--------PNADH-SSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS--------TTCCG-GGCBCHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcC--------CCccc-cccCCHHHHHHHHHHHHc
Confidence            99999999999999999999998  89999999999999998753211        01111 45678999999998555 


Q ss_pred             c--CCCcccceEEecCCcc
Q psy12833        236 T--NPLINGEVIRIDGALR  252 (254)
Q Consensus       236 ~--~~~~~G~~i~~~gG~~  252 (254)
                      +  ..+++|+.+.+|||..
T Consensus       211 s~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          211 ETSSRPSSGALLKITTENG  229 (236)
T ss_dssp             CGGGCCCTTCEEEEEEETT
T ss_pred             CCCcccccccEEEEecCCC
Confidence            5  4689999999999975

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2.5e-42  Score=294.66  Aligned_cols=244  Identities=14%  Similarity=0.005  Sum_probs=195.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHH-cCCEEEEeeCCCchhH---------------HHHHHhCCCceEEecCCCCHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVR-EGGRVVLCDLPTSEGE---------------SVAKELGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~-~g~~v~~~~r~~~~~~---------------~~~~~~~~~~~~~~~Dls~~~~~~   66 (254)
                      .+|++||||||+|||+++++.|++ +|++|++++|+.+.++               +..++.+.++..+.+|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            479999999999999999999999 9999999999866433               223444778899999999999999


Q ss_pred             HHHHHHHHHc-CCCcEEEeCCccCC-------------Ccccc--------cc-------CCCCcCCHHHHHHHHHHHhH
Q psy12833         67 KAVLLCKDSF-GKLDVNVNCAGISC-------------AFKIF--------NY-------NKGTVHSLDDFKRILLVNTV  117 (254)
Q Consensus        67 ~~~~~~~~~~-~~id~li~~ag~~~-------------~~~~~--------~~-------~~~~~~~~~~~~~~~~~n~~  117 (254)
                      ++++.+.+.+ |++|+||||||...             ..++.        +.       ....+.+.++|++.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 99999999999731             11110        00       00123789999999999999


Q ss_pred             HHH-HHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC--ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCC
Q psy12833        118 GTF-NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ--VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGL  194 (254)
Q Consensus       118 ~~~-~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~  194 (254)
                      +.+ .+++.+.+.+...+      .|+||++||..+..+.|.+  ..|++||+|+.+|+++||.|++++|||||+|+||+
T Consensus       220 ~~~~~~~~a~~~~~m~~~------gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~  293 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLAD------GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKS  293 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEE------EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred             hHHHHHHHHHHHHHHhhC------CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCC
Confidence            987 77887766443333      5899999999999888766  89999999999999999999999999999999999


Q ss_pred             ccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC-Ccc-cceEEecCCccc
Q psy12833        195 FDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP-LIN-GEVIRIDGALRM  253 (254)
Q Consensus       195 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~-~~~-G~~i~~~gG~~~  253 (254)
                      ++|++................|+ ++.+.|||+|+.+.||+++. |.+ |+...+|++..+
T Consensus       294 i~T~~~~~ip~~~~~~~~~~~~m-~r~G~pEdva~~v~~L~sd~ly~~~~~~~~~d~~~~~  353 (422)
T 3s8m_A          294 VVTQASAAIPVMPLYISMVYKIM-KEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQNRL  353 (422)
T ss_dssp             CCCTTGGGSTHHHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHTTTCTTCCCCCCCTTSCE
T ss_pred             CcChhhhcCCCChHHHHHHHhhh-cCCcChHHHHHHHHHHhcchhhccCCCCcccCCCCCC
Confidence            99999876643221111112255 89999999999999999865 665 777768887654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=3.3e-40  Score=265.54  Aligned_cols=225  Identities=27%  Similarity=0.328  Sum_probs=187.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++. ++.++++|++|+++++++++++.+.++++|++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-GALPLPGDVREEGDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-hceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            36899999999999999999999999999999999888877776664 78899999999999999999999999999999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      |||||.....++.+      .+.++|++.+++|+.+++++++.+++.|.++.      .++||++||..+..+.++...|
T Consensus        83 i~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~~Y  150 (234)
T 2ehd_A           83 VNNAGVGVMKPVHE------LTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG------GGTIVNVGSLAGKNPFKGGAAY  150 (234)
T ss_dssp             EECCCCCCCSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT------CEEEEEECCTTTTSCCTTCHHH
T ss_pred             EECCCcCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CcEEEEECCchhcCCCCCCchh
Confidence            99999865555544      78999999999999999999999999998765      6899999999999998899999


Q ss_pred             hhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CCc
Q psy12833        163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLI  240 (254)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~~  240 (254)
                      +++|++++.++++++.|++++||++++++||+++|++.....+.    +       . ..+|+|+|+.+++++++  .++
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~-------~-~~~~~dvA~~~~~l~~~~~~~~  218 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPGQ----A-------W-KLKPEDVAQAVLFALEMPGHAM  218 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------CCHHHHHHHHHHHHHSCCSSC
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccccc----c-------C-CCCHHHHHHHHHHHhCCCcccc
Confidence            99999999999999999999999999999999999876432110    0       1 36999999999999974  588


Q ss_pred             ccceEEecCCcc
Q psy12833        241 NGEVIRIDGALR  252 (254)
Q Consensus       241 ~G~~i~~~gG~~  252 (254)
                      +|+++..+++..
T Consensus       219 ~g~~~~~~~~~~  230 (234)
T 2ehd_A          219 VSEIELRPTRPT  230 (234)
T ss_dssp             CCEEECCC----
T ss_pred             cceEEEeecCCC
Confidence            999876666543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-40  Score=268.27  Aligned_cols=228  Identities=18%  Similarity=0.166  Sum_probs=187.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC--
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG--   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--   77 (254)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+.++++.+..+.++.++++|++|+++++++++++.+.++  
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999  9999999998877765432256789999999999999999999999998  


Q ss_pred             CCcEEEeCCccCC-CccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCC-----CCCCcEEEEEeccc
Q psy12833         78 KLDVNVNCAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNE-----DGLRGVIINTASIA  151 (254)
Q Consensus        78 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~ii~vss~~  151 (254)
                      ++|++|||||... ..++.+      .+.+++++.+++|+.+++.+++++++.|.++....     ....++||++||..
T Consensus        81 ~id~li~~Ag~~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  154 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTE------PNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSC------CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             CCcEEEECCcccCCCccccc------CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCc
Confidence            9999999999865 333333      78999999999999999999999999997751110     11147999999999


Q ss_pred             cccCC-------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCH
Q psy12833        152 AYEGQ-------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHP  224 (254)
Q Consensus       152 ~~~~~-------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (254)
                      +..+.       ++...|+++|++++.++++++.|+.++||++++++||+++|++...                ....+|
T Consensus       155 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------~~~~~~  218 (250)
T 1yo6_A          155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------NAALTV  218 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------
T ss_pred             cccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------CCCCCH
Confidence            88776       5778999999999999999999999999999999999999987532                234689


Q ss_pred             HHHHHHHHHHhcC--CCcccceEEecCCc
Q psy12833        225 DEFAQLVQSIITN--PLINGEVIRIDGAL  251 (254)
Q Consensus       225 ~~va~~~~~l~~~--~~~~G~~i~~~gG~  251 (254)
                      +|+|+.+++++++  .+++|+++.+|||.
T Consensus       219 ~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          219 EQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            9999999999974  46899999999985

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-40  Score=272.78  Aligned_cols=237  Identities=24%  Similarity=0.331  Sum_probs=193.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---C--CCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---G--PDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +  .++.++++|++|+++++++++++.+.+
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999988777766554   2  457889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc--c
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY--E  154 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~--~  154 (254)
                      +++|++|||||.....++.+      .+.++|++.+++|+.+++.+++.+++.|.++..    ..++||++||..+.  .
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~----~~g~iv~isS~~~~~~~  179 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLS------GSTSGWKDMFNVNVLALSICTREAYQSMKERNV----DDGHIININSMSGHRVL  179 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CSCEEEEECCGGGTSCC
T ss_pred             CCCCEEEECCCCCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CCceEEEEcChhhcccC
Confidence            99999999999865544444      789999999999999999999999999987641    02799999999988  5


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhc--cCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      +.++...|+++|++++.|++.++.|+.  ..||++++|+||+++|++.........+......+. .+..+|+|+|+.++
T Consensus       180 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~i~  258 (279)
T 1xg5_A          180 PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQ-MKCLKPEDVAEAVI  258 (279)
T ss_dssp             SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC----CBCHHHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhccc-ccCCCHHHHHHHHH
Confidence            667788999999999999999999998  889999999999999998422111001111222233 67889999999999


Q ss_pred             HHhcC-C-CcccceEEecCC
Q psy12833        233 SIITN-P-LINGEVIRIDGA  250 (254)
Q Consensus       233 ~l~~~-~-~~~G~~i~~~gG  250 (254)
                      +++++ . +.+| .+.++++
T Consensus       259 ~l~~~~~~~~~g-~i~i~~~  277 (279)
T 1xg5_A          259 YVLSTPAHIQIG-DIQMRPT  277 (279)
T ss_dssp             HHHHSCTTEEEE-EEEEEET
T ss_pred             HHhcCCcceEee-eEEEccC
Confidence            99974 3 4455 4555543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=6.2e-40  Score=275.56  Aligned_cols=230  Identities=24%  Similarity=0.320  Sum_probs=186.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CC--CceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GP--DVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~--~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.  ++.++++|++|+++++++++++.+.+
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999998888777665   33  78899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||+....++.+      .+.+++++.+++|+.+++++++.++|.|.++........++||++||.++..+.
T Consensus        86 g~id~lv~nAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~  159 (319)
T 3ioy_A           86 GPVSILCNNAGVNLFQPIEE------SSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA  159 (319)
T ss_dssp             CCEEEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC
T ss_pred             CCCCEEEECCCcCCCCCccc------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC
Confidence            99999999999876666655      799999999999999999999999999987511111126899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHH---HHH--------HHhcCCCCCCCCCHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV---RNF--------LARSIPAPQRLGHPD  225 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~  225 (254)
                      ++...|++||+|+++|+++++.|+.+.||+|++|+||+++|++........   ...        .....+......+|+
T Consensus       160 ~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  239 (319)
T 3ioy_A          160 GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPD  239 (319)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHH
Confidence            999999999999999999999999999999999999999999875432110   000        000001101227999


Q ss_pred             HHHHHHHHHhcC
Q psy12833        226 EFAQLVQSIITN  237 (254)
Q Consensus       226 ~va~~~~~l~~~  237 (254)
                      ++|+.++.++..
T Consensus       240 ~vA~~~~~al~~  251 (319)
T 3ioy_A          240 VIGARVIEAMKA  251 (319)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHc
Confidence            999999999864

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=6.8e-41  Score=303.18  Aligned_cols=228  Identities=26%  Similarity=0.328  Sum_probs=181.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC---------CCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL---------PTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      ++||++|||||++|||+++|++|+++|++|++++|         +.+.+++..+++........+|++|.++++++++++
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence            68999999999999999999999999999999988         666777777666322223458999999999999999


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      .+.++++|++|||||+....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||.++
T Consensus        97 ~~~~g~iDiLVnnAGi~~~~~~~~------~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~------~g~IV~isS~a~  164 (613)
T 3oml_A           97 IKAFGRVDILVNNAGILRDRSLVK------TSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN------YGRIIMTSSNSG  164 (613)
T ss_dssp             --------CEECCCCCCCCCCSTT------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT------CEEEEEECCHHH
T ss_pred             HHHCCCCcEEEECCCCCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------CCEEEEECCHHH
Confidence            999999999999999876655555      89999999999999999999999999999876      699999999999


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      ..+.++...|++||+|+.+|+++++.|++++||+||+|+||.+ |++.....+..   .       .+..+|+|+|..++
T Consensus       165 ~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~---~-------~~~~~pedvA~~v~  233 (613)
T 3oml_A          165 IYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDI---L-------FNELKPKLIAPVVA  233 (613)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHH---H-------HTTCCGGGTHHHHH
T ss_pred             cCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchh---h-------hhcCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999975 55544322111   1       23358999999999


Q ss_pred             HHhcC-CCcccceEEecCCcc
Q psy12833        233 SIITN-PLINGEVIRIDGALR  252 (254)
Q Consensus       233 ~l~~~-~~~~G~~i~~~gG~~  252 (254)
                      ||+++ .++||++|.+|||++
T Consensus       234 ~L~s~~~~~tG~~i~vdGG~~  254 (613)
T 3oml_A          234 YLCHESCEDNGSYIESAAGWA  254 (613)
T ss_dssp             HTTSTTCCCCSCEEEEETTEE
T ss_pred             HhcCCCcCCCceEEEECCCeE
Confidence            99975 689999999999976

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=2.8e-41  Score=275.51  Aligned_cols=216  Identities=24%  Similarity=0.349  Sum_probs=172.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++|||||++|||++++++|+++|++|++++|+.++++.         . +++|++|+++++++++++   .+++|++||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv~   68 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------D-LSTAEGRKQAIADVLAKC---SKGMDGLVL   68 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------C-TTSHHHHHHHHHHHHTTC---TTCCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------c-cccCCCCHHHHHHHHHHh---CCCCCEEEE
Confidence            689999999999999999999999999999998766432         1 679999999999888743   378999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-----------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-----------  153 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-----------  153 (254)
                      |||....             .+.+++.+++|+.++++++++++|.|.++.      .++||++||..+.           
T Consensus        69 ~Ag~~~~-------------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~~~~  129 (257)
T 1fjh_A           69 CAGLGPQ-------------TKVLGNVVSVNYFGATELMDAFLPALKKGH------QPAAVVISSVASAHLAFDKNPLAL  129 (257)
T ss_dssp             CCCCCTT-------------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS------SCEEEEECCGGGGSSCGGGCTTHH
T ss_pred             CCCCCCC-------------cccHHHHHHHhhHHHHHHHHHHHHHHhhcC------CcEEEEECChhhhccccccchhhh
Confidence            9997531             123889999999999999999999998765      6899999999988           


Q ss_pred             -----------------cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHh--
Q psy12833        154 -----------------EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLAR--  213 (254)
Q Consensus       154 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~--  213 (254)
                                       .+.++...|++||++++.+++.++.|++++||+|++++||+++|++.... .+........  
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~  209 (257)
T 1fjh_A          130 ALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF  209 (257)
T ss_dssp             HHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------C
T ss_pred             hhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhc
Confidence                             34456789999999999999999999999999999999999999987654 2222222222  


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        214 SIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       214 ~~~~~~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ..|. ++..+|+|+|+.+++++++  .+++|+.+.+|||+++
T Consensus       210 ~~~~-~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          210 VPPM-GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CCST-TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             cccc-CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            3455 7889999999999999975  4899999999999753

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.7e-40  Score=276.10  Aligned_cols=235  Identities=20%  Similarity=0.262  Sum_probs=183.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-----chhHHHHH---HhCCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-----SEGESVAK---ELGPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-----~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      |++|++|||||++|||++++++|+++|++|++++|+.     +.++++.+   +.+.++.++++|++|+++++++++++.
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            6789999999999999999999999999999988863     33343333   236789999999999999999999999


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                      +.+|++|++|||||+....++.+      .+.++|++.+++|+.++++++++++|.|.+++      .++||++||..+.
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~------~g~iV~isS~~~~  150 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEA------FTPEQFAELYDINVLSTQRVNRAALPHMRRQK------HGLLIWISSSSSA  150 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGT
T ss_pred             HHcCCCCEEEECCCcCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCEEEEEecchhc
Confidence            99999999999999876665555      79999999999999999999999999999876      7999999999988


Q ss_pred             c-CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHH------------HHHHhc
Q psy12833        154 E-GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVR------------NFLARS  214 (254)
Q Consensus       154 ~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~------------~~~~~~  214 (254)
                      . +.++...|++||+|+++|+++++.|++++||+|++|+||+++|++....      .....            +.+.+.
T Consensus       151 ~~~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (324)
T 3u9l_A          151 GGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKA  230 (324)
T ss_dssp             SCCCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHH
T ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHH
Confidence            5 4566788999999999999999999999999999999999987653210      00000            111110


Q ss_pred             C-CCCCCCCCHHHHHHHHHHHhcCCC-cccceEEec
Q psy12833        215 I-PAPQRLGHPDEFAQLVQSIITNPL-INGEVIRID  248 (254)
Q Consensus       215 ~-~~~~~~~~~~~va~~~~~l~~~~~-~~G~~i~~~  248 (254)
                      . .......+|+++|++++.++..+. .....+.+.
T Consensus       231 ~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~g  266 (324)
T 3u9l_A          231 FAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVD  266 (324)
T ss_dssp             HHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEEC
T ss_pred             HHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeC
Confidence            0 000223689999999999997542 234455553

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=8.9e-39  Score=262.06  Aligned_cols=228  Identities=21%  Similarity=0.190  Sum_probs=194.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC---CEEEEeeCCCchhHHHHH--HhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG---GRVVLCDLPTSEGESVAK--ELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g---~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+.+  +.+.++.++.+|++|+++++++++++.+.+
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            578999999999999999999999999   999999999876654422  125689999999999999999999999999


Q ss_pred             C--CCcEEEeCCccCC-CccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC-----CCCCCcEEEEEe
Q psy12833         77 G--KLDVNVNCAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLN-----EDGLRGVIINTA  148 (254)
Q Consensus        77 ~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~ii~vs  148 (254)
                      +  ++|++|||||... ..++.+      .+.+++++.+++|+.+++++++.+++.|.++...     .....++||++|
T Consensus        99 g~~~id~li~~Ag~~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  172 (267)
T 1sny_A           99 KDQGLNVLFNNAGIAPKSARITA------VRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  172 (267)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             CCCCccEEEECCCcCCCcccccc------CCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEe
Confidence            8  8999999999875 444444      7899999999999999999999999999875100     000137999999


Q ss_pred             ccccccCCC---CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHH
Q psy12833        149 SIAAYEGQS---GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       149 s~~~~~~~~---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (254)
                      |..+..+.+   +...|+++|++++.|++.++.|+.++||++++++||+++|++...                ....+|+
T Consensus       173 S~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------~~~~~~~  236 (267)
T 1sny_A          173 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------SAPLDVP  236 (267)
T ss_dssp             CGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------------TCSBCHH
T ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------------CCCCCHH
Confidence            999887653   677899999999999999999999999999999999999998632                3456899


Q ss_pred             HHHHHHHHHhc--CCCcccceEEecCCc
Q psy12833        226 EFAQLVQSIIT--NPLINGEVIRIDGAL  251 (254)
Q Consensus       226 ~va~~~~~l~~--~~~~~G~~i~~~gG~  251 (254)
                      ++|+.++++++  ...++|+++.+|||.
T Consensus       237 ~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          237 TSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            99999999996  467899999999986

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.1e-40  Score=268.59  Aligned_cols=224  Identities=22%  Similarity=0.288  Sum_probs=164.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||++|||++++++|++ |++|++++|+.+.+++..+  ..++.++.+|+++.++ .+.+.+..+.++++|+
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~   78 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE--IEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDT   78 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT--STTEEEEECCHHHHHH-TSSSCGGGTTCSCCSE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh--hcCCcceecccchHHH-HHHHHHHHHhcCCCCE
Confidence            6799999999999999999999988 9999999999888777655  3568899999998877 5555556667789999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.+++++++.++|.|.++       .++||++||..+..+.++...
T Consensus        79 lv~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  145 (245)
T 3e9n_A           79 LVHAAAVARDTTIEA------GSVAEWHAHLDLNVIVPAELSRQLLPALRAA-------SGCVIYINSGAGNGPHPGNTI  145 (245)
T ss_dssp             EEECC----------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEEC----------CHH
T ss_pred             EEECCCcCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-------CCeEEEEcCcccccCCCCchH
Confidence            999999876655544      7889999999999999999999999999876       489999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcc
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN  241 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  241 (254)
                      |++||+|+++|+++++.|++++||+|++++||+++|++.....+...    ...+. ++..+|+|+|+.++++++.+. +
T Consensus       146 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~----~~~~~-~~~~~p~dvA~~i~~l~~~~~-~  219 (245)
T 3e9n_A          146 YAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG----TNFRP-EIYIEPKEIANAIRFVIDAGE-T  219 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CC-GGGSCHHHHHHHHHHHHTSCT-T
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhh----ccccc-ccCCCHHHHHHHHHHHHcCCC-c
Confidence            99999999999999999999999999999999999998765433222    22344 778899999999999998653 5


Q ss_pred             cceEEec
Q psy12833        242 GEVIRID  248 (254)
Q Consensus       242 G~~i~~~  248 (254)
                      ++++++|
T Consensus       220 ~~~~~i~  226 (245)
T 3e9n_A          220 TQITNVD  226 (245)
T ss_dssp             EEEEEEE
T ss_pred             cceeeeE
Confidence            6666654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=7.3e-40  Score=281.55  Aligned_cols=242  Identities=16%  Similarity=0.087  Sum_probs=196.3

Q ss_pred             CCCcEEEEeCCCChHHHH--HHHHHHHcCCEEEEeeCCCchh------------HH---HHHHhCCCceEEecCCCCHHH
Q psy12833          2 LKGVVGLVTGGASGLGKA--TVERIVREGGRVVLCDLPTSEG------------ES---VAKELGPDVKFAPVDVTSEED   64 (254)
Q Consensus         2 l~~~~~lItGas~giG~a--~a~~l~~~g~~v~~~~r~~~~~------------~~---~~~~~~~~~~~~~~Dls~~~~   64 (254)
                      ..||++|||||++|||++  +++.|+++|++|++++|+....            +.   ..++.+.++.+++||++|+++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            358999999999999999  9999999999999999975432            22   233446788999999999999


Q ss_pred             HHHHHHHHHHHcCCCcEEEeCCccCC-------------Cccccc---------------cCCCCcCCHHHHHHHHHHHh
Q psy12833         65 VQKAVLLCKDSFGKLDVNVNCAGISC-------------AFKIFN---------------YNKGTVHSLDDFKRILLVNT  116 (254)
Q Consensus        65 ~~~~~~~~~~~~~~id~li~~ag~~~-------------~~~~~~---------------~~~~~~~~~~~~~~~~~~n~  116 (254)
                      ++++++++.+.+|++|++|||||...             ..++..               .......+.++|+..+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            99999999999999999999999741             111100               00112368999999999999


Q ss_pred             HHHH-HHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC--ccchhchHHHHHhHHHHHHHhcc-CCcEEEEEec
Q psy12833        117 VGTF-NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ--VAYSASKSGIVGMTLPMARDLAG-AGIRVNTIAP  192 (254)
Q Consensus       117 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~P  192 (254)
                      .+.+ .+++.+.+.+...+      .++||++||..+..+.|.+  ..|++||+|+.+|+++|+.|+++ +||+||+++|
T Consensus       218 ~~~~~~~~~~l~~~~~~~~------gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~P  291 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSD------KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVN  291 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEE------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhhhcC------CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEEC
Confidence            9888 77777766544443      5899999999999998888  99999999999999999999999 9999999999


Q ss_pred             CCccccccccchH--HHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        193 GLFDTPLLSMLNE--KVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       193 g~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      |.++|++......  .......+  ++ ++.+.+|++++.+.+|+++...+|+.+.+|||..
T Consensus       292 G~v~T~~s~~ip~~p~y~~~~~~--~m-k~~G~~E~v~e~~~~L~sd~~~~g~~~~~D~~~~  350 (418)
T 4eue_A          292 KALVTKASAYIPTFPLYAAILYK--VM-KEKNIHENCIMQIERMFSEKIYSNEKIQFDDKGR  350 (418)
T ss_dssp             CCCCCHHHHTSTTHHHHHHHHHH--HH-HHTTCCCCHHHHHHHHHHHTTSSSSCCCCCTTSC
T ss_pred             CcCcChhhhcCCCCcHHHHHHHH--HH-hhcCChHHHHHHHHHHhhccccCCCccccCCCce
Confidence            9999998876532  11111111  23 6778999999999999999888999999998654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-38  Score=261.87  Aligned_cols=213  Identities=23%  Similarity=0.331  Sum_probs=188.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+++
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            57899999999999999999999999999999999988777766554   567899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.+++++.+++|+.+++++++.++|.|.++.      .++||++||..+..+.++
T Consensus       109 iD~li~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~  176 (272)
T 1yb1_A          109 VSILVNNAGVVYTSDLFA------TQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN------HGHIVTVASAAGHVSVPF  176 (272)
T ss_dssp             CSEEEECCCCCCCCCCGG------GHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCCC-CCCHHH
T ss_pred             CcEEEECCCcCCCcchhh------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CCEEEEEechhhcCCCCC
Confidence            999999999876554444      67899999999999999999999999998775      689999999999988888


Q ss_pred             CccchhchHHHHHhHHHHHHHhc---cCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLA---GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ...|+++|++++.++++++.|+.   +.||++++++||+++|++.....          .+. ++..+|+|+|+.+++++
T Consensus       177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~~-~~~~~~~dva~~i~~~~  245 (272)
T 1yb1_A          177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS----------TSL-GPTLEPEEVVNRLMHGI  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH----------HHH-CCCCCHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccccc----------ccc-cCCCCHHHHHHHHHHHH
Confidence            88999999999999999999997   67999999999999999864311          112 66789999999999999


Q ss_pred             cC
Q psy12833        236 TN  237 (254)
Q Consensus       236 ~~  237 (254)
                      ..
T Consensus       246 ~~  247 (272)
T 1yb1_A          246 LT  247 (272)
T ss_dssp             HT
T ss_pred             Hc
Confidence            64

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-38  Score=264.03  Aligned_cols=221  Identities=24%  Similarity=0.244  Sum_probs=183.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCH-HHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSE-EDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~-~~~~~~~~~~~~~   75 (254)
                      |+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++    +.++.++++|++|+ ++++++++.+.+.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999998888777766    35789999999998 9999999999999


Q ss_pred             cCCCcEEEeCCccCCCccc------------------------cccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy12833         76 FGKLDVNVNCAGISCAFKI------------------------FNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIH  131 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  131 (254)
                      ++++|++|||||+......                        .......+.+.+++++.+++|+.+++++++.++|.|.
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            9999999999998643210                        0111233368999999999999999999999999998


Q ss_pred             hccCCCCCCCcEEEEEeccccccCC-------------------------------------------CCCccchhchHH
Q psy12833        132 ENKLNEDGLRGVIINTASIAAYEGQ-------------------------------------------SGQVAYSASKSG  168 (254)
Q Consensus       132 ~~~~~~~~~~~~ii~vss~~~~~~~-------------------------------------------~~~~~Y~~sK~a  168 (254)
                      +++      .++||++||..+..+.                                           ++...|++||+|
T Consensus       169 ~~~------~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a  242 (311)
T 3o26_A          169 LSD------SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKAC  242 (311)
T ss_dssp             TSS------SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHH
T ss_pred             cCC------CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHH
Confidence            776      6899999999887543                                           355789999999


Q ss_pred             HHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC--CCcccceE
Q psy12833        169 IVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVI  245 (254)
Q Consensus       169 ~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~--~~~~G~~i  245 (254)
                      +++|+++++.|+.+  |+|++|+||+++|++...                ....++++.|+.++.++..  +..+|..+
T Consensus       243 ~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~----------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          243 LNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYG----------------IGNYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTT----------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHHHHHHHhhcCC--ceEEEecCCceecCCcCC----------------CCCCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            99999999999964  999999999999998643                2235899999999999863  23344444

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=2.5e-38  Score=260.02  Aligned_cols=218  Identities=25%  Similarity=0.321  Sum_probs=186.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHH-cCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVR-EGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+++|++|||||++|||++++++|++ +|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         1 ~~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             -CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            56899999999999999999999999 9999999999988777766655   5678999999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCC-HHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHS-LDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||||...... ..      .+ .++++..+++|+.+++++++.+++.|.+        .++||++||..+..+
T Consensus        81 g~id~li~~Ag~~~~~~-~~------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--------~g~iv~~sS~~~~~~  145 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVA-DP------TPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--------QGRVVNVSSIMSVRA  145 (276)
T ss_dssp             SSEEEEEECCCCCCCTT-CC------SCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEECCHHHHHH
T ss_pred             CCCCEEEECCcccccCC-Cc------cccHHHHHhhhheeeeeHHHHHHHHHHhhCC--------CCEEEEECChhhhcc
Confidence            99999999999764322 11      34 5899999999999999999999998754        379999999877632


Q ss_pred             -----------------------------------------CCCCccchhchHHHHHhHHHHHHHhcc----CCcEEEEE
Q psy12833        156 -----------------------------------------QSGQVAYSASKSGIVGMTLPMARDLAG----AGIRVNTI  190 (254)
Q Consensus       156 -----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~v  190 (254)
                                                               ..+...|+++|++++.|++.++.++.+    .||+++++
T Consensus       146 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v  225 (276)
T 1wma_A          146 LKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNAC  225 (276)
T ss_dssp             HHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEE
T ss_pred             cccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEe
Confidence                                                     012378999999999999999999988    79999999


Q ss_pred             ecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC----CCcccceEEecCC
Q psy12833        191 APGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN----PLINGEVIRIDGA  250 (254)
Q Consensus       191 ~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~----~~~~G~~i~~~gG  250 (254)
                      +||+++|++...                .+..+|+|+|+.++++++.    .+++|++|. +|+
T Consensus       226 ~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          226 CPGWVRTDMAGP----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             ECCSBCSTTTCT----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             cCCccccCcCCc----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            999999998642                3467999999999999973    378999988 554

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2.4e-38  Score=266.76  Aligned_cols=228  Identities=19%  Similarity=0.191  Sum_probs=182.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHH---HHHh------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESV---AKEL------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~---~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      ++|++|||||++|||++++++|+++|++|++++|+...+++.   .++.      +.++.++++|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            479999999999999999999999999998888765544332   2222      3578999999999999999999883


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                        ++++|++|||||.....++.+      .+.++|++.+++|+.++++++++++|.|.++.      .++||++||..+.
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~------~g~IV~isS~~~~  146 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEA------LGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG------SGRVLVTGSVGGL  146 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEEEEGGGT
T ss_pred             --cCCCCEEEECCCcCCCCchhh------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------CCEEEEECCcccc
Confidence              479999999999875555555      78999999999999999999999999998765      6899999999999


Q ss_pred             cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----------HHHHHHHHhc-----CCC
Q psy12833        154 EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----------EKVRNFLARS-----IPA  217 (254)
Q Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----------~~~~~~~~~~-----~~~  217 (254)
                      .+.++...|++||+++++|+++++.|++++||+|++|+||+++|++.....           +...+.+...     .+.
T Consensus       147 ~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
T 1jtv_A          147 MGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF  226 (327)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999865421           0111111110     011


Q ss_pred             CCCC-CCHHHHHHHHHHHhcC-----CCcccceE
Q psy12833        218 PQRL-GHPDEFAQLVQSIITN-----PLINGEVI  245 (254)
Q Consensus       218 ~~~~-~~~~~va~~~~~l~~~-----~~~~G~~i  245 (254)
                       ++. .+|+|+|+.+++++++     .+++|+.+
T Consensus       227 -~~~~~~pedvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          227 -REAAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             -HHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             -hhcCCCHHHHHHHHHHHHcCCCCCeEEEeCchH
Confidence             232 5899999999999964     25677654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=3.6e-37  Score=255.08  Aligned_cols=213  Identities=17%  Similarity=0.223  Sum_probs=183.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---C-CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---G-PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   + .++.++.+|++|+++++++++++.+.++
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999988877766554   3 3688999999999999999999999999


Q ss_pred             CCcEEEeC-CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         78 KLDVNVNC-AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        78 ~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      ++|++||| +|... ..+.+      .+.+++++.+++|+.+++.++++++|.|.++       .++||++||..+..+.
T Consensus       106 ~iD~li~naag~~~-~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-------~g~iv~isS~~~~~~~  171 (286)
T 1xu9_A          106 GLDMLILNHITNTS-LNLFH------DDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-------NGSIVVVSSLAGKVAY  171 (286)
T ss_dssp             SCSEEEECCCCCCC-CCCCC------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEEEEGGGTSCC
T ss_pred             CCCEEEECCccCCC-Ccccc------CCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-------CCEEEEECCcccccCC
Confidence            99999999 56543 22222      5889999999999999999999999998764       4899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHh--ccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDL--AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ++...|++||+++++++++++.|+  ...+|++++++||+++|++.....       ... .. ....+|||+|+.++..
T Consensus       172 ~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-------~~~-~~-~~~~~~~~vA~~i~~~  242 (286)
T 1xu9_A          172 PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV-------SGI-VH-MQAAPKEECALEIIKG  242 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS-------CGG-GG-GGCBCHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhc-------ccc-cc-CCCCCHHHHHHHHHHH
Confidence            999999999999999999999999  578999999999999998753210       000 11 3457999999999998


Q ss_pred             hcC
Q psy12833        235 ITN  237 (254)
Q Consensus       235 ~~~  237 (254)
                      +..
T Consensus       243 ~~~  245 (286)
T 1xu9_A          243 GAL  245 (286)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            864

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=3.3e-36  Score=236.84  Aligned_cols=200  Identities=17%  Similarity=0.218  Sum_probs=175.4

Q ss_pred             Cc-EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          4 GV-VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         4 ~~-~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      || ++|||||++|||++++++|+ +|++|++++|+.+              ++++|++|+++++++++++    +++|++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------~~~~D~~~~~~~~~~~~~~----~~~d~v   62 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------DVTVDITNIDSIKKMYEQV----GKVDAI   62 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence            55 89999999999999999999 9999999999864              4889999999999998875    789999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      |||||.....++.+      .+.+++++.+++|+.+++++++++.+.|.+        .++|+++||..+..+.++...|
T Consensus        63 i~~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y  128 (202)
T 3d7l_A           63 VSATGSATFSPLTE------LTPEKNAVTISSKLGGQINLVLLGIDSLND--------KGSFTLTTGIMMEDPIVQGASA  128 (202)
T ss_dssp             EECCCCCCCCCGGG------CCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--------EEEEEEECCGGGTSCCTTCHHH
T ss_pred             EECCCCCCCCChhh------CCHHHHHHHHhhccHHHHHHHHHHHHHhcc--------CCEEEEEcchhhcCCCCccHHH
Confidence            99999765554444      789999999999999999999999998753        3799999999999999999999


Q ss_pred             hhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCccc
Q psy12833        163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLING  242 (254)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G  242 (254)
                      +.+|++++.+++.++.|+ ++|++++.++||++.|++..         ..+..+. .+.++++|+|+.++.++ ..+.+|
T Consensus       129 ~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~---------~~~~~~~-~~~~~~~dva~~~~~~~-~~~~~G  196 (202)
T 3d7l_A          129 AMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDK---------LEPFFEG-FLPVPAAKVARAFEKSV-FGAQTG  196 (202)
T ss_dssp             HHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHH---------HGGGSTT-CCCBCHHHHHHHHHHHH-HSCCCS
T ss_pred             HHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhh---------hhhhccc-cCCCCHHHHHHHHHHhh-hccccC
Confidence            999999999999999999 78999999999999998742         1223344 67889999999999888 457899


Q ss_pred             ceEEec
Q psy12833        243 EVIRID  248 (254)
Q Consensus       243 ~~i~~~  248 (254)
                      +.|++|
T Consensus       197 ~~~~vd  202 (202)
T 3d7l_A          197 ESYQVY  202 (202)
T ss_dssp             CEEEEC
T ss_pred             ceEecC
Confidence            999987

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=1.5e-36  Score=246.69  Aligned_cols=216  Identities=28%  Similarity=0.367  Sum_probs=179.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++|||||++|||++++++|+++|++|++++|+.++.+.          .+++|++|+++++++++++   .+++|++||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~D~~~~~~~~~~~~~~---~~~~d~vi~   68 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------DLSTPGGRETAVAAVLDRC---GGVLDGLVC   68 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------CTTSHHHHHHHHHHHHHHH---TTCCSEEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------cccCCcccHHHHHHHHHHc---CCCccEEEE
Confidence            689999999999999999999999999999998765432          1679999999999988854   368999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--------  156 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--------  156 (254)
                      |||....             .+.+++.+++|+.+++++++++.+.|.+..      .++||++||..+..+.        
T Consensus        69 ~Ag~~~~-------------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~~~~  129 (255)
T 2dkn_A           69 CAGVGVT-------------AANSGLVVAVNYFGVSALLDGLAEALSRGQ------QPAAVIVGSIAATQPGAAELPMVE  129 (255)
T ss_dssp             CCCCCTT-------------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS------SCEEEEECCGGGGSTTGGGCHHHH
T ss_pred             CCCCCCc-------------chhHHHHHHHHhHHHHHHHHHHHHHhhhcC------CceEEEEeccccccccccccchhh
Confidence            9996431             233788999999999999999999998765      5899999999888664        


Q ss_pred             ------------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcC--
Q psy12833        157 ------------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSI--  215 (254)
Q Consensus       157 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~--  215 (254)
                                        ++...|+.+|++++.+++.++.++.++|+++++++||.+.|++.... ............  
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~  209 (255)
T 2dkn_A          130 AMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVA  209 (255)
T ss_dssp             HHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCC
T ss_pred             hhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHH
Confidence                              46678999999999999999999999999999999999999986543 111111222222  


Q ss_pred             CCCCCCCCHHHHHHHHHHHhcCC--CcccceEEecCCccc
Q psy12833        216 PAPQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGALRM  253 (254)
Q Consensus       216 ~~~~~~~~~~~va~~~~~l~~~~--~~~G~~i~~~gG~~~  253 (254)
                      +. +++.+++|+|+.++++++++  +++|+.++++||.++
T Consensus       210 ~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  248 (255)
T 2dkn_A          210 PL-GRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDA  248 (255)
T ss_dssp             TT-SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             Hh-cCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEe
Confidence            44 78899999999999999754  789999999999753

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.6e-36  Score=293.99  Aligned_cols=233  Identities=21%  Similarity=0.263  Sum_probs=190.5

Q ss_pred             CCCcEEEEeCCCCh-HHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASG-LGKATVERIVREGGRVVLC-DLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~g-iG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |+||++|||||++| ||++++++|+++|++|+++ +|+.+.+++..+++       +.++.+++||++|+++++++++++
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            57999999999998 9999999999999999998 57776665554443       457889999999999999999999


Q ss_pred             HHH-----cC-CCcEEEeCCccCCCc-cccccCCCCcCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHhccCCCCCCC
Q psy12833         73 KDS-----FG-KLDVNVNCAGISCAF-KIFNYNKGTVHS--LDDFKRILLVNTVGTFNVARLS--AQLIHENKLNEDGLR  141 (254)
Q Consensus        73 ~~~-----~~-~id~li~~ag~~~~~-~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~  141 (254)
                      .+.     +| ++|+||||||+.... ++.+      .+  .++|++.+++|+.+++.+++.+  .|.|.++.      .
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d------~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~------~  820 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEH------IDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP------A  820 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCCCCSBCGGG------CCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC------E
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhh------CCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC------C
Confidence            998     66 999999999987655 5555      66  8999999999999999999987  67676543      5


Q ss_pred             cEEEEEeccccccCCCCCccchhchHHHHHh-HHHHHHHhccCCcEEEEEecCCcc-ccccccchHHHHHHHHhcCCCCC
Q psy12833        142 GVIINTASIAAYEGQSGQVAYSASKSGIVGM-TLPMARDLAGAGIRVNTIAPGLFD-TPLLSMLNEKVRNFLARSIPAPQ  219 (254)
Q Consensus       142 ~~ii~vss~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~~i~v~~v~Pg~~~-t~~~~~~~~~~~~~~~~~~~~~~  219 (254)
                      ++||++||..+..+  +...|++||+|+.+| ++.++.++++. |+||+|+||+++ |++..... ...+.. ...+  .
T Consensus       821 G~IVnISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~-~~~~~~-~~~p--l  893 (1887)
T 2uv8_A          821 QVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN-IIAEGI-EKMG--V  893 (1887)
T ss_dssp             EEEEEECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CC-TTHHHH-HTTS--C
T ss_pred             CEEEEEcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccch-hHHHHH-HhcC--C
Confidence            89999999998887  667999999999999 99999999888 999999999999 78764311 111112 2233  3


Q ss_pred             CCCCHHHHHHHHHHHhcC---CCcccceEEec--CCccc
Q psy12833        220 RLGHPDEFAQLVQSIITN---PLINGEVIRID--GALRM  253 (254)
Q Consensus       220 ~~~~~~~va~~~~~l~~~---~~~~G~~i~~~--gG~~~  253 (254)
                      +..+|+|+|..++||+++   .+++|+.|.+|  ||+++
T Consensus       894 r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~  932 (1887)
T 2uv8_A          894 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF  932 (1887)
T ss_dssp             CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTT
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeec
Confidence            566999999999999975   48899999875  99865

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.1e-37  Score=289.33  Aligned_cols=233  Identities=21%  Similarity=0.248  Sum_probs=192.6

Q ss_pred             CCCcEEEEeCCCCh-HHHHHHHHHHHcCCEEEEe-eCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASG-LGKATVERIVREGGRVVLC-DLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~g-iG~a~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |+||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++       +.++.+++||++|+++++++++++
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            57899999999998 9999999999999999998 67777776666655       446889999999999999999999


Q ss_pred             HHH-----cC-CCcEEEeCCccCCCc-cccccCCCCcCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHhccCCCCCCC
Q psy12833         73 KDS-----FG-KLDVNVNCAGISCAF-KIFNYNKGTVHS--LDDFKRILLVNTVGTFNVARLS--AQLIHENKLNEDGLR  141 (254)
Q Consensus        73 ~~~-----~~-~id~li~~ag~~~~~-~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~  141 (254)
                      .+.     +| ++|++|||||+.... ++.+      .+  .++|++.+++|+.+++.+++.+  .|.|.+++      .
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~d------lt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg------g  621 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEH------IDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP------A  621 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCCSBCSSS------CTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC------E
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhh------CCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC------C
Confidence            998     77 999999999986554 4444      56  8999999999999999999998  77776654      5


Q ss_pred             cEEEEEeccccccCCCCCccchhchHHHHHh-HHHHHHHhccCCcEEEEEecCCcc-ccccccchHHHHHHHHhcCCCCC
Q psy12833        142 GVIINTASIAAYEGQSGQVAYSASKSGIVGM-TLPMARDLAGAGIRVNTIAPGLFD-TPLLSMLNEKVRNFLARSIPAPQ  219 (254)
Q Consensus       142 ~~ii~vss~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~~i~v~~v~Pg~~~-t~~~~~~~~~~~~~~~~~~~~~~  219 (254)
                      ++||++||..+..+  +...|++||+|+++| .+.++.++++. |+||+|+||+++ |++.... + .........+  .
T Consensus       622 GrIVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~-e-~~~~~l~~ip--l  694 (1688)
T 2pff_A          622 QVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN-N-IIAEGIEKMG--V  694 (1688)
T ss_dssp             EECCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT-T-TCSTTTSSSS--C
T ss_pred             CEEEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc-h-HHHHHHHhCC--C
Confidence            89999999998877  567999999999999 88899999887 999999999999 7875431 0 0011111222  2


Q ss_pred             CCCCHHHHHHHHHHHhcCC---CcccceEEec--CCccc
Q psy12833        220 RLGHPDEFAQLVQSIITNP---LINGEVIRID--GALRM  253 (254)
Q Consensus       220 ~~~~~~~va~~~~~l~~~~---~~~G~~i~~~--gG~~~  253 (254)
                      +..+|+|+|..+++|++++   +++|+.+.+|  ||++.
T Consensus       695 R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~  733 (1688)
T 2pff_A          695 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF  733 (1688)
T ss_dssp             CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGG
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeee
Confidence            5669999999999999864   7899999875  99865

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.1e-34  Score=280.83  Aligned_cols=233  Identities=18%  Similarity=0.214  Sum_probs=189.4

Q ss_pred             CCCcEEEEeCCCCh-HHHHHHHHHHHcCCEEEEee-CCCchhHHHHH----Hh---CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASG-LGKATVERIVREGGRVVLCD-LPTSEGESVAK----EL---GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~g-iG~a~a~~l~~~g~~v~~~~-r~~~~~~~~~~----~~---~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |+||++|||||++| ||++++++|+++|++|++++ |+.+.+++..+    ++   +.++.++.||++|+++++++++++
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            57899999999999 99999999999999999985 55655544433    33   457889999999999999999999


Q ss_pred             HHH---cC-CCcEEEeCCccCCCc-cccccCCCCcCC--HHHHHHHHHHHhHHHHHHHHH--HHHHHHhccCCCCCCCcE
Q psy12833         73 KDS---FG-KLDVNVNCAGISCAF-KIFNYNKGTVHS--LDDFKRILLVNTVGTFNVARL--SAQLIHENKLNEDGLRGV  143 (254)
Q Consensus        73 ~~~---~~-~id~li~~ag~~~~~-~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~~~~~~~~  143 (254)
                      .+.   +| ++|+||||||+.... ++.+      .+  .++|++.+++|+.+++++++.  +++.|.++.      .++
T Consensus       730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d------~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~------~G~  797 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAAIPENGREIDS------IDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP------AQV  797 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCCCCCTTCCTTC------CCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC------EEE
T ss_pred             HHhhcccCCCCcEEEeCcccccCCCChhh------cCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC------CCE
Confidence            998   88 999999999986554 4444      67  899999999999999999987  667776543      589


Q ss_pred             EEEEeccccccCCCCCccchhchHHHHHhHHHHHH-HhccCCcEEEEEecCCcc-ccccccchHHHHHHHHhcCCCCCCC
Q psy12833        144 IINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR-DLAGAGIRVNTIAPGLFD-TPLLSMLNEKVRNFLARSIPAPQRL  221 (254)
Q Consensus       144 ii~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~-e~~~~~i~v~~v~Pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~  221 (254)
                      ||++||..+..+  +...|+++|+|+++|++.++. ++++. |+||+|+||+++ |++....  +.........+  .+.
T Consensus       798 IVnISS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~--~~~~~~~~~~p--lr~  870 (1878)
T 2uv9_A          798 ILPLSPNHGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN--NLVAEGVEKLG--VRT  870 (1878)
T ss_dssp             CCEECSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH--HHTHHHHHTTT--CCC
T ss_pred             EEEEcchhhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc--hhhHHHHHhcC--CCC
Confidence            999999998877  467899999999999886654 57766 999999999999 9986541  11122222333  255


Q ss_pred             CCHHHHHHHHHHHhcC---CCcccceEEe--cCCccc
Q psy12833        222 GHPDEFAQLVQSIITN---PLINGEVIRI--DGALRM  253 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~---~~~~G~~i~~--~gG~~~  253 (254)
                      .+|+|+|..+++|+++   .+++|+.+.+  |||+++
T Consensus       871 ~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          871 FSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             BCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred             CCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccc
Confidence            6999999999999974   5799999886  599865

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=9.6e-35  Score=229.21  Aligned_cols=199  Identities=19%  Similarity=0.220  Sum_probs=170.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++|||||++|||++++++|+++  +|++++|+.+++++..+++..  .++++|++|++++++++++    ++++|++||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~----~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEE----AGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHH----HCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHh----cCCCCEEEE
Confidence            58999999999999999999998  999999998888877776654  8899999999999999987    679999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchh
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA  164 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~  164 (254)
                      |||.....++.+      .+.+++++.+++|+.+++++++++    .+++      .++||++||..+..+.++...|++
T Consensus        73 ~ag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~------~~~iv~~sS~~~~~~~~~~~~Y~~  136 (207)
T 2yut_A           73 AVGKAGRASVRE------AGRDLVEEMLAAHLLTAAFVLKHA----RFQK------GARAVFFGAYPRYVQVPGFAAYAA  136 (207)
T ss_dssp             CCCCCCCBCSCC---------CHHHHHHHHHHHHHHHHHHHC----CEEE------EEEEEEECCCHHHHSSTTBHHHHH
T ss_pred             CCCcCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHH----HhcC------CcEEEEEcChhhccCCCCcchHHH
Confidence            999875544444      688899999999999999999988    2222      589999999999999999999999


Q ss_pred             chHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCC
Q psy12833        165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP  238 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  238 (254)
                      +|++++.+++.++.|++++|+++++++||++.|++...          ...+. ++.++|+|+|+.++++++.+
T Consensus       137 sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~----------~~~~~-~~~~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          137 AKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP----------LGGPP-KGALSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG----------GTSCC-TTCBCHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc----------cCCCC-CCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999987432          11233 78899999999999999754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=1.7e-32  Score=243.79  Aligned_cols=215  Identities=18%  Similarity=0.186  Sum_probs=176.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEe-eCCC-------------chhHHHHHHh---CCCceEEecCCCCHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGR-VVLC-DLPT-------------SEGESVAKEL---GPDVKFAPVDVTSEED   64 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~-~r~~-------------~~~~~~~~~~---~~~~~~~~~Dls~~~~   64 (254)
                      +++++|||||++|||++++++|+++|++ |+++ +|+.             +.++++.+++   +.++.++.||++|+++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5799999999999999999999999997 7777 8983             4455555544   7789999999999999


Q ss_pred             HHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEE
Q psy12833         65 VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVI  144 (254)
Q Consensus        65 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  144 (254)
                      ++++++++. .++++|+||||||+.....+.+      .+.+++++.+++|+.+++++.+.+.+.+.+++.     .++|
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~------~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~-----~~~i  397 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDSEPLAA------TDADALARVVTAKATAALHLDRLLREAAAAGGR-----PPVL  397 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCCCCTTT------CCHHHHHHHHHHHHHHHHHHHHHHHHTC----C-----CCEE
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCCCchhh------CCHHHHHHHHHHHHHHHHHHHHHhccccccCCC-----CCEE
Confidence            999999998 7899999999999876655555      899999999999999999999999998866420     3799


Q ss_pred             EEEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCH
Q psy12833        145 INTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHP  224 (254)
Q Consensus       145 i~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (254)
                      |++||.++..+.+++..|+++|+++++|    +.++...|+++++|+||.++|+|.....  ..+.+...  . ...++|
T Consensus       398 V~~SS~a~~~g~~g~~~YaaaKa~l~~l----A~~~~~~gi~v~sI~pG~~~tgm~~~~~--~~~~~~~~--g-~~~l~p  468 (525)
T 3qp9_A          398 VLFSSVAAIWGGAGQGAYAAGTAFLDAL----AGQHRADGPTVTSVAWSPWEGSRVTEGA--TGERLRRL--G-LRPLAP  468 (525)
T ss_dssp             EEEEEGGGTTCCTTCHHHHHHHHHHHHH----HTSCCSSCCEEEEEEECCBTTSGGGSSH--HHHHHHHT--T-BCCBCH
T ss_pred             EEECCHHHcCCCCCCHHHHHHHHHHHHH----HHHHHhCCCCEEEEECCccccccccchh--hHHHHHhc--C-CCCCCH
Confidence            9999999999999999999999988887    4677788999999999999999874322  11222211  1 345799


Q ss_pred             HHHHHHHHHHhcCC
Q psy12833        225 DEFAQLVQSIITNP  238 (254)
Q Consensus       225 ~~va~~~~~l~~~~  238 (254)
                      +++++.+.++++.+
T Consensus       469 ee~a~~l~~~l~~~  482 (525)
T 3qp9_A          469 ATALTALDTALGHG  482 (525)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=5.3e-31  Score=266.12  Aligned_cols=241  Identities=15%  Similarity=0.182  Sum_probs=178.2

Q ss_pred             CCCcEEEEeCCCCh-HHHHHHHHHHHcCCEEEEeeCCCch-----hHHHHHHh---CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASG-LGKATVERIVREGGRVVLCDLPTSE-----GESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~g-iG~a~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      ++||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++   +.++..++||++|+++++++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            68999999999999 9999999999999999999999877     66666666   345788999999999999999999


Q ss_pred             HH----HcCCCcEEEeCCccCCC-ccc---cccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEE
Q psy12833         73 KD----SFGKLDVNVNCAGISCA-FKI---FNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVI  144 (254)
Q Consensus        73 ~~----~~~~id~li~~ag~~~~-~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  144 (254)
                      .+    .+|++|++|||||+... .++   ....... .-...++..+++|+.+.+.+++.+.+.|..+....  ....+
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e-~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~--~~~ii 2290 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMS-EVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIAS--RLHVV 2290 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTS-CTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC--CEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--eeEEE
Confidence            98    88999999999997211 111   1100111 11224556699999999999999999998764211  01233


Q ss_pred             EEEeccccccCCCCCccchhchHHHHHhHHHHHHH--hccCCcEEEEEecCCcc-ccccccchHHHHHHHHhcCCCCCCC
Q psy12833        145 INTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD--LAGAGIRVNTIAPGLFD-TPLLSMLNEKVRNFLARSIPAPQRL  221 (254)
Q Consensus       145 i~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~~i~v~~v~Pg~~~-t~~~~~~~~~~~~~~~~~~~~~~~~  221 (254)
                      +..++..+.  .++...|++||+|+.+|+++|+.|  ++ .+|+||+++||+++ |++..... ...+.. ...+  .+.
T Consensus      2291 ~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a-~~IrVn~v~PG~v~tT~l~~~~~-~~~~~~-~~~~--~r~ 2363 (3089)
T 3zen_D         2291 LPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWA-ERVSLAHALIGWTKGTGLMGQND-AIVSAV-EEAG--VTT 2363 (3089)
T ss_dssp             EEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTT-TTEEEEEEECCCEECSTTTTTTT-TTHHHH-GGGS--CBC
T ss_pred             EECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccC-CCeEEEEEeecccCCCcccccch-hHHHHH-HhcC--CCC
Confidence            334433332  334568999999999999999999  65 46999999999998 66653321 111222 2233  345


Q ss_pred             CCHHHHHHHHHHHhcC---CCcccceEEec--CCcc
Q psy12833        222 GHPDEFAQLVQSIITN---PLINGEVIRID--GALR  252 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~---~~~~G~~i~~~--gG~~  252 (254)
                      .+|+|+|..++||+++   ...+|+.+.+|  ||+.
T Consensus      2364 ~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D         2364 YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp             EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS
T ss_pred             CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC
Confidence            5999999999999974   35567766665  9984

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=7.5e-31  Score=230.88  Aligned_cols=219  Identities=19%  Similarity=0.256  Sum_probs=171.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCc---hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTS---EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++++|||||++|||++++++|+++|+ +|++++|+..   ..+++.+++   +.++.++.||++|+++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            48999999999999999999999999 8999999643   344444443   778999999999999999999998777 


Q ss_pred             CCCcEEEeCCccC-CCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGIS-CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +++|++|||||+. ....+.+      .+.+++++.+++|+.+++++.+.+.+.    .      .++||++||..+..+
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~------~t~e~~~~vl~~nv~g~~~L~~~~~~~----~------~~~iV~~SS~a~~~g  381 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVAD------LTLGQLDALMRAKLTAARHLHELTADL----D------LDAFVLFSSGAAVWG  381 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTT------CCHHHHHHHHHTTHHHHHHHHHHHTTS----C------CSEEEEEEEHHHHTT
T ss_pred             CCCeEEEECCcccCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHhhcc----C------CCEEEEEeChHhcCC
Confidence            7899999999987 4444444      899999999999999999998876553    2      578999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      .+++..|+++|+++++|++.    +...|+++++|+||.+.+..+... ....+.+.+. .  ...++|++.+..+..++
T Consensus       382 ~~g~~~YaAaKa~ldala~~----~~~~Gi~v~sV~pG~w~~~gm~~~-~~~~~~l~~~-g--~~~l~pe~~~~~l~~~l  453 (496)
T 3mje_A          382 SGGQPGYAAANAYLDALAEH----RRSLGLTASSVAWGTWGEVGMATD-PEVHDRLVRQ-G--VLAMEPEHALGALDQML  453 (496)
T ss_dssp             CTTCHHHHHHHHHHHHHHHH----HHHTTCCCEEEEECEESSSCC-------CHHHHHT-T--EEEECHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHH----HHhcCCeEEEEECCcccCCccccC-hHHHHHHHhc-C--CCCCCHHHHHHHHHHHH
Confidence            99999999999999888764    456799999999999876554321 1111222211 0  22468999999999999


Q ss_pred             cCCCcccceEEe
Q psy12833        236 TNPLINGEVIRI  247 (254)
Q Consensus       236 ~~~~~~G~~i~~  247 (254)
                      ..+........+
T Consensus       454 ~~~~~~~~v~~l  465 (496)
T 3mje_A          454 ENDDTAAAITLM  465 (496)
T ss_dssp             HHTCSEEEECEE
T ss_pred             cCCCceEEEEEc
Confidence            754433333333

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=7.5e-30  Score=236.52  Aligned_cols=209  Identities=21%  Similarity=0.251  Sum_probs=174.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHH-HcCC-EEEEeeCC---CchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIV-REGG-RVVLCDLP---TSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~-~~g~-~v~~~~r~---~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      .+|++|||||++|||++++++|+ ++|+ +|++++|+   .+..++..+++   +.++.++.||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999 7999 59999998   44555655554   77899999999999999999999988


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                      .+ ++|++|||||+.....+.+      ++.++|++.+++|+.+++++.+++.+.|            +||++||.++..
T Consensus       609 ~~-~id~lVnnAGv~~~~~~~~------~t~e~~~~~~~~nv~G~~~l~~~~~~~l------------~iV~~SS~ag~~  669 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDDGVSES------LTVERLDQVLRPKVDGARNLLELIDPDV------------ALVLFSSVSGVL  669 (795)
T ss_dssp             TS-CEEEEEECCCCCCCCCGGG------CCHHHHHHHHCCCCCHHHHHHHHSCTTS------------EEEEEEETHHHH
T ss_pred             hC-CCEEEEECCCcCCCCchhh------CCHHHHHHHHHHHHHHHHHHHHHHhhCC------------EEEEEccHHhcC
Confidence            76 9999999999987766666      8999999999999999999999886544            699999999999


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      +.+++..|+++|+    |+++|++++.+.||++++|+||++.|+++... .+...+.+.+ ..  ...++++|....+..
T Consensus       670 g~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~-~g--~~~l~~~e~~~~~~~  742 (795)
T 3slk_A          670 GSGGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLAR-SG--LLPISTEEGLSQFDA  742 (795)
T ss_dssp             TCSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHH-TT--BCCCCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHh-cC--CCCCCHHHHHHHHHH
Confidence            9999999999996    77778888888999999999999998765332 2222233322 22  334688888888888


Q ss_pred             HhcC
Q psy12833        234 IITN  237 (254)
Q Consensus       234 l~~~  237 (254)
                      ++..
T Consensus       743 ~l~~  746 (795)
T 3slk_A          743 ACGG  746 (795)
T ss_dssp             HHTS
T ss_pred             HHhC
Confidence            8853

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=1.2e-28  Score=201.84  Aligned_cols=196  Identities=21%  Similarity=0.225  Sum_probs=159.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|++|||||+|+||++++++|+++|++|++++|+..+.+      +.++.++.+|++|+++++++++       ++|+
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   67 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------GPNEECVQCDLADANAVNAMVA-------GCDG   67 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------CTTEEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------CCCCEEEEcCCCCHHHHHHHHc-------CCCE
Confidence            45789999999999999999999999999999999876544      4678999999999999999887       7899


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc--------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY--------  153 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~--------  153 (254)
                      ||||||..              ..+.+++.+++|+.+++++++++.+    ..      .++||++||..++        
T Consensus        68 vi~~Ag~~--------------~~~~~~~~~~~N~~g~~~l~~a~~~----~~------~~~iv~~SS~~~~g~~~~~~~  123 (267)
T 3rft_A           68 IVHLGGIS--------------VEKPFEQILQGNIIGLYNLYEAARA----HG------QPRIVFASSNHTIGYYPQTER  123 (267)
T ss_dssp             EEECCSCC--------------SCCCHHHHHHHHTHHHHHHHHHHHH----TT------CCEEEEEEEGGGGTTSBTTSC
T ss_pred             EEECCCCc--------------CcCCHHHHHHHHHHHHHHHHHHHHH----cC------CCEEEEEcchHHhCCCCCCCC
Confidence            99999973              2345788999999999999999843    22      5799999998877        


Q ss_pred             ----cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHH
Q psy12833        154 ----EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       154 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  229 (254)
                          .+.++...|+.+|++.+.+++.++.++   |++++.++||.+.++......   .          ..+++++|+++
T Consensus       124 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~---~----------~~~~~~~d~a~  187 (267)
T 3rft_A          124 LGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM---L----------STWFSHDDFVS  187 (267)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH---H----------HHBCCHHHHHH
T ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc---e----------eeEEcHHHHHH
Confidence                344566899999999999999998876   788999999988877543211   0          23468999999


Q ss_pred             HHHHHhcCCCcccceEEecCC
Q psy12833        230 LVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       230 ~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      .+..++..+...+.++.+.++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~s~  208 (267)
T 3rft_A          188 LIEAVFRAPVLGCPVVWGASA  208 (267)
T ss_dssp             HHHHHHHCSCCCSCEEEECCC
T ss_pred             HHHHHHhCCCCCceEEEEeCC
Confidence            999999876665566665443

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=4.2e-29  Score=200.91  Aligned_cols=202  Identities=11%  Similarity=0.131  Sum_probs=160.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCc-eEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDV-KFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++|+++|||||+|+||++++++|+++|++|++++|+.++.+++.+   .++ .++++|++         +.+.+.++++|
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~Dl~---------~~~~~~~~~~D   86 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE---RGASDIVVANLE---------EDFSHAFASID   86 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---TTCSEEEECCTT---------SCCGGGGTTCS
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh---CCCceEEEcccH---------HHHHHHHcCCC
Confidence            678999999999999999999999999999999999888776654   368 89999998         34444556899


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC---C
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ---S  157 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~---~  157 (254)
                      +||||||...              .++++..+++|+.++.++++++...    .      .++||++||..+..+.   +
T Consensus        87 ~vi~~ag~~~--------------~~~~~~~~~~n~~~~~~l~~a~~~~----~------~~~iv~~SS~~~~~~~~~~~  142 (236)
T 3e8x_A           87 AVVFAAGSGP--------------HTGADKTILIDLWGAIKTIQEAEKR----G------IKRFIMVSSVGTVDPDQGPM  142 (236)
T ss_dssp             EEEECCCCCT--------------TSCHHHHHHTTTHHHHHHHHHHHHH----T------CCEEEEECCTTCSCGGGSCG
T ss_pred             EEEECCCCCC--------------CCCccccchhhHHHHHHHHHHHHHc----C------CCEEEEEecCCCCCCCCChh
Confidence            9999999642              2457888999999999999888432    2      4799999998777664   4


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      +...|+.+|++++.+.+       ..|++++.++||++.++........    . ...+....+++++|+|+.+++++++
T Consensus       143 ~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~----~-~~~~~~~~~i~~~Dva~~~~~~~~~  210 (236)
T 3e8x_A          143 NMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTV----S-PHFSEITRSITRHDVAKVIAELVDQ  210 (236)
T ss_dssp             GGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEE----E-SSCSCCCCCEEHHHHHHHHHHHTTC
T ss_pred             hhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEe----c-cCCCcccCcEeHHHHHHHHHHHhcC
Confidence            67899999999998876       5689999999999999864321100    0 0111126678999999999999988


Q ss_pred             CCcccceEEecCCc
Q psy12833        238 PLINGEVIRIDGAL  251 (254)
Q Consensus       238 ~~~~G~~i~~~gG~  251 (254)
                      +...|+.+++++|.
T Consensus       211 ~~~~g~~~~v~~~~  224 (236)
T 3e8x_A          211 QHTIGKTFEVLNGD  224 (236)
T ss_dssp             GGGTTEEEEEEECS
T ss_pred             ccccCCeEEEeCCC
Confidence            77899999998774

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.96  E-value=2.7e-28  Score=215.07  Aligned_cols=209  Identities=18%  Similarity=0.191  Sum_probs=165.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCc---hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTS---EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      .++++|||||++|||++++++|+++|++ |++++|+.+   ..+++.+++   +.++.++.||++|++++.++++++ ..
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            5799999999999999999999999995 999999865   334444433   677899999999999999999999 55


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|+||||||+.....+.+      .+.+++++.+++|+.+++++.+.+.+    .+      .++||++||..+..+
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~------~~~~~~~~~~~~nv~g~~~L~~~~~~----~~------~~~~V~~SS~a~~~g  367 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDT------LTGERIERASRAKVLGARNLHELTRE----LD------LTAFVLFSSFASAFG  367 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGG------CCHHHHHHHTHHHHHHHHHHHHHHTT----SC------CSEEEEEEEHHHHTC
T ss_pred             cCCCcEEEECCccCCCCcccc------CCHHHHHHHHHHHHHHHHHHHHHhCc----CC------CCEEEEEcChHhcCC
Confidence            689999999999876655555      79999999999999999999887643    22      579999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccc-ccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP-LLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .++...|+++|++++.|++.    +...|+++++|+||.+.++ |...   ...+.+   .......++++++++.+..+
T Consensus       368 ~~g~~~Yaaaka~l~~la~~----~~~~gi~v~~i~pG~~~~~gm~~~---~~~~~~---~~~g~~~i~~e~~a~~l~~~  437 (486)
T 2fr1_A          368 APGLGGYAPGNAYLDGLAQQ----RRSDGLPATAVAWGTWAGSGMAEG---PVADRF---RRHGVIEMPPETACRALQNA  437 (486)
T ss_dssp             CTTCTTTHHHHHHHHHHHHH----HHHTTCCCEEEEECCBC---------------C---TTTTEECBCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHH----HHhcCCeEEEEECCeeCCCcccch---hHHHHH---HhcCCCCCCHHHHHHHHHHH
Confidence            99999999999999887654    4457999999999999886 3221   111111   11112467999999999999


Q ss_pred             hcCC
Q psy12833        235 ITNP  238 (254)
Q Consensus       235 ~~~~  238 (254)
                      +..+
T Consensus       438 l~~~  441 (486)
T 2fr1_A          438 LDRA  441 (486)
T ss_dssp             HHTT
T ss_pred             HhCC
Confidence            9643

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.96  E-value=3.4e-27  Score=208.90  Aligned_cols=205  Identities=22%  Similarity=0.290  Sum_probs=167.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCc---hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTS---EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      .++++|||||++|||++++++|+++|+ +|++++|+..   ..+++.+++   +.++.++.||++|++++++++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            579999999999999999999999999 6999999864   344444444   56789999999999999999887    


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                       +++|+||||||+.....+.+      .+.++++..+++|+.+++++.+.+.+. .  .      .++||++||..+..+
T Consensus       334 -~~ld~VVh~AGv~~~~~~~~------~~~~~~~~~~~~nv~g~~~L~~~~~~~-~--~------~~~~V~~SS~a~~~g  397 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDDAVIDT------LSPESFETVRGAKVCGAELLHQLTADI-K--G------LDAFVLFSSVTGTWG  397 (511)
T ss_dssp             -SCCSEEEECCCCCCCBCGGG------CCHHHHHHHHHHHHHHHHHHHHHTSSC-T--T------CCCEEEEEEGGGTTC
T ss_pred             -CCCcEEEECCcccCCccccc------CCHHHHHHHHHHHHHHHHHHHHHHhhc-c--C------CCEEEEEeCHHhcCC
Confidence             68999999999876665555      789999999999999999998875432 0  1      478999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCc-cccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF-DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .++...|+++|++++.|++.+    ...|+++++|+||++ +|+|..........  ...    ...++++++++.+..+
T Consensus       398 ~~g~~~YaaaKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~~~~~~--~~g----~~~l~~e~~a~~l~~a  467 (511)
T 2z5l_A          398 NAGQGAYAAANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAGEESLS--RRG----LRAMDPDAAVDALLGA  467 (511)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHHHHHHH--HHT----BCCBCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccccHHHHH--hcC----CCCCCHHHHHHHHHHH
Confidence            999999999999999988754    467999999999999 78776543221111  111    2357999999999999


Q ss_pred             hcC
Q psy12833        235 ITN  237 (254)
Q Consensus       235 ~~~  237 (254)
                      +..
T Consensus       468 l~~  470 (511)
T 2z5l_A          468 MGR  470 (511)
T ss_dssp             HHH
T ss_pred             HhC
Confidence            963

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.95  E-value=4.4e-27  Score=198.76  Aligned_cols=225  Identities=16%  Similarity=0.097  Sum_probs=169.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+.++++|||||+|+||++++++|+++|++|++++|+.+...+..+++    +.++.++.+|++|++++++++++     
T Consensus         2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   76 (341)
T 3enk_A            2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----   76 (341)
T ss_dssp             CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----
T ss_pred             CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----
Confidence            567889999999999999999999999999999999877655544433    66899999999999999999886     


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-  155 (254)
                      +++|++|||||......          ..+...+.+++|+.++.++++++    .+..      .++||++||...+.. 
T Consensus        77 ~~~d~vih~A~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~----~~~~------~~~iv~~SS~~~~g~~  136 (341)
T 3enk_A           77 HPITAAIHFAALKAVGE----------SVAKPIEYYRNNLDSLLSLLRVM----RERA------VKRIVFSSSATVYGVP  136 (341)
T ss_dssp             SCCCEEEECCCCCCHHH----------HHHCHHHHHHHHHHHHHHHHHHH----HHTT------CCEEEEEEEGGGBCSC
T ss_pred             cCCcEEEECccccccCc----------cccChHHHHHHHHHHHHHHHHHH----HhCC------CCEEEEEecceEecCC
Confidence            38999999999754321          23444577889999998887654    3333      479999999776632 


Q ss_pred             ----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc------------ccchHHHHHHHHh
Q psy12833        156 ----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLAR  213 (254)
Q Consensus       156 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~------------~~~~~~~~~~~~~  213 (254)
                                ..+...|+.+|.+.+.+++.++.++.  +++++.++|+.+..+..            ....+........
T Consensus       137 ~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~  214 (341)
T 3enk_A          137 ERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVG  214 (341)
T ss_dssp             SSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhc
Confidence                      22446899999999999999998864  69999999988876632            1122222222222


Q ss_pred             cCC------------C---CCCCCCHHHHHHHHHHHhcC--CCcccceEEecCCcc
Q psy12833        214 SIP------------A---PQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGALR  252 (254)
Q Consensus       214 ~~~------------~---~~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~  252 (254)
                      ..+            .   ...+++++|+|++++.++..  +...|+++++.+|..
T Consensus       215 ~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~  270 (341)
T 3enk_A          215 KLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRG  270 (341)
T ss_dssp             SSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCC
T ss_pred             CCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCc
Confidence            111            0   02367899999999999975  346799999998864

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.95  E-value=4.7e-27  Score=199.22  Aligned_cols=218  Identities=16%  Similarity=0.147  Sum_probs=172.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHc-CC-EEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVRE-GG-RVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+++|++|||||+|+||++++++|+++ |+ +|++++|+..+.+++.+++ ..++.++.+|++|++++.++++       
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE-------   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT-------
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh-------
Confidence            578999999999999999999999999 97 9999999988777776666 3578999999999998888775       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|+||||||.....          ....+..+.+++|+.++.++++++.+.    .      .+++|++||..+..|  
T Consensus        91 ~~D~Vih~Aa~~~~~----------~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~------v~~~V~~SS~~~~~p--  148 (344)
T 2gn4_A           91 GVDICIHAAALKHVP----------IAEYNPLECIKTNIMGASNVINACLKN----A------ISQVIALSTDKAANP--  148 (344)
T ss_dssp             TCSEEEECCCCCCHH----------HHHHSHHHHHHHHHHHHHHHHHHHHHT----T------CSEEEEECCGGGSSC--
T ss_pred             cCCEEEECCCCCCCC----------chhcCHHHHHHHHHHHHHHHHHHHHhC----C------CCEEEEecCCccCCC--
Confidence            789999999975321          122345678999999999999998874    1      468999999876554  


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcC-C----C---CCCCCCHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSI-P----A---PQRLGHPDEFAQ  229 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~-~----~---~~~~~~~~~va~  229 (254)
                       ...|+.+|++.+.+++.++.++.+.|+++++++||.+.++.... .+.+........ +    .   ...+++++|+|+
T Consensus       149 -~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~-i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~  226 (344)
T 2gn4_A          149 -INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV-VPFFKKLVQNKASEIPITDIRMTRFWITLDEGVS  226 (344)
T ss_dssp             -CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSH-HHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHH
T ss_pred             -ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCH-HHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHH
Confidence             46899999999999999999888889999999999999875432 222223222221 1    1   023679999999


Q ss_pred             HHHHHhcCCCcccceEEecCC
Q psy12833        230 LVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       230 ~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      +++.++..+ ..|+++.++++
T Consensus       227 ~v~~~l~~~-~~g~~~~~~~~  246 (344)
T 2gn4_A          227 FVLKSLKRM-HGGEIFVPKIP  246 (344)
T ss_dssp             HHHHHHHHC-CSSCEEEECCC
T ss_pred             HHHHHHhhc-cCCCEEecCCC
Confidence            999999754 36888888765

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=7e-28  Score=194.27  Aligned_cols=199  Identities=15%  Similarity=0.131  Sum_probs=152.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |++|++|||||+|+||++++++|+++|+  +|++++|+.+..+....   .++.++.+|++|+++++++++       ++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~-------~~   85 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY---KNVNQEVVDFEKLDDYASAFQ-------GH   85 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG---GGCEEEECCGGGGGGGGGGGS-------SC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc---CCceEEecCcCCHHHHHHHhc-------CC
Confidence            4689999999999999999999999999  99999998776543221   357889999999988877765       79


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||...             ...+++..+++|+.++..+++++.    +..      .++||++||..+..+  +.
T Consensus        86 d~vi~~ag~~~-------------~~~~~~~~~~~n~~~~~~~~~~~~----~~~------~~~iv~~SS~~~~~~--~~  140 (242)
T 2bka_A           86 DVGFCCLGTTR-------------GKAGAEGFVRVDRDYVLKSAELAK----AGG------CKHFNLLSSKGADKS--SN  140 (242)
T ss_dssp             SEEEECCCCCH-------------HHHHHHHHHHHHTHHHHHHHHHHH----HTT------CCEEEEECCTTCCTT--CS
T ss_pred             CEEEECCCccc-------------ccCCcccceeeeHHHHHHHHHHHH----HCC------CCEEEEEccCcCCCC--Cc
Confidence            99999999632             224567889999999988887654    333      479999999987764  34


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCc-EEEEEecCCccccccccc-hHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHH
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGI-RVNTIAPGLFDTPLLSML-NEKVRNFLARSIPA---PQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~va~~~~~l  234 (254)
                      ..|+.+|++++.+++.+       ++ +++.++||.+.++..... .+...+......|.   .++.++++|+|+.++++
T Consensus       141 ~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  213 (242)
T 2bka_A          141 FLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNN  213 (242)
T ss_dssp             SHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHH
Confidence            58999999999998764       45 899999999999865432 22222333333441   15678999999999999


Q ss_pred             hcCCCccc
Q psy12833        235 ITNPLING  242 (254)
Q Consensus       235 ~~~~~~~G  242 (254)
                      ++++.-.|
T Consensus       214 ~~~~~~~~  221 (242)
T 2bka_A          214 VVRPRDKQ  221 (242)
T ss_dssp             HTSCCCSS
T ss_pred             HhCccccC
Confidence            98654334

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.95  E-value=1.4e-26  Score=195.90  Aligned_cols=220  Identities=19%  Similarity=0.177  Sum_probs=167.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|||||+|+||++++++|+++|++|++++|+. .......+++  ..++.++.+|++|+++++++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            4899999999999999999999999999999853 2222222222  246889999999999999998863     6999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-------  154 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-------  154 (254)
                      ||||||.....          .+.++++..+++|+.++.++++++.+...         .++||++||...+.       
T Consensus        77 vih~A~~~~~~----------~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---------~~~iv~~SS~~v~g~~~~~~~  137 (347)
T 1orr_A           77 CFHLAGQVAMT----------TSIDNPCMDFEINVGGTLNLLEAVRQYNS---------NCNIIYSSTNKVYGDLEQYKY  137 (347)
T ss_dssp             EEECCCCCCHH----------HHHHCHHHHHHHHHHHHHHHHHHHHHHCT---------TCEEEEEEEGGGGTTCTTSCE
T ss_pred             EEECCcccChh----------hhhhCHHHHHHHHHHHHHHHHHHHHHhCC---------CceEEEeccHHHhCCCCcCCc
Confidence            99999964211          23456788999999999999999987642         25899999987543       


Q ss_pred             --------------------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-----chHHHHH
Q psy12833        155 --------------------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-----LNEKVRN  209 (254)
Q Consensus       155 --------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-----~~~~~~~  209 (254)
                                          +.++...|+.+|++.+.+++.++.++   |++++.++||.+.++....     ....+..
T Consensus       138 ~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~  214 (347)
T 1orr_A          138 NETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQ  214 (347)
T ss_dssp             EECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHH
T ss_pred             ccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHH
Confidence                                22356789999999999999998876   7999999999999886432     1122222


Q ss_pred             -HHHhcC----CC--C------CCCCCHHHHHHHHHHHhcC-CCcccceEEecCCc
Q psy12833        210 -FLARSI----PA--P------QRLGHPDEFAQLVQSIITN-PLINGEVIRIDGAL  251 (254)
Q Consensus       210 -~~~~~~----~~--~------~~~~~~~~va~~~~~l~~~-~~~~G~~i~~~gG~  251 (254)
                       ......    +.  .      ..+++++|+|++++++++. +..+|++++++||.
T Consensus       215 ~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          215 KAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCG
T ss_pred             HHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCC
Confidence             222221    21  0      1266999999999999975 56789999999985

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.95  E-value=6.4e-27  Score=196.21  Aligned_cols=214  Identities=16%  Similarity=0.136  Sum_probs=166.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      .+++|||||+|+||++++++|+++|++|++++|+.+. +.    +  ++.++.+|++|++++.++++.     +++|+||
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vi   79 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--NVEMISLDIMDSQRVKKVISD-----IKPDYIF   79 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--TEEEEECCTTCHHHHHHHHHH-----HCCSEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--eeeEEECCCCCHHHHHHHHHh-----cCCCEEE
Confidence            4799999999999999999999999999999998664 22    2  688999999999999998876     2799999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-------
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-------  156 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-------  156 (254)
                      ||||.....          .+.++++..+++|+.++.++++++ +.+.  .      .++||++||...+.+.       
T Consensus        80 h~A~~~~~~----------~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~------~~~iv~~SS~~v~g~~~~~~~~~  140 (321)
T 2pk3_A           80 HLAAKSSVK----------DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L------DCRILTIGSSEEYGMILPEESPV  140 (321)
T ss_dssp             ECCSCCCHH----------HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C------CCEEEEEEEGGGTBSCCGGGCSB
T ss_pred             EcCcccchh----------hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C------CCeEEEEccHHhcCCCCCCCCCC
Confidence            999964321          123457889999999999999998 5442  2      4799999998765432       


Q ss_pred             ------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--chHHHHHHHHh---c--CC-------
Q psy12833        157 ------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLAR---S--IP-------  216 (254)
Q Consensus       157 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~---~--~~-------  216 (254)
                            ++...|+.+|++.+.+++.++.++   |++++.++|+.+.++....  ....+......   .  .+       
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  217 (321)
T 2pk3_A          141 SEENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNL  217 (321)
T ss_dssp             CTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCS
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCC
Confidence                  456789999999999999998874   8999999999998886542  12222222221   1  01       


Q ss_pred             -CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        217 -APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       217 -~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                       ....+++++|+|++++.+++.+ .+|+++++++|..
T Consensus       218 ~~~~~~v~v~Dva~a~~~~~~~~-~~g~~~~i~~~~~  253 (321)
T 2pk3_A          218 EAVRDFTDVRDIVQAYWLLSQYG-KTGDVYNVCSGIG  253 (321)
T ss_dssp             SCEEEEEEHHHHHHHHHHHHHHC-CTTCEEEESCSCE
T ss_pred             CcEEeeEEHHHHHHHHHHHHhCC-CCCCeEEeCCCCC
Confidence             0134679999999999999765 5799999998864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.95  E-value=5.5e-27  Score=198.01  Aligned_cols=219  Identities=15%  Similarity=0.099  Sum_probs=168.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEE-ecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFA-PVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~-~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+    +.++.++ .+|++|+++++++++      
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   82 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc------
Confidence            57899999999999999999999999999999999877665554432    3578888 899999988877765      


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-C
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-G  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-~  155 (254)
                       ++|+|||||+.....             +++++.+++|+.++.++++++.+.   ..      .++||++||..++. +
T Consensus        83 -~~d~vih~A~~~~~~-------------~~~~~~~~~n~~g~~~ll~~~~~~---~~------~~~iv~~SS~~~~~~~  139 (342)
T 1y1p_A           83 -GAAGVAHIASVVSFS-------------NKYDEVVTPAIGGTLNALRAAAAT---PS------VKRFVLTSSTVSALIP  139 (342)
T ss_dssp             -TCSEEEECCCCCSCC-------------SCHHHHHHHHHHHHHHHHHHHHTC---TT------CCEEEEECCGGGTCCC
T ss_pred             -CCCEEEEeCCCCCCC-------------CCHHHHHHHHHHHHHHHHHHHHhC---CC------CcEEEEeccHHHhcCC
Confidence             789999999965321             235678999999999999987652   11      47999999987652 2


Q ss_pred             C------------------------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc---
Q psy12833        156 Q------------------------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM---  202 (254)
Q Consensus       156 ~------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~---  202 (254)
                      .                              .+...|+.+|++.+.+++.++.++.. +++++.++|+.+.++....   
T Consensus       140 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~  218 (342)
T 1y1p_A          140 KPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQ  218 (342)
T ss_dssp             CTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTC
T ss_pred             CCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCC
Confidence            1                              12357999999999999999999866 8999999999998886542   


Q ss_pred             --chHHHHHHHHhcCC-------CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCC
Q psy12833        203 --LNEKVRNFLARSIP-------APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       203 --~~~~~~~~~~~~~~-------~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                        ....+........+       ....+++++|+|++++.++..+..+|+.+..+|+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~  275 (342)
T 1y1p_A          219 SGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAG  275 (342)
T ss_dssp             CCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCE
T ss_pred             CccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCC
Confidence              12222222211111       1146789999999999999877778887777665

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.95  E-value=1.9e-26  Score=194.53  Aligned_cols=220  Identities=19%  Similarity=0.158  Sum_probs=165.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCc--hhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTS--EGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |+++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++  ..++.++.+|++|++++++++.     
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   74 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLEDDPRYTFVKGDVADYELVKELVR-----   74 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhccCCceEEEEcCCCCHHHHHHHhh-----
Confidence            356789999999999999999999997  89999998642  22222 222  3578899999999999988873     


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-  154 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-  154 (254)
                        ++|+||||||.....          .+.++++..+++|+.++.++++++.+.   ..      .++||++||...+. 
T Consensus        75 --~~d~vih~A~~~~~~----------~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~------~~~iv~~SS~~vyg~  133 (336)
T 2hun_A           75 --KVDGVVHLAAESHVD----------RSISSPEIFLHSNVIGTYTLLESIRRE---NP------EVRFVHVSTDEVYGD  133 (336)
T ss_dssp             --TCSEEEECCCCCCHH----------HHHHCTHHHHHHHHHHHHHHHHHHHHH---CT------TSEEEEEEEGGGGCC
T ss_pred             --CCCEEEECCCCcChh----------hhhhCHHHHHHHHHHHHHHHHHHHHHh---CC------CcEEEEeccHHHHCC
Confidence              799999999964311          234567788999999999999999876   11      36999999976543 


Q ss_pred             ----------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--chHHHHHHHHhcCC------
Q psy12833        155 ----------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIP------  216 (254)
Q Consensus       155 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~------  216 (254)
                                +.++...|+.+|++.+.+++.++.++   |++++.++|+.+.++....  ..+..........+      
T Consensus       134 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (336)
T 2hun_A          134 ILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGT  210 (336)
T ss_dssp             CSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC
T ss_pred             CCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCC
Confidence                      33456789999999999999998875   7999999999998887531  22222222222111      


Q ss_pred             --CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        217 --APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       217 --~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                        ....+++++|+|++++.+++.+ .+|+.++++||..
T Consensus       211 ~~~~~~~i~v~Dva~~~~~~~~~~-~~g~~~~v~~~~~  247 (336)
T 2hun_A          211 GKNVRDWLYVEDHVRAIELVLLKG-ESREIYNISAGEE  247 (336)
T ss_dssp             ---CEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCSCE
T ss_pred             CCceeeeEEHHHHHHHHHHHHhCC-CCCCEEEeCCCCc
Confidence              0135678999999999999754 4899999999864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.95  E-value=5.6e-26  Score=193.27  Aligned_cols=225  Identities=15%  Similarity=0.061  Sum_probs=173.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |+++++|||||+|+||++++++|+++|++|++++|+.+..+...+.+  ..++.++++|++|++++.++++..     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            56899999999999999999999999999999999877665554443  457899999999999999998876     79


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-----
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-----  154 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-----  154 (254)
                      |+||||||....    .      .+.++++..+++|+.++.++++++.+.   ..      .++||++||...+.     
T Consensus        82 d~vih~A~~~~~----~------~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~------~~~~v~~SS~~vyg~~~~~  142 (357)
T 1rkx_A           82 EIVFHMAAQPLV----R------LSYSEPVETYSTNVMGTVYLLEAIRHV---GG------VKAVVNITSDKCYDNKEWI  142 (357)
T ss_dssp             SEEEECCSCCCH----H------HHHHCHHHHHHHHTHHHHHHHHHHHHH---CC------CCEEEEECCGGGBCCCCSS
T ss_pred             CEEEECCCCccc----c------cchhCHHHHHHHHHHHHHHHHHHHHHh---CC------CCeEEEecCHHHhCCCCcC
Confidence            999999995311    1      245667889999999999999998763   11      36899999986432     


Q ss_pred             -------CCCCCccchhchHHHHHhHHHHHHHhc------cCCcEEEEEecCCccccccc---cchHHHHHHHHhcCC--
Q psy12833        155 -------GQSGQVAYSASKSGIVGMTLPMARDLA------GAGIRVNTIAPGLFDTPLLS---MLNEKVRNFLARSIP--  216 (254)
Q Consensus       155 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~------~~~i~v~~v~Pg~~~t~~~~---~~~~~~~~~~~~~~~--  216 (254)
                             +..+...|+.+|.+.+.+++.++.++.      +.|++++.++||.+.++...   .....+........+  
T Consensus       143 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~  222 (357)
T 1rkx_A          143 WGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVI  222 (357)
T ss_dssp             SCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEE
T ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEE
Confidence                   233567899999999999999999885      45899999999999987542   222333333322211  


Q ss_pred             --C---CCCCCCHHHHHHHHHHHhcC----CCcccceEEecCC
Q psy12833        217 --A---PQRLGHPDEFAQLVQSIITN----PLINGEVIRIDGA  250 (254)
Q Consensus       217 --~---~~~~~~~~~va~~~~~l~~~----~~~~G~~i~~~gG  250 (254)
                        .   ...+++++|+|++++.++..    +...|+++++.+|
T Consensus       223 ~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          223 IRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             CSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             ECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence              1   02467899999999998853    2356789998764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.95  E-value=4e-26  Score=192.91  Aligned_cols=224  Identities=16%  Similarity=0.101  Sum_probs=165.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH-HHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE-SVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~-~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+++++|||||+|+||++++++|+++|++|++++|+.+..+ ...+++  ..++.++.+|++|++++.++++.+     +
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            57899999999999999999999999999999999876543 122233  246889999999999999998876     7


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-----
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-----  153 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-----  153 (254)
                      +|+||||||....    +      .+.++++..+++|+.++.++++++... ..        .++||++||...+     
T Consensus        76 ~d~vih~A~~~~~----~------~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~--------~~~iv~~SS~~vyg~~~~  136 (345)
T 2z1m_A           76 PDEVYNLAAQSFV----G------VSFEQPILTAEVDAIGVLRILEALRTV-KP--------DTKFYQASTSEMFGKVQE  136 (345)
T ss_dssp             CSEEEECCCCCCH----H------HHTTSHHHHHHHHTHHHHHHHHHHHHH-CT--------TCEEEEEEEGGGGCSCSS
T ss_pred             CCEEEECCCCcch----h------hhhhCHHHHHHHHHHHHHHHHHHHHHh-CC--------CceEEEEechhhcCCCCC
Confidence            9999999996421    1      234567889999999999999998852 11        2799999998654     


Q ss_pred             ------cCCCCCccchhchHHHHHhHHHHHHHhc---cCCcEEEEEecCCccccccccchHHHHHHHHhcC--------C
Q psy12833        154 ------EGQSGQVAYSASKSGIVGMTLPMARDLA---GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSI--------P  216 (254)
Q Consensus       154 ------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~--------~  216 (254)
                            .+.++...|+.+|++.+.+++.++.++.   ..++.++.+.||...+.+.............+..        +
T Consensus       137 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (345)
T 2z1m_A          137 IPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLN  216 (345)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTT
T ss_pred             CCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCC
Confidence                  2334567899999999999999999875   3355677888998887654322222211111111        1


Q ss_pred             CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        217 APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       217 ~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      ....+++++|+|++++++++.+.  ++.+++.+|.
T Consensus       217 ~~~~~~~v~Dva~a~~~~~~~~~--~~~~~i~~~~  249 (345)
T 2z1m_A          217 AKRDWGYAPEYVEAMWLMMQQPE--PDDYVIATGE  249 (345)
T ss_dssp             CEECCEEHHHHHHHHHHHHTSSS--CCCEEECCSC
T ss_pred             ceeeeEEHHHHHHHHHHHHhCCC--CceEEEeCCC
Confidence            10237899999999999997643  4678887664

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.94  E-value=9.9e-26  Score=191.45  Aligned_cols=221  Identities=17%  Similarity=0.060  Sum_probs=169.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch----hHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE----GESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~----~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      ++++++|||||+|+||++++++|+++|++|++++|+...    ++++.+++    ..++.++.+|++|++++.++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            356899999999999999999999999999999997642    33333322    2578899999999998888876   


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                          ++|+||||||.....          .+.++++..+++|+.++.++++++.+.    .      .++||++||...+
T Consensus       102 ----~~d~vih~A~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~------~~~~v~~SS~~~~  157 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSVP----------RSINDPITSNATNIDGFLNMLIAARDA----K------VQSFTYAASSSTY  157 (352)
T ss_dssp             ----TCSEEEECCSCCCHH----------HHHHCHHHHHHHHTHHHHHHHHHHHHT----T------CSEEEEEEEGGGG
T ss_pred             ----CCCEEEECCcccCch----------hhhhCHHHHHHHHHHHHHHHHHHHHHc----C------CCEEEEeccHHhc
Confidence                799999999964311          134567888999999999999988652    2      4789999998876


Q ss_pred             cCCC-----------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------chHHHHHHHHhcCC
Q psy12833        154 EGQS-----------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------LNEKVRNFLARSIP  216 (254)
Q Consensus       154 ~~~~-----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------~~~~~~~~~~~~~~  216 (254)
                      .+.+           +...|+.+|++.+.+++.++.++   |++++.++||.+.++....      ....+........+
T Consensus       158 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  234 (352)
T 1sb8_A          158 GDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDD  234 (352)
T ss_dssp             TTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCC
Confidence            5432           35689999999999999998875   7999999999998876432      12233333332222


Q ss_pred             C--C------CCCCCHHHHHHHHHHHhcC-CCcccceEEecCCcc
Q psy12833        217 A--P------QRLGHPDEFAQLVQSIITN-PLINGEVIRIDGALR  252 (254)
Q Consensus       217 ~--~------~~~~~~~~va~~~~~l~~~-~~~~G~~i~~~gG~~  252 (254)
                      .  +      ..+++++|+|++++.++.. +...|+++++.+|..
T Consensus       235 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~  279 (352)
T 1sb8_A          235 VYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGR  279 (352)
T ss_dssp             CEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCC
T ss_pred             cEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCC
Confidence            1  0      2467999999999999875 456899999988754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.94  E-value=1.5e-26  Score=194.93  Aligned_cols=213  Identities=17%  Similarity=0.133  Sum_probs=158.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+...+..+++ .++.++.+|++|+++++++++++     ++|+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~   91 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSF-----KPTH   91 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhc-----CCCE
Confidence            57899999999999999999999999999999999765433222222 46889999999999999998876     7999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-----
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-----  156 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-----  156 (254)
                      ||||||.....           +.++++  +++|+.++.++++++...    .      .++||++||...+.+.     
T Consensus        92 vih~A~~~~~~-----------~~~~~~--~~~N~~~~~~l~~a~~~~----~------~~~iV~~SS~~~~~~~~~~~~  148 (330)
T 2pzm_A           92 VVHSAAAYKDP-----------DDWAED--AATNVQGSINVAKAASKA----G------VKRLLNFQTALCYGRPATVPI  148 (330)
T ss_dssp             EEECCCCCSCT-----------TCHHHH--HHHHTHHHHHHHHHHHHH----T------CSEEEEEEEGGGGCSCSSSSB
T ss_pred             EEECCccCCCc-----------cccChh--HHHHHHHHHHHHHHHHHc----C------CCEEEEecCHHHhCCCccCCC
Confidence            99999975321           224455  999999999999988742    2      4799999999876543     


Q ss_pred             C------CCccchhchHHHHHhHHHHHHHhccCCcE-EEEEecCCccccccccchHHHHHHHHhcCCC-----CCCCCCH
Q psy12833        157 S------GQVAYSASKSGIVGMTLPMARDLAGAGIR-VNTIAPGLFDTPLLSMLNEKVRNFLARSIPA-----PQRLGHP  224 (254)
Q Consensus       157 ~------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  224 (254)
                      +      +...|+.+|++.+.+++.+  ++....+| .+.+.||. .+++..    .+........+.     ...++++
T Consensus       149 ~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~  221 (330)
T 2pzm_A          149 PIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIP----TFYKRLKAGQKCFCSDTVRDFLDM  221 (330)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHH----HHHHHHHTTCCCCEESCEECEEEH
T ss_pred             CcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHH----HHHHHHHcCCEEeCCCCEecceeH
Confidence            2      5678999999999999887  44444556 45666664 333321    211222111111     1456899


Q ss_pred             HHHHH-HHHHHhcCCCcccceEEecCCcc
Q psy12833        225 DEFAQ-LVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       225 ~~va~-~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      +|+|+ +++++++.+.  |++++++||..
T Consensus       222 ~Dva~~a~~~~~~~~~--g~~~~v~~~~~  248 (330)
T 2pzm_A          222 SDFLAIADLSLQEGRP--TGVFNVSTGEG  248 (330)
T ss_dssp             HHHHHHHHHHTSTTCC--CEEEEESCSCC
T ss_pred             HHHHHHHHHHHhhcCC--CCEEEeCCCCC
Confidence            99999 9999997654  99999999864

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.94  E-value=6.6e-26  Score=192.99  Aligned_cols=226  Identities=19%  Similarity=0.177  Sum_probs=168.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCC--chhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          6 VGLVTGGASGLGKATVERIVRE-GGRVVLCDLPT--SEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~--~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++|||||+|+||++++++|+++ |++|++++|+.  ...+.+ .++  ..++.++.+|++|++++.+++++.     ++|
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCC
Confidence            5999999999999999999998 79999999865  222222 222  346889999999999999988763     799


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc------
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE------  154 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~------  154 (254)
                      +||||||....    +      .+.++++..+++|+.++.++++++.+.|..-+.. ....++||++||...+.      
T Consensus        76 ~vih~A~~~~~----~------~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~-~~~~~~iv~~SS~~v~g~~~~~~  144 (361)
T 1kew_A           76 AVMHLAAESHV----D------RSITGPAAFIETNIVGTYALLEVARKYWSALGED-KKNNFRFHHISTDEVYGDLPHPD  144 (361)
T ss_dssp             EEEECCSCCCH----H------HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH-HHHHCEEEEEEEGGGGCCCCCGG
T ss_pred             EEEECCCCcCh----h------hhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccc-cccCceEEEeCCHHHhCCCcccc
Confidence            99999996431    1      2345678899999999999999999987431000 00024999999976432      


Q ss_pred             ---------------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--chHHHHHHHHhcCCC
Q psy12833        155 ---------------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPA  217 (254)
Q Consensus       155 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~  217 (254)
                                     +.++...|+.+|++.+.+++.++.++   |++++.++|+.+.++....  ..+.+........+.
T Consensus       145 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  221 (361)
T 1kew_A          145 EVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPL  221 (361)
T ss_dssp             GSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCE
T ss_pred             cccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCc
Confidence                           22456789999999999999999876   7999999999999987532  222222222222110


Q ss_pred             --------CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 --------PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 --------~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                              ...+++++|+|++++++++.+ .+|++++++||..
T Consensus       222 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~-~~g~~~~v~~~~~  263 (361)
T 1kew_A          222 PIYGKGDQIRDWLYVEDHARALHMVVTEG-KAGETYNIGGHNE  263 (361)
T ss_dssp             EEETTSCCEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCCCE
T ss_pred             eEcCCCceeEeeEEHHHHHHHHHHHHhCC-CCCCEEEecCCCe
Confidence                    134678999999999999754 5899999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=4.4e-26  Score=181.44  Aligned_cols=191  Identities=7%  Similarity=-0.014  Sum_probs=147.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHH-HcCCEEEEeeCCCc-hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          5 VVGLVTGGASGLGKATVERIV-REGGRVVLCDLPTS-EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~-~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      |++|||||+|+||++++++|+ ++|++|++++|+.+ .++++. +...++.++++|++|+++++++++       ++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAVT-------NAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHHc-------CCCEE
Confidence            689999999999999999999 89999999999987 666554 235678999999999999998886       78999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc--
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV--  160 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~--  160 (254)
                      |||+|..                         |+.     ++.+++.+.+..      .++||++||..+..+.+...  
T Consensus        78 v~~ag~~-------------------------n~~-----~~~~~~~~~~~~------~~~iv~iSs~~~~~~~~~~~~~  121 (221)
T 3r6d_A           78 FVGAMES-------------------------GSD-----MASIVKALSRXN------IRRVIGVSMAGLSGEFPVALEK  121 (221)
T ss_dssp             EESCCCC-------------------------HHH-----HHHHHHHHHHTT------CCEEEEEEETTTTSCSCHHHHH
T ss_pred             EEcCCCC-------------------------Chh-----HHHHHHHHHhcC------CCeEEEEeeceecCCCCccccc
Confidence            9999842                         222     777888887765      57999999999887665433  


Q ss_pred             --------cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccc-ccccchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        161 --------AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP-LLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       161 --------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                              .|+.+|.+++.+.+.       .|++++.++||++.++ ........     ....+..+..++++|+|+.+
T Consensus       122 ~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~dvA~~~  189 (221)
T 3r6d_A          122 WTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELI-----PEGAQFNDAQVSREAVVKAI  189 (221)
T ss_dssp             HHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEE-----CTTSCCCCCEEEHHHHHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeec-----cCCccCCCceeeHHHHHHHH
Confidence                    799999999887753       6899999999999887 32221100     01112224578999999999


Q ss_pred             HHHh--cCC-CcccceEEecCCc
Q psy12833        232 QSII--TNP-LINGEVIRIDGAL  251 (254)
Q Consensus       232 ~~l~--~~~-~~~G~~i~~~gG~  251 (254)
                      ++++  +++ ...++.+.+.+..
T Consensus       190 ~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          190 FDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             HHHHTCSCCGGGTTEEEEEECTT
T ss_pred             HHHHHhcChhhhhcceeeecCCC
Confidence            9999  754 3556677666543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=1.8e-26  Score=186.82  Aligned_cols=217  Identities=12%  Similarity=0.003  Sum_probs=158.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc--CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVRE--GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++++++|||||+|+||++++++|+++  |++|++++|+.++.++    +..++.++.+|++|++++.++++       ++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~-------~~   70 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----IGGEADVFIGDITDADSINPAFQ-------GI   70 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----TTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----cCCCeeEEEecCCCHHHHHHHHc-------CC
Confidence            46789999999999999999999999  8999999998655433    35678899999999999988876       68


Q ss_pred             cEEEeCCccCCCccc--cc-cCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         80 DVNVNCAGISCAFKI--FN-YNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        80 d~li~~ag~~~~~~~--~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      |++|||||.......  .. .....+...+.+.+.+++|+.++.++++++...    .      .++||++||..+..+.
T Consensus        71 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~------~~~iv~~SS~~~~~~~  140 (253)
T 1xq6_A           71 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G------VKHIVVVGSMGGTNPD  140 (253)
T ss_dssp             SEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T------CSEEEEEEETTTTCTT
T ss_pred             CEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C------CCEEEEEcCccCCCCC
Confidence            999999997542211  00 000001233445567899999999988877542    2      4689999999877655


Q ss_pred             CCCcc-----chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        157 SGQVA-----YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       157 ~~~~~-----Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      ++...     |+.+|.+++.+++.       .|++++.++||.+.++.....   .... ..+..  .. .+.++++|+|
T Consensus       141 ~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~-~~~~~--~~-~~~~~~~Dva  209 (253)
T 1xq6_A          141 HPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKD-DELLQ--TD-TKTVPRADVA  209 (253)
T ss_dssp             CGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEEST-TGGGG--SS-CCEEEHHHHH
T ss_pred             CccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCC-cCCcC--CC-CcEEcHHHHH
Confidence            44444     45589988887653       689999999999988753210   0000 00000  12 4578999999


Q ss_pred             HHHHHHhcCCCcccceEEecCC
Q psy12833        229 QLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       229 ~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      +.++++++.+..+|+.+++++|
T Consensus       210 ~~~~~~~~~~~~~g~~~~i~~~  231 (253)
T 1xq6_A          210 EVCIQALLFEEAKNKAFDLGSK  231 (253)
T ss_dssp             HHHHHHTTCGGGTTEEEEEEEC
T ss_pred             HHHHHHHcCccccCCEEEecCC
Confidence            9999999876678999999886

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=3.4e-25  Score=173.92  Aligned_cols=199  Identities=15%  Similarity=0.109  Sum_probs=152.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++++++||||+|+||++++++|+++|++|++++|+.+..+..   ...++.++.+|++|++++.++++       ++|++
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   71 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVA-------GQDAV   71 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHT-------TCSEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc---cCCceEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            458999999999999999999999999999999987654321   14578999999999999888876       58999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC----C
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS----G  158 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~----~  158 (254)
                      |||+|....   .+      .        .++|+.+...+++++..    ..      .+++|++||.......+    +
T Consensus        72 i~~a~~~~~---~~------~--------~~~n~~~~~~~~~~~~~----~~------~~~~v~~Ss~~~~~~~~~~~~~  124 (206)
T 1hdo_A           72 IVLLGTRND---LS------P--------TTVMSEGARNIVAAMKA----HG------VDKVVACTSAFLLWDPTKVPPR  124 (206)
T ss_dssp             EECCCCTTC---CS------C--------CCHHHHHHHHHHHHHHH----HT------CCEEEEECCGGGTSCTTCSCGG
T ss_pred             EECccCCCC---CC------c--------cchHHHHHHHHHHHHHH----hC------CCeEEEEeeeeeccCccccccc
Confidence            999996432   11      0        12677777777776654    22      46899999997766544    5


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCc-cccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF-DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      ...|+.+|.+++.+.+       ..+++++.++||.+ .++....+...    . ...|. +.+++++|+|+.+++++++
T Consensus       125 ~~~y~~~K~~~e~~~~-------~~~i~~~~lrp~~~~~~~~~~~~~~~----~-~~~~~-~~~i~~~Dva~~~~~~~~~  191 (206)
T 1hdo_A          125 LQAVTDDHIRMHKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTVT----L-DGRGP-SRVISKHDLGHFMLRCLTT  191 (206)
T ss_dssp             GHHHHHHHHHHHHHHH-------HTCSEEEEECCSEEECCCCCSCCEEE----S-SSCSS-CSEEEHHHHHHHHHHTTSC
T ss_pred             chhHHHHHHHHHHHHH-------hCCCCEEEEeCCcccCCCCCcceEec----c-cCCCC-CCccCHHHHHHHHHHHhcC
Confidence            6789999999998874       26899999999998 44332211100    0 11222 5788999999999999987


Q ss_pred             CCcccceEEecCCc
Q psy12833        238 PLINGEVIRIDGAL  251 (254)
Q Consensus       238 ~~~~G~~i~~~gG~  251 (254)
                      +..+|+.++++||+
T Consensus       192 ~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          192 DEYDGHSTYPSHQY  205 (206)
T ss_dssp             STTTTCEEEEECCC
T ss_pred             ccccccceeeeccc
Confidence            77899999999986

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.93  E-value=6.4e-25  Score=186.00  Aligned_cols=216  Identities=19%  Similarity=0.182  Sum_probs=163.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc--CCEEEEeeCCCch-hHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE--GGRVVLCDLPTSE-GESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~--g~~v~~~~r~~~~-~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|||||+|+||++++++|+++  |++|++++|+... ..+..+++ ..++.++.+|++|++++.++++       .+|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   77 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   77 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh-------cCC
Confidence            68999999999999999999999  8999999996531 11111222 3578899999999998888876       569


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc------
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE------  154 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~------  154 (254)
                      +||||||.....          .+.++++..+++|+.++.++++++.+.    .       .+||++||...+.      
T Consensus        78 ~vih~A~~~~~~----------~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-------~~~v~~SS~~vyg~~~~~~  136 (348)
T 1oc2_A           78 AIVHYAAESHND----------NSLNDPSPFIHTNFIGTYTLLEAARKY----D-------IRFHHVSTDEVYGDLPLRE  136 (348)
T ss_dssp             EEEECCSCCCHH----------HHHHCCHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGGCCBCCGG
T ss_pred             EEEECCcccCcc----------chhhCHHHHHHHHHHHHHHHHHHHHHh----C-------CeEEEecccceeCCCcccc
Confidence            999999964311          234566788999999999999998875    1       3899999976442      


Q ss_pred             -----------------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc--cchHHHHHHHHhcC
Q psy12833        155 -----------------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSI  215 (254)
Q Consensus       155 -----------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~~  215 (254)
                                       +.++...|+.+|++.+.+++.++.++   |++++.++|+.+.++...  ...+..........
T Consensus       137 ~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~  213 (348)
T 1oc2_A          137 DLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGI  213 (348)
T ss_dssp             GSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTC
T ss_pred             cccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCC
Confidence                             23356789999999999999998876   799999999999887653  22222222222221


Q ss_pred             CC--------CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        216 PA--------PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       216 ~~--------~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      +.        ...+++++|+|++++.+++.+ .+|+++++++|..
T Consensus       214 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~g~~~~i~~~~~  257 (348)
T 1oc2_A          214 KPKLYGEGKNVRDWIHTNDHSTGVWAILTKG-RMGETYLIGADGE  257 (348)
T ss_dssp             CCEEETTSCCEEECEEHHHHHHHHHHHHHHC-CTTCEEEECCSCE
T ss_pred             CceEecCCCceEeeEEHHHHHHHHHHHhhCC-CCCCeEEeCCCCC
Confidence            11        135678999999999999754 4799999998863

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.93  E-value=7.1e-25  Score=186.00  Aligned_cols=221  Identities=14%  Similarity=0.058  Sum_probs=170.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--------CCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--------PDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      ++++++|||||+|+||++++++|.++|++|++++|+..........+.        .++.++.+|++|++++.++++   
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---
Confidence            467899999999999999999999999999999997765444333321        679999999999998888876   


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                          ++|+|||+|+.....          ...+++...+++|+.++.++++++...    .      .+++|++||...+
T Consensus       100 ----~~d~Vih~A~~~~~~----------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~------~~~~v~~SS~~vy  155 (351)
T 3ruf_A          100 ----GVDHVLHQAALGSVP----------RSIVDPITTNATNITGFLNILHAAKNA----Q------VQSFTYAASSSTY  155 (351)
T ss_dssp             ----TCSEEEECCCCCCHH----------HHHHCHHHHHHHHTHHHHHHHHHHHHT----T------CSEEEEEEEGGGG
T ss_pred             ----CCCEEEECCccCCcc----------hhhhCHHHHHHHHHHHHHHHHHHHHHc----C------CCEEEEEecHHhc
Confidence                799999999964321          244567788999999999998887542    2      3689999998776


Q ss_pred             cCCC-----------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------chHHHHHHHHhcCC
Q psy12833        154 EGQS-----------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------LNEKVRNFLARSIP  216 (254)
Q Consensus       154 ~~~~-----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------~~~~~~~~~~~~~~  216 (254)
                      ...+           +...|+.+|.+.+.+++.++.++   |++++.++|+.+..+....      ....+........+
T Consensus       156 g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (351)
T 3ruf_A          156 GDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDD  232 (351)
T ss_dssp             TTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCC
Confidence            4332           35689999999999999998875   7999999999998775432      22333333333222


Q ss_pred             C--------CCCCCCHHHHHHHHHHHhcC-CCcccceEEecCCcc
Q psy12833        217 A--------PQRLGHPDEFAQLVQSIITN-PLINGEVIRIDGALR  252 (254)
Q Consensus       217 ~--------~~~~~~~~~va~~~~~l~~~-~~~~G~~i~~~gG~~  252 (254)
                      .        ...+++++|+|++++.++.. +...|+++++.+|..
T Consensus       233 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~  277 (351)
T 3ruf_A          233 VYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDR  277 (351)
T ss_dssp             CEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCC
T ss_pred             cEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCc
Confidence            1        02467899999999999976 567899999988754

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=7e-26  Score=180.00  Aligned_cols=192  Identities=14%  Similarity=0.152  Sum_probs=154.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCC-HHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-EEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++|||||+|+||++++++|+++|++|++++|+.+..+..     .++.++++|++| ++++.++++       ++|+|||
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi~   69 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----NNVKAVHFDVDWTPEEMAKQLH-------GMDAIIN   69 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----TTEEEEECCTTSCHHHHHTTTT-------TCSEEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----CCceEEEecccCCHHHHHHHHc-------CCCEEEE
Confidence            699999999999999999999999999999987765433     578999999999 988887776       6999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG------  158 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~------  158 (254)
                      |||....                  ..+++|+.++.++++++.    +..      .++||++||..+..+.+.      
T Consensus        70 ~ag~~~~------------------~~~~~n~~~~~~l~~a~~----~~~------~~~iv~~SS~~~~~~~~~~e~~~~  121 (219)
T 3dqp_A           70 VSGSGGK------------------SLLKVDLYGAVKLMQAAE----KAE------VKRFILLSTIFSLQPEKWIGAGFD  121 (219)
T ss_dssp             CCCCTTS------------------SCCCCCCHHHHHHHHHHH----HTT------CCEEEEECCTTTTCGGGCCSHHHH
T ss_pred             CCcCCCC------------------CcEeEeHHHHHHHHHHHH----HhC------CCEEEEECcccccCCCcccccccc
Confidence            9997531                  146778888888887763    232      469999999988876655      


Q ss_pred             -CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        159 -QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       159 -~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                       ...|+.+|.+.+.+.+      ...|++++.++||.+.++.......       -.... ..+++++|+|+.++.++.+
T Consensus       122 ~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~-------~~~~~-~~~i~~~Dva~~i~~~l~~  187 (219)
T 3dqp_A          122 ALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLID-------INDEV-SASNTIGDVADTIKELVMT  187 (219)
T ss_dssp             HTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEE-------ESSSC-CCCEEHHHHHHHHHHHHTC
T ss_pred             cccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCccc-------cCCCc-CCcccHHHHHHHHHHHHhC
Confidence             7799999999998886      3679999999999998865422110       00122 6788999999999999987


Q ss_pred             CCcccceEEecCCc
Q psy12833        238 PLINGEVIRIDGAL  251 (254)
Q Consensus       238 ~~~~G~~i~~~gG~  251 (254)
                      +...|+++++++|.
T Consensus       188 ~~~~g~~~~i~~g~  201 (219)
T 3dqp_A          188 DHSIGKVISMHNGK  201 (219)
T ss_dssp             GGGTTEEEEEEECS
T ss_pred             ccccCcEEEeCCCC
Confidence            76779999997764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.93  E-value=1.9e-24  Score=183.12  Aligned_cols=209  Identities=14%  Similarity=0.115  Sum_probs=160.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+.         .++.++.+|++|++++.++++       ++|+|
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   81 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------TGGEEVVGSLEDGQALSDAIM-------GVSAV   81 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------SCCSEEESCTTCHHHHHHHHT-------TCSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------CCccEEecCcCCHHHHHHHHh-------CCCEE
Confidence            56899999999999999999999999999999998765         468899999999999888876       79999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-------
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-------  155 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-------  155 (254)
                      ||+|+...            .+.+.++..+++|+.++.++++++..    ..      .++||++||...+..       
T Consensus        82 ih~A~~~~------------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~------~~~~V~~SS~~vyg~~~~~~~~  139 (347)
T 4id9_A           82 LHLGAFMS------------WAPADRDRMFAVNVEGTRRLLDAASA----AG------VRRFVFASSGEVYPENRPEFLP  139 (347)
T ss_dssp             EECCCCCC------------SSGGGHHHHHHHHTHHHHHHHHHHHH----TT------CSEEEEEEEGGGTTTTSCSSSS
T ss_pred             EECCcccC------------cchhhHHHHHHHHHHHHHHHHHHHHH----cC------CCeEEEECCHHHhCCCCCCCCC
Confidence            99998643            23445588999999999999888754    22      469999999765533       


Q ss_pred             ------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcc-------------cccccc-------------c
Q psy12833        156 ------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFD-------------TPLLSM-------------L  203 (254)
Q Consensus       156 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~-------------t~~~~~-------------~  203 (254)
                            ..+...|+.+|.+.+.+++.++.+.   +++++.++|+.+.             .+....             .
T Consensus       140 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~  216 (347)
T 4id9_A          140 VTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAA  216 (347)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHH
T ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCcccccccccccccchhH
Confidence                  2356789999999999999988764   8999999999998             443211             1


Q ss_pred             hHHHHHHHHhcCCC--------CCCC----CCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        204 NEKVRNFLARSIPA--------PQRL----GHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       204 ~~~~~~~~~~~~~~--------~~~~----~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      ...+........+.        ...+    ++++|+|++++.++..+...|+.+++.+|..
T Consensus       217 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~  277 (347)
T 4id9_A          217 IAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEP  277 (347)
T ss_dssp             HHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSC
T ss_pred             HHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCc
Confidence            11122222111110        0233    8899999999999987656799999988764

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.93  E-value=5.8e-24  Score=183.61  Aligned_cols=223  Identities=17%  Similarity=0.090  Sum_probs=163.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH-----------------HH---HHHhCCCceEEecCCCCH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE-----------------SV---AKELGPDVKFAPVDVTSE   62 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~-----------------~~---~~~~~~~~~~~~~Dls~~   62 (254)
                      ++.++|||||+|.||++++++|+++|++|++++|+.....                 .+   ......++.++.+|++|+
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            4578999999999999999999999999999988643211                 11   112256789999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCc
Q psy12833         63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRG  142 (254)
Q Consensus        63 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~  142 (254)
                      +++.++++..     ++|+||||||...... ..      .+++.+...+++|+.++.++++++.+.-   .      ..
T Consensus        90 ~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~------~~  148 (404)
T 1i24_A           90 EFLAESFKSF-----EPDSVVHFGEQRSAPY-SM------IDRSRAVYTQHNNVIGTLNVLFAIKEFG---E------EC  148 (404)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHH-HT------SCHHHHHHHHHHHHHHHHHHHHHHHHHC---T------TC
T ss_pred             HHHHHHHhcc-----CCCEEEECCCCCCccc-hh------hCccchhhhHHHHHHHHHHHHHHHHHhC---C------Cc
Confidence            9999988865     6999999999653221 11      3566677899999999999999886531   1      24


Q ss_pred             EEEEEecccccc------------------------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccc
Q psy12833        143 VIINTASIAAYE------------------------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP  198 (254)
Q Consensus       143 ~ii~vss~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~  198 (254)
                      +||++||...+.                        +..+...|+.+|++.+.+++.++.++   |++++.++||.+.++
T Consensus       149 ~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp  225 (404)
T 1i24_A          149 HLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGV  225 (404)
T ss_dssp             EEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECS
T ss_pred             EEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCC
Confidence            899999986543                        23345689999999999999998876   899999999999887


Q ss_pred             ccc-------------------cchHHHHHHHHhcCC-----C---CCCCCCHHHHHHHHHHHhcCCCccc--ceEEecC
Q psy12833        199 LLS-------------------MLNEKVRNFLARSIP-----A---PQRLGHPDEFAQLVQSIITNPLING--EVIRIDG  249 (254)
Q Consensus       199 ~~~-------------------~~~~~~~~~~~~~~~-----~---~~~~~~~~~va~~~~~l~~~~~~~G--~~i~~~g  249 (254)
                      ...                   .....+........+     .   ...+++++|+|++++.++..+...|  +++++.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~  305 (404)
T 1i24_A          226 KTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT  305 (404)
T ss_dssp             CCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS
T ss_pred             CCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC
Confidence            532                   112223232222211     1   0245789999999999997654457  7888854

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.93  E-value=1.1e-24  Score=184.06  Aligned_cols=209  Identities=17%  Similarity=0.120  Sum_probs=156.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|+||++++++|+++|++|++++|+....+++.+   .++.++.+|++|++++.++++       ++|+||||
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~   84 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY---LEPECRVAEMLDHAGLERALR-------GLDGVIFS   84 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG---GCCEEEECCTTCHHHHHHHTT-------TCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc---CCeEEEEecCCCHHHHHHHHc-------CCCEEEEC
Confidence            79999999999999999999999999999998776544321   368899999999998888776       68999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC-------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG-------  158 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~-------  158 (254)
                      |+...            ...+++++.+++|+.++.++++++.+.    .      .+++|++||...+.+.+.       
T Consensus        85 a~~~~------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~------~~~~v~~SS~~~~~~~~~~~~~~E~  142 (342)
T 2x4g_A           85 AGYYP------------SRPRRWQEEVASALGQTNPFYAACLQA----R------VPRILYVGSAYAMPRHPQGLPGHEG  142 (342)
T ss_dssp             ------------------------CHHHHHHHHHHHHHHHHHHH----T------CSCEEEECCGGGSCCCTTSSCBCTT
T ss_pred             CccCc------------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C------CCeEEEECCHHhhCcCCCCCCCCCC
Confidence            99642            133567788999999999999988874    1      368999999887755443       


Q ss_pred             ---------CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc-ccchHHHHHHHHhcCCC-----CCCCCC
Q psy12833        159 ---------QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPA-----PQRLGH  223 (254)
Q Consensus       159 ---------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~-~~~~~~~~~~~~~~~~~-----~~~~~~  223 (254)
                               ...|+.+|.+.+.+++.++.   . |++++.++||.+.++.. ...............+.     ...+++
T Consensus       143 ~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  218 (342)
T 2x4g_A          143 LFYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVID  218 (342)
T ss_dssp             CCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEE
T ss_pred             CCCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceee
Confidence                     67899999999999999876   3 89999999999988765 21012222222222111     023679


Q ss_pred             HHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        224 PDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       224 ~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      ++|+|++++.+++.+.. |+.+++.||.
T Consensus       219 v~Dva~~~~~~~~~~~~-g~~~~v~~~~  245 (342)
T 2x4g_A          219 AAEAGRGLLMALERGRI-GERYLLTGHN  245 (342)
T ss_dssp             HHHHHHHHHHHHHHSCT-TCEEEECCEE
T ss_pred             HHHHHHHHHHHHhCCCC-CceEEEcCCc
Confidence            99999999999975443 9999999885

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.93  E-value=1.6e-24  Score=180.86  Aligned_cols=213  Identities=18%  Similarity=0.166  Sum_probs=159.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|+||++++++|+++|++|++++|..+...   +.+..++.++++|++|++++.+++++.     ++|++|||
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~   73 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKGVPFFRVDLRDKEGVERAFREF-----RPTHVSHQ   73 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhcccCeEEEECCCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            6999999999999999999999999999998543221   122346788999999999999888753     78999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc-cccc------C---
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI-AAYE------G---  155 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~-~~~~------~---  155 (254)
                      |+.....          .+.+++...+++|+.++.++++++..    ..      .++||++||. ..+.      +   
T Consensus        74 a~~~~~~----------~~~~~~~~~~~~N~~g~~~l~~a~~~----~~------~~~iv~~SS~~~~~g~~~~~~~~~E  133 (311)
T 2p5y_A           74 AAQASVK----------VSVEDPVLDFEVNLLGGLNLLEACRQ----YG------VEKLVFASTGGAIYGEVPEGERAEE  133 (311)
T ss_dssp             CSCCCHH----------HHHHCHHHHHHHHTHHHHHHHHHHHH----TT------CSEEEEEEEHHHHHCCCCTTCCBCT
T ss_pred             ccccCch----------hhhhCHHHHHHHHHHHHHHHHHHHHH----hC------CCEEEEeCCChhhcCCCCCCCCcCC
Confidence            9864311          23456788999999999999988753    22      4689999998 3221      1   


Q ss_pred             ---CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-----chHHHHHHHHhcCC---------C-
Q psy12833        156 ---QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-----LNEKVRNFLARSIP---------A-  217 (254)
Q Consensus       156 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-----~~~~~~~~~~~~~~---------~-  217 (254)
                         ..+...|+.+|++.+.+++.++.++   |++++.++|+.+.++....     ..+.+.....+..+         . 
T Consensus       134 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (311)
T 2p5y_A          134 TWPPRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGD  210 (311)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTS
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCC
Confidence               1245689999999999999998875   7999999999998876432     11222222222111         1 


Q ss_pred             ---CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 ---PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 ---~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                         ...+++++|+|++++.++..+   |+.+++.+|..
T Consensus       211 g~~~~~~i~v~Dva~a~~~~~~~~---~~~~~i~~~~~  245 (311)
T 2p5y_A          211 EGCVRDYVYVGDVAEAHALALFSL---EGIYNVGTGEG  245 (311)
T ss_dssp             CCCEECEEEHHHHHHHHHHHHHHC---CEEEEESCSCC
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhCC---CCEEEeCCCCC
Confidence               024578999999999999754   89999988864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.93  E-value=3.5e-24  Score=183.79  Aligned_cols=216  Identities=17%  Similarity=0.107  Sum_probs=163.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +++++|||||+|+||++++++|+++|++|++++|+........   ..++.++.+|++|++++.++++       ++|+|
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~v~~~~~Dl~d~~~~~~~~~-------~~d~V   97 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED---MFCDEFHLVDLRVMENCLKVTE-------GVDHV   97 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG---GTCSEEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc---cCCceEEECCCCCHHHHHHHhC-------CCCEE
Confidence            3579999999999999999999999999999999866533211   2468899999999999888875       79999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc--------
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE--------  154 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~--------  154 (254)
                      ||||+......+         ..++++..+++|+.++.++++++..    ..      .++||++||...+.        
T Consensus        98 ih~A~~~~~~~~---------~~~~~~~~~~~Nv~g~~~ll~a~~~----~~------~~~~V~~SS~~v~~~~~~~~~~  158 (379)
T 2c5a_A           98 FNLAADMGGMGF---------IQSNHSVIMYNNTMISFNMIEAARI----NG------IKRFFYASSACIYPEFKQLETT  158 (379)
T ss_dssp             EECCCCCCCHHH---------HTTCHHHHHHHHHHHHHHHHHHHHH----TT------CSEEEEEEEGGGSCGGGSSSSS
T ss_pred             EECceecCcccc---------cccCHHHHHHHHHHHHHHHHHHHHH----cC------CCEEEEEeehheeCCCCCCCcc
Confidence            999996432111         1245678899999999999988754    22      46899999977543        


Q ss_pred             ----------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------chHHHHHHHHhcCC--
Q psy12833        155 ----------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------LNEKVRNFLARSIP--  216 (254)
Q Consensus       155 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------~~~~~~~~~~~~~~--  216 (254)
                                +..+...|+.+|.+.+.+++.++.++   |++++.++||.+.++....      ....+........+  
T Consensus       159 ~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (379)
T 2c5a_A          159 NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF  235 (379)
T ss_dssp             SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCE
T ss_pred             CCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCce
Confidence                      22345689999999999999988765   7999999999998875432      22233333322211  


Q ss_pred             ----C---CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        217 ----A---PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       217 ----~---~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                          .   ...+++++|+|++++.++..+  .|+.+++.+|..
T Consensus       236 ~~~g~g~~~~~~i~v~Dva~ai~~~l~~~--~~~~~ni~~~~~  276 (379)
T 2c5a_A          236 EMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEM  276 (379)
T ss_dssp             EEESCSCCEECCEEHHHHHHHHHHHHHSS--CCSCEEECCCCC
T ss_pred             EEeCCCCeeEEEEEHHHHHHHHHHHhhcc--CCCeEEeCCCCc
Confidence                0   134678999999999999765  578899988754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.93  E-value=4.1e-24  Score=180.92  Aligned_cols=221  Identities=19%  Similarity=0.180  Sum_probs=161.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCc--hhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTS--EGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++++++|||||+|+||++++++|+++|  ++|+..+|...  ..+.+ +++  ..++.++.+|++|++++.++++..   
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   97 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNV-KSIQDHPNYYFVKGEIQNGELLEHVIKER---   97 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhh-hhhccCCCeEEEEcCCCCHHHHHHHHhhc---
Confidence            567899999999999999999999999  67887777542  22222 112  257899999999999999999864   


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                        ++|+|||+|+.....          ...++++..+++|+.++.++++++...    .      .+++|++||...+..
T Consensus        98 --~~d~Vih~A~~~~~~----------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~------~~~~v~~SS~~vy~~  155 (346)
T 4egb_A           98 --DVQVIVNFAAESHVD----------RSIENPIPFYDTNVIGTVTLLELVKKY----P------HIKLVQVSTDEVYGS  155 (346)
T ss_dssp             --TCCEEEECCCCC-------------------CHHHHHHTHHHHHHHHHHHHS----T------TSEEEEEEEGGGGCC
T ss_pred             --CCCEEEECCcccchh----------hhhhCHHHHHHHHHHHHHHHHHHHHhc----C------CCEEEEeCchHHhCC
Confidence              699999999975322          244667788999999999998887653    2      468999999876544


Q ss_pred             C------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc--cchHHHHHHHHhcCCCC---
Q psy12833        156 Q------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAP---  218 (254)
Q Consensus       156 ~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~~~~~---  218 (254)
                      .            .+...|+.+|.+.+.+++.++.++   |++++.++|+.+.++...  .....+........+.+   
T Consensus       156 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (346)
T 4egb_A          156 LGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYG  232 (346)
T ss_dssp             CCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEET
T ss_pred             CCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeC
Confidence            3            134689999999999999998875   799999999999887542  22233333333322210   


Q ss_pred             -----CCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        219 -----QRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       219 -----~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                           ..+++++|+|++++.++..+. .|+++++.+|..
T Consensus       233 ~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~  270 (346)
T 4egb_A          233 DGLNVRDWLHVTDHCSAIDVVLHKGR-VGEVYNIGGNNE  270 (346)
T ss_dssp             TSCCEECEEEHHHHHHHHHHHHHHCC-TTCEEEECCSCC
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhcCC-CCCEEEECCCCc
Confidence                 234679999999999997654 899999998864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=2e-24  Score=184.18  Aligned_cols=215  Identities=15%  Similarity=0.092  Sum_probs=155.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHH--cCCEEEEeeCCCchh----------HHHHHHhCCCceEEecCCCCHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVR--EGGRVVLCDLPTSEG----------ESVAKELGPDVKFAPVDVTSEEDVQKAV   69 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~--~g~~v~~~~r~~~~~----------~~~~~~~~~~~~~~~~Dls~~~~~~~~~   69 (254)
                      |+++++|||||+|+||++++++|++  +|++|++++|+....          .......+.++.++.+|++|+++++++ 
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-   86 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL-   86 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-
Confidence            4689999999999999999999999  999999999966511          111111245689999999999988887 


Q ss_pred             HHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         70 LLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        70 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                           ...++|+||||||...            .+.++++..+++|+.++.++++++..    .       ..+||++||
T Consensus        87 -----~~~~~D~vih~A~~~~------------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~-------~~~~V~~SS  138 (362)
T 3sxp_A           87 -----EKLHFDYLFHQAAVSD------------TTMLNQELVMKTNYQAFLNLLEIARS----K-------KAKVIYASS  138 (362)
T ss_dssp             -----TTSCCSEEEECCCCCG------------GGCCCHHHHHHHHTHHHHHHHHHHHH----T-------TCEEEEEEE
T ss_pred             -----hccCCCEEEECCccCC------------ccccCHHHHHHHHHHHHHHHHHHHHH----c-------CCcEEEeCc
Confidence                 2348999999999542            23355788899999999999998843    2       245999999


Q ss_pred             cccccCC----------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------cchHHHHHHHHh
Q psy12833        150 IAAYEGQ----------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------MLNEKVRNFLAR  213 (254)
Q Consensus       150 ~~~~~~~----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~~~~~~~  213 (254)
                      ...+...          .+...|+.+|.+.+.+++.++.+     +.+..++|+.+..+...      .....+......
T Consensus       139 ~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~  213 (362)
T 3sxp_A          139 AGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMA  213 (362)
T ss_dssp             GGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHT
T ss_pred             HHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHh
Confidence            6655432          23456999999999999988766     56667777666555432      222333333322


Q ss_pred             cCC--C------CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        214 SIP--A------PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       214 ~~~--~------~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      ..+  .      ...+++++|+|++++.+++.+ .+| .+++.+|..
T Consensus       214 ~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~-~~g-~~~i~~~~~  258 (362)
T 3sxp_A          214 FKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ-KSG-VYNVGYSQA  258 (362)
T ss_dssp             TSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS-SCE-EEEESCSCE
T ss_pred             CCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC-CCC-EEEeCCCCC
Confidence            211  1      024668999999999999865 368 999988764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.92  E-value=5.3e-24  Score=179.57  Aligned_cols=212  Identities=15%  Similarity=0.048  Sum_probs=153.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++++++|||||+|+||++++++|+++|++|++++|+.....+...++ .++.++.+|++|+++++++++..     ++|+
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~   92 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH-PNLTFVEGSIADHALVNQLIGDL-----QPDA   92 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC-TTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc-CCceEEEEeCCCHHHHHHHHhcc-----CCcE
Confidence            35689999999999999999999999999999999765432211111 46889999999999999988752     7999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc----CC-
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE----GQ-  156 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~----~~-  156 (254)
                      ||||||.....           +.++++  +++|+.++.++++++.+.    .      .++||++||...+.    .. 
T Consensus        93 vih~A~~~~~~-----------~~~~~~--~~~N~~~~~~l~~a~~~~----~------~~~iV~~SS~~~~g~~~~~~~  149 (333)
T 2q1w_A           93 VVHTAASYKDP-----------DDWYND--TLTNCVGGSNVVQAAKKN----N------VGRFVYFQTALCYGVKPIQQP  149 (333)
T ss_dssp             EEECCCCCSCT-----------TCHHHH--HHHHTHHHHHHHHHHHHT----T------CSEEEEEEEGGGGCSCCCSSS
T ss_pred             EEECceecCCC-----------ccCChH--HHHHHHHHHHHHHHHHHh----C------CCEEEEECcHHHhCCCcccCC
Confidence            99999975321           123444  999999999999988762    2      47999999987764    21 


Q ss_pred             -------CCC-ccchhchHHHHHhHHH-HHHHhccCCcEEEEEecCCccccccc-cchHHHHHHHHhcCCC-----CCCC
Q psy12833        157 -------SGQ-VAYSASKSGIVGMTLP-MARDLAGAGIRVNTIAPGLFDTPLLS-MLNEKVRNFLARSIPA-----PQRL  221 (254)
Q Consensus       157 -------~~~-~~Y~~sK~a~~~~~~~-la~e~~~~~i~v~~v~Pg~~~t~~~~-~~~~~~~~~~~~~~~~-----~~~~  221 (254)
                             .+. ..|+.+|++.+.+++. ++        .+..++|+.+..+... ...+.+........+.     ...+
T Consensus       150 ~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (333)
T 2q1w_A          150 VRLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDF  221 (333)
T ss_dssp             BCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECE
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEee
Confidence                   234 7899999999999887 64        5566777766554411 1122222222111111     1457


Q ss_pred             CCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        222 GHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       222 ~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      ++++|+|++++++++.+.  |+++++++|..
T Consensus       222 i~v~Dva~ai~~~~~~~~--g~~~~v~~~~~  250 (333)
T 2q1w_A          222 VFVKDLARATVRAVDGVG--HGAYHFSSGTD  250 (333)
T ss_dssp             EEHHHHHHHHHHHHTTCC--CEEEECSCSCC
T ss_pred             EEHHHHHHHHHHHHhcCC--CCEEEeCCCCC
Confidence            899999999999998655  89999998864

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=4.3e-25  Score=177.51  Aligned_cols=199  Identities=14%  Similarity=0.131  Sum_probs=136.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|++|||||+|+||++++++|+++| ++|++++|+.+++++..   ..++.++++|++|+++++++++       ++|++
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v   92 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY---PTNSQIIMGDVLNHAALKQAMQ-------GQDIV   92 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC---CTTEEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc---cCCcEEEEecCCCHHHHHHHhc-------CCCEE
Confidence            3799999999999999999999999 89999999877654322   3578899999999999998887       68999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      |||+|..              ...              ..++.+++.+.+..      .++||++||..++.+.+....+
T Consensus        93 v~~a~~~--------------~~~--------------~~~~~~~~~~~~~~------~~~iV~iSS~~~~~~~~~~~~~  138 (236)
T 3qvo_A           93 YANLTGE--------------DLD--------------IQANSVIAAMKACD------VKRLIFVLSLGIYDEVPGKFVE  138 (236)
T ss_dssp             EEECCST--------------THH--------------HHHHHHHHHHHHTT------CCEEEEECCCCC----------
T ss_pred             EEcCCCC--------------chh--------------HHHHHHHHHHHHcC------CCEEEEEecceecCCCCccccc
Confidence            9999841              111              23557778887765      5799999998877665432111


Q ss_pred             hhchH---HHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy12833        163 SASKS---GIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL  239 (254)
Q Consensus       163 ~~sK~---a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  239 (254)
                      ...+.   ....+ .....++.+.|++++.++||++.++.......     .....+..+++++++|+|+.++++++++.
T Consensus       139 ~~~~~~~~~~~~~-~~~~~~l~~~gi~~~~vrPg~i~~~~~~~~~~-----~~~~~~~~~~~i~~~DvA~~i~~ll~~~~  212 (236)
T 3qvo_A          139 WNNAVIGEPLKPF-RRAADAIEASGLEYTILRPAWLTDEDIIDYEL-----TSRNEPFKGTIVSRKSVAALITDIIDKPE  212 (236)
T ss_dssp             ------CGGGHHH-HHHHHHHHTSCSEEEEEEECEEECCSCCCCEE-----ECTTSCCSCSEEEHHHHHHHHHHHHHSTT
T ss_pred             chhhcccchHHHH-HHHHHHHHHCCCCEEEEeCCcccCCCCcceEE-----eccCCCCCCcEECHHHHHHHHHHHHcCcc
Confidence            11110   00111 11123345679999999999998875432110     01112222677899999999999997543


Q ss_pred             -cccceEEecCCcc
Q psy12833        240 -INGEVIRIDGALR  252 (254)
Q Consensus       240 -~~G~~i~~~gG~~  252 (254)
                       ..|+.+.++++.+
T Consensus       213 ~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          213 KHIGENIGINQPGT  226 (236)
T ss_dssp             TTTTEEEEEECSSC
T ss_pred             cccCeeEEecCCCC
Confidence             5699999998865

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.92  E-value=1.9e-24  Score=180.48  Aligned_cols=213  Identities=19%  Similarity=0.110  Sum_probs=162.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      +++|||||+|+||++++++|+++|++|++++|+.+...+..   ..++.++.+|++|++ +.++++       . |+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vih   68 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---NPSAELHVRDLKDYS-WGAGIK-------G-DVVFH   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---CTTSEEECCCTTSTT-TTTTCC-------C-SEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---CCCceEEECccccHH-HHhhcC-------C-CEEEE
Confidence            37999999999999999999999999999999876544322   467899999999987 655443       3 99999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC---------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG---------  155 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~---------  155 (254)
                      ||+.....          .+.++++..+++|+.++.++++++...    .      .++||++||...+..         
T Consensus        69 ~A~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~------~~~iv~~SS~~vyg~~~~~~~~e~  128 (312)
T 3ko8_A           69 FAANPEVR----------LSTTEPIVHFNENVVATFNVLEWARQT----G------VRTVVFASSSTVYGDADVIPTPEE  128 (312)
T ss_dssp             CCSSCSSS----------GGGSCHHHHHHHHHHHHHHHHHHHHHH----T------CCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             CCCCCCch----------hhhhCHHHHHHHHHHHHHHHHHHHHHc----C------CCEEEEeCcHHHhCCCCCCCCCCC
Confidence            99953221          345667888999999999999987542    2      468999999876632         


Q ss_pred             --CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-chHHHHHHHHhc-CC--CC------CCCCC
Q psy12833        156 --QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-LNEKVRNFLARS-IP--AP------QRLGH  223 (254)
Q Consensus       156 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~-~~--~~------~~~~~  223 (254)
                        ..+...|+.+|.+.+.+++.++.++   |++++.++|+.+.++.... ............ .+  ..      ..+++
T Consensus       129 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  205 (312)
T 3ko8_A          129 EPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLY  205 (312)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEE
Confidence              3346789999999999999999887   8999999999999886432 122222222221 11  00      24668


Q ss_pred             HHHHHHHHHHHhcC---CCcccceEEecCCcc
Q psy12833        224 PDEFAQLVQSIITN---PLINGEVIRIDGALR  252 (254)
Q Consensus       224 ~~~va~~~~~l~~~---~~~~G~~i~~~gG~~  252 (254)
                      ++|+|++++.++..   +...|+++++.+|..
T Consensus       206 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~  237 (312)
T 3ko8_A          206 VRDAVEATLAAWKKFEEMDAPFLALNVGNVDA  237 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSEEEEEESCSSC
T ss_pred             HHHHHHHHHHHHHhccccCCCCcEEEEcCCCc
Confidence            99999999999975   567899999988754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.92  E-value=4.6e-24  Score=182.91  Aligned_cols=218  Identities=16%  Similarity=0.090  Sum_probs=161.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++++++|||||+|+||++++++|+++| ++|++++|+.+...+... ...++.++.+|++|++++.++++       ++|
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~-~~~~v~~~~~Dl~d~~~l~~~~~-------~~d  101 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-DHPAVRFSETSITDDALLASLQD-------EYD  101 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC-CCTTEEEECSCTTCHHHHHHCCS-------CCS
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc-CCCceEEEECCCCCHHHHHHHhh-------CCC
Confidence            457899999999999999999999999 999999997654321111 13568899999999998877665       799


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-cCCCCCCCcEEEEEecccccc-----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHEN-KLNEDGLRGVIINTASIAAYE-----  154 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~~ii~vss~~~~~-----  154 (254)
                      +|||||+.....          .+.++++..+++|+.++.++++++..    . .      .+++|++||...+.     
T Consensus       102 ~Vih~A~~~~~~----------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~------~~~~V~~SS~~vyg~~~~~  161 (377)
T 2q1s_A          102 YVFHLATYHGNQ----------SSIHDPLADHENNTLTTLKLYERLKH----FKR------LKKVVYSAAGCSIAEKTFD  161 (377)
T ss_dssp             EEEECCCCSCHH----------HHHHCHHHHHHHHTHHHHHHHHHHTT----CSS------CCEEEEEEEC---------
T ss_pred             EEEECCCccCch----------hhhhCHHHHHHHHHHHHHHHHHHHHH----hCC------CCeEEEeCCHHHcCCCCCC
Confidence            999999964321          13456788899999999999887742    2 2      46899999976431     


Q ss_pred             -----------CC-CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc---------c------cchHHH
Q psy12833        155 -----------GQ-SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL---------S------MLNEKV  207 (254)
Q Consensus       155 -----------~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~---------~------~~~~~~  207 (254)
                                 +. .+...|+.+|.+.+.+++.++.++   |++++.++||.+.++..         .      .....+
T Consensus       162 ~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~  238 (377)
T 2q1s_A          162 DAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTF  238 (377)
T ss_dssp             -----CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHH
T ss_pred             CcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHH
Confidence                       22 445789999999999999998765   79999999999988765         2      222333


Q ss_pred             HHHHHhcCCC--C------CCCCCHHHHHHH-HHHHhcCCCcccceEEecCCcc
Q psy12833        208 RNFLARSIPA--P------QRLGHPDEFAQL-VQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       208 ~~~~~~~~~~--~------~~~~~~~~va~~-~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      ........+.  +      ..+++++|+|++ ++.++..+. +| .+++.+|..
T Consensus       239 ~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~-~g-~~~i~~~~~  290 (377)
T 2q1s_A          239 IYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP-GG-VYNIASGKE  290 (377)
T ss_dssp             HHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT-TE-EEECCCCCC
T ss_pred             HHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC-CC-eEEecCCCc
Confidence            3333332221  1      235679999999 999997654 78 999988753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.92  E-value=1.3e-23  Score=177.88  Aligned_cols=222  Identities=17%  Similarity=0.119  Sum_probs=161.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch----------hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE----------GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~----------~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      ++++|||||+|+||++++++|+++|++|++++|+...          .+++.+..+.++.++.+|++|++++++++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            4799999999999999999999999999999885432          22222223567899999999999998888753 


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY  153 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~  153 (254)
                          ++|+||||||.....          ...++++..+++|+.++.++++++..    ..      .++||++||...+
T Consensus        81 ----~~d~vih~A~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~~~iv~~SS~~~~  136 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAVG----------ESVQKPLDYYRVNLTGTIQLLEIMKA----HG------VKNLVFSSSATVY  136 (348)
T ss_dssp             ----CEEEEEECCSCCCHH----------HHHHCHHHHHHHHHHHHHHHHHHHHH----TT------CCEEEEEEEGGGG
T ss_pred             ----CCCEEEECCCCcCcc----------chhhchHHHHHHHHHHHHHHHHHHHH----hC------CCEEEEECcHHHh
Confidence                799999999964321          13356678899999999999886543    22      4699999998765


Q ss_pred             cC------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc------------ccchHHHHH
Q psy12833        154 EG------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRN  209 (254)
Q Consensus       154 ~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~------------~~~~~~~~~  209 (254)
                      ..            .|....|+.+|++.+.+++.++.+  ..++++..++|+.+..+..            ....+.+..
T Consensus       137 g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~  214 (348)
T 1ek6_A          137 GNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQ  214 (348)
T ss_dssp             CSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHH
T ss_pred             CCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHH
Confidence            32            122678999999999999999887  3469999999988765521            112223333


Q ss_pred             HHH-hcCC-----------C---CCCCCCHHHHHHHHHHHhcCC-Cccc-ceEEecCCcc
Q psy12833        210 FLA-RSIP-----------A---PQRLGHPDEFAQLVQSIITNP-LING-EVIRIDGALR  252 (254)
Q Consensus       210 ~~~-~~~~-----------~---~~~~~~~~~va~~~~~l~~~~-~~~G-~~i~~~gG~~  252 (254)
                      ... ...+           .   ...+++++|+|++++.++..+ ...| +.+++.+|..
T Consensus       215 ~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~  274 (348)
T 1ek6_A          215 VAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG  274 (348)
T ss_dssp             HHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC
T ss_pred             HHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCC
Confidence            322 1111           1   024678999999999999642 1344 8999987753

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.92  E-value=1.9e-24  Score=188.22  Aligned_cols=213  Identities=18%  Similarity=0.135  Sum_probs=156.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc---hhHHHHH------------HhCCCceEEecCCCCHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS---EGESVAK------------ELGPDVKFAPVDVTSEEDVQK   67 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~---~~~~~~~------------~~~~~~~~~~~Dls~~~~~~~   67 (254)
                      +++++|||||+|+||++++++|+++|++|++++|+.+   ..+++.+            ....++.++.+|++|++++. 
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  146 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  146 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence            4679999999999999999999999999999999887   2222222            12468999999999988777 


Q ss_pred             HHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEE
Q psy12833         68 AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINT  147 (254)
Q Consensus        68 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~v  147 (254)
                             ..+++|+|||||+...             ..++++..+++|+.++.++++++.+   .        .+++|++
T Consensus       147 -------~~~~~d~Vih~A~~~~-------------~~~~~~~~~~~Nv~g~~~l~~aa~~---~--------~~~~v~~  195 (427)
T 4f6c_A          147 -------LPENMDTIIHAGARTD-------------HFGDDDEFEKVNVQGTVDVIRLAQQ---H--------HARLIYV  195 (427)
T ss_dssp             -------CSSCCSEEEECCCCC--------------------CHHHHHHHHHHHHHHHHHH---T--------TCEEEEE
T ss_pred             -------CcCCCCEEEECCcccC-------------CCCCHHHHHHHHHHHHHHHHHHHHh---c--------CCcEEEE
Confidence                   4568999999999642             2356778899999999999999877   1        4689999


Q ss_pred             ecccc--c----------------cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------
Q psy12833        148 ASIAA--Y----------------EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------  203 (254)
Q Consensus       148 ss~~~--~----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------  203 (254)
                      ||...  .                .+..+...|+.+|.+.+.+++.++.    .|++++.++||.+.++.....      
T Consensus       196 SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~  271 (427)
T 4f6c_A          196 STISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIK  271 (427)
T ss_dssp             EEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGG
T ss_pred             CchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcc
Confidence            99887  0                0122567999999999999988653    689999999999987754321      


Q ss_pred             ---hHHHHHHHHhcCCC-------CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        204 ---NEKVRNFLARSIPA-------PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       204 ---~~~~~~~~~~~~~~-------~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                         ............+.       ...+++++|+|++++.++..+. .|+++++++|..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~-~g~~~~l~~~~~  329 (427)
T 4f6c_A          272 TNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSPNK  329 (427)
T ss_dssp             GCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC-CCSEEEESCSCC
T ss_pred             hHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC-CCCEEEecCCCC
Confidence               12222222221111       1347789999999999998665 899999998864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.92  E-value=1.5e-25  Score=178.85  Aligned_cols=207  Identities=11%  Similarity=-0.015  Sum_probs=155.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |.+-+++|||||+|+||++++++|+++|++|++++|+.+..+..    ..++.++.+|++|++++.++++       ++|
T Consensus         1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d   69 (227)
T 3dhn_A            1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE----NEHLKVKKADVSSLDEVCEVCK-------GAD   69 (227)
T ss_dssp             --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC----CTTEEEECCCTTCHHHHHHHHT-------TCS
T ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc----cCceEEEEecCCCHHHHHHHhc-------CCC
Confidence            33347999999999999999999999999999999987765432    3578999999999999988887       689


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ----  156 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~----  156 (254)
                      +||||||....            .    ...+++|+.+..++++++..    ..      .+++|++||..+..+.    
T Consensus        70 ~vi~~a~~~~~------------~----~~~~~~n~~~~~~l~~~~~~----~~------~~~~v~~Ss~~~~~~~~~~~  123 (227)
T 3dhn_A           70 AVISAFNPGWN------------N----PDIYDETIKVYLTIIDGVKK----AG------VNRFLMVGGAGSLFIAPGLR  123 (227)
T ss_dssp             EEEECCCC----------------------CCSHHHHHHHHHHHHHHH----TT------CSEEEEECCSTTSEEETTEE
T ss_pred             EEEEeCcCCCC------------C----hhHHHHHHHHHHHHHHHHHH----hC------CCEEEEeCChhhccCCCCCc
Confidence            99999985310            1    12577899998888877654    22      4689999998765433    


Q ss_pred             ------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCC----CCCCCCHHH
Q psy12833        157 ------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA----PQRLGHPDE  226 (254)
Q Consensus       157 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  226 (254)
                            .+...|+.+|.+.+.+.+.++.   ..+++++.++||.+.++......-.    .....+.    ...+++++|
T Consensus       124 ~~~~~~~p~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~i~~~D  196 (227)
T 3dhn_A          124 LMDSGEVPENILPGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYR----LGKDDMIVDIVGNSHISVED  196 (227)
T ss_dssp             GGGTTCSCGGGHHHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCE----EESSBCCCCTTSCCEEEHHH
T ss_pred             cccCCcchHHHHHHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCcccccee----ecCCCcccCCCCCcEEeHHH
Confidence                  2367899999999988887765   4589999999999977643211000    0011111    033678999


Q ss_pred             HHHHHHHHhcCCCcccceEEecCCc
Q psy12833        227 FAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       227 va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      +|++++.++.++...|+.+.+.+..
T Consensus       197 va~ai~~~l~~~~~~g~~~~~~~~~  221 (227)
T 3dhn_A          197 YAAAMIDELEHPKHHQERFTIGYLE  221 (227)
T ss_dssp             HHHHHHHHHHSCCCCSEEEEEECCS
T ss_pred             HHHHHHHHHhCccccCcEEEEEeeh
Confidence            9999999999888899999987754

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.92  E-value=2.2e-24  Score=182.03  Aligned_cols=217  Identities=18%  Similarity=0.155  Sum_probs=153.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH--HhC---CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK--ELG---PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~--~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+..++...  ++.   .++.++.+|++|++++.++++       
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   76 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK-------   76 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-------
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-------
Confidence            57899999999999999999999999999999998764433221  121   247889999999998888775       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-  156 (254)
                      ++|+|||+|+...   +        ...+.....+++|+.++.++++++.+..   .      .++||++||..+..+. 
T Consensus        77 ~~d~Vih~A~~~~---~--------~~~~~~~~~~~~nv~gt~~ll~a~~~~~---~------~~riV~~SS~~~~~~~~  136 (337)
T 2c29_D           77 GCTGVFHVATPMD---F--------ESKDPENEVIKPTIEGMLGIMKSCAAAK---T------VRRLVFTSSAGTVNIQE  136 (337)
T ss_dssp             TCSEEEECCCCCC---S--------SCSSHHHHTHHHHHHHHHHHHHHHHHHS---C------CCEEEEECCGGGTSCSS
T ss_pred             CCCEEEEeccccC---C--------CCCChHHHHHHHHHHHHHHHHHHHHhCC---C------ccEEEEeeeHhhcccCC
Confidence            6899999998531   1        1112235688999999999999887642   1      3689999998754321 


Q ss_pred             ---------------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-chHHHHHH---H
Q psy12833        157 ---------------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-LNEKVRNF---L  211 (254)
Q Consensus       157 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~~~~~~~~---~  211 (254)
                                           ++...|+.+|.+.+.+++.++.+   +|++++.++|+.+.++.... ........   .
T Consensus       137 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~  213 (337)
T 2c29_D          137 HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPI  213 (337)
T ss_dssp             SCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHH
T ss_pred             CCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHH
Confidence                                 12336999999999988777654   48999999999998886432 11111111   1


Q ss_pred             Hh------cCCCCCCCCCHHHHHHHHHHHhcCCCcccceEEecCC
Q psy12833        212 AR------SIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       212 ~~------~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      ..      ..+. .++++++|+|++++++++.+...|.++..+++
T Consensus       214 ~g~~~~~~~~~~-~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~  257 (337)
T 2c29_D          214 TGNEAHYSIIRQ-GQFVHLDDLCNAHIYLFENPKAEGRYICSSHD  257 (337)
T ss_dssp             HTCGGGHHHHTE-EEEEEHHHHHHHHHHHHHCTTCCEEEEECCEE
T ss_pred             cCCCccccccCC-CCEEEHHHHHHHHHHHhcCcccCceEEEeCCC
Confidence            11      0112 45889999999999999766566765433443

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.92  E-value=4.9e-24  Score=180.22  Aligned_cols=221  Identities=19%  Similarity=0.224  Sum_probs=159.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-------CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG-------GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      |+++++|||||+|+||++++++|+++|       ++|++++|+.+....   ....++.++.+|++|+++++++++    
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----   84 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---GFSGAVDARAADLSAPGEAEKLVE----   84 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---TCCSEEEEEECCTTSTTHHHHHHH----
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---ccCCceeEEEcCCCCHHHHHHHHh----
Confidence            578899999999999999999999999       899999998654322   123568889999999999888875    


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                        +++|+||||||....           .+.++++..+++|+.++.++++++.+...+..     ..++||++||...+.
T Consensus        85 --~~~d~vih~A~~~~~-----------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-----~~~~iv~~SS~~~~~  146 (342)
T 2hrz_A           85 --ARPDVIFHLAAIVSG-----------EAELDFDKGYRINLDGTRYLFDAIRIANGKDG-----YKPRVVFTSSIAVFG  146 (342)
T ss_dssp             --TCCSEEEECCCCCHH-----------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHC-----CCCEEEEEEEGGGCC
T ss_pred             --cCCCEEEECCccCcc-----------cccccHHHHHHHHHHHHHHHHHHHHhcccccC-----CCcEEEEeCchHhhC
Confidence              379999999996421           23467888999999999999998877543210     036899999997765


Q ss_pred             CC-C----------CCccchhchHHHHHhHHHHHHHh--ccCCcEEEEEe--cCCccccccccchHHHHHHHHhc----C
Q psy12833        155 GQ-S----------GQVAYSASKSGIVGMTLPMARDL--AGAGIRVNTIA--PGLFDTPLLSMLNEKVRNFLARS----I  215 (254)
Q Consensus       155 ~~-~----------~~~~Y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~--Pg~~~t~~~~~~~~~~~~~~~~~----~  215 (254)
                      +. +          +...|+.+|++.+.+++.++.++  ....+|+..++  ||...++.... ...........    +
T Consensus       147 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~-~~~~~~~~~~~~~~~~  225 (342)
T 2hrz_A          147 APLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGF-FSNILREPLVGQEAVL  225 (342)
T ss_dssp             SSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGH-HHHHHHHHHTTCCEEE
T ss_pred             CCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHH-HHHHHHHHhcCCCeec
Confidence            43 2          56789999999999999988764  22346676666  88766543222 12222222221    1


Q ss_pred             CCCC----CCCCHHHHHHHHHHHhcCCC---cccceEEec
Q psy12833        216 PAPQ----RLGHPDEFAQLVQSIITNPL---INGEVIRID  248 (254)
Q Consensus       216 ~~~~----~~~~~~~va~~~~~l~~~~~---~~G~~i~~~  248 (254)
                      +..+    .+.+++|+|+.++.++..+.   ..|+++++.
T Consensus       226 ~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          226 PVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             CSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             cCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence            2101    14689999999999997542   246788884

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.92  E-value=5.5e-24  Score=179.55  Aligned_cols=215  Identities=20%  Similarity=0.210  Sum_probs=161.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc---C---CEEEEeeCCCc--hhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVRE---G---GRVVLCDLPTS--EGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~---g---~~v~~~~r~~~--~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++|||||+|+||++++++|+++   |   ++|++++|+..  ..+.+ +++  ..++.++.+|++|++++++++      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcccCCCeEEEEcCCCCHHHHHHHh------
Confidence            6999999999999999999997   8   99999998642  11111 122  357889999999999888777      


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-  154 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-  154 (254)
                       .++|+||||||.....          .+.++++..+++|+.++.++++++.+..          .++||++||...+. 
T Consensus        75 -~~~d~Vih~A~~~~~~----------~~~~~~~~~~~~Nv~~~~~l~~a~~~~~----------~~~~v~~SS~~vyg~  133 (337)
T 1r6d_A           75 -RGVDAIVHFAAESHVD----------RSIAGASVFTETNVQGTQTLLQCAVDAG----------VGRVVHVSTNQVYGS  133 (337)
T ss_dssp             -TTCCEEEECCSCCCHH----------HHHHCCHHHHHHHTHHHHHHHHHHHHTT----------CCEEEEEEEGGGGCC
T ss_pred             -cCCCEEEECCCccCch----------hhhhCHHHHHHHHHHHHHHHHHHHHHcC----------CCEEEEecchHHhCC
Confidence             3899999999964311          1334567889999999999999887641          36899999976543 


Q ss_pred             ----------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc--cchHHHHHHHHhcCCC-----
Q psy12833        155 ----------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPA-----  217 (254)
Q Consensus       155 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~~~~-----  217 (254)
                                +..+...|+.+|.+.+.+++.++.++   |++++.++|+.+.++...  ...+.+........+.     
T Consensus       134 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (337)
T 1r6d_A          134 IDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGD  210 (337)
T ss_dssp             CSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETT
T ss_pred             CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCC
Confidence                      23456789999999999999998875   799999999999887643  1222222322222110     


Q ss_pred             ---CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 ---PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 ---~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                         ...+++++|+|++++.++..+ .+|+++++.+|..
T Consensus       211 ~~~~~~~i~v~Dva~a~~~~~~~~-~~g~~~~v~~~~~  247 (337)
T 1r6d_A          211 GANVREWVHTDDHCRGIALVLAGG-RAGEIYHIGGGLE  247 (337)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECCCCE
T ss_pred             CCeeEeeEeHHHHHHHHHHHHhCC-CCCCEEEeCCCCC
Confidence               024678999999999999754 3799999998863

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.92  E-value=2.6e-24  Score=175.98  Aligned_cols=191  Identities=19%  Similarity=0.192  Sum_probs=149.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++|||||+|+||++++++|+++|++|++++|+.....      ..++.++.+|++|++++.++++       ++|+|||
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~   69 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------EAHEEIVACDLADAQAVHDLVK-------DCDGIIH   69 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------CTTEEECCCCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------CCCccEEEccCCCHHHHHHHHc-------CCCEEEE
Confidence            68999999999999999999999999999999875421      1357889999999999888876       6899999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC-------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-------  157 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~-------  157 (254)
                      |||...              .++++..+++|+.++.++++++.+    ..      .++||++||...+.+.+       
T Consensus        70 ~a~~~~--------------~~~~~~~~~~n~~~~~~l~~a~~~----~~------~~~iv~~SS~~~~~~~~~~~~~~E  125 (267)
T 3ay3_A           70 LGGVSV--------------ERPWNDILQANIIGAYNLYEAARN----LG------KPRIVFASSNHTIGYYPRTTRIDT  125 (267)
T ss_dssp             CCSCCS--------------CCCHHHHHHHTHHHHHHHHHHHHH----TT------CCEEEEEEEGGGSTTSBTTSCBCT
T ss_pred             CCcCCC--------------CCCHHHHHHHHHHHHHHHHHHHHH----hC------CCEEEEeCCHHHhCCCCCCCCCCC
Confidence            999641              133577899999999999998764    22      47999999987664432       


Q ss_pred             -----CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCc-cccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        158 -----GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF-DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       158 -----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                           +...|+.+|++.+.+++.++.   ..|++++.++||.+ .++..    ..   ..       ..+++++|+|+.+
T Consensus       126 ~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~----~~---~~-------~~~~~~~dva~~~  188 (267)
T 3ay3_A          126 EVPRRPDSLYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKD----AR---MM-------ATWLSVDDFMRLM  188 (267)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCS----HH---HH-------HHBCCHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCC----CC---ee-------eccccHHHHHHHH
Confidence                 357899999999999998764   45899999999998 44321    11   00       3457999999999


Q ss_pred             HHHhcCCCcccceEEecC
Q psy12833        232 QSIITNPLINGEVIRIDG  249 (254)
Q Consensus       232 ~~l~~~~~~~G~~i~~~g  249 (254)
                      ..++..+...++.+.+.+
T Consensus       189 ~~~~~~~~~~~~~~~~~~  206 (267)
T 3ay3_A          189 KRAFVAPKLGCTVVYGAS  206 (267)
T ss_dssp             HHHHHSSCCCEEEEEECC
T ss_pred             HHHHhCCCCCceeEecCC
Confidence            999976544345555543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.92  E-value=1.9e-23  Score=179.25  Aligned_cols=223  Identities=13%  Similarity=0.057  Sum_probs=158.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-----hHHHHHHh---CC-CceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-----GESVAKEL---GP-DVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~~---~~-~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+..+.   +. ++.++.+|++|++++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999997654     22221111   22 6889999999999999998876   


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-  154 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-  154 (254)
                        ++|+||||||.....          .+.++++..+++|+.++.++++++.+...++..     .++||++||...+. 
T Consensus       106 --~~d~Vih~A~~~~~~----------~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~-----~~~~v~~SS~~vyg~  168 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHVA----------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-----TVKYYQAGSSEMFGS  168 (381)
T ss_dssp             --CCSEEEECCSCCCHH----------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-----CCEEEEEEEGGGGTT
T ss_pred             --CCCEEEECCcccCcc----------ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC-----ccEEEEeCcHHHhCC
Confidence              799999999964321          234667889999999999999999987755310     36999999987654 


Q ss_pred             ---------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEE------EEecCCccccccccchHHHHHHHHhcCC---
Q psy12833        155 ---------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVN------TIAPGLFDTPLLSMLNEKVRNFLARSIP---  216 (254)
Q Consensus       155 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~------~v~Pg~~~t~~~~~~~~~~~~~~~~~~~---  216 (254)
                               +..+...|+.+|++.+.+++.++.++   ++.+.      .+.||...+.....+............+   
T Consensus       169 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~  245 (381)
T 1n7h_A          169 TPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLF  245 (381)
T ss_dssp             SCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEE
T ss_pred             CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEE
Confidence                     23456789999999999999998876   34333      3344433322111111111111111111   


Q ss_pred             -----CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        217 -----APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       217 -----~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                           ....+++++|+|++++.+++.+.  ++.+++.+|..
T Consensus       246 ~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~i~~~~~  284 (381)
T 1n7h_A          246 LGNLQASRDWGFAGDYVEAMWLMLQQEK--PDDYVVATEEG  284 (381)
T ss_dssp             ESCTTCEEECEEHHHHHHHHHHHHTSSS--CCEEEECCSCE
T ss_pred             eCCCCceeeeEEHHHHHHHHHHHHhCCC--CCeEEeeCCCC
Confidence                 01347799999999999997653  57899988753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.91  E-value=1.3e-23  Score=175.64  Aligned_cols=212  Identities=13%  Similarity=0.087  Sum_probs=157.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      +++|||||+|+||++++++|+++|..|++..|+....+.    ....+.++.+|++| +++.++++       ++|++||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~----~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vih   69 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF----VNEAARLVKADLAA-DDIKDYLK-------GAEEVWH   69 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG----SCTTEEEECCCTTT-SCCHHHHT-------TCSEEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh----cCCCcEEEECcCCh-HHHHHHhc-------CCCEEEE
Confidence            479999999999999999999999555555554443322    24578899999999 88887776       7999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc----------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE----------  154 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~----------  154 (254)
                      +|+....    .      .+.++++..+++|+.++.++++++..    ..      .++||++||...+.          
T Consensus        70 ~a~~~~~----~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~------~~~iv~~SS~~vyg~~~~~~~~E~  129 (313)
T 3ehe_A           70 IAANPDV----R------IGAENPDEIYRNNVLATYRLLEAMRK----AG------VSRIVFTSTSTVYGEAKVIPTPED  129 (313)
T ss_dssp             CCCCCCC----C-------CCCCHHHHHHHHHHHHHHHHHHHHH----HT------CCEEEEECCGGGGCSCSSSSBCTT
T ss_pred             CCCCCCh----h------hhhhCHHHHHHHHHHHHHHHHHHHHH----cC------CCeEEEeCchHHhCcCCCCCCCCC
Confidence            9985321    1      34567788999999999999888543    22      46999999987663          


Q ss_pred             -CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-chHHHHHHHHhc-CC-----C---CCCCCC
Q psy12833        155 -GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-LNEKVRNFLARS-IP-----A---PQRLGH  223 (254)
Q Consensus       155 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~-~~-----~---~~~~~~  223 (254)
                       +..+...|+.+|.+.+.+++.++.++   |++++.++|+.+.++.... ............ .+     .   ...+++
T Consensus       130 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  206 (313)
T 3ehe_A          130 YPTHPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIY  206 (313)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEE
Confidence             33456789999999999999999875   7999999999998875432 112222222221 11     1   034679


Q ss_pred             HHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        224 PDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       224 ~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      ++|+|++++.++. +...|+++++.+|..
T Consensus       207 v~Dva~a~~~~~~-~~~~~~~~ni~~~~~  234 (313)
T 3ehe_A          207 ISDCVDAMLFGLR-GDERVNIFNIGSEDQ  234 (313)
T ss_dssp             HHHHHHHHHHHTT-CCSSEEEEECCCSCC
T ss_pred             HHHHHHHHHHHhc-cCCCCceEEECCCCC
Confidence            9999999999998 445789999988753

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=3.4e-23  Score=178.42  Aligned_cols=169  Identities=21%  Similarity=0.160  Sum_probs=133.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHH-HcCCEEEEeeCCCch---------hHHHH---HHhC-----CC---ceEEecCCCCH
Q psy12833          4 GVVGLVTGGASGLGKATVERIV-REGGRVVLCDLPTSE---------GESVA---KELG-----PD---VKFAPVDVTSE   62 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~-~~g~~v~~~~r~~~~---------~~~~~---~~~~-----~~---~~~~~~Dls~~   62 (254)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+.+.   +++.     .+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999987554         23332   2221     24   88999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCc
Q psy12833         63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRG  142 (254)
Q Consensus        63 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~  142 (254)
                      +++.+++++    ++++|+||||||.....          .+.++++..+++|+.++.++++++..    ..      .+
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~----------~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~------~~  137 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG----------ESVRDPLKYYDNNVVGILRLLQAMLL----HK------CD  137 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH----------HHHHCHHHHHHHHHHHHHHHHHHHHH----TT------CC
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC----------cchhhHHHHHHHHhHHHHHHHHHHHH----hC------CC
Confidence            998888764    45699999999964321          13456788999999999999987543    22      46


Q ss_pred             EEEEEeccccccCCC------------------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccc
Q psy12833        143 VIINTASIAAYEGQS------------------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL  199 (254)
Q Consensus       143 ~ii~vss~~~~~~~~------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~  199 (254)
                      +||++||...+....                  +...|+.+|++.+.+++.++.++   |++++.++|+.+..+.
T Consensus       138 ~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          138 KIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             EEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             EEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            899999976653322                  25789999999999999999887   8999999999987663

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.91  E-value=2.8e-23  Score=177.59  Aligned_cols=216  Identities=17%  Similarity=0.167  Sum_probs=163.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCC-CHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT-SEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls-~~~~~~~~~~~~~~~~~~i   79 (254)
                      |+++++|||||+|+||++++++|+++ |++|++++|+.+......+  ..++.++.+|++ |.+++.++++       ++
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~~d~~~~~~~~~-------~~   92 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK--HERMHFFEGDITINKEWVEYHVK-------KC   92 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG--STTEEEEECCTTTCHHHHHHHHH-------HC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc--CCCeEEEeCccCCCHHHHHHHhc-------cC
Confidence            45689999999999999999999998 9999999998876654432  357899999999 9999988887       58


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC---
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ---  156 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~---  156 (254)
                      |+|||+|+.....          ...++....+++|+.++.++++++...           .+++|++||...+...   
T Consensus        93 d~Vih~A~~~~~~----------~~~~~~~~~~~~nv~~~~~ll~a~~~~-----------~~~~v~~SS~~vyg~~~~~  151 (372)
T 3slg_A           93 DVILPLVAIATPA----------TYVKQPLRVFELDFEANLPIVRSAVKY-----------GKHLVFPSTSEVYGMCADE  151 (372)
T ss_dssp             SEEEECBCCCCHH----------HHHHCHHHHHHHHTTTTHHHHHHHHHH-----------TCEEEEECCGGGGBSCCCS
T ss_pred             CEEEEcCccccHH----------HHhhCHHHHHHHHHHHHHHHHHHHHHh-----------CCcEEEeCcHHHhCCCCCC
Confidence            9999999975422          123455678899999999998887653           2489999997655331   


Q ss_pred             ---------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----------chHHHHHHH
Q psy12833        157 ---------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----------LNEKVRNFL  211 (254)
Q Consensus       157 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----------~~~~~~~~~  211 (254)
                                     .+...|+.+|.+.+.+++.++.+    |++++.++|+.+..+....          ....+....
T Consensus       152 ~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  227 (372)
T 3slg_A          152 QFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHI  227 (372)
T ss_dssp             SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHH
T ss_pred             CCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHH
Confidence                           23337999999999999988765    8999999999997775321          222333333


Q ss_pred             HhcCCC--C------CCCCCHHHHHHHHHHHhcCCC--cccceEEecC-Cc
Q psy12833        212 ARSIPA--P------QRLGHPDEFAQLVQSIITNPL--INGEVIRIDG-AL  251 (254)
Q Consensus       212 ~~~~~~--~------~~~~~~~~va~~~~~l~~~~~--~~G~~i~~~g-G~  251 (254)
                      ....+.  +      ..+++++|+|++++.++..+.  ..|+++++.+ |.
T Consensus       228 ~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~  278 (372)
T 3slg_A          228 VRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNN  278 (372)
T ss_dssp             HHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTC
T ss_pred             HcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCC
Confidence            222211  0      246789999999999997654  6899999988 43

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.91  E-value=1.2e-23  Score=175.86  Aligned_cols=208  Identities=16%  Similarity=0.137  Sum_probs=125.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++++|||||+|+||++++++|+++|++|++++|+.+.         .+  ++.+|++|++++.++++..     ++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~--~~~~Dl~d~~~~~~~~~~~-----~~d~vi   65 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------PK--FEQVNLLDSNAVHHIIHDF-----QPHVIV   65 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------CHHHHHHH-----CCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------CC--eEEecCCCHHHHHHHHHhh-----CCCEEE
Confidence            5799999999999999999999999999999987543         12  6889999999999988865     799999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC--------
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--------  155 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~--------  155 (254)
                      ||||.....          .+.++++..+++|+.++.++++++.+.           ..++|++||...+.+        
T Consensus        66 h~A~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~a~~~~-----------~~~~v~~SS~~v~~~~~~~~~E~  124 (315)
T 2ydy_A           66 HCAAERRPD----------VVENQPDAASQLNVDASGNLAKEAAAV-----------GAFLIYISSDYVFDGTNPPYREE  124 (315)
T ss_dssp             ECC-----------------------------CHHHHHHHHHHHHH-----------TCEEEEEEEGGGSCSSSCSBCTT
T ss_pred             ECCcccChh----------hhhcCHHHHHHHHHHHHHHHHHHHHHc-----------CCeEEEEchHHHcCCCCCCCCCC
Confidence            999964321          245677889999999999999988762           248999999887654        


Q ss_pred             --CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHH-hcCC------CCCCCCCHHH
Q psy12833        156 --QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLA-RSIP------APQRLGHPDE  226 (254)
Q Consensus       156 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~  226 (254)
                        ..+...|+.+|++.+.+++.++.++  ..+|.+.++ |..+++.. .....+..... ...+      ....+++++|
T Consensus       125 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  200 (315)
T 2ydy_A          125 DIPAPLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEE-SAVTVMFDKVQFSNKSANMDHWQQRFPTHVKD  200 (315)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGG-STTGGGHHHHHCCSSCEEEECSSBBCCEEHHH
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccc-cHHHHHHHHHHhcCCCeeeccCceECcEEHHH
Confidence              3456789999999999998875332  123444444 43333110 11111112222 1111      1146779999


Q ss_pred             HHHHHHHHhcC---CCcccceEEecCCcc
Q psy12833        227 FAQLVQSIITN---PLINGEVIRIDGALR  252 (254)
Q Consensus       227 va~~~~~l~~~---~~~~G~~i~~~gG~~  252 (254)
                      +|++++.+++.   ....|+.+++.+|..
T Consensus       201 va~a~~~~~~~~~~~~~~~~~~~i~~~~~  229 (315)
T 2ydy_A          201 VATVCRQLAEKRMLDPSIKGTFHWSGNEQ  229 (315)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEECCCSCC
T ss_pred             HHHHHHHHHHhhccccCCCCeEEEcCCCc
Confidence            99999999964   246789999998864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=8.5e-23  Score=174.78  Aligned_cols=220  Identities=16%  Similarity=0.067  Sum_probs=157.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-----hHHHHHH----hCCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-----GESVAKE----LGPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~----~~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.++    ...++.++.+|++|++++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999997653     2222111    1346889999999999999998876   


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                        ++|+||||||.....          .+.++++..+++|+.++.++++++.+...+.       .++||++||...+..
T Consensus       102 --~~d~vih~A~~~~~~----------~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~-------~~~iv~~SS~~~~~~  162 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHVK----------ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN-------SVKFYQASTSELYGK  162 (375)
T ss_dssp             --CCSEEEECCSCCCHH----------HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT-------TCEEEEEEEGGGTCS
T ss_pred             --CCCEEEECCCccccc----------ccccCHHHHHHHHHHHHHHHHHHHHHhCCCc-------cceEEEecchhhhCC
Confidence              799999999964311          1345678899999999999999987654311       269999999877642


Q ss_pred             -----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-c-h---HHHHHHH-HhcCC--
Q psy12833        156 -----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-L-N---EKVRNFL-ARSIP--  216 (254)
Q Consensus       156 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~-~---~~~~~~~-~~~~~--  216 (254)
                                 ..+...|+.+|++.+.+++.++.++   ++.+..+.|..+..+.... . .   ....... ....+  
T Consensus       163 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~  239 (375)
T 1t2a_A          163 VQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECF  239 (375)
T ss_dssp             CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCE
T ss_pred             CCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCcee
Confidence                       2245789999999999999998865   5777777776655443211 1 1   1111111 12111  


Q ss_pred             -C-----CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        217 -A-----PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       217 -~-----~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                       .     ...+++++|+|++++.++..+.  ++.+++.+|.
T Consensus       240 ~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~~~  278 (375)
T 1t2a_A          240 SLGNLDAKRDWGHAKDYVEAMWLMLQNDE--PEDFVIATGE  278 (375)
T ss_dssp             EESCTTCEECCEEHHHHHHHHHHHHHSSS--CCCEEECCSC
T ss_pred             EeCCCCceeeeEEHHHHHHHHHHHHhcCC--CceEEEeCCC
Confidence             0     0246789999999999997543  4678876664

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.91  E-value=3.8e-24  Score=179.53  Aligned_cols=222  Identities=12%  Similarity=0.024  Sum_probs=162.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHH-HcCCEEEEeeCCCchh---------------HHHHHHhCCCceEEecCCCCHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIV-REGGRVVLCDLPTSEG---------------ESVAKELGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~-~~g~~v~~~~r~~~~~---------------~~~~~~~~~~~~~~~~Dls~~~~~~   66 (254)
                      .+|++||||||+|||+|.+..|+ +.|+.++++++..+..               .+..++.+.+..+++||++|+++++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            47999999999999999999998 7899999988865432               2334455889999999999999999


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCCcccc---------------------ccC-------CCCcCCHH---HHHHHHHHH
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCAFKIF---------------------NYN-------KGTVHSLD---DFKRILLVN  115 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~~~~~---------------------~~~-------~~~~~~~~---~~~~~~~~n  115 (254)
                      ++++++.+++|++|+||||++......+.                     +..       .+.-.+.+   .....|...
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s  208 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGE  208 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhh
Confidence            99999999999999999999976432110                     000       00012334   444555556


Q ss_pred             hHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC--ccchhchHHHHHhHHHHHHHhccCCcEEEEEecC
Q psy12833        116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ--VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG  193 (254)
Q Consensus       116 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg  193 (254)
                      .++.+...+...+.|.+        .++++.+|+..+....|.+  ..++++|++|+..++.|+.++++  ++++.++||
T Consensus       209 ~~s~w~~al~~a~lla~--------G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~  278 (401)
T 4ggo_A          209 DWERWIKQLSKEGLLEE--------GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNK  278 (401)
T ss_dssp             HHHHHHHHHHHTTCEEE--------EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECC
T ss_pred             HHHHHHHHHHhhhcccC--------CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcC
Confidence            67777777777777754        5899999999887765533  47899999999999999999974  899999999


Q ss_pred             Cccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        194 LFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       194 ~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                      .+.|.....++  +-....+-+-  + +..+.-|.+++.+..|...
T Consensus       279 a~vT~AssaIP~~ply~~~l~kv--m-k~~g~heg~ieq~~rl~~~  321 (401)
T 4ggo_A          279 GLVTRASAVIPVIPLYLASLFKV--M-KEKGNHEGCIEQITRLYAE  321 (401)
T ss_dssp             CCCCTTGGGSSSHHHHHHHHHHH--H-HHHTCCCCHHHHHHHHHHH
T ss_pred             ccccchhhcCCCchHHHHHHHHH--H-HhcCCCCchHHHHHHHHHH
Confidence            99998776543  1111110000  1 3334566777778888753

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.91  E-value=8.6e-24  Score=179.82  Aligned_cols=217  Identities=14%  Similarity=0.114  Sum_probs=158.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++++++|||||+|+||++++++|+++| ++|++++|+.....  .+.+ .++. +.+|++|+++++++++.  ..++++|
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~-~~~~-~~~d~~~~~~~~~~~~~--~~~~~~d  117 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL-VDLN-IADYMDKEDFLIQIMAG--EEFGDVE  117 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT-TTSC-CSEEEEHHHHHHHHHTT--CCCSSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc-cCce-EeeecCcHHHHHHHHhh--cccCCCC
Confidence            356899999999999999999999999 89999999765421  1111 1233 77899999988887763  1245799


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC---
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS---  157 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~---  157 (254)
                      +||||||....            ..++++..+++|+.++.++++++.+.    .      . ++|++||...+.+.+   
T Consensus       118 ~Vih~A~~~~~------------~~~~~~~~~~~n~~~~~~ll~a~~~~----~------~-r~V~~SS~~v~g~~~~~~  174 (357)
T 2x6t_A          118 AIFHEGACSST------------TEWDGKYMMDNNYQYSKELLHYCLER----E------I-PFLYASSAATYGGRTSDF  174 (357)
T ss_dssp             EEEECCSCCCT------------TCCCHHHHHHHTHHHHHHHHHHHHHH----T------C-CEEEEEEGGGGCSCSSCC
T ss_pred             EEEECCcccCC------------ccCCHHHHHHHHHHHHHHHHHHHHHc----C------C-eEEEEcchHHhCCCCCCC
Confidence            99999996532            12346788999999999999988762    2      3 899999987764432   


Q ss_pred             --------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------cchHHHHHHHHhcCC-----C-
Q psy12833        158 --------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------MLNEKVRNFLARSIP-----A-  217 (254)
Q Consensus       158 --------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~~~~~~~~~~-----~-  217 (254)
                              +...|+.+|.+.+.+++.++.+   .|++++.++|+.+.++...      .....+........+     . 
T Consensus       175 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (357)
T 2x6t_A          175 IESREYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGS  251 (357)
T ss_dssp             CSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTG
T ss_pred             cCCcCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCC
Confidence                    2568999999999999998765   4899999999999877532      122233333222211     0 


Q ss_pred             ---CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 ---PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 ---~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                         ...+++++|+|++++.+++.+.  |+.+++.+|..
T Consensus       252 ~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~i~~~~~  287 (357)
T 2x6t_A          252 ENFKRDFVYVGDVADVNLWFLENGV--SGIFNLGTGRA  287 (357)
T ss_dssp             GGCEECEEEHHHHHHHHHHHHHHCC--CEEEEESCSCC
T ss_pred             CcceEccEEHHHHHHHHHHHHhcCC--CCeEEecCCCc
Confidence               1245789999999999997554  88999988753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.91  E-value=7e-23  Score=172.21  Aligned_cols=217  Identities=15%  Similarity=0.098  Sum_probs=160.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      +++|||||+|+||++++++|+++|++|++++|+.....   +.+..++.++.+|++|++++++++++     .++|+|||
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih   73 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMH   73 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSCTTSEEEECCTTCHHHHHHHHHH-----SCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcCCCcEEEECCCCCHHHHHHHHhh-----cCCCEEEE
Confidence            48999999999999999999999999999998765432   22334788999999999999888875     37999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC---------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG---------  155 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~---------  155 (254)
                      +|+.....          .+.++++..+++|+.++.++++++..    ..      .+++|++||...+..         
T Consensus        74 ~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~------~~~~v~~Ss~~~~~~~~~~~~~E~  133 (330)
T 2c20_A           74 FAADSLVG----------VSMEKPLQYYNNNVYGALCLLEVMDE----FK------VDKFIFSSTAATYGEVDVDLITEE  133 (330)
T ss_dssp             CCCCCCHH----------HHHHSHHHHHHHHHHHHHHHHHHHHH----TT------CCEEEEECCGGGGCSCSSSSBCTT
T ss_pred             CCcccCcc----------ccccCHHHHHHHHhHHHHHHHHHHHH----cC------CCEEEEeCCceeeCCCCCCCCCcC
Confidence            99964321          13456788899999999999887643    22      468999999876542         


Q ss_pred             --CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc-----------ccchHHHHHHHHhcCC------
Q psy12833        156 --QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL-----------SMLNEKVRNFLARSIP------  216 (254)
Q Consensus       156 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~-----------~~~~~~~~~~~~~~~~------  216 (254)
                        ..+...|+.+|.+.+.+++.++.++   |++++.++|+.+.++..           ....+..........+      
T Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (330)
T 2c20_A          134 TMTNPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFG  210 (330)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEEC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeC
Confidence              1245789999999999999988765   89999999998876631           1112222222221111      


Q ss_pred             ------C---CCCCCCHHHHHHHHHHHhcCC--CcccceEEecCCcc
Q psy12833        217 ------A---PQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGALR  252 (254)
Q Consensus       217 ------~---~~~~~~~~~va~~~~~l~~~~--~~~G~~i~~~gG~~  252 (254)
                            .   ...+++++|+|++++.++..+  ...++++++.+|..
T Consensus       211 ~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~  257 (330)
T 2c20_A          211 DDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNG  257 (330)
T ss_dssp             SCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTC
T ss_pred             CccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCC
Confidence                  1   013568999999999998642  22478999877653

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.91  E-value=1.1e-22  Score=173.77  Aligned_cols=220  Identities=14%  Similarity=0.131  Sum_probs=152.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh-----HHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-----ESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~-----~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++|||||+|+||++++++|+++|++|++++|+.+..     +.+.++.   +.++.++.+|++|++++.++++..    
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence            6899999999999999999999999999999976532     1211111   356889999999999999998876    


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                       ++|+||||||.....          .+.++++..+++|+.++.++++++.+...++       .++||++||...+.+.
T Consensus        78 -~~d~vih~A~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~~iv~~SS~~v~g~~  139 (372)
T 1db3_A           78 -QPDEVYNLGAMSHVA----------VSFESPEYTADVDAMGTLRLLEAIRFLGLEK-------KTRFYQASTSELYGLV  139 (372)
T ss_dssp             -CCSEEEECCCCCTTT----------TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT-------TCEEEEEEEGGGGTTC
T ss_pred             -CCCEEEECCcccCcc----------ccccCHHHHHHHHHHHHHHHHHHHHHhCCCC-------CcEEEEeCChhhhCCC
Confidence             799999999964321          2345577889999999999999887754321       3799999998765431


Q ss_pred             -----------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-c----hHHHHHHHHhcC-C---
Q psy12833        157 -----------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-L----NEKVRNFLARSI-P---  216 (254)
Q Consensus       157 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~----~~~~~~~~~~~~-~---  216 (254)
                                 .+...|+.+|++.+.+++.++.++   ++.+..+.|..+..+.... .    ............ +   
T Consensus       140 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (372)
T 1db3_A          140 QEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLY  216 (372)
T ss_dssp             CSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEE
T ss_pred             CCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCcee
Confidence                       346789999999999999998875   4556556655443332111 0    111122222111 1   


Q ss_pred             -----CCCCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        217 -----APQRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       217 -----~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                           ....+++++|+|++++.++..+.  ++.+++.+|.
T Consensus       217 ~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~~~  254 (372)
T 1db3_A          217 LGNMDSLRDWGHAKDYVKMQWMMLQQEQ--PEDFVIATGV  254 (372)
T ss_dssp             ESCTTCEECCEEHHHHHHHHHHTTSSSS--CCCEEECCCC
T ss_pred             ecCCCceeeeeEHHHHHHHHHHHHhcCC--CceEEEcCCC
Confidence                 00246799999999999987543  4778887664

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.91  E-value=7.4e-23  Score=172.92  Aligned_cols=214  Identities=20%  Similarity=0.196  Sum_probs=157.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-HHHHHHHHHHHHHcCCCcEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-EDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~id~l   82 (254)
                      +++|||||+|+||++++++|+++ |++|++++|+.+..+...+  ..++.++.+|++|. +.++++++       ++|+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-------~~d~v   71 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK-------KCDVV   71 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHH-------HCSEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc--CCCeEEEeccccCcHHHHHhhcc-------CCCEE
Confidence            37999999999999999999998 8999999998776543321  34688999999984 56766665       57999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC-----
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-----  157 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~-----  157 (254)
                      |||||......          ..++++..+++|+.++.++++++..    .       .+++|++||...+...+     
T Consensus        72 ih~A~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~----~-------~~~~v~~SS~~v~g~~~~~~~~  130 (345)
T 2bll_A           72 LPLVAIATPIE----------YTRNPLRVFELDFEENLRIIRYCVK----Y-------RKRIIFPSTSEVYGMCSDKYFD  130 (345)
T ss_dssp             EECBCCCCHHH----------HHHSHHHHHHHHTHHHHHHHHHHHH----T-------TCEEEEECCGGGGBTCCCSSBC
T ss_pred             EEcccccCccc----------hhcCHHHHHHHHHHHHHHHHHHHHH----h-------CCeEEEEecHHHcCCCCCCCcC
Confidence            99999643211          1245677899999999998887754    1       25899999977653221     


Q ss_pred             -------------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----------chHHHHHHHHhc
Q psy12833        158 -------------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----------LNEKVRNFLARS  214 (254)
Q Consensus       158 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----------~~~~~~~~~~~~  214 (254)
                                   +...|+.+|.+.+.+++.++.++   |++++.++|+.+.++....          ....+.......
T Consensus       131 e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (345)
T 2bll_A          131 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEG  207 (345)
T ss_dssp             TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHT
T ss_pred             CcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcC
Confidence                         12379999999999999988765   7999999999998775421          112222222222


Q ss_pred             CCC--------CCCCCCHHHHHHHHHHHhcCCC--cccceEEecCCc
Q psy12833        215 IPA--------PQRLGHPDEFAQLVQSIITNPL--INGEVIRIDGAL  251 (254)
Q Consensus       215 ~~~--------~~~~~~~~~va~~~~~l~~~~~--~~G~~i~~~gG~  251 (254)
                      .+.        ...+++++|+|++++.++..+.  .+|+++++.+|.
T Consensus       208 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          208 SPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             CCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            110        0246799999999999997543  689999998874

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.91  E-value=1.3e-23  Score=176.11  Aligned_cols=212  Identities=16%  Similarity=0.124  Sum_probs=146.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-CCch---hHHHHHHhC---CCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSE---GESVAKELG---PDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-~~~~---~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+.   ...+ .++.   .++.++.+|++|+++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999888 5432   2222 1111   246788999999998888876      


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                       ++|+|||||+..   .         ...++ +++.+++|+.++.++++++.+..   .      .++||++||..+..+
T Consensus        74 -~~d~vih~A~~~---~---------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~------~~~iV~~SS~~~~~~  131 (322)
T 2p4h_X           74 -GCVGIFHTASPI---D---------FAVSEPEEIVTKRTVDGALGILKACVNSK---T------VKRFIYTSSGSAVSF  131 (322)
T ss_dssp             -TCSEEEECCCCC--------------------CHHHHHHHHHHHHHHHHHTTCS---S------CCEEEEEEEGGGTSC
T ss_pred             -CCCEEEEcCCcc---c---------CCCCChHHHHHHHHHHHHHHHHHHHHhcC---C------ccEEEEeccHHHccc
Confidence             679999999632   1         11122 34689999999999999876531   1      469999999875432


Q ss_pred             CC----------------------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-chHHHH---H
Q psy12833        156 QS----------------------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-LNEKVR---N  209 (254)
Q Consensus       156 ~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~~~~~~---~  209 (254)
                      .+                      ....|+.+|.+.+.+++.++.+   .|++++.++|+.+.++.... ......   .
T Consensus       132 ~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~  208 (322)
T 2p4h_X          132 NGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALV  208 (322)
T ss_dssp             SSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTH
T ss_pred             CCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHH
Confidence            11                      1115999999877776665542   58999999999999886532 111111   1


Q ss_pred             HHHhc---CCCCC--CCCCHHHHHHHHHHHhcCCCcccceEEecC
Q psy12833        210 FLARS---IPAPQ--RLGHPDEFAQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       210 ~~~~~---~~~~~--~~~~~~~va~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      ...+.   .+. .  .+++++|+|++++++++.+..+|+ +++.+
T Consensus       209 ~~~g~~~~~~~-~~~~~i~v~Dva~a~~~~~~~~~~~g~-~~~~~  251 (322)
T 2p4h_X          209 LVLGKKEQIGV-TRFHMVHVDDVARAHIYLLENSVPGGR-YNCSP  251 (322)
T ss_dssp             HHHSCGGGCCE-EEEEEEEHHHHHHHHHHHHHSCCCCEE-EECCC
T ss_pred             HHhCCCccCcC-CCcCEEEHHHHHHHHHHHhhCcCCCCC-EEEcC
Confidence            11111   111 1  378999999999999976557787 44543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.90  E-value=2e-22  Score=169.73  Aligned_cols=220  Identities=14%  Similarity=0.108  Sum_probs=158.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH-HHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE-SVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~-~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++++|||||+|+||++++++|+++|++|++++|+.+... ...+.+  ..++.++.+|++|++++.++++..     ++|
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   88 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQ   88 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CCC
Confidence            579999999999999999999999999999999866421 111222  246889999999999999998876     799


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ----  156 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~----  156 (254)
                      +||||||.....          ...+++...+++|+.++.++++++.+.   ..      .+++|++||...+.+.    
T Consensus        89 ~Vih~A~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~------~~~~v~~SS~~v~g~~~~~~  149 (335)
T 1rpn_A           89 EVYNLAAQSFVG----------ASWNQPVTTGVVDGLGVTHLLEAIRQF---SP------ETRFYQASTSEMFGLIQAER  149 (335)
T ss_dssp             EEEECCSCCCHH----------HHTTSHHHHHHHHTHHHHHHHHHHHHH---CT------TSEEEEEEEGGGGCSCSSSS
T ss_pred             EEEECccccchh----------hhhhChHHHHHHHHHHHHHHHHHHHHh---CC------CCeEEEEeCHHHhCCCCCCC
Confidence            999999964211          123456788999999999999988653   10      2689999998765432    


Q ss_pred             -------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-c----hHHHHHHHHhcC-CC------
Q psy12833        157 -------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-L----NEKVRNFLARSI-PA------  217 (254)
Q Consensus       157 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-~----~~~~~~~~~~~~-~~------  217 (254)
                             .+...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..+.... .    ............ +.      
T Consensus       150 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g  226 (335)
T 1rpn_A          150 QDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNV  226 (335)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCT
T ss_pred             CCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCC
Confidence                   234689999999999999988765   6788888888776653221 1    111111121111 10      


Q ss_pred             --CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 --PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 --~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                        ...+++++|+|++++.++..+.  ++.+++.+|..
T Consensus       227 ~~~~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~~~~  261 (335)
T 1rpn_A          227 DAKRDWGFAGDYVEAMWLMLQQDK--ADDYVVATGVT  261 (335)
T ss_dssp             TCEEECEEHHHHHHHHHHHHHSSS--CCCEEECCSCE
T ss_pred             cceeceEEHHHHHHHHHHHHhcCC--CCEEEEeCCCC
Confidence              0236789999999999997653  47888877653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.90  E-value=6.2e-23  Score=169.74  Aligned_cols=195  Identities=16%  Similarity=0.168  Sum_probs=149.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      .+++|||||+|+||++++++|+++|++|++++|+                  ++|++|++++.++++..     ++|+||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~Dl~d~~~~~~~~~~~-----~~d~vi   68 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------DLDITNVLAVNKFFNEK-----KPNVVI   68 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------TCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------cCCCCCHHHHHHHHHhc-----CCCEEE
Confidence            5799999999999999999999999999999986                  38999999999988865     799999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC------
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS------  157 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~------  157 (254)
                      ||||.....          ...++++..+++|+.++.++++++.+.           ..++|++||...+.+.+      
T Consensus        69 h~A~~~~~~----------~~~~~~~~~~~~nv~~~~~l~~a~~~~-----------~~~iv~~SS~~v~~~~~~~~~~E  127 (292)
T 1vl0_A           69 NCAAHTAVD----------KCEEQYDLAYKINAIGPKNLAAAAYSV-----------GAEIVQISTDYVFDGEAKEPITE  127 (292)
T ss_dssp             ECCCCCCHH----------HHHHCHHHHHHHHTHHHHHHHHHHHHH-----------TCEEEEEEEGGGSCSCCSSCBCT
T ss_pred             ECCccCCHH----------HHhcCHHHHHHHHHHHHHHHHHHHHHc-----------CCeEEEechHHeECCCCCCCCCC
Confidence            999964211          234667889999999999999988762           23899999987654432      


Q ss_pred             -----CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCC------CCCCCCCHHH
Q psy12833        158 -----GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP------APQRLGHPDE  226 (254)
Q Consensus       158 -----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  226 (254)
                           +...|+.+|.+.+.+++.++.       .+..++|+.+.++ ................+      ....+++++|
T Consensus       128 ~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  199 (292)
T 1vl0_A          128 FDEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVHDQVGTPTSTVD  199 (292)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEESSCEECCEEHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeecCeeeCCccHHH
Confidence                 456899999999999987643       3677888887765 22222222222222111      1145678999


Q ss_pred             HHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        227 FAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       227 va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      +|++++.+++.+  .|+.+++.+|..
T Consensus       200 va~~~~~~~~~~--~~~~~~i~~~~~  223 (292)
T 1vl0_A          200 LARVVLKVIDEK--NYGTFHCTCKGI  223 (292)
T ss_dssp             HHHHHHHHHHHT--CCEEEECCCBSC
T ss_pred             HHHHHHHHHhcC--CCcEEEecCCCC
Confidence            999999999765  789999988753

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.90  E-value=1.1e-22  Score=161.24  Aligned_cols=201  Identities=12%  Similarity=0.068  Sum_probs=135.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.    .++.++.+|++|+++         +.+.++|++|||
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~D~~d~~~---------~~~~~~d~vi~~   68 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----KDINILQKDIFDLTL---------SDLSDQNVVVDA   68 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----SSSEEEECCGGGCCH---------HHHTTCSEEEEC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----CCCeEEeccccChhh---------hhhcCCCEEEEC
Confidence            6999999999999999999999999999999987765442    678999999999887         223479999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC--------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS--------  157 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~--------  157 (254)
                      +|....                   ...+|+.+    ++.+++.+.+..      .+++|++||..+..+.+        
T Consensus        69 ag~~~~-------------------~~~~~~~~----~~~l~~a~~~~~------~~~~v~~SS~~~~~~~~~~~~~~~~  119 (221)
T 3ew7_A           69 YGISPD-------------------EAEKHVTS----LDHLISVLNGTV------SPRLLVVGGAASLQIDEDGNTLLES  119 (221)
T ss_dssp             CCSSTT-------------------TTTSHHHH----HHHHHHHHCSCC------SSEEEEECCCC--------------
T ss_pred             CcCCcc-------------------ccchHHHH----HHHHHHHHHhcC------CceEEEEecceEEEcCCCCcccccc
Confidence            997321                   02224444    455556665554      57999999987754332        


Q ss_pred             ----CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        158 ----GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       158 ----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                          +...|+.+|.+.+.+. .+..  ...|++++.++||.+.++......-................++++|+|++++.
T Consensus       120 ~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  196 (221)
T 3ew7_A          120 KGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLD  196 (221)
T ss_dssp             -----CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHH
Confidence                2456999999888762 2221  15789999999999988621110000000000000111347899999999999


Q ss_pred             HhcCCCcccceEEecCCc
Q psy12833        234 IITNPLINGEVIRIDGAL  251 (254)
Q Consensus       234 l~~~~~~~G~~i~~~gG~  251 (254)
                      ++..+...|+.+++-|-.
T Consensus       197 ~l~~~~~~g~~~~~~~~~  214 (221)
T 3ew7_A          197 EIERPNHLNEHFTVAGKL  214 (221)
T ss_dssp             HHHSCSCTTSEEECCC--
T ss_pred             HHhCccccCCEEEECCCC
Confidence            998887889999987643

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.90  E-value=1.5e-22  Score=169.00  Aligned_cols=206  Identities=17%  Similarity=0.127  Sum_probs=156.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      +++|||||+|+||++++++|.++|++|++++|+....+ +     .++.++.+|++ ++++.++++       ++|+|||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-----~~~~~~~~Dl~-~~~~~~~~~-------~~d~Vih   68 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-----NDYEYRVSDYT-LEDLINQLN-------DVDAVVH   68 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------CCEEEECCCC-HHHHHHHTT-------TCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-----CceEEEEcccc-HHHHHHhhc-------CCCEEEE
Confidence            78999999999999999999999999999999844332 2     27899999999 988888776       7999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC---------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG---------  155 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~---------  155 (254)
                      +|+.....              +....+++|+.++.++++++..    ..      .+++|++||...+.+         
T Consensus        69 ~a~~~~~~--------------~~~~~~~~n~~~~~~ll~a~~~----~~------~~r~v~~SS~~vyg~~~~~~~~E~  124 (311)
T 3m2p_A           69 LAATRGSQ--------------GKISEFHDNEILTQNLYDACYE----NN------ISNIVYASTISAYSDETSLPWNEK  124 (311)
T ss_dssp             CCCCCCSS--------------SCGGGTHHHHHHHHHHHHHHHH----TT------CCEEEEEEEGGGCCCGGGCSBCTT
T ss_pred             ccccCCCC--------------ChHHHHHHHHHHHHHHHHHHHH----cC------CCEEEEEccHHHhCCCCCCCCCCC
Confidence            99975422              2344678899999888887754    22      468999999766532         


Q ss_pred             --CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc--cchHHHHHHHHhcCCC--------CCCCCC
Q psy12833        156 --QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPA--------PQRLGH  223 (254)
Q Consensus       156 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~~~~--------~~~~~~  223 (254)
                        ..+...|+.+|.+.+.+++.++.+   .|++++.++|+.+.++...  .....+........+.        ...+++
T Consensus       125 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~  201 (311)
T 3m2p_A          125 ELPLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLY  201 (311)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEE
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEE
Confidence              124568999999999999988874   5899999999999887654  2333443433332211        024678


Q ss_pred             HHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        224 PDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       224 ~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      ++|+|++++.+++.+. .|+++++.+|..
T Consensus       202 v~Dva~a~~~~~~~~~-~~~~~~i~~~~~  229 (311)
T 3m2p_A          202 AKDAAKSVIYALKQEK-VSGTFNIGSGDA  229 (311)
T ss_dssp             HHHHHHHHHHHTTCTT-CCEEEEECCSCE
T ss_pred             HHHHHHHHHHHHhcCC-CCCeEEeCCCCc
Confidence            9999999999998765 899999988764

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.90  E-value=1.5e-23  Score=212.55  Aligned_cols=174  Identities=18%  Similarity=0.221  Sum_probs=136.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhH---HHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGE---SVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~---~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      .+|++|||||++|||++++++|+++|++ |++++|+..+.+   +..+++   +.++.++.||++|+++++++++++.+ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence            5799999999999999999999999997 888999866542   333332   66788999999999999999999974 


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++|||||+.....+.+      ++.++|++.+++|+.+++++.+.+.+.|.+        .++||++||.++..+
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~------~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--------~g~iV~iSS~ag~~g 2027 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLEN------QTPEFFQDVSKPKYSGTANLDRVTREACPE--------LDYFVIFSSVSCGRG 2027 (2512)
T ss_dssp             HSCEEEEEECCCC----------------------CTTTTHHHHHHHHHHHHHHCTT--------CCEEEEECCHHHHTT
T ss_pred             cCCCcEEEECCCcCCCCchhh------CCHHHHHHHHHHHHHHHHHHHHHHHHhccc--------CCEEEEecchhhcCC
Confidence            789999999999876555555      899999999999999999999999998754        379999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCc
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF  195 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~  195 (254)
                      .+++..|+++|+++++|++..+.+    |+...++..|..
T Consensus      2028 ~~g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2028 NAGQANYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            999999999999999999976654    666666666554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.90  E-value=8e-24  Score=178.60  Aligned_cols=215  Identities=18%  Similarity=0.159  Sum_probs=146.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH--HHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA--KEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~--~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..++..  .++  ..++.++++|++|++++.++++       ++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            578999999999999999999999999999888765432111  112  2468889999999988887775       68


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc----
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDD-FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE----  154 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~----  154 (254)
                      |+|||+|+...            ...++ .++.+++|+.++.++++++.+..   .      .++||++||.++..    
T Consensus        82 D~Vih~A~~~~------------~~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~------v~r~V~~SS~~~~~~~~~  140 (338)
T 2rh8_A           82 DFVFHVATPVH------------FASEDPENDMIKPAIQGVVNVMKACTRAK---S------VKRVILTSSAAAVTINQL  140 (338)
T ss_dssp             SEEEEESSCCC------------C---------CHHHHHHHHHHHHHHHHCT---T------CCEEEEECCHHHHHHHHH
T ss_pred             CEEEEeCCccC------------CCCCCcHHHHHHHHHHHHHHHHHHHHHcC---C------cCEEEEEecHHHeecCCc
Confidence            99999998531            11122 24578999999999999887532   1      36899999976321    


Q ss_pred             -----CC------------C---CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHH---
Q psy12833        155 -----GQ------------S---GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNF---  210 (254)
Q Consensus       155 -----~~------------~---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~---  210 (254)
                           +.            +   ....|+.+|.+.+.+++.++.+   .|++++.++|+.+.++..... .......   
T Consensus       141 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~  217 (338)
T 2rh8_A          141 DGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSL  217 (338)
T ss_dssp             TCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHH
T ss_pred             CCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHH
Confidence                 00            0   1125999999999888877654   489999999999988864321 1111000   


Q ss_pred             HHh---------cC--CC-CCCCCCHHHHHHHHHHHhcCCCcccceEEecC
Q psy12833        211 LAR---------SI--PA-PQRLGHPDEFAQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       211 ~~~---------~~--~~-~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      ..+         ..  +. ...+++++|+|++++++++.+...|+++..++
T Consensus       218 ~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~  268 (338)
T 2rh8_A          218 ITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAA  268 (338)
T ss_dssp             HHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTCCEEEEECSE
T ss_pred             HcCCccccccccccccccCcccEEEHHHHHHHHHHHHcCCCcCCcEEEecC
Confidence            000         00  00 01478999999999999976655666443333

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.89  E-value=7e-22  Score=166.68  Aligned_cols=219  Identities=14%  Similarity=0.098  Sum_probs=151.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch----hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE----GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++|||||+|+||++++++|+++|++|++++|....    .+.+.+..+.++.++.+|++|++++.++++..     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            69999999999999999999999999998874322    22222222557889999999999998888752     6999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG------  155 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~------  155 (254)
                      ||||||.....          ...++....+++|+.++.++++++..    ..      .++||++||...+..      
T Consensus        77 vih~A~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~~~iv~~SS~~~~g~~~~~~~  136 (338)
T 1udb_A           77 VIHFAGLKAVG----------ESVQKPLEYYDNNVNGTLRLISAMRA----AN------VKNFIFSSSATVYGDNPKIPY  136 (338)
T ss_dssp             EEECCSCCCHH----------HHHHCHHHHHHHHHHHHHHHHHHHHH----HT------CCEEEEEEEGGGGCSCCSSSB
T ss_pred             EEECCccCccc----------cchhcHHHHHHHHHHHHHHHHHHHHh----cC------CCeEEEEccHHHhCCCCCCCc
Confidence            99999964321          12244567899999999999886533    22      468999999876531      


Q ss_pred             -----C-CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccc------------cccchHHHHHHHHhcCC-
Q psy12833        156 -----Q-SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL------------LSMLNEKVRNFLARSIP-  216 (254)
Q Consensus       156 -----~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~------------~~~~~~~~~~~~~~~~~-  216 (254)
                           . ++...|+.+|++.+.+++.++.++  .++++..++|+.+..+.            ................+ 
T Consensus       137 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  214 (338)
T 1udb_A          137 VESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDS  214 (338)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSC
T ss_pred             CcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCC
Confidence                 1 236789999999999999998874  37888888875543321            11112222222221110 


Q ss_pred             -----------C---CCCCCCHHHHHHHHHHHhcCC--CcccceEEecCCc
Q psy12833        217 -----------A---PQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGAL  251 (254)
Q Consensus       217 -----------~---~~~~~~~~~va~~~~~l~~~~--~~~G~~i~~~gG~  251 (254)
                                 .   ...+++++|+|++++.++...  ...++++++.+|.
T Consensus       215 ~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~  265 (338)
T 1udb_A          215 LAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV  265 (338)
T ss_dssp             EEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSC
T ss_pred             cEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCC
Confidence                       0   013578999999999888531  2234788887664

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.89  E-value=4.9e-22  Score=168.10  Aligned_cols=213  Identities=14%  Similarity=0.158  Sum_probs=152.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++++++|||||+|+||++++++|+++|++|++++|+.....+...++  ..++.++.+|+.|..            +.++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~   92 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------YIEV   92 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------CCCC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------hcCC
Confidence            56789999999999999999999999999999999754322211222  346889999998752            3579


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-----
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-----  154 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-----  154 (254)
                      |+|||||+......          ..++++..+++|+.++.++++++...           ..++|++||...+.     
T Consensus        93 d~vih~A~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~a~~~~-----------~~~~v~~SS~~v~g~~~~~  151 (343)
T 2b69_A           93 DQIYHLASPASPPN----------YMYNPIKTLKTNTIGTLNMLGLAKRV-----------GARLLLASTSEVYGDPEVH  151 (343)
T ss_dssp             SEEEECCSCCSHHH----------HTTCHHHHHHHHHHHHHHHHHHHHHH-----------TCEEEEEEEGGGGBSCSSS
T ss_pred             CEEEECccccCchh----------hhhCHHHHHHHHHHHHHHHHHHHHHh-----------CCcEEEECcHHHhCCCCCC
Confidence            99999999643211          11234677899999999999887652           23899999987652     


Q ss_pred             -----------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----chHHHHHHHHhcCC---
Q psy12833        155 -----------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----LNEKVRNFLARSIP---  216 (254)
Q Consensus       155 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----~~~~~~~~~~~~~~---  216 (254)
                                 +..+...|+.+|.+.+.+++.++.++   +++++.++|+.+.++....    ....+........+   
T Consensus       152 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (343)
T 2b69_A          152 PQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV  228 (343)
T ss_dssp             SBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEE
T ss_pred             CCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceE
Confidence                       22345679999999999999988764   7999999999998875321    11222222222111   


Q ss_pred             --C---CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        217 --A---PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       217 --~---~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                        .   ...+++++|+|++++.++..+.  |+.+++.+|..
T Consensus       229 ~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~i~~~~~  267 (343)
T 2b69_A          229 YGSGSQTRAFQYVSDLVNGLVALMNSNV--SSPVNLGNPEE  267 (343)
T ss_dssp             ESSSCCEEECEEHHHHHHHHHHHHTSSC--CSCEEESCCCE
T ss_pred             cCCCCeEEeeEeHHHHHHHHHHHHhcCC--CCeEEecCCCC
Confidence              0   0246699999999999997542  67888887753

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.89  E-value=9.1e-23  Score=162.31  Aligned_cols=196  Identities=12%  Similarity=0.038  Sum_probs=140.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||||+||++++++|+++|++|++++|+.++.+++   ...++.++.+|++|+++         +.+.++|+||||
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~D~~d~~~---------~~~~~~d~vi~~   69 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---LGATVATLVKEPLVLTE---------ADLDSVDAVVDA   69 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---TCTTSEEEECCGGGCCH---------HHHTTCSEEEEC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc---cCCCceEEecccccccH---------hhcccCCEEEEC
Confidence            599999999999999999999999999999987765543   24679999999999887         223479999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC-------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG-------  158 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~-------  158 (254)
                      ||....    .      ..       ..+|+.+...+    ++.+.+.       .+++|++||..+..+.+.       
T Consensus        70 ag~~~~----~------~~-------~~~n~~~~~~l----~~a~~~~-------~~~~v~~SS~~~~~~~~~~~~~~~~  121 (224)
T 3h2s_A           70 LSVPWG----S------GR-------GYLHLDFATHL----VSLLRNS-------DTLAVFILGSASLAMPGADHPMILD  121 (224)
T ss_dssp             CCCCTT----S------SC-------THHHHHHHHHH----HHTCTTC-------CCEEEEECCGGGSBCTTCSSCGGGG
T ss_pred             CccCCC----c------ch-------hhHHHHHHHHH----HHHHHHc-------CCcEEEEecceeeccCCCCcccccc
Confidence            997510    0      01       24566665444    4444433       379999999876654333       


Q ss_pred             -------CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCC---CCCCCCCHHHHH
Q psy12833        159 -------QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP---APQRLGHPDEFA  228 (254)
Q Consensus       159 -------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~va  228 (254)
                             ...|+.+|.+.+.+    .......+++++.++||.+.++.....   . ......++   .....++++|+|
T Consensus       122 ~~~~~~~~~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~~~~~~---~-~~~~~~~~~~~~~~~~i~~~DvA  193 (224)
T 3h2s_A          122 FPESAASQPWYDGALYQYYEY----QFLQMNANVNWIGISPSEAFPSGPATS---Y-VAGKDTLLVGEDGQSHITTGNMA  193 (224)
T ss_dssp             CCGGGGGSTTHHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCCCCCCC---E-EEESSBCCCCTTSCCBCCHHHHH
T ss_pred             CCCCCccchhhHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCCCcccC---c-eecccccccCCCCCceEeHHHHH
Confidence                   56899999988844    222346799999999999987632110   0 00000111   114578999999


Q ss_pred             HHHHHHhcCCCcccceEEecC
Q psy12833        229 QLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       229 ~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      ++++.++..+...|++|++.|
T Consensus       194 ~~~~~~l~~~~~~g~~~~~~~  214 (224)
T 3h2s_A          194 LAILDQLEHPTAIRDRIVVRD  214 (224)
T ss_dssp             HHHHHHHHSCCCTTSEEEEEE
T ss_pred             HHHHHHhcCccccCCEEEEec
Confidence            999999998878899998854

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.89  E-value=4e-22  Score=182.43  Aligned_cols=218  Identities=18%  Similarity=0.196  Sum_probs=161.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHH-HHHHHHHHHHHcCC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEED-VQKAVLLCKDSFGK   78 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~-~~~~~~~~~~~~~~   78 (254)
                      |++++++|||||+|+||++++++|+++ |++|++++|+.+..++...  ..++.++.+|++|.++ ++++++       +
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~--~~~v~~v~~Dl~d~~~~~~~~~~-------~  382 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK-------K  382 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT--CTTEEEEECCTTTCHHHHHHHHH-------H
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc--CCceEEEECCCCCcHHHHHHhhc-------C
Confidence            356789999999999999999999998 8999999998766543221  3568899999999765 555554       5


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--  156 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--  156 (254)
                      +|+||||||.....          ...++++..+++|+.++.++++++...           .+++|++||...+.+.  
T Consensus       383 ~D~Vih~Aa~~~~~----------~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----------~~r~V~~SS~~vyg~~~~  441 (660)
T 1z7e_A          383 CDVVLPLVAIATPI----------EYTRNPLRVFELDFEENLRIIRYCVKY-----------RKRIIFPSTSEVYGMCSD  441 (660)
T ss_dssp             CSEEEECCCCCCTH----------HHHHSHHHHHHHHTHHHHHHHHHHHHT-----------TCEEEEECCGGGGBTCCS
T ss_pred             CCEEEECceecCcc----------ccccCHHHHHHhhhHHHHHHHHHHHHh-----------CCEEEEEecHHHcCCCCC
Confidence            89999999965321          123456778999999999988887642           2589999998765321  


Q ss_pred             ----------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----------chHHHHHH
Q psy12833        157 ----------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----------LNEKVRNF  210 (254)
Q Consensus       157 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----------~~~~~~~~  210 (254)
                                      .+...|+.+|.+.+.+++.++.++   |++++.++||.+.++....          ....+...
T Consensus       442 ~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~  518 (660)
T 1z7e_A          442 KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN  518 (660)
T ss_dssp             SSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHH
T ss_pred             cccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHH
Confidence                            122369999999999999988765   7999999999998875421          11222222


Q ss_pred             HHhcCCC--------CCCCCCHHHHHHHHHHHhcCC--CcccceEEecCCc
Q psy12833        211 LARSIPA--------PQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGAL  251 (254)
Q Consensus       211 ~~~~~~~--------~~~~~~~~~va~~~~~l~~~~--~~~G~~i~~~gG~  251 (254)
                      .....+.        ...+++++|+|++++.+++.+  ..+|+++++++|.
T Consensus       519 ~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          519 LVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             HHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             HHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            2222221        023678999999999999754  3689999999874

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.88  E-value=4.1e-22  Score=166.15  Aligned_cols=212  Identities=15%  Similarity=0.090  Sum_probs=157.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHc--CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVRE--GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++++|||||+|+||++++++|+++  |++|++++|+....+ ..    .++.++.+|++|++++.+++++.     ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~-----~~d~   71 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV----NSGPFEVVNALDFNQIEHLVEVH-----KITD   71 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH----HSSCEEECCTTCHHHHHHHHHHT-----TCCE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc----CCCceEEecCCCHHHHHHHHhhc-----CCCE
Confidence            478999999999999999999999  899999999876532 21    25788999999999999888754     7999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-----
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-----  156 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-----  156 (254)
                      +||||+.....           ..++++..+++|+.++.++++++.+    ..      .+++|++||...+.+.     
T Consensus        72 vih~a~~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~~~~v~~SS~~~~~~~~~~~~  130 (312)
T 2yy7_A           72 IYLMAALLSAT-----------AEKNPAFAWDLNMNSLFHVLNLAKA----KK------IKKIFWPSSIAVFGPTTPKEN  130 (312)
T ss_dssp             EEECCCCCHHH-----------HHHCHHHHHHHHHHHHHHHHHHHHT----TS------CSEEECCEEGGGCCTTSCSSS
T ss_pred             EEECCccCCCc-----------hhhChHHHHHHHHHHHHHHHHHHHH----cC------CCEEEEeccHHHhCCCCCCCC
Confidence            99999864211           1245678899999999999888754    22      4689999998766432     


Q ss_pred             -------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc-------chHHHHHHHHhc-CC---C-
Q psy12833        157 -------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM-------LNEKVRNFLARS-IP---A-  217 (254)
Q Consensus       157 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~-------~~~~~~~~~~~~-~~---~-  217 (254)
                             .+...|+.+|.+.+.+++.++.++   |++++.++|+.+..+....       ....+....... .+   . 
T Consensus       131 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (312)
T 2yy7_A          131 TPQYTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSS  207 (312)
T ss_dssp             BCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCT
T ss_pred             ccccCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCC
Confidence                   235689999999999999988765   7999999999887743211       112222222221 11   0 


Q ss_pred             --CCCCCCHHHHHHHHHHHhcCCCc---ccceEEecC
Q psy12833        218 --PQRLGHPDEFAQLVQSIITNPLI---NGEVIRIDG  249 (254)
Q Consensus       218 --~~~~~~~~~va~~~~~l~~~~~~---~G~~i~~~g  249 (254)
                        ...+++++|+|++++.++..+..   .|+.+++.|
T Consensus       208 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          208 ETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             TCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             CceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC
Confidence              12356899999999999975432   358888864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.88  E-value=9.7e-22  Score=164.61  Aligned_cols=206  Identities=11%  Similarity=0.088  Sum_probs=153.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+++++|||||+|+||++++++|+++|++|+++.|+.                 .+|++|++++.+++++.     ++|+
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------~~D~~d~~~~~~~~~~~-----~~d~   58 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------ELNLLDSRAVHDFFASE-----RIDQ   58 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------cCCccCHHHHHHHHHhc-----CCCE
Confidence            3568999999999999999999999999999888752                 37999999999888765     7999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-----
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-----  156 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-----  156 (254)
                      |||+|+......         ...++....+++|+.++.++++++..    ..      .+++|++||...+.+.     
T Consensus        59 vih~a~~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~~~~v~~SS~~vyg~~~~~~~  119 (321)
T 1e6u_A           59 VYLAAAKVGGIV---------ANNTYPADFIYQNMMIESNIIHAAHQ----ND------VNKLLFLGSSCIYPKLAKQPM  119 (321)
T ss_dssp             EEECCCCCCCHH---------HHHHCHHHHHHHHHHHHHHHHHHHHH----TT------CCEEEEECCGGGSCTTCCSSB
T ss_pred             EEEcCeecCCcc---------hhhhCHHHHHHHHHHHHHHHHHHHHH----hC------CCeEEEEccHHHcCCCCCCCc
Confidence            999999643111         12345677899999999999888765    22      3689999998765321     


Q ss_pred             --------C--C-CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------cchHHHHHHHHh------
Q psy12833        157 --------S--G-QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------MLNEKVRNFLAR------  213 (254)
Q Consensus       157 --------~--~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~~~~~~~------  213 (254)
                              +  + ...|+.+|.+.+.+++.++.++   +++++.++|+.+..+...      .....+......      
T Consensus       120 ~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~  196 (321)
T 1e6u_A          120 AESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKA  196 (321)
T ss_dssp             CGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTC
T ss_pred             CccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCC
Confidence                    1  1 2489999999999999988765   799999999999876543      222223222211      


Q ss_pred             -cCC---C---CCCCCCHHHHHHHHHHHhcCCCc--------ccceEEecCCc
Q psy12833        214 -SIP---A---PQRLGHPDEFAQLVQSIITNPLI--------NGEVIRIDGAL  251 (254)
Q Consensus       214 -~~~---~---~~~~~~~~~va~~~~~l~~~~~~--------~G~~i~~~gG~  251 (254)
                       .++   .   ...+++++|+|++++.++..+..        .|+++++.+|.
T Consensus       197 ~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~  249 (321)
T 1e6u_A          197 PDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGV  249 (321)
T ss_dssp             SEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSC
T ss_pred             CceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCC
Confidence             111   1   02456999999999999976533        37899997764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.88  E-value=2e-21  Score=160.18  Aligned_cols=197  Identities=14%  Similarity=0.086  Sum_probs=147.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc--CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE--GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      |++|||||+|+||++++++|+++  |++|++++|+.+..+.+..   .++.++.+|++|++++.++++       ++|++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~d~~~l~~~~~-------~~d~v   70 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---QGVEVRHGDYNQPESLQKAFA-------GVSKL   70 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---TTCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---cCCeEEEeccCCHHHHHHHHh-------cCCEE
Confidence            46999999999999999999999  9999999998877665433   468899999999998888776       68999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccc
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY  162 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y  162 (254)
                      ||+|+..             .. +      ++|+.+..++++++..    ..      .++||++||..... .  ...|
T Consensus        71 i~~a~~~-------------~~-~------~~n~~~~~~l~~a~~~----~~------~~~~v~~Ss~~~~~-~--~~~y  117 (287)
T 2jl1_A           71 LFISGPH-------------YD-N------TLLIVQHANVVKAARD----AG------VKHIAYTGYAFAEE-S--IIPL  117 (287)
T ss_dssp             EECCCCC-------------SC-H------HHHHHHHHHHHHHHHH----TT------CSEEEEEEETTGGG-C--CSTH
T ss_pred             EEcCCCC-------------cC-c------hHHHHHHHHHHHHHHH----cC------CCEEEEECCCCCCC-C--CCch
Confidence            9999842             11 1      5688888888777643    22      46899999987753 2  2379


Q ss_pred             hhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccc-cccchHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHHhcCC
Q psy12833        163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIP---APQRLGHPDEFAQLVQSIITNP  238 (254)
Q Consensus       163 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~va~~~~~l~~~~  238 (254)
                      +.+|.+.+.+.+.       .|++++.++||++.++. ...+....... ....+   ....+++++|+|+++..++..+
T Consensus       118 ~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  189 (287)
T 2jl1_A          118 AHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESG-AIVTNAGSGIVNSVTRNELALAAATVLTEE  189 (287)
T ss_dssp             HHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHT-EEEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHHHhhCC-ceeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence            9999999988753       58999999999987765 22222111110 00011   1146789999999999999876


Q ss_pred             CcccceEEecCCcc
Q psy12833        239 LINGEVIRIDGALR  252 (254)
Q Consensus       239 ~~~G~~i~~~gG~~  252 (254)
                      ..+|+.+++.||..
T Consensus       190 ~~~g~~~~i~~~~~  203 (287)
T 2jl1_A          190 GHENKTYNLVSNQP  203 (287)
T ss_dssp             SCTTEEEEECCSSC
T ss_pred             CCCCcEEEecCCCc
Confidence            56899999998853

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.88  E-value=4.2e-22  Score=164.29  Aligned_cols=194  Identities=14%  Similarity=0.139  Sum_probs=149.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|+||++++++|.++|++|++++|                  .++|++|++++.+++++.     ++|+|||+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r------------------~~~D~~d~~~~~~~~~~~-----~~d~vi~~   63 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK------------------KLLDITNISQVQQVVQEI-----RPHIIIHC   63 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECT------------------TTSCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecc------------------cccCCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            8999999999999999999999999999998                  248999999999999876     79999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC---------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ---------  156 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~---------  156 (254)
                      |+.....          ...++++..+++|+.++.++++++...           ..++|++||...+.+.         
T Consensus        64 a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~~~v~~SS~~vy~~~~~~~~~E~~  122 (287)
T 3sc6_A           64 AAYTKVD----------QAEKERDLAYVINAIGARNVAVASQLV-----------GAKLVYISTDYVFQGDRPEGYDEFH  122 (287)
T ss_dssp             CCCCCHH----------HHTTCHHHHHHHHTHHHHHHHHHHHHH-----------TCEEEEEEEGGGSCCCCSSCBCTTS
T ss_pred             CcccChH----------HHhcCHHHHHHHHHHHHHHHHHHHHHc-----------CCeEEEEchhhhcCCCCCCCCCCCC
Confidence            9975321          122467788999999999999887553           2479999998766332         


Q ss_pred             --CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCC------CCCCCCHHHHH
Q psy12833        157 --SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA------PQRLGHPDEFA  228 (254)
Q Consensus       157 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va  228 (254)
                        .+...|+.+|.+.+.+++.++.       +++.++|+.+.++.................+.      ...+++++|+|
T Consensus       123 ~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  195 (287)
T 3sc6_A          123 NPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLN  195 (287)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHH
Confidence              2456899999999999887643       45889999998765444333333333222111      13456799999


Q ss_pred             HHHHHHhcCCCcccceEEecCCcc
Q psy12833        229 QLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       229 ~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      ++++.++..+.  ++.+++.+|..
T Consensus       196 ~~~~~~~~~~~--~~~~~i~~~~~  217 (287)
T 3sc6_A          196 VMINKLIHTSL--YGTYHVSNTGS  217 (287)
T ss_dssp             HHHHHHHTSCC--CEEEECCCBSC
T ss_pred             HHHHHHHhCCC--CCeEEEcCCCc
Confidence            99999998765  67899887753

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=5.8e-24  Score=168.11  Aligned_cols=197  Identities=13%  Similarity=0.087  Sum_probs=148.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      .+++++||||+|+||++++++|+++|+  +|++++|+.+.       ...++.++.+|++|++++.+++         +|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------~~~~~~~~~~D~~~~~~~~~~~---------~d   67 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLDNPVGPLAELLPQLDGS---------ID   67 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEECCBSCHHHHGGGCCSC---------CS
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------cCCCceEEeccccCHHHHHHhh---------hc
Confidence            468999999999999999999999998  99999998765       1346788899999887666554         89


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||+|....            +.+++++.+++|+.++..+++++.+.    .      .+++|++||.....+  +..
T Consensus        68 ~vi~~a~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v~~Ss~~~~~~--~~~  123 (215)
T 2a35_A           68 TAFCCLGTTIK------------EAGSEEAFRAVDFDLPLAVGKRALEM----G------ARHYLVVSALGADAK--SSI  123 (215)
T ss_dssp             EEEECCCCCHH------------HHSSHHHHHHHHTHHHHHHHHHHHHT----T------CCEEEEECCTTCCTT--CSS
T ss_pred             EEEECeeeccc------------cCCCHHHHHHhhHHHHHHHHHHHHHc----C------CCEEEEECCcccCCC--Ccc
Confidence            99999996421            23456788899999999998886542    2      468999999887654  345


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcE-EEEEecCCcccccccc-chHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHHh
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIR-VNTIAPGLFDTPLLSM-LNEKVRNFLARSIPA---PQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~-v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~va~~~~~l~  235 (254)
                      .|+.+|++.+.+++.       .|++ ++.++||.+.++.... ..+...   ....+.   ....++++|+|+.++.++
T Consensus       124 ~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~Dva~~~~~~~  193 (215)
T 2a35_A          124 FYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILA---APIARILPGKYHGIEACDLARALWRLA  193 (215)
T ss_dssp             HHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTT---CCCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHH---HhhhhccCCCcCcEeHHHHHHHHHHHH
Confidence            899999999988765       3898 9999999998875431 111100   000111   023568899999999999


Q ss_pred             cCCCcccceEEecCCc
Q psy12833        236 TNPLINGEVIRIDGAL  251 (254)
Q Consensus       236 ~~~~~~G~~i~~~gG~  251 (254)
                      ..+.  ++.+++.++.
T Consensus       194 ~~~~--~~~~~i~~~~  207 (215)
T 2a35_A          194 LEEG--KGVRFVESDE  207 (215)
T ss_dssp             TCCC--SEEEEEEHHH
T ss_pred             hcCC--CCceEEcHHH
Confidence            8664  7788887664

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.88  E-value=1.6e-21  Score=159.62  Aligned_cols=193  Identities=15%  Similarity=0.094  Sum_probs=141.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|+||++++++|+ +|++|++++|+.+..        .+   +.+|++|++++.++++..     ++|++|||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~--------~~---~~~Dl~~~~~~~~~~~~~-----~~d~vi~~   64 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ--------GG---YKLDLTDFPRLEDFIIKK-----RPDVIINA   64 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT--------TC---EECCTTSHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC--------CC---ceeccCCHHHHHHHHHhc-----CCCEEEEC
Confidence            69999999999999999999 589999999987421        12   889999999999998876     79999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC--------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS--------  157 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~--------  157 (254)
                      ||.....          ...+++++.+++|+.++.++++++.+    .       .+++|++||...+.+.+        
T Consensus        65 a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~----~-------~~~iv~~SS~~~~~~~~~~~~e~~~  123 (273)
T 2ggs_A           65 AAMTDVD----------KCEIEKEKAYKINAEAVRHIVRAGKV----I-------DSYIVHISTDYVFDGEKGNYKEEDI  123 (273)
T ss_dssp             CCCCCHH----------HHHHCHHHHHHHHTHHHHHHHHHHHH----T-------TCEEEEEEEGGGSCSSSCSBCTTSC
T ss_pred             CcccChh----------hhhhCHHHHHHHhHHHHHHHHHHHHH----h-------CCeEEEEecceeEcCCCCCcCCCCC
Confidence            9964321          23467889999999999999998864    2       35899999998775432        


Q ss_pred             --CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCC-----CCCCCCHHHHHHH
Q psy12833        158 --GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA-----PQRLGHPDEFAQL  230 (254)
Q Consensus       158 --~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~va~~  230 (254)
                        +...|+.+|++.+.+++.    +     ....++|+.+..+  ........+......+.     ...+++++|+|+.
T Consensus       124 ~~~~~~Y~~sK~~~e~~~~~----~-----~~~~iR~~~v~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  192 (273)
T 2ggs_A          124 PNPINYYGLSKLLGETFALQ----D-----DSLIIRTSGIFRN--KGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASA  192 (273)
T ss_dssp             CCCSSHHHHHHHHHHHHHCC----T-----TCEEEEECCCBSS--SSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHhC----C-----CeEEEeccccccc--cHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHH
Confidence              356899999999998876    2     2344555555421  11112222222221110     1467899999999


Q ss_pred             HHHHhcCCCcccceEEecC
Q psy12833        231 VQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       231 ~~~l~~~~~~~G~~i~~~g  249 (254)
                      ++++++.+. +| +++++|
T Consensus       193 i~~~~~~~~-~g-~~~i~~  209 (273)
T 2ggs_A          193 ILELLELRK-TG-IIHVAG  209 (273)
T ss_dssp             HHHHHHHTC-CE-EEECCC
T ss_pred             HHHHHhcCc-CC-eEEECC
Confidence            999997543 45 788877

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=1.6e-21  Score=162.34  Aligned_cols=211  Identities=14%  Similarity=0.099  Sum_probs=152.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchh--HHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          6 VGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEG--ESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++|||||+|+||++++++|+++| ++|++++|+....  ... .    ++. +.+|++|.++++++++...  ++++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~----~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-V----DLN-IADYMDKEDFLIQIMAGEE--FGDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH-H----TSC-CSEEEEHHHHHHHHHTTCC--CSSCCEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc-C----cce-eccccccHHHHHHHHhccc--cCCCcEE
Confidence            48999999999999999999999 8999999976543  221 1    223 7789999888877765210  2369999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC-----
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-----  157 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~-----  157 (254)
                      ||||+....            ..++++..+++|+.++.++++++.+.    .      . ++|++||...+.+.+     
T Consensus        73 i~~a~~~~~------------~~~~~~~~~~~n~~~~~~l~~a~~~~----~------~-~~v~~SS~~v~g~~~~~~~~  129 (310)
T 1eq2_A           73 FHEGACSST------------TEWDGKYMMDNNYQYSKELLHYCLER----E------I-PFLYASSAATYGGRTSDFIE  129 (310)
T ss_dssp             EECCSCCCT------------TCCCHHHHHHHTHHHHHHHHHHHHHH----T------C-CEEEEEEGGGGTTCCSCBCS
T ss_pred             EECcccccC------------cccCHHHHHHHHHHHHHHHHHHHHHc----C------C-eEEEEeeHHHhCCCCCCCCC
Confidence            999996432            12345778999999999999887653    2      4 799999987654322     


Q ss_pred             ------CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------cchHHHHHHHHhcCC-----C---
Q psy12833        158 ------GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------MLNEKVRNFLARSIP-----A---  217 (254)
Q Consensus       158 ------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~~~~~~~~~~-----~---  217 (254)
                            +...|+.+|.+.+.+++.++.+   .|++++.++||.+.++...      .....+........+     .   
T Consensus       130 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  206 (310)
T 1eq2_A          130 SREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN  206 (310)
T ss_dssp             SGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC------------
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCc
Confidence                  2568999999999999988765   4899999999999887543      112222222211110     0   


Q ss_pred             -CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 -PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 -~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                       ...+++++|+|++++.++..+.  |+.+++.+|..
T Consensus       207 ~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~  240 (310)
T 1eq2_A          207 FKRDFVYVGDVADVNLWFLENGV--SGIFNLGTGRA  240 (310)
T ss_dssp             -CBCEEEHHHHHHHHHHHHHHCC--CEEEEESCSCC
T ss_pred             ceEccEEHHHHHHHHHHHHhcCC--CCeEEEeCCCc
Confidence             1345789999999999997554  88999988754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.87  E-value=1.5e-20  Score=173.16  Aligned_cols=224  Identities=16%  Similarity=0.084  Sum_probs=157.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH----HhCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK----ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++++++|||||+|+||++++++|+++|++|++++|+.....+..+    ....++.++.+|++|++++.+++++.     
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-----   83 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----   83 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-----
Confidence            467999999999999999999999999999999987654322211    12567889999999999998888753     


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC--
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--  155 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~--  155 (254)
                      ++|+||||||......          ..+.....+++|+.++.++++++..    ..      .++||++||...+..  
T Consensus        84 ~~D~Vih~A~~~~~~~----------~~~~~~~~~~~Nv~gt~~ll~a~~~----~~------~~~iV~~SS~~vyg~~~  143 (699)
T 1z45_A           84 KIDSVIHFAGLKAVGE----------STQIPLRYYHNNILGTVVLLELMQQ----YN------VSKFVFSSSATVYGDAT  143 (699)
T ss_dssp             CCCEEEECCSCCCHHH----------HHHSHHHHHHHHHHHHHHHHHHHHH----HT------CCEEEEEEEGGGGCCGG
T ss_pred             CCCEEEECCcccCcCc----------cccCHHHHHHHHHHHHHHHHHHHHH----cC------CCEEEEECcHHHhCCCc
Confidence            7999999999653211          1223456789999999998776543    22      468999999875421  


Q ss_pred             -------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc------------ccchHHHHHH
Q psy12833        156 -------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNF  210 (254)
Q Consensus       156 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~------------~~~~~~~~~~  210 (254)
                                   ..+...|+.+|++.+.+++.++.++ ..++++..++|+.+..+..            ..+.......
T Consensus       144 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~  222 (699)
T 1z45_A          144 RFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQV  222 (699)
T ss_dssp             GSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHH
T ss_pred             cccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHH
Confidence                         1235689999999999999998875 4689999999877654321            1112222222


Q ss_pred             HHh---cCCCC------------CCCCCHHHHHHHHHHHhcC------CCcccceEEecCCc
Q psy12833        211 LAR---SIPAP------------QRLGHPDEFAQLVQSIITN------PLINGEVIRIDGAL  251 (254)
Q Consensus       211 ~~~---~~~~~------------~~~~~~~~va~~~~~l~~~------~~~~G~~i~~~gG~  251 (254)
                      ...   .++..            ..+++++|+|++++.++..      ....|+++++.+|.
T Consensus       223 ~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~  284 (699)
T 1z45_A          223 AVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGK  284 (699)
T ss_dssp             HTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSC
T ss_pred             HhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCC
Confidence            211   11111            1346899999999988852      12346788887765

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.87  E-value=5.9e-21  Score=159.52  Aligned_cols=208  Identities=15%  Similarity=0.177  Sum_probs=151.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc--CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          6 VGLVTGGASGLGKATVERIVRE--GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++|||||+|+||++++++|+++  |++|++++|+....+        ++.++.+|++|++++.+++++.     ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------~~~~~~~D~~d~~~~~~~~~~~-----~~d~vi   67 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------GIKFITLDVSNRDEIDRAVEKY-----SIDAIF   67 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------TCCEEECCTTCHHHHHHHHHHT-----TCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------CceEEEecCCCHHHHHHHHhhc-----CCcEEE
Confidence            4899999999999999999998  899999998765432        4678999999999998888753     799999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-------
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-------  156 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-------  156 (254)
                      |||+....           ...++++..+++|+.++.++++++.+    ..      .+++|++||...+.+.       
T Consensus        68 h~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~------~~~~v~~SS~~~~~~~~~~~~~~  126 (317)
T 3ajr_A           68 HLAGILSA-----------KGEKDPALAYKVNMNGTYNILEAAKQ----HR------VEKVVIPSTIGVFGPETPKNKVP  126 (317)
T ss_dssp             ECCCCCHH-----------HHHHCHHHHHHHHHHHHHHHHHHHHH----TT------CCEEEEEEEGGGCCTTSCSSSBC
T ss_pred             ECCcccCC-----------ccccChHHHhhhhhHHHHHHHHHHHH----cC------CCEEEEecCHHHhCCCCCCCCcc
Confidence            99996421           12345678899999999999988764    22      4689999998876542       


Q ss_pred             -----CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------c-chHHHHHHHHhcC-C------C
Q psy12833        157 -----SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------M-LNEKVRNFLARSI-P------A  217 (254)
Q Consensus       157 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~-~~~~~~~~~~~~~-~------~  217 (254)
                           .+...|+.+|.+.+.+++.++.++   |++++.++|+.+..+...      . ....+........ +      .
T Consensus       127 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (317)
T 3ajr_A          127 SITITRPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNR  203 (317)
T ss_dssp             SSSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTC
T ss_pred             ccccCCCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccc
Confidence                 136789999999999999887654   799999986555442210      0 1111222221111 0      0


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCC---cccceEEecCC
Q psy12833        218 PQRLGHPDEFAQLVQSIITNPL---INGEVIRIDGA  250 (254)
Q Consensus       218 ~~~~~~~~~va~~~~~l~~~~~---~~G~~i~~~gG  250 (254)
                      ...+++++|+|++++.++..+.   .+|+.+++.|+
T Consensus       204 ~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          204 ALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             CEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             eeeeeEHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence            1234689999999999986532   35789998763

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.87  E-value=1.1e-21  Score=162.66  Aligned_cols=199  Identities=11%  Similarity=0.030  Sum_probs=149.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|+||++++++|. +|++|++++|+..              ++.+|++|++++.++++..     ++|++||+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------~~~~D~~d~~~~~~~~~~~-----~~d~vih~   61 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------EFCGDFSNPKGVAETVRKL-----RPDVIVNA   61 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------SSCCCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------cccccCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            69999999999999999999 8999999999752              4679999999999888865     69999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC---------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ---------  156 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~---------  156 (254)
                      |+.....          ...++++..+++|+.++.++++++..    .       ..++|++||...+.+.         
T Consensus        62 a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~a~~~----~-------~~~~v~~SS~~vy~~~~~~~~~E~~  120 (299)
T 1n2s_A           62 AAHTAVD----------KAESEPELAQLLNATSVEAIAKAANE----T-------GAWVVHYSTDYVFPGTGDIPWQETD  120 (299)
T ss_dssp             CCCCCHH----------HHTTCHHHHHHHHTHHHHHHHHHHTT----T-------TCEEEEEEEGGGSCCCTTCCBCTTS
T ss_pred             cccCCHh----------hhhcCHHHHHHHHHHHHHHHHHHHHH----c-------CCcEEEEecccEEeCCCCCCCCCCC
Confidence            9964321          12245677889999999999887743    2       2379999998765432         


Q ss_pred             --CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCC------CCCCCCHHHHH
Q psy12833        157 --SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA------PQRLGHPDEFA  228 (254)
Q Consensus       157 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va  228 (254)
                        .+...|+.+|.+.+.+++.++.       +++.++|+.+.++.................+.      ...+++++|+|
T Consensus       121 ~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  193 (299)
T 1n2s_A          121 ATSPLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLA  193 (299)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHH
Confidence              2356899999999999887642       78999999998875443333333333322211      13455799999


Q ss_pred             HHHHHHhcCC--Cc-ccceEEecCCcc
Q psy12833        229 QLVQSIITNP--LI-NGEVIRIDGALR  252 (254)
Q Consensus       229 ~~~~~l~~~~--~~-~G~~i~~~gG~~  252 (254)
                      +++..++..+  .. .|+.+++.+|..
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~i~~~~~  220 (299)
T 1n2s_A          194 DCTAHAIRVALNKPEVAGLYHLVAGGT  220 (299)
T ss_dssp             HHHHHHHHHHHHCGGGCEEEECCCBSC
T ss_pred             HHHHHHHHHhccccccCceEEEeCCCC
Confidence            9999999754  33 588999988753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.86  E-value=7.6e-21  Score=156.54  Aligned_cols=194  Identities=13%  Similarity=0.148  Sum_probs=139.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc--CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          6 VGLVTGGASGLGKATVERIVRE--GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++|||||+|+||++++++|+++  |++|++++|+.+..+.+..   .++.++.+|++|++++.++++       ++|++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~-------~~d~vi   70 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA---QGITVRQADYGDEAALTSALQ-------GVEKLL   70 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH---TTCEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc---CCCeEEEcCCCCHHHHHHHHh-------CCCEEE
Confidence            4899999999999999999998  9999999998877665433   468899999999998888775       689999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      |+++...               +       .|+.+..++++++.    +..      .+++|++||..+. +  ....|+
T Consensus        71 ~~a~~~~---------------~-------~~~~~~~~l~~a~~----~~~------~~~~v~~Ss~~~~-~--~~~~y~  115 (286)
T 2zcu_A           71 LISSSEV---------------G-------QRAPQHRNVINAAK----AAG------VKFIAYTSLLHAD-T--SPLGLA  115 (286)
T ss_dssp             ECC------------------------------CHHHHHHHHHH----HHT------CCEEEEEEETTTT-T--CCSTTH
T ss_pred             EeCCCCc---------------h-------HHHHHHHHHHHHHH----HcC------CCEEEEECCCCCC-C--CcchhH
Confidence            9998420               0       24555555555443    333      4689999998776 2  224799


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHHhcCCCc
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP---APQRLGHPDEFAQLVQSIITNPLI  240 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~va~~~~~l~~~~~~  240 (254)
                      .+|.+.+.+++.       .|++++.++||++.++.............. ..+   ....+++++|+|+.+..++..+..
T Consensus       116 ~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  187 (286)
T 2zcu_A          116 DEHIETEKMLAD-------SGIVYTLLRNGWYSENYLASAPAALEHGVF-IGAAGDGKIASATRADYAAAAARVISEAGH  187 (286)
T ss_dssp             HHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTTHHHHHHHTEE-EESCTTCCBCCBCHHHHHHHHHHHHHSSSC
T ss_pred             HHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHHhHHhhcCCce-eccCCCCccccccHHHHHHHHHHHhcCCCC
Confidence            999999988763       489999999999877653222111111000 011   114578999999999999987656


Q ss_pred             ccceEEecCCcc
Q psy12833        241 NGEVIRIDGALR  252 (254)
Q Consensus       241 ~G~~i~~~gG~~  252 (254)
                      +|+.+++.||..
T Consensus       188 ~g~~~~i~~~~~  199 (286)
T 2zcu_A          188 EGKVYELAGDSA  199 (286)
T ss_dssp             TTCEEEECCSSC
T ss_pred             CCceEEEeCCCc
Confidence            899999998853

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.86  E-value=1.5e-20  Score=165.94  Aligned_cols=216  Identities=14%  Similarity=0.077  Sum_probs=155.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc---CCEEEEeeCCCchhHHHH---HH---------------hCCCceEEecCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVRE---GGRVVLCDLPTSEGESVA---KE---------------LGPDVKFAPVDVT   60 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~---g~~v~~~~r~~~~~~~~~---~~---------------~~~~~~~~~~Dls   60 (254)
                      .++++||||||+|+||++++++|+++   |++|++++|+.+......   +.               ...++.++.+|++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            35789999999999999999999999   999999999876432211   11               2368999999998


Q ss_pred             ------CHHHHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc
Q psy12833         61 ------SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENK  134 (254)
Q Consensus        61 ------~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  134 (254)
                            |.++++++++       ++|+|||||+....              +.++..+++|+.++.++++++..    ..
T Consensus       151 ~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------------~~~~~~~~~Nv~gt~~ll~aa~~----~~  205 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------------FPYHELFGPNVAGTAELIRIALT----TK  205 (478)
T ss_dssp             SGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------------SSCCEEHHHHHHHHHHHHHHHTS----SS
T ss_pred             CcccCCCHHHHHHHHc-------CCCEEEECccccCC--------------cCHHHHHHHHHHHHHHHHHHHHh----CC
Confidence                  6667777766       58999999997532              12235688999999999887653    22


Q ss_pred             CCCCCCCcEEEEEeccccccCCCC----------------------CccchhchHHHHHhHHHHHHHhccCCcEEEEEec
Q psy12833        135 LNEDGLRGVIINTASIAAYEGQSG----------------------QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAP  192 (254)
Q Consensus       135 ~~~~~~~~~ii~vss~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~P  192 (254)
                            .+++|++||...+.....                      ...|+.+|.+.+.+++.++.+.   |++++.++|
T Consensus       206 ------~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRp  276 (478)
T 4dqv_A          206 ------LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRC  276 (478)
T ss_dssp             ------CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEE
T ss_pred             ------CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEEC
Confidence                  358999999765433111                      1349999999999999988754   799999999


Q ss_pred             CCcccccc-----c--cchHHHHH-HHH-hcCCC--------------CCCCCCHHHHHHHHHHHhcC----CCcccceE
Q psy12833        193 GLFDTPLL-----S--MLNEKVRN-FLA-RSIPA--------------PQRLGHPDEFAQLVQSIITN----PLINGEVI  245 (254)
Q Consensus       193 g~~~t~~~-----~--~~~~~~~~-~~~-~~~~~--------------~~~~~~~~~va~~~~~l~~~----~~~~G~~i  245 (254)
                      |.+..+..     .  ........ ... +..|.              ...+++++|+|++++.++..    +...|++|
T Consensus       277 g~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~y  356 (478)
T 4dqv_A          277 GMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATY  356 (478)
T ss_dssp             CEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEE
T ss_pred             ceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceE
Confidence            99976422     1  11111111 111 12221              12457899999999999864    45678999


Q ss_pred             EecCCc
Q psy12833        246 RIDGAL  251 (254)
Q Consensus       246 ~~~gG~  251 (254)
                      ++.++.
T Consensus       357 nv~~~~  362 (478)
T 4dqv_A          357 HVMNPH  362 (478)
T ss_dssp             EESCCC
T ss_pred             EecCCC
Confidence            997764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.86  E-value=4.6e-22  Score=164.09  Aligned_cols=201  Identities=14%  Similarity=0.074  Sum_probs=147.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+++++|||| +|+||++++++|.++|++|++++|+.+..       ..++.++.+|++|++++.++++      +++|+
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~------~~~d~   66 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------PAGVQTLIADVTRPDTLASIVH------LRPEI   66 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------CTTCCEEECCTTCGGGCTTGGG------GCCSE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------ccCCceEEccCCChHHHHHhhc------CCCCE
Confidence            3567899999 59999999999999999999999987653       3678999999999998887765      36999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-----
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-----  156 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-----  156 (254)
                      |||+|+..               ..+.+..+++|+.++.++++++.    +..      .+++|++||...+...     
T Consensus        67 vih~a~~~---------------~~~~~~~~~~n~~~~~~ll~a~~----~~~------~~~~v~~SS~~vyg~~~~~~~  121 (286)
T 3gpi_A           67 LVYCVAAS---------------EYSDEHYRLSYVEGLRNTLSALE----GAP------LQHVFFVSSTGVYGQEVEEWL  121 (286)
T ss_dssp             EEECHHHH---------------HHC-----CCSHHHHHHHHHHTT----TSC------CCEEEEEEEGGGCCCCCSSEE
T ss_pred             EEEeCCCC---------------CCCHHHHHHHHHHHHHHHHHHHh----hCC------CCEEEEEcccEEEcCCCCCCC
Confidence            99999852               13345667889999888887765    222      4799999998765432     


Q ss_pred             ------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCC---CCCCCCCHHHH
Q psy12833        157 ------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP---APQRLGHPDEF  227 (254)
Q Consensus       157 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v  227 (254)
                            .+...|+.+|.+.+.+ +..        ++++.++|+.+..+..........+  .....   ....+++++|+
T Consensus       122 ~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~Dv  190 (286)
T 3gpi_A          122 DEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQT--PEQWPARNAWTNRIHRDDG  190 (286)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTC--GGGSCSSBCEECEEEHHHH
T ss_pred             CCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHh--cccCCCcCceeEEEEHHHH
Confidence                  2356899999998887 542        8899999999988765422222111  11111   11346789999


Q ss_pred             HHHHHHHhcCC--CcccceEEecCCcc
Q psy12833        228 AQLVQSIITNP--LINGEVIRIDGALR  252 (254)
Q Consensus       228 a~~~~~l~~~~--~~~G~~i~~~gG~~  252 (254)
                      |++++.++..+  ...|+++++.+|..
T Consensus       191 a~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (286)
T 3gpi_A          191 AAFIAYLIQQRSHAVPERLYIVTDNQP  217 (286)
T ss_dssp             HHHHHHHHHHHTTSCCCSEEEECCSCC
T ss_pred             HHHHHHHHhhhccCCCCceEEEeCCCC
Confidence            99999999753  56799999988753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.85  E-value=9.3e-21  Score=168.45  Aligned_cols=212  Identities=19%  Similarity=0.158  Sum_probs=154.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh---HHHH------------HHhCCCceEEecCCCCHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG---ESVA------------KELGPDVKFAPVDVTSEEDVQKA   68 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~---~~~~------------~~~~~~~~~~~~Dls~~~~~~~~   68 (254)
                      .+++|||||||+||++++++|.++|++|+++.|+....   +++.            .....++.++.+|++|++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            37899999999999999999999999999999987732   2221            122578999999999988776  


Q ss_pred             HHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEe
Q psy12833         69 VLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA  148 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vs  148 (254)
                            ...++|+|||||+...             ....+...+++|+.++.++++++..     .      .+++|++|
T Consensus       228 ------~~~~~D~Vih~Aa~~~-------------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~------~~~~v~iS  277 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD-------------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H------HARLIYVS  277 (508)
T ss_dssp             ------CSSCCSEEEECCCC---------------------CCHHHHHHHHHHHHHHHHT-----T------TCEEEEEE
T ss_pred             ------CccCCCEEEECCceec-------------CCCCHHHHhhhHHHHHHHHHHHHHh-----C------CCcEEEeC
Confidence                  3458999999999642             1234567788999999999988765     1      46899999


Q ss_pred             cccc--cc----------------CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-------
Q psy12833        149 SIAA--YE----------------GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-------  203 (254)
Q Consensus       149 s~~~--~~----------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-------  203 (254)
                      |...  ..                +..+...|+.+|.+.+.+++.++.    .|++++.++||.+.++.....       
T Consensus       278 S~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~  353 (508)
T 4f6l_B          278 TISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKT  353 (508)
T ss_dssp             ESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTT
T ss_pred             ChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcch
Confidence            9877  10                011457899999999999887653    589999999999977654321       


Q ss_pred             --hHHHHHHHHhc--CCC-----CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        204 --NEKVRNFLARS--IPA-----PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       204 --~~~~~~~~~~~--~~~-----~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                        ...........  ++.     ...+++++|+|++++.++..+. .|+++++.+|..
T Consensus       354 ~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~-~~~~~nl~~~~~  410 (508)
T 4f6l_B          354 NRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSPNK  410 (508)
T ss_dssp             CHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC-SCSEEEESCSCE
T ss_pred             HHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC-CCCEEEeCCCCC
Confidence              11222222211  111     0236689999999999997665 899999988764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.85  E-value=6.7e-21  Score=158.76  Aligned_cols=210  Identities=14%  Similarity=0.110  Sum_probs=150.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+++++|||||+|+||++++++|.++|+      +....        ...+.++.+|++|++++.++++..     ++|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~   64 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED--------WVFVSSKDADLTDTAQTRALFEKV-----QPTH   64 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE--------EEECCTTTCCTTSHHHHHHHHHHS-----CCSE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc--------ccccCceecccCCHHHHHHHHhhc-----CCCE
Confidence            5678999999999999999999999998      11111        123455689999999999988753     6999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG------  155 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~------  155 (254)
                      |||+|+......         ...++....+++|+.++.++++++...    .      .+++|++||...+..      
T Consensus        65 Vih~A~~~~~~~---------~~~~~~~~~~~~nv~gt~~ll~a~~~~----~------~~~~v~~SS~~vyg~~~~~~~  125 (319)
T 4b8w_A           65 VIHLAAMVGGLF---------RNIKYNLDFWRKNVHMNDNVLHSAFEV----G------ARKVVSCLSTCIFPDKTTYPI  125 (319)
T ss_dssp             EEECCCCCCCHH---------HHTTCHHHHHHHHHHHHHHHHHHHHHT----T------CSEEEEECCGGGSCSSCCSSB
T ss_pred             EEECceeccccc---------ccccCHHHHHHHHHHHHHHHHHHHHHc----C------CCeEEEEcchhhcCCCCCCCc
Confidence            999999743111         123445678999999999998877542    2      358999999876532      


Q ss_pred             ----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------chHHHHHH----HHhcC
Q psy12833        156 ----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------LNEKVRNF----LARSI  215 (254)
Q Consensus       156 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------~~~~~~~~----~~~~~  215 (254)
                                .|....|+.+|.+.+.+++.++++.   +++++.++|+.+..+....      ..+.+...    .....
T Consensus       126 ~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (319)
T 4b8w_A          126 DETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGS  202 (319)
T ss_dssp             CGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTC
T ss_pred             cccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCC
Confidence                      1122259999999999999988765   7999999999998775431      11222222    22221


Q ss_pred             CC----C----CCCCCHHHHHHHHHHHhcC-CCcccceEEecCCcc
Q psy12833        216 PA----P----QRLGHPDEFAQLVQSIITN-PLINGEVIRIDGALR  252 (254)
Q Consensus       216 ~~----~----~~~~~~~~va~~~~~l~~~-~~~~G~~i~~~gG~~  252 (254)
                      +.    .    ..+++++|+|++++.++.. +...|+++++.+|..
T Consensus       203 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~  248 (319)
T 4b8w_A          203 ALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDE  248 (319)
T ss_dssp             CEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGC
T ss_pred             ceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCc
Confidence            11    0    2347999999999999964 456688898877653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.84  E-value=4.4e-21  Score=160.38  Aligned_cols=206  Identities=17%  Similarity=0.137  Sum_probs=145.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc----hhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS----EGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~----~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++++|||||+|+||++++++|+++|++|++++|+..    ..+.+.... ..++.++.+|++                 +
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------------~   69 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------------D   69 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------------T
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------------c
Confidence            689999999999999999999999999999999776    221111111 234666777765                 7


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--  156 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--  156 (254)
                      +|+|||+|+........          ++....++ |+.++.++++++...    .      .+++|++||...+...  
T Consensus        70 ~d~vi~~a~~~~~~~~~----------~~~~~~~~-n~~~~~~ll~a~~~~----~------v~~~v~~SS~~v~~~~~~  128 (321)
T 3vps_A           70 VRLVYHLASHKSVPRSF----------KQPLDYLD-NVDSGRHLLALCTSV----G------VPKVVVGSTCEVYGQADT  128 (321)
T ss_dssp             EEEEEECCCCCCHHHHT----------TSTTTTHH-HHHHHHHHHHHHHHH----T------CCEEEEEEEGGGGCSCSS
T ss_pred             CCEEEECCccCChHHHH----------hCHHHHHH-HHHHHHHHHHHHHHc----C------CCeEEEecCHHHhCCCCC
Confidence            89999999975432111          11223455 899998888887553    1      3689999998765432  


Q ss_pred             ---------CCCccchhchHHHHHhHHHHHHHhccCCc-EEEEEecCCcccccccc--chHHHHHHHHhcCC--C-----
Q psy12833        157 ---------SGQVAYSASKSGIVGMTLPMARDLAGAGI-RVNTIAPGLFDTPLLSM--LNEKVRNFLARSIP--A-----  217 (254)
Q Consensus       157 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~--~-----  217 (254)
                               .+...|+.+|.+.+.+++.++.+   .++ +++.++|+.+.++....  ....+........+  .     
T Consensus       129 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (321)
T 3vps_A          129 LPTPEDSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGE  205 (321)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSC
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCC
Confidence                     23578999999999999998875   478 99999999998775432  22222222222211  1     


Q ss_pred             -CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        218 -PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       218 -~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                       ...+++++|+|++++.++..+.. | .+++.+|..
T Consensus       206 ~~~~~v~v~Dva~~~~~~~~~~~~-g-~~~i~~~~~  239 (321)
T 3vps_A          206 QRRDFTYITDVVDKLVALANRPLP-S-VVNFGSGQS  239 (321)
T ss_dssp             CEECEEEHHHHHHHHHHGGGSCCC-S-EEEESCSCC
T ss_pred             ceEceEEHHHHHHHHHHHHhcCCC-C-eEEecCCCc
Confidence             02456999999999999986543 7 999988864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.82  E-value=5.3e-19  Score=145.89  Aligned_cols=195  Identities=17%  Similarity=0.105  Sum_probs=135.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++|||||||+||++++++|.++ |++|++++|+.++.+.+.   ..++.++.+|++|++++.++++       ++|++||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~---~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi~   71 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW---RGKVSVRQLDYFNQESMVEAFK-------GMDTVVF   71 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG---BTTBEEEECCTTCHHHHHHHTT-------TCSEEEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh---hCCCEEEEcCCCCHHHHHHHHh-------CCCEEEE
Confidence            5999999999999999999998 999999999887654432   3578999999999998888876       7899999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchh
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA  164 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~  164 (254)
                      |++...             ..       ..|+.+..    .+++.+.+..      .++||++||.......+    |..
T Consensus        72 ~a~~~~-------------~~-------~~~~~~~~----~l~~aa~~~g------v~~iv~~Ss~~~~~~~~----~~~  117 (289)
T 3e48_A           72 IPSIIH-------------PS-------FKRIPEVE----NLVYAAKQSG------VAHIIFIGYYADQHNNP----FHM  117 (289)
T ss_dssp             CCCCCC-------------SH-------HHHHHHHH----HHHHHHHHTT------CCEEEEEEESCCSTTCC----STT
T ss_pred             eCCCCc-------------cc-------hhhHHHHH----HHHHHHHHcC------CCEEEEEcccCCCCCCC----Ccc
Confidence            998532             11       11444444    4444455443      46899999975433322    333


Q ss_pred             chHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCC----CCCHHHHHHHHHHHhcCCCc
Q psy12833        165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQR----LGHPDEFAQLVQSIITNPLI  240 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~va~~~~~l~~~~~~  240 (254)
                      ++..     ..+...+...|++++.++||++.+++...... ....-....+. +.    +++++|+|+.+..++.++..
T Consensus       118 ~~~~-----~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~-~~~~~~~~~~~-g~~~~~~i~~~Dva~~~~~~l~~~~~  190 (289)
T 3e48_A          118 SPYF-----GYASRLLSTSGIDYTYVRMAMYMDPLKPYLPE-LMNMHKLIYPA-GDGRINYITRNDIARGVIAIIKNPDT  190 (289)
T ss_dssp             HHHH-----HHHHHHHHHHCCEEEEEEECEESTTHHHHHHH-HHHHTEECCCC-TTCEEEEECHHHHHHHHHHHHHCGGG
T ss_pred             chhH-----HHHHHHHHHcCCCEEEEeccccccccHHHHHH-HHHCCCEecCC-CCceeeeEEHHHHHHHHHHHHcCCCc
Confidence            3321     12334445678999999999999876532221 11111111222 22    67999999999999987655


Q ss_pred             ccceEEecCCcc
Q psy12833        241 NGEVIRIDGALR  252 (254)
Q Consensus       241 ~G~~i~~~gG~~  252 (254)
                      .|+++++. |..
T Consensus       191 ~g~~~~~~-~~~  201 (289)
T 3e48_A          191 WGKRYLLS-GYS  201 (289)
T ss_dssp             TTCEEEEC-CEE
T ss_pred             CCceEEeC-CCc
Confidence            59999998 654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.82  E-value=4.7e-20  Score=152.97  Aligned_cols=205  Identities=14%  Similarity=0.072  Sum_probs=138.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |...+++|||||||+||++++++|+++| ++|++++|+.+....  +++ ..++.++.+|++|++++.++++       +
T Consensus         2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~~~~~~~~D~~d~~~l~~~~~-------~   72 (299)
T 2wm3_A            2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQGAEVVQGDQDDQVIMELALN-------G   72 (299)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHTTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHCCCEEEEecCCCHHHHHHHHh-------c
Confidence            4346899999999999999999999999 999999998765421  111 2468899999999999888876       6


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc--CC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE--GQ  156 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~--~~  156 (254)
                      +|++|||++....           ..       .+.|+.+..    .+++.+.+..      .++||++|+.....  +.
T Consensus        73 ~d~vi~~a~~~~~-----------~~-------~~~~~~~~~----~~~~aa~~~g------v~~iv~~S~~~~~~~~~~  124 (299)
T 2wm3_A           73 AYATFIVTNYWES-----------CS-------QEQEVKQGK----LLADLARRLG------LHYVVYSGLENIKKLTAG  124 (299)
T ss_dssp             CSEEEECCCHHHH-----------TC-------HHHHHHHHH----HHHHHHHHHT------CSEEEECCCCCHHHHTTT
T ss_pred             CCEEEEeCCCCcc-----------cc-------chHHHHHHH----HHHHHHHHcC------CCEEEEEcCccccccCCC
Confidence            8999999984210           01       223444444    4444444443      46899966644332  11


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHH---HhcCCCC---CCCCCHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL---ARSIPAP---QRLGHPDEFAQL  230 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~va~~  230 (254)
                      +....|..+|.+++.+.+.       .|++++.++||++.++......+.....-   .-..|..   ..+++++|+|+.
T Consensus       125 ~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~  197 (299)
T 2wm3_A          125 RLAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPV  197 (299)
T ss_dssp             SCCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHH
T ss_pred             cccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHH
Confidence            2246799999999988764       37999999999998876432110000000   0001110   245699999999


Q ss_pred             HHHHhcCC-CcccceEEecC
Q psy12833        231 VQSIITNP-LINGEVIRIDG  249 (254)
Q Consensus       231 ~~~l~~~~-~~~G~~i~~~g  249 (254)
                      +..++.++ ...|+.+++.|
T Consensus       198 ~~~~l~~~~~~~g~~~~~~g  217 (299)
T 2wm3_A          198 VLSLLKMPEKYVGQNIGLST  217 (299)
T ss_dssp             HHHHHHSHHHHTTCEEECCS
T ss_pred             HHHHHcChhhhCCeEEEeee
Confidence            99999763 34789999876

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.79  E-value=1.2e-18  Score=143.44  Aligned_cols=192  Identities=9%  Similarity=-0.016  Sum_probs=136.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      +++||||| |.||++++++|.++|++|++++|+.+..+.+..   .++.++.+|++|.+            +.++|+|||
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~------------~~~~d~vi~   69 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---SGAEPLLWPGEEPS------------LDGVTHLLI   69 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---TTEEEEESSSSCCC------------CTTCCEEEE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---CCCeEEEecccccc------------cCCCCEEEE
Confidence            68999998 999999999999999999999999877665543   56899999999832            458999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--ccCCCCCCCcEEEEEeccccccCC------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHE--NKLNEDGLRGVIINTASIAAYEGQ------  156 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~~~~ii~vss~~~~~~~------  156 (254)
                      +|+.....           ..  .              .+.++..+.+  ..      .+++|++||...+...      
T Consensus        70 ~a~~~~~~-----------~~--~--------------~~~l~~a~~~~~~~------~~~~v~~Ss~~vyg~~~~~~~~  116 (286)
T 3ius_A           70 STAPDSGG-----------DP--V--------------LAALGDQIAARAAQ------FRWVGYLSTTAVYGDHDGAWVD  116 (286)
T ss_dssp             CCCCBTTB-----------CH--H--------------HHHHHHHHHHTGGG------CSEEEEEEEGGGGCCCTTCEEC
T ss_pred             CCCccccc-----------cH--H--------------HHHHHHHHHhhcCC------ceEEEEeecceecCCCCCCCcC
Confidence            99864321           10  0              1233344443  22      4689999998765322      


Q ss_pred             -----CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHh--cCCCCCCCCCHHHHHH
Q psy12833        157 -----SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR--SIPAPQRLGHPDEFAQ  229 (254)
Q Consensus       157 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~  229 (254)
                           .+...|+.+|.+.+.+.+.+      .+++++.++|+.+..+...............  .......+++++|+|+
T Consensus       117 E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  190 (286)
T 3ius_A          117 ETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQ  190 (286)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHH
Confidence                 23457999999999988776      6899999999999876543221100000000  0001135678899999


Q ss_pred             HHHHHhcCCCcccceEEecCCcc
Q psy12833        230 LVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       230 ~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      +++.++..+. .|+.+++.+|..
T Consensus       191 a~~~~~~~~~-~g~~~~i~~~~~  212 (286)
T 3ius_A          191 VLAASMARPD-PGAVYNVCDDEP  212 (286)
T ss_dssp             HHHHHHHSCC-TTCEEEECCSCC
T ss_pred             HHHHHHhCCC-CCCEEEEeCCCC
Confidence            9999998765 789999988764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.78  E-value=4e-18  Score=144.91  Aligned_cols=210  Identities=11%  Similarity=0.013  Sum_probs=143.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcC-----CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREG-----GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++++|||||+|+||++++++|+++|     ++|++++|+.....    ....++.++.+|++|++++.++++..    .+
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~   72 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----HEDNPINYVQCDISDPDDSQAKLSPL----TD   72 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----CCSSCCEEEECCTTSHHHHHHHHTTC----TT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----cccCceEEEEeecCCHHHHHHHHhcC----CC
Confidence            5789999999999999999999999     99999999876543    11356889999999999888777632    24


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEE-------EEeccc
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVII-------NTASIA  151 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii-------~vss~~  151 (254)
                      +|++||+|+...               ++....+++|+.++.++++++.+...  .      -.+++       ++||..
T Consensus        73 ~d~vih~a~~~~---------------~~~~~~~~~n~~~~~~l~~a~~~~~~--~------~~~~v~~~g~~i~~Ss~~  129 (364)
T 2v6g_A           73 VTHVFYVTWANR---------------STEQENCEANSKMFRNVLDAVIPNCP--N------LKHISLQTGRKHYMGPFE  129 (364)
T ss_dssp             CCEEEECCCCCC---------------SSHHHHHHHHHHHHHHHHHHHTTTCT--T------CCEEEEECCTHHHHCCGG
T ss_pred             CCEEEECCCCCc---------------chHHHHHHHhHHHHHHHHHHHHHhcc--c------cceEEeccCceEEEechh
Confidence            999999999541               23567889999999999888765311  1      24565       688875


Q ss_pred             cccCC--------------CCCccchhchHHHHHhHHHHHHHhccCC-cEEEEEecCCccccccccc----hHH-HHHHH
Q psy12833        152 AYEGQ--------------SGQVAYSASKSGIVGMTLPMARDLAGAG-IRVNTIAPGLFDTPLLSML----NEK-VRNFL  211 (254)
Q Consensus       152 ~~~~~--------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~-i~v~~v~Pg~~~t~~~~~~----~~~-~~~~~  211 (254)
                      .+...              +....|    .+.+.+++.++.   ..+ +++..++|+.+..+.....    ... ....+
T Consensus       130 vyg~~~~~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~  202 (364)
T 2v6g_A          130 SYGKIESHDPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAI  202 (364)
T ss_dssp             GTTTSCCCCSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHH
T ss_pred             hccccccCCCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHH
Confidence            44221              112245    233444444332   245 9999999999987644321    111 22222


Q ss_pred             --HhcC--CCCC---------CCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        212 --ARSI--PAPQ---------RLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       212 --~~~~--~~~~---------~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                        ....  +.++         ...+++|+|++++.++..+...|+++++.+|.
T Consensus       203 ~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~  255 (364)
T 2v6g_A          203 CKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGD  255 (364)
T ss_dssp             HHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSC
T ss_pred             HHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCC
Confidence              1221  1112         23455999999999998765679999998775

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.78  E-value=1.9e-18  Score=146.70  Aligned_cols=202  Identities=12%  Similarity=0.065  Sum_probs=137.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh--HHHHHHhCCCceEEecC-CCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG--ESVAKELGPDVKFAPVD-VTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~D-ls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++++++||||||+||++++++|+++|++|++++|+.+..  +.+..  ..++.++.+| ++|++++.++++       +
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~--~~~v~~v~~D~l~d~~~l~~~~~-------~   73 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA--IPNVTLFQGPLLNNVPLMDTLFE-------G   73 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT--STTEEEEESCCTTCHHHHHHHHT-------T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh--cCCcEEEECCccCCHHHHHHHHh-------c
Confidence            3478999999999999999999999999999999987765  22211  2368889999 999999888776       6


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc-cccCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA-AYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~-~~~~~~  157 (254)
                      +|++|||++...            .         ..|..+ .+++++    +.+...     .++||++||.. ...+.+
T Consensus        74 ~d~Vi~~a~~~~------------~---------~~~~~~-~~l~~a----a~~~g~-----v~~~V~~SS~~~~~~~~~  122 (352)
T 1xgk_A           74 AHLAFINTTSQA------------G---------DEIAIG-KDLADA----AKRAGT-----IQHYIYSSMPDHSLYGPW  122 (352)
T ss_dssp             CSEEEECCCSTT------------S---------CHHHHH-HHHHHH----HHHHSC-----CSEEEEEECCCGGGTSSC
T ss_pred             CCEEEEcCCCCC------------c---------HHHHHH-HHHHHH----HHHcCC-----ccEEEEeCCccccccCCC
Confidence            899999987431            0         113333 444443    333210     25899999986 333334


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHH-H-HHHhc----CCC----CCCCCCH-HH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR-N-FLARS----IPA----PQRLGHP-DE  226 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~-~-~~~~~----~~~----~~~~~~~-~~  226 (254)
                      ....|..+|++.+.+++.+       +++++.++||++-.+........+. . ...+.    .+.    ...++++ +|
T Consensus       123 ~~~~y~~sK~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~D  195 (352)
T 1xgk_A          123 PAVPMWAPKFTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHD  195 (352)
T ss_dssp             CCCTTTHHHHHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHH
T ss_pred             CCccHHHHHHHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHH
Confidence            4568999999999988752       8999999999875543321000000 0 00000    010    0235678 89


Q ss_pred             HHHHHHHHhcCC--CcccceEEecCC
Q psy12833        227 FAQLVQSIITNP--LINGEVIRIDGA  250 (254)
Q Consensus       227 va~~~~~l~~~~--~~~G~~i~~~gG  250 (254)
                      +|+.+..++..+  ...|+.+++.++
T Consensus       196 va~ai~~~l~~~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          196 VGPALLQIFKDGPQKWNGHRIALTFE  221 (352)
T ss_dssp             HHHHHHHHHHHCHHHHTTCEEEECSE
T ss_pred             HHHHHHHHHhCCchhhCCeEEEEecC
Confidence            999999999753  457899998864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.77  E-value=2.6e-18  Score=146.59  Aligned_cols=188  Identities=19%  Similarity=0.126  Sum_probs=140.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++|||||+|+||++++++|+++|+ +|+..+|+                      +|+++++++++       ++|++||
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------~d~~~l~~~~~-------~~d~Vih   52 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------TKEEELESALL-------KADFIVH   52 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------CCHHHHHHHHH-------HCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------CCHHHHHHHhc-------cCCEEEE
Confidence            699999999999999999999998 88777664                      67888888887       4899999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchh
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA  164 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~  164 (254)
                      +|+.....              +....+++|+.++.++++++..    ..     ...++|++||.....    ...|+.
T Consensus        53 ~a~~~~~~--------------~~~~~~~~n~~~~~~l~~a~~~----~~-----~~~~~v~~Ss~~~~~----~~~Y~~  105 (369)
T 3st7_A           53 LAGVNRPE--------------HDKEFSLGNVSYLDHVLDILTR----NT-----KKPAILLSSSIQATQ----DNPYGE  105 (369)
T ss_dssp             CCCSBCTT--------------CSTTCSSSCCBHHHHHHHHHTT----CS-----SCCEEEEEEEGGGGS----CSHHHH
T ss_pred             CCcCCCCC--------------CHHHHHHHHHHHHHHHHHHHHH----hC-----CCCeEEEeCchhhcC----CCCchH
Confidence            99965321              2233466788888888776632    22     124899999988765    468999


Q ss_pred             chHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----chHHHHHHHHhcCCCC-------CCCCCHHHHHHHHHH
Q psy12833        165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----LNEKVRNFLARSIPAP-------QRLGHPDEFAQLVQS  233 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~~va~~~~~  233 (254)
                      +|.+.+.+++.++++.   |+++..++|+.+..+....    ....+........+..       ..+++++|+|++++.
T Consensus       106 sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  182 (369)
T 3st7_A          106 SKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKR  182 (369)
T ss_dssp             HHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHH
Confidence            9999999999988864   6899999999987764322    2333333333332211       235679999999999


Q ss_pred             HhcCCCcc-cceEEecCCcc
Q psy12833        234 IITNPLIN-GEVIRIDGALR  252 (254)
Q Consensus       234 l~~~~~~~-G~~i~~~gG~~  252 (254)
                      ++..+... |+++++.+|..
T Consensus       183 ~l~~~~~~~~~~~~i~~~~~  202 (369)
T 3st7_A          183 AIEGTPTIENGVPTVPNVFK  202 (369)
T ss_dssp             HHHTCCCEETTEECCSCCEE
T ss_pred             HHhCCcccCCceEEeCCCCc
Confidence            99765443 89999988754

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.76  E-value=5.2e-18  Score=143.52  Aligned_cols=201  Identities=6%  Similarity=0.002  Sum_probs=136.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc----hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS----EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+.+++|||||||+||++++++|+++|++|++++|+..    +.+.+......++.++.+|++|.+++.+++++.     
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence            34578999999999999999999999999999999872    222222222468999999999999999988764     


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc----
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY----  153 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~----  153 (254)
                      ++|+|||+++..                         |+.+..++++++...-   .      -.++++ |+....    
T Consensus        83 ~~d~Vi~~a~~~-------------------------n~~~~~~l~~aa~~~g---~------v~~~v~-S~~g~~~~e~  127 (346)
T 3i6i_A           83 EIDIVVSTVGGE-------------------------SILDQIALVKAMKAVG---T------IKRFLP-SEFGHDVNRA  127 (346)
T ss_dssp             TCCEEEECCCGG-------------------------GGGGHHHHHHHHHHHC---C------CSEEEC-SCCSSCTTTC
T ss_pred             CCCEEEECCchh-------------------------hHHHHHHHHHHHHHcC---C------ceEEee-cccCCCCCcc
Confidence            799999999851                         6666777776665431   0      235654 433222    


Q ss_pred             cCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHH-HHhcC--C----CCCCCCCHHH
Q psy12833        154 EGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNF-LARSI--P----APQRLGHPDE  226 (254)
Q Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~-~~~~~--~----~~~~~~~~~~  226 (254)
                      .+.++...|+.+|.+.+.+.+.       .|++++.++||.+............... ..+..  +    ....+++++|
T Consensus       128 ~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~D  200 (346)
T 3i6i_A          128 DPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTD  200 (346)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHH
T ss_pred             CcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHH
Confidence            1224557899999998877654       5899999999988775533222111000 00000  0    0134679999


Q ss_pred             HHHHHHHHhcCCCcccceEEecC
Q psy12833        227 FAQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       227 va~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      +|+.++.++.++...|+.+.+-|
T Consensus       201 va~~~~~~l~~~~~~~~~~~i~g  223 (346)
T 3i6i_A          201 IGKFTMKTVDDVRTLNKSVHFRP  223 (346)
T ss_dssp             HHHHHHHHTTCGGGTTEEEECCC
T ss_pred             HHHHHHHHHhCccccCeEEEEeC
Confidence            99999999987655577787754

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.75  E-value=3.7e-18  Score=141.88  Aligned_cols=195  Identities=13%  Similarity=0.104  Sum_probs=128.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-------chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-------SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++++||||||+||++++++|+++|++|++++|+.       ++.+.+......++.++++|++|++++.++++      
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~------   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT------
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh------
Confidence            46899999999999999999999999999999986       33333211113568899999999999888876      


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc--
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE--  154 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~--  154 (254)
                       ++|++|||++...                         +.+...+++++    .+...     -+++|  .|..+..  
T Consensus        76 -~~d~vi~~a~~~~-------------------------~~~~~~l~~aa----~~~g~-----v~~~v--~S~~g~~~~  118 (307)
T 2gas_A           76 -QVDIVICAAGRLL-------------------------IEDQVKIIKAI----KEAGN-----VKKFF--PSEFGLDVD  118 (307)
T ss_dssp             -TCSEEEECSSSSC-------------------------GGGHHHHHHHH----HHHCC-----CSEEE--CSCCSSCTT
T ss_pred             -CCCEEEECCcccc-------------------------cccHHHHHHHH----HhcCC-----ceEEe--ecccccCcc
Confidence             6899999998531                         22333444443    32210     24666  3443321  


Q ss_pred             ----CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHH-HHhcC---C---CCCCCCC
Q psy12833        155 ----GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNF-LARSI---P---APQRLGH  223 (254)
Q Consensus       155 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~-~~~~~---~---~~~~~~~  223 (254)
                          ..|....| .+|.+++.+.+.       .+++++.++||++.+++........... ..+..   .   ....+++
T Consensus       119 ~~~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  190 (307)
T 2gas_A          119 RHDAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVT  190 (307)
T ss_dssp             SCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEEC
T ss_pred             cccCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEee
Confidence                12224578 999998887753       3789999999999876543211100000 00000   0   0134569


Q ss_pred             HHHHHHHHHHHhcCCCcccceEEecC
Q psy12833        224 PDEFAQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       224 ~~~va~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      ++|+|+.+..++.++...|+.+.+.|
T Consensus       191 ~~Dva~~~~~~l~~~~~~~~~~~~~~  216 (307)
T 2gas_A          191 EADVGTFTIRAANDPNTLNKAVHIRL  216 (307)
T ss_dssp             HHHHHHHHHHHHTCGGGTTEEEECCC
T ss_pred             HHHHHHHHHHHHcCccccCceEEEeC
Confidence            99999999999986555578888765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.74  E-value=6.8e-17  Score=143.79  Aligned_cols=204  Identities=17%  Similarity=0.124  Sum_probs=139.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++++|||||+|+||++++++|+++|++|++++|+....           ..+.+|+.+.  .       .+.+.++|+||
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------~~v~~d~~~~--~-------~~~l~~~D~Vi  206 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------GKRFWDPLNP--A-------SDLLDGADVLV  206 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------TCEECCTTSC--C-------TTTTTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------cceeecccch--h-------HHhcCCCCEEE
Confidence            56999999999999999999999999999999987653           2267787642  1       22335899999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC--------
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--------  155 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~--------  155 (254)
                      |+|+......         ...+.....+++|+.++.++++++..   +..      .+++|++||...+.+        
T Consensus       207 h~A~~~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~------~~r~V~~SS~~vyg~~~~~~~~~  268 (516)
T 3oh8_A          207 HLAGEPIFGR---------FNDSHKEAIRESRVLPTKFLAELVAE---STQ------CTTMISASAVGFYGHDRGDEILT  268 (516)
T ss_dssp             ECCCC--------------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSS------CCEEEEEEEGGGGCSEEEEEEEC
T ss_pred             ECCCCccccc---------cchhHHHHHHHHHHHHHHHHHHHHHh---cCC------CCEEEEeCcceEecCCCCCCccC
Confidence            9999753221         34566788899999999999886432   222      468999999775541        


Q ss_pred             ---CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcC-CCC------CCCCCHH
Q psy12833        156 ---QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSI-PAP------QRLGHPD  225 (254)
Q Consensus       156 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~  225 (254)
                         ..+...|+.+|...+.+.+.    ....|++++.++||.+.++... ....+...+.... ...      ..+++++
T Consensus       269 E~~~~~~~~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~-~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~  343 (516)
T 3oh8_A          269 EESESGDDFLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGG-MLPLLKTLFSTGLGGKFGDGTSWFSWIAID  343 (516)
T ss_dssp             TTSCCCSSHHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBS-HHHHHHHTTC---CCCCTTSCCEECEEEHH
T ss_pred             CCCCCCcChHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCC-hHHHHHHHHHhCCCcccCCCCceEceEeHH
Confidence               11345677778777665433    3457899999999999887532 1222221111111 100      2457899


Q ss_pred             HHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        226 EFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       226 ~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      |+|++++.++..+...| .+++-+|.
T Consensus       344 Dva~ai~~~l~~~~~~g-~~ni~~~~  368 (516)
T 3oh8_A          344 DLTDIYYRAIVDAQISG-PINAVAPN  368 (516)
T ss_dssp             HHHHHHHHHHHCTTCCE-EEEESCSC
T ss_pred             HHHHHHHHHHhCcccCC-cEEEECCC
Confidence            99999999998665555 56766554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.74  E-value=7.7e-18  Score=140.32  Aligned_cols=202  Identities=13%  Similarity=0.099  Sum_probs=131.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-----hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-----GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |.+.++++||||||+||++++++|+++|++|++++|+...     .+.+......++.++.+|++|++++.++++     
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-----   75 (313)
T 1qyd_A            1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-----   75 (313)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-----
Confidence            4335789999999999999999999999999999998532     222211124678999999999999888876     


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-  154 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-  154 (254)
                        ++|++||+++.....                     .|+.+..++++++.    +...     -+++|+  |..+.. 
T Consensus        76 --~~d~vi~~a~~~~~~---------------------~~~~~~~~l~~aa~----~~g~-----v~~~v~--S~~g~~~  121 (313)
T 1qyd_A           76 --QVDVVISALAGGVLS---------------------HHILEQLKLVEAIK----EAGN-----IKRFLP--SEFGMDP  121 (313)
T ss_dssp             --TCSEEEECCCCSSSS---------------------TTTTTHHHHHHHHH----HSCC-----CSEEEC--SCCSSCT
T ss_pred             --CCCEEEECCccccch---------------------hhHHHHHHHHHHHH----hcCC-----CceEEe--cCCcCCc
Confidence              689999999864311                     14445555554443    3210     246764  333321 


Q ss_pred             -----C-CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHH--HHHHHhcCCC------CCC
Q psy12833        155 -----G-QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV--RNFLARSIPA------PQR  220 (254)
Q Consensus       155 -----~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~--~~~~~~~~~~------~~~  220 (254)
                           + .|....| .+|.+++.+.+       ..|++++.++||++.+++........  .....+..+.      ...
T Consensus       122 ~~~~~~~~p~~~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  193 (313)
T 1qyd_A          122 DIMEHALQPGSITF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGI  193 (313)
T ss_dssp             TSCCCCCSSTTHHH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEE
T ss_pred             cccccCCCCCcchH-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEE
Confidence                 1 1335578 99999887765       24788999999988665432111000  0000001110      024


Q ss_pred             CCCHHHHHHHHHHHhcCCCcccceEEecC
Q psy12833        221 LGHPDEFAQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       221 ~~~~~~va~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      +++++|+|+.+..++..+...|+.+.+.|
T Consensus       194 ~i~~~Dva~~~~~~l~~~~~~~~~~~~~g  222 (313)
T 1qyd_A          194 WVDEDDVGTYTIKSIDDPQTLNKTMYIRP  222 (313)
T ss_dssp             EECHHHHHHHHHHHTTCGGGSSSEEECCC
T ss_pred             EEEHHHHHHHHHHHHhCcccCCceEEEeC
Confidence            56899999999999986544578888765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.72  E-value=3.9e-18  Score=142.71  Aligned_cols=194  Identities=11%  Similarity=0.079  Sum_probs=126.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-c-----hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-S-----EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~-----~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++++||||+|+||++++++|+++|++|++++|+. .     ..+.+......++.++.+|++|++++.++++       +
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-------~   77 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-------Q   77 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-------C
Confidence            5799999999999999999999999999999986 2     2222211113568999999999999888876       6


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC---
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG---  155 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~---  155 (254)
                      +|+||||++...                         +.+..+++++    +.+...     -++||  .|..+...   
T Consensus        78 ~d~vi~~a~~~~-------------------------~~~~~~l~~a----a~~~g~-----v~~~v--~S~~g~~~~~~  121 (321)
T 3c1o_A           78 VDIVISALPFPM-------------------------ISSQIHIINA----IKAAGN-----IKRFL--PSDFGCEEDRI  121 (321)
T ss_dssp             CSEEEECCCGGG-------------------------SGGGHHHHHH----HHHHCC-----CCEEE--CSCCSSCGGGC
T ss_pred             CCEEEECCCccc-------------------------hhhHHHHHHH----HHHhCC-----ccEEe--ccccccCcccc
Confidence            899999998531                         2223333333    333210     14666  34433211   


Q ss_pred             C---CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHH-hcC---C---CCCCCCCHH
Q psy12833        156 Q---SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLA-RSI---P---APQRLGHPD  225 (254)
Q Consensus       156 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~~~---~---~~~~~~~~~  225 (254)
                      .   |....| .+|.+++.+.+.       .+++++.++||++..+.............. +..   .   ....+++++
T Consensus       122 ~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (321)
T 3c1o_A          122 KPLPPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEE  193 (321)
T ss_dssp             CCCHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHH
T ss_pred             ccCCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHH
Confidence            1   124578 999999888753       368888899998866532110000000000 000   0   013467999


Q ss_pred             HHHHHHHHHhcCCCcccceEEecC
Q psy12833        226 EFAQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       226 ~va~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      |+|+.+..++.++...|+.+.+.|
T Consensus       194 Dva~~~~~~l~~~~~~g~~~~~~g  217 (321)
T 3c1o_A          194 DIAKYTIKVACDPRCCNRIVIYRP  217 (321)
T ss_dssp             HHHHHHHHHHHCGGGTTEEEECCC
T ss_pred             HHHHHHHHHHhCccccCeEEEEeC
Confidence            999999999987655688888876

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.68  E-value=3.7e-17  Score=135.84  Aligned_cols=199  Identities=11%  Similarity=0.119  Sum_probs=126.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh-----HHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-----ESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~-----~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      |.+.++++||||||+||++++++|+++|++|+++.|+....     .+..+++ ..++.++++|++|++++.++++    
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~----   76 (308)
T 1qyc_A            1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK----   76 (308)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH----
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc----
Confidence            33357899999999999999999999999999999985432     1111222 4678999999999999988887    


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                         ++|++||+++...                         +.+...+++++    .+...     -+++|+ |+.....
T Consensus        77 ---~~d~vi~~a~~~~-------------------------~~~~~~l~~aa----~~~g~-----v~~~v~-S~~g~~~  118 (308)
T 1qyc_A           77 ---NVDVVISTVGSLQ-------------------------IESQVNIIKAI----KEVGT-----VKRFFP-SEFGNDV  118 (308)
T ss_dssp             ---TCSEEEECCCGGG-------------------------SGGGHHHHHHH----HHHCC-----CSEEEC-SCCSSCT
T ss_pred             ---CCCEEEECCcchh-------------------------hhhHHHHHHHH----HhcCC-----CceEee-cccccCc
Confidence               6899999998521                         12223333333    33210     246663 4332121


Q ss_pred             ----C-CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHH-HHhcC------CCCCCCC
Q psy12833        155 ----G-QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNF-LARSI------PAPQRLG  222 (254)
Q Consensus       155 ----~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~-~~~~~------~~~~~~~  222 (254)
                          + .|....| .+|.+++.+.+.       .+++++.++||++.+++........... ..+..      .....++
T Consensus       119 ~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (308)
T 1qyc_A          119 DNVHAVEPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFV  190 (308)
T ss_dssp             TSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEE
T ss_pred             cccccCCcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEe
Confidence                1 1224568 999988877753       3688889999988665432111000000 00000      0013456


Q ss_pred             CHHHHHHHHHHHhcCCCcccceEEecC
Q psy12833        223 HPDEFAQLVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       223 ~~~~va~~~~~l~~~~~~~G~~i~~~g  249 (254)
                      +++|+|+.+..++.++...|+.+.+.|
T Consensus       191 ~~~Dva~~~~~~l~~~~~~~~~~~~~g  217 (308)
T 1qyc_A          191 KEEDIGTFTIKAVDDPRTLNKTLYLRL  217 (308)
T ss_dssp             CHHHHHHHHHTTSSCGGGTTEEEECCC
T ss_pred             cHHHHHHHHHHHHhCccccCeEEEEeC
Confidence            899999999999976555577888765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.65  E-value=1.1e-16  Score=133.77  Aligned_cols=190  Identities=14%  Similarity=0.141  Sum_probs=123.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++++||||+|+||++++++|+++|++|++++|+.+...+..+++ ..++.++++|++|++++.++++       ++|+||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-------KVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            57999999999999999999999999999999875222222222 3568899999999999888886       689999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC---C---C
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG---Q---S  157 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~---~---~  157 (254)
                      |+++...                         +.+..++++    .+.+...     -+++|+  |..+...   .   |
T Consensus        85 ~~a~~~~-------------------------~~~~~~l~~----aa~~~g~-----v~~~v~--S~~g~~~~~~~~~~p  128 (318)
T 2r6j_A           85 SALAFPQ-------------------------ILDQFKILE----AIKVAGN-----IKRFLP--SDFGVEEDRINALPP  128 (318)
T ss_dssp             ECCCGGG-------------------------STTHHHHHH----HHHHHCC-----CCEEEC--SCCSSCTTTCCCCHH
T ss_pred             ECCchhh-------------------------hHHHHHHHH----HHHhcCC-----CCEEEe--eccccCcccccCCCC
Confidence            9998521                         112233333    3333210     246663  3333211   1   1


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHH-H-hcC---C---CCCCCCCHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL-A-RSI---P---APQRLGHPDEFAQ  229 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~-~-~~~---~---~~~~~~~~~~va~  229 (254)
                      ....| .+|.+++.+.+.       .+++++.++||++..+....    ..... . +..   .   ....+++++|+|+
T Consensus       129 ~~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  196 (318)
T 2r6j_A          129 FEALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINY----LLRPYDPKDEITVYGTGEAKFAMNYEQDIGL  196 (318)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHH----HHCTTCCCSEEEEETTSCCEEEEECHHHHHH
T ss_pred             cchhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhh----hccccCCCCceEEecCCCceeeEeeHHHHHH
Confidence            13468 899988877653       47888999999886543211    10000 0 000   0   0134568999999


Q ss_pred             HHHHHhcCCCcccceEEecC
Q psy12833        230 LVQSIITNPLINGEVIRIDG  249 (254)
Q Consensus       230 ~~~~l~~~~~~~G~~i~~~g  249 (254)
                      .+..++.++...|+.+.+.|
T Consensus       197 ~~~~~l~~~~~~~~~~~~~g  216 (318)
T 2r6j_A          197 YTIKVATDPRALNRVVIYRP  216 (318)
T ss_dssp             HHHHHTTCGGGTTEEEECCC
T ss_pred             HHHHHhcCccccCeEEEecC
Confidence            99999976544577777764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.62  E-value=2.9e-14  Score=117.96  Aligned_cols=202  Identities=16%  Similarity=0.102  Sum_probs=126.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||||.||++++++|.++|++|+++.|++...         .   +..|     .+      ..+....+|.+||+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------~---~~~~-----~~------~~~~l~~~d~vihl   58 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------R---ITWD-----EL------AASGLPSCDAAVNL   58 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------E---EEHH-----HH------HHHCCCSCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------e---eecc-----hh------hHhhccCCCEEEEe
Confidence            599999999999999999999999999999975431         1   1111     11      11234579999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC--------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS--------  157 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~--------  157 (254)
                      |+.........      .+....+..++.|+.++..+.++....-.+        ..++++.||...+.+..        
T Consensus        59 a~~~i~~~~~~------~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~--------~~~~i~~Ss~~vyg~~~~~~~~E~~  124 (298)
T 4b4o_A           59 AGENILNPLRR------WNETFQKEVLGSRLETTQLLAKAITKAPQP--------PKAWVLVTGVAYYQPSLTAEYDEDS  124 (298)
T ss_dssp             CCCCSSCTTSC------CCHHHHHHHHHHHHHHHHHHHHHHHHCSSC--------CSEEEEEEEGGGSCCCSSCCBCTTC
T ss_pred             ccCcccchhhh------hhhhhhhhhhhHHHHHHHHHHHHHHHhCCC--------ceEEEEEeeeeeecCCCCCcccccC
Confidence            98543322222      356667778888888877776554432111        35678888876554321        


Q ss_pred             ---CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcC-C------CCCCCCCHHHH
Q psy12833        158 ---GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSI-P------APQRLGHPDEF  227 (254)
Q Consensus       158 ---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~v  227 (254)
                         +...|+..|...+.     +......++++..+.|+.+..+...... .......... .      ....+++++|+
T Consensus       125 p~~~~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~g~g~~~~~~ihv~Dv  198 (298)
T 4b4o_A          125 PGGDFDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAMG-HMLLPFRLGLGGPIGSGHQFFPWIHIGDL  198 (298)
T ss_dssp             CCSCSSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHHH-HHHHHHHTTCCCCBTTSCSBCCEEEHHHH
T ss_pred             CccccchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCchh-HHHHHHhcCCcceecccCceeecCcHHHH
Confidence               22233333333221     2234567899999999999876432221 1111111111 1      11335689999


Q ss_pred             HHHHHHHhcCCCcccceEEecCCc
Q psy12833        228 AQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       228 a~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      ++++..++.++...| .+++-++.
T Consensus       199 a~a~~~~~~~~~~~g-~yn~~~~~  221 (298)
T 4b4o_A          199 AGILTHALEANHVHG-VLNGVAPS  221 (298)
T ss_dssp             HHHHHHHHHCTTCCE-EEEESCSC
T ss_pred             HHHHHHHHhCCCCCC-eEEEECCC
Confidence            999999998776666 78876654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.37  E-value=9.2e-13  Score=108.52  Aligned_cols=81  Identities=20%  Similarity=0.334  Sum_probs=69.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++||+++||||+||+|++++..|+++|++|++++|+.++++++.+++.  .++.++.+|++|+++++++++       .+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~  189 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------GA  189 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------TC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------hC
Confidence            578999999999999999999999999999999999888877776552  256788999999998877766       57


Q ss_pred             cEEEeCCccC
Q psy12833         80 DVNVNCAGIS   89 (254)
Q Consensus        80 d~li~~ag~~   89 (254)
                      |++|||+|..
T Consensus       190 DvlVn~ag~g  199 (287)
T 1lu9_A          190 HFVFTAGAIG  199 (287)
T ss_dssp             SEEEECCCTT
T ss_pred             CEEEECCCcc
Confidence            9999999864

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.28  E-value=6.6e-12  Score=105.27  Aligned_cols=153  Identities=18%  Similarity=0.123  Sum_probs=102.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCCCc--hhHHHHHHhC-CCceEEecCCCCHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGG-------RVVLCDLPTS--EGESVAKELG-PDVKFAPVDVTSEEDVQKAVL   70 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~   70 (254)
                      |.+..+++||||+|.||.+++..|+++|+       +|++.++...  ..+....++. ..+.++ .|+.+.+++.+.++
T Consensus         1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhC
Confidence            44456899999999999999999999986       8999988642  2222222221 122233 46655444444443


Q ss_pred             HHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         71 LCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        71 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                             +.|++||+||.....   .      .+   ..+.++.|+.+...+++++...-  ..      ..+++++|+.
T Consensus        80 -------~~D~Vih~Ag~~~~~---~------~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~------~~~vvv~snp  132 (327)
T 1y7t_A           80 -------DADYALLVGAAPRKA---G------ME---RRDLLQVNGKIFTEQGRALAEVA--KK------DVKVLVVGNP  132 (327)
T ss_dssp             -------TCSEEEECCCCCCCT---T------CC---HHHHHHHHHHHHHHHHHHHHHHS--CT------TCEEEECSSS
T ss_pred             -------CCCEEEECCCcCCCC---C------CC---HHHHHHHHHHHHHHHHHHHHhhc--CC------CeEEEEeCCc
Confidence                   689999999975321   1      22   34578999999999888776642  11      3578888775


Q ss_pred             cc--------cc-CCCCCccchhchHHHHHhHHHHHHHhc
Q psy12833        151 AA--------YE-GQSGQVAYSASKSGIVGMTLPMARDLA  181 (254)
Q Consensus       151 ~~--------~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~  181 (254)
                      ..        .. +.++...|+.+|...+.+.+.+++.+.
T Consensus       133 ~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          133 ANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             HHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             hhhhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence            41        11 244556799999999999888887763

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.24  E-value=3.6e-11  Score=94.55  Aligned_cols=81  Identities=23%  Similarity=0.274  Sum_probs=62.4

Q ss_pred             CCCcEEEEeCC----------------CChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGG----------------ASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGa----------------s~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~   65 (254)
                      |+||++|||||                |||||+++|++|+++|++|++++++.. ++     ....  .-.+|+++.+  
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~~~g--~~~~dv~~~~--   75 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----TPPF--VKRVDVMTAL--   75 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----CCTT--EEEEECCSHH--
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----cCCC--CeEEccCcHH--
Confidence            68999999999                689999999999999999999988652 11     0111  2356777754  


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCcc
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAFK   93 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~   93 (254)
                       ++++.+.+.++++|++|||||+....+
T Consensus        76 -~~~~~v~~~~~~~Dili~~Aav~d~~p  102 (226)
T 1u7z_A           76 -EMEAAVNASVQQQNIFIGCAAVADYRA  102 (226)
T ss_dssp             -HHHHHHHHHGGGCSEEEECCBCCSEEE
T ss_pred             -HHHHHHHHhcCCCCEEEECCcccCCCC
Confidence             466677778889999999999875443

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.10  E-value=6.8e-11  Score=93.18  Aligned_cols=83  Identities=19%  Similarity=0.286  Sum_probs=61.4

Q ss_pred             CCcEEEEeCC----------------CChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHH
Q psy12833          3 KGVVGLVTGG----------------ASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         3 ~~~~~lItGa----------------s~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~   66 (254)
                      +||++|||||                ||++|.++|++|+++|++|++++|+.....    .....+..+  |+.   +.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----~~~~~~~~~--~v~---s~~   72 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----EPHPNLSIR--EIT---NTK   72 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----CCCTTEEEE--ECC---SHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCCCeEEE--EHh---HHH
Confidence            6899999999                788999999999999999999999754211    001123333  333   566


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCCCccc
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISCAFKI   94 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~~~~~   94 (254)
                      ++++.+.+.+++.|++|+||++....+.
T Consensus        73 em~~~v~~~~~~~Dili~aAAvsD~~p~  100 (232)
T 2gk4_A           73 DLLIEMQERVQDYQVLIHSMAVSDYTPV  100 (232)
T ss_dssp             HHHHHHHHHGGGCSEEEECSBCCSEEEE
T ss_pred             HHHHHHHHhcCCCCEEEEcCccccccch
Confidence            6777777778899999999998755443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.07  E-value=6.9e-10  Score=78.41  Aligned_cols=73  Identities=18%  Similarity=0.136  Sum_probs=63.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +++++|+|+ |++|+++++.|.++| ++|++++|++++.+...   ...+.++.+|+++.+++.++++       ++|++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   73 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---RMGVATKQVDAKDEAGLAKALG-------GFDAV   73 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---TTTCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---hCCCcEEEecCCCHHHHHHHHc-------CCCEE
Confidence            578999999 999999999999999 89999999887776654   3567889999999988777764       78999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |++++
T Consensus        74 i~~~~   78 (118)
T 3ic5_A           74 ISAAP   78 (118)
T ss_dssp             EECSC
T ss_pred             EECCC
Confidence            99986

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.95  E-value=1.2e-09  Score=81.73  Aligned_cols=75  Identities=25%  Similarity=0.317  Sum_probs=63.1

Q ss_pred             ChHHHHHHHHHHHcCCEEEEeeCCCchh------HHHHHHhCCCceEEecCCCCH--HHHHHHHHHHHHHcCCCcEEEeC
Q psy12833         14 SGLGKATVERIVREGGRVVLCDLPTSEG------ESVAKELGPDVKFAPVDVTSE--EDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus        14 ~giG~a~a~~l~~~g~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~Dls~~--~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +-++.++++.|++.|++|+++.|+....      .+..++.+.++..+++|++++  ++++++++.+.+.+|+ |++|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            4577999999999999999998865543      334445577788899999999  9999999999998899 999999


Q ss_pred             CccC
Q psy12833         86 AGIS   89 (254)
Q Consensus        86 ag~~   89 (254)
                      +|..
T Consensus       105 Agg~  108 (157)
T 3gxh_A          105 LANY  108 (157)
T ss_dssp             SBSH
T ss_pred             CCCC
Confidence            9963

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.91  E-value=4.2e-09  Score=90.67  Aligned_cols=79  Identities=18%  Similarity=0.244  Sum_probs=69.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC---CEEEEeeCCCchhHHHHHHhC----CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          5 VVGLVTGGASGLGKATVERIVREG---GRVVLCDLPTSEGESVAKELG----PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g---~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++++|+|| |++|+++++.|+++|   ..|++++|+.++++++.+++.    .++.++.+|++|.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47999999 899999999999998   489999999999988887763    36889999999999999999876     


Q ss_pred             CCcEEEeCCccC
Q psy12833         78 KLDVNVNCAGIS   89 (254)
Q Consensus        78 ~id~li~~ag~~   89 (254)
                      ++|+||||++..
T Consensus        76 ~~DvVin~ag~~   87 (405)
T 4ina_A           76 KPQIVLNIALPY   87 (405)
T ss_dssp             CCSEEEECSCGG
T ss_pred             CCCEEEECCCcc
Confidence            799999999853

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.86  E-value=4.8e-09  Score=91.41  Aligned_cols=79  Identities=13%  Similarity=0.180  Sum_probs=64.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++++++|+| +|++|++++..|++.|++|++++|+.++++++.++++ ++.++.+|++|.+++.++++       ++|+
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~-~~~~~~~Dv~d~~~l~~~l~-------~~Dv   71 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-HSTPISLDVNDDAALDAEVA-------KHDL   71 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT-TEEEEECCTTCHHHHHHHHT-------TSSE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHc-------CCcE
Confidence            4678999998 7999999999999999999999998777666544432 36688999999988887764       7999


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      ||||++..
T Consensus        72 VIn~a~~~   79 (450)
T 1ff9_A           72 VISLIPYT   79 (450)
T ss_dssp             EEECCC--
T ss_pred             EEECCccc
Confidence            99999864

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.84  E-value=1.3e-11  Score=106.99  Aligned_cols=45  Identities=22%  Similarity=0.409  Sum_probs=39.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK   46 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~   46 (254)
                      ++.||+++|||++ +||+++++.|+..|++|+++++++...++...
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            4789999999997 99999999999999999999998766555443

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.77  E-value=9.6e-09  Score=86.12  Aligned_cols=79  Identities=19%  Similarity=0.220  Sum_probs=61.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++|||||++|||.++++.+...|++|++++|+.++++.. ++++..   ..+|.++.+++.+.+.+...  +++|++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~~--~~~d~v  218 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFD---AAFNYKTVNSLEEALKKASP--DGYDCY  218 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS---EEEETTSCSCHHHHHHHHCT--TCEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCc---EEEecCCHHHHHHHHHHHhC--CCCeEE
Confidence            579999999999999999999999999999999988777766 555532   23577663445555554433  579999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+|+|
T Consensus       219 i~~~g  223 (333)
T 1v3u_A          219 FDNVG  223 (333)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.75  E-value=1.2e-08  Score=79.00  Aligned_cols=79  Identities=22%  Similarity=0.191  Sum_probs=57.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|++++||||++|||.++++.+...|++|++++|+.++.+.. .+++..   ..+|.++.+..+.+.+...  .+++|++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~--~~~~D~v  111 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLGVE---YVGDSRSVDFADEILELTD--GYGVDVV  111 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTCCS---EEEETTCSTHHHHHHHHTT--TCCEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---EEeeCCcHHHHHHHHHHhC--CCCCeEE
Confidence            578999999999999999999999999999999987766554 334432   2347766554443333221  1369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+|+|
T Consensus       112 i~~~g  116 (198)
T 1pqw_A          112 LNSLA  116 (198)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.73  E-value=3.4e-08  Score=86.31  Aligned_cols=78  Identities=17%  Similarity=0.213  Sum_probs=65.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++++++|+|+ |++|++++..|++. |++|++++|+.++++++.++  .++.++.+|++|.+++.++++       ++|
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~-------~~D   90 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP--SGSKAISLDVTDDSALDKVLA-------DND   90 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG--GTCEEEECCTTCHHHHHHHHH-------TSS
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh--cCCcEEEEecCCHHHHHHHHc-------CCC
Confidence            35689999998 99999999999998 78999999998888777655  346778899999988877765       689


Q ss_pred             EEEeCCccC
Q psy12833         81 VNVNCAGIS   89 (254)
Q Consensus        81 ~li~~ag~~   89 (254)
                      +||||++..
T Consensus        91 vVIn~tp~~   99 (467)
T 2axq_A           91 VVISLIPYT   99 (467)
T ss_dssp             EEEECSCGG
T ss_pred             EEEECCchh
Confidence            999999864

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.64  E-value=4.9e-09  Score=86.15  Aligned_cols=77  Identities=16%  Similarity=0.273  Sum_probs=58.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCC---ceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD---VKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++|||++ |+|++++..|+++| +|++++|+.++++++.++++..   ...+.+|+++.          .+.+++
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~~  193 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLDG  193 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCTT
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhCC
Confidence            468999999997 99999999999999 9999999988887777665221   01123455441          344578


Q ss_pred             CcEEEeCCccCC
Q psy12833         79 LDVNVNCAGISC   90 (254)
Q Consensus        79 id~li~~ag~~~   90 (254)
                      +|++|||++...
T Consensus       194 ~DilVn~ag~~~  205 (287)
T 1nvt_A          194 VDIIINATPIGM  205 (287)
T ss_dssp             CCEEEECSCTTC
T ss_pred             CCEEEECCCCCC
Confidence            999999999753

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.64  E-value=3.8e-09  Score=93.87  Aligned_cols=103  Identities=16%  Similarity=0.165  Sum_probs=64.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|+++|||| ||+|++++.+|+++|++|++++|+.++++++.++++.++.  .  +.|   +.++      ....+|+
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~--~--~~d---l~~~------~~~~~Di  427 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKAL--S--LTD---LDNY------HPEDGMV  427 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CE--E--TTT---TTTC--------CCSEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCcee--e--HHH---hhhc------cccCceE
Confidence            35789999999 5999999999999999999999999988888887754332  2  212   1000      1135899


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHH
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT  119 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  119 (254)
                      +|||+|....... +..+..+...+.+...+++|+.+.
T Consensus       428 lVN~agvg~~~~~-~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          428 LANTTSMGMQPNV-EETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             EEECSSTTCTTCT-TCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             EEECCCCCCCCCC-CCCCCChHHcCcCcEEEEEeeCCc
Confidence            9999997532110 001111234555666667776554

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.62  E-value=1.8e-07  Score=77.38  Aligned_cols=80  Identities=16%  Similarity=0.290  Sum_probs=61.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCC---CchhHHHHHHhCC--CceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLP---TSEGESVAKELGP--DVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++.++++.  .+.....++.+.+++.+.+.     
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-----  225 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-----  225 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----
Confidence            47899999998 7999999999999999 89999999   7777777766522  23344556777666655544     


Q ss_pred             cCCCcEEEeCCccC
Q psy12833         76 FGKLDVNVNCAGIS   89 (254)
Q Consensus        76 ~~~id~li~~ag~~   89 (254)
                        ..|+|||+....
T Consensus       226 --~aDiIINaTp~G  237 (315)
T 3tnl_A          226 --ESVIFTNATGVG  237 (315)
T ss_dssp             --TCSEEEECSSTT
T ss_pred             --CCCEEEECccCC
Confidence              689999987653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.62  E-value=8.6e-08  Score=80.77  Aligned_cols=79  Identities=28%  Similarity=0.320  Sum_probs=61.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+|+++++|.++++.+...|++|++++|+.++.+.. ++++..   ..+|.++.+++.+.+.++...  ++|++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~~~--~~D~v  242 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIGGE---VFIDFTKEKDIVGAVLKATDG--GAHGV  242 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHTTCC---EEEETTTCSCHHHHHHHHHTS--CEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHcCCc---eEEecCccHhHHHHHHHHhCC--CCCEE
Confidence            578999999999999999999999999999999988877544 455432   234777555566666655443  79999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+|+|
T Consensus       243 i~~~g  247 (347)
T 2hcy_A          243 INVSV  247 (347)
T ss_dssp             EECSS
T ss_pred             EECCC
Confidence            99987

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.58  E-value=5.5e-08  Score=81.84  Aligned_cols=80  Identities=18%  Similarity=0.218  Sum_probs=60.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+||+|++|.++++.+...|++|++++|+.++++.+.++++...   .+|.++.+++.+.+.++..  +++|++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~--~~~d~v  229 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD---AFNYKEESDLTAALKRCFP--NGIDIY  229 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE---EEETTSCSCSHHHHHHHCT--TCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce---EEecCCHHHHHHHHHHHhC--CCCcEE
Confidence            57899999999999999999999999999999998887776655565432   2365554344444444332  479999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+|+|
T Consensus       230 i~~~g  234 (345)
T 2j3h_A          230 FENVG  234 (345)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.57  E-value=2.4e-07  Score=67.50  Aligned_cols=75  Identities=15%  Similarity=0.134  Sum_probs=60.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +.++++|+|+ |.+|+++++.|.++|++|++++++++..+.+.+   ..+.++.+|.+|++.++++      ...+.|++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~---~~~~~~~gd~~~~~~l~~~------~~~~~d~v   74 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED---EGFDAVIADPTDESFYRSL------DLEGVSAV   74 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEECCTTCHHHHHHS------CCTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---CCCcEEECCCCCHHHHHhC------CcccCCEE
Confidence            3468999998 779999999999999999999999887776654   2477889999999876654      22478999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.+.+
T Consensus        75 i~~~~   79 (141)
T 3llv_A           75 LITGS   79 (141)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            98765

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.57  E-value=1.1e-07  Score=77.31  Aligned_cols=76  Identities=14%  Similarity=0.258  Sum_probs=57.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++.......+|+   +++       .+  ++.|+
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~-------~~--~~~Di  183 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DEL-------EG--HEFDL  183 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGG-------TT--CCCSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHh-------cc--CCCCE
Confidence            46899999999 7999999999999999999999999888888877643111222333   211       11  58999


Q ss_pred             EEeCCccCC
Q psy12833         82 NVNCAGISC   90 (254)
Q Consensus        82 li~~ag~~~   90 (254)
                      +|+|++...
T Consensus       184 vVn~t~~~~  192 (271)
T 1nyt_A          184 IINATSSGI  192 (271)
T ss_dssp             EEECCSCGG
T ss_pred             EEECCCCCC
Confidence            999998643

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.53  E-value=2.8e-07  Score=78.32  Aligned_cols=77  Identities=14%  Similarity=0.248  Sum_probs=62.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++++++|+|+ |++|+++++.+...|++|++++|+.++++...+.++..   +.+|.++.+++.+++.       +.|+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~-------~~Dv  232 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQ-------HADL  232 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHH-------HCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHh-------CCCE
Confidence            46899999999 99999999999999999999999988877766555543   4567788887777664       5899


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|+|++..
T Consensus       233 Vi~~~g~~  240 (369)
T 2eez_A          233 LIGAVLVP  240 (369)
T ss_dssp             EEECCC--
T ss_pred             EEECCCCC
Confidence            99999853

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.53  E-value=1.1e-07  Score=79.38  Aligned_cols=79  Identities=15%  Similarity=0.130  Sum_probs=58.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++|||||++|||.++++.+...|++|++++|++++.+.+. +++..   ..+|.++.+..+++.+...  ..++|++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~D~v  213 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAW---QVINYREEDLVERLKEITG--GKKVRVV  213 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCS---EEEETTTSCHHHHHHHHTT--TCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCC---EEEECCCccHHHHHHHHhC--CCCceEE
Confidence            5789999999999999999999999999999999877766554 35433   2246666544444333221  1369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+|+|
T Consensus       214 i~~~g  218 (327)
T 1qor_A          214 YDSVG  218 (327)
T ss_dssp             EECSC
T ss_pred             EECCc
Confidence            99998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.53  E-value=1.5e-07  Score=78.84  Aligned_cols=80  Identities=18%  Similarity=0.202  Sum_probs=58.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+||++|||.++++.+...|++|++++|+.++++.+. +++..   ..+|.++.+..+++.+...  ..++|++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~---~~~d~~~~~~~~~i~~~~~--~~~~d~v  218 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCH---HTINYSTQDFAEVVREITG--GKGVDVV  218 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCS---EEEETTTSCHHHHHHHHHT--TCCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCC---EEEECCCHHHHHHHHHHhC--CCCCeEE
Confidence            5789999999999999999999999999999999877766553 45433   2246665444433333221  1369999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |+|+|.
T Consensus       219 i~~~g~  224 (333)
T 1wly_A          219 YDSIGK  224 (333)
T ss_dssp             EECSCT
T ss_pred             EECCcH
Confidence            999983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.51  E-value=1.4e-07  Score=79.78  Aligned_cols=77  Identities=21%  Similarity=0.147  Sum_probs=57.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +++||+||++|||.++++.+...|+ +|++++++.++.+.+.++++..   ..+|.++.+. .+.+.+...  +++|++|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~---~~~d~~~~~~-~~~~~~~~~--~~~d~vi  235 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD---AAINYKKDNV-AEQLRESCP--AGVDVYF  235 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS---EEEETTTSCH-HHHHHHHCT--TCEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc---eEEecCchHH-HHHHHHhcC--CCCCEEE
Confidence            8999999999999999999999999 9999999887777766556543   2346655332 222222221  2699999


Q ss_pred             eCCc
Q psy12833         84 NCAG   87 (254)
Q Consensus        84 ~~ag   87 (254)
                      +|+|
T Consensus       236 ~~~G  239 (357)
T 2zb4_A          236 DNVG  239 (357)
T ss_dssp             ESCC
T ss_pred             ECCC
Confidence            9998

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.50  E-value=1.2e-07  Score=69.04  Aligned_cols=76  Identities=17%  Similarity=0.216  Sum_probs=57.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++++++|+|+ |++|+.+++.|.+.|++|++++|+.+..+.+.+   ....++.+|.++++.+.++      ...+.|+
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~------~~~~~d~   73 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSL------GIRNFEY   73 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT---TCSEEEECCTTCHHHHHTT------TGGGCSE
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hCCEEEEeCCCCHHHHHhc------CCCCCCE
Confidence            35678999998 999999999999999999999998765544322   2346778899987655443      1247899


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|++++
T Consensus        74 vi~~~~   79 (144)
T 2hmt_A           74 VIVAIG   79 (144)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999876

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.49  E-value=1.9e-07  Score=78.83  Aligned_cols=80  Identities=19%  Similarity=0.275  Sum_probs=58.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+||++|||.++++.+...|++|++++|++++++.+ ++++..   ..+|.++.+..+++.+...  ..++|++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  235 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAA---AGFNYKKEDFSEATLKFTK--GAGVNLI  235 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCS---EEEETTTSCHHHHHHHHTT--TSCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc---EEEecCChHHHHHHHHHhc--CCCceEE
Confidence            578999999999999999999999999999999988777665 555543   2345555443333322111  1369999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |+|+|.
T Consensus       236 i~~~G~  241 (354)
T 2j8z_A          236 LDCIGG  241 (354)
T ss_dssp             EESSCG
T ss_pred             EECCCc
Confidence            999983

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.49  E-value=2e-07  Score=78.08  Aligned_cols=79  Identities=22%  Similarity=0.189  Sum_probs=58.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|+++||+||+|+||.++++.+...|++|++++|++++.+.+.++++...   ..|..+.+..+.+.+ ..  .+++|++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~-~~--~~~~d~v  222 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG---AIDYKNEDLAAGLKR-EC--PKGIDVF  222 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE---EEETTTSCHHHHHHH-HC--TTCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE---EEECCCHHHHHHHHH-hc--CCCceEE
Confidence            58999999999999999999999999999999999888877756665432   235555432222222 21  2479999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+|+|
T Consensus       223 i~~~g  227 (336)
T 4b7c_A          223 FDNVG  227 (336)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99988

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.48  E-value=2.7e-07  Score=77.92  Aligned_cols=79  Identities=14%  Similarity=0.122  Sum_probs=57.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+||+||+|.++++.+...|++|++++|++++.+. .++++..   ..+|.++.+..+++.+.. . ..++|++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~ga~---~~~d~~~~~~~~~~~~~~-~-~~~~D~v  243 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQNGAH---EVFNHREVNYIDKIKKYV-G-EKGIDII  243 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCS---EEEETTSTTHHHHHHHHH-C-TTCEEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHcCCC---EEEeCCCchHHHHHHHHc-C-CCCcEEE
Confidence            57899999999999999999999999999999998877664 3555533   234666544333332221 1 1269999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+|+|
T Consensus       244 i~~~G  248 (351)
T 1yb5_A          244 IEMLA  248 (351)
T ss_dssp             EESCH
T ss_pred             EECCC
Confidence            99987

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.46  E-value=9.7e-07  Score=65.28  Aligned_cols=78  Identities=17%  Similarity=0.200  Sum_probs=60.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ..+.++|.|+ |.+|+.+++.|.+.|++|++++++. +..+.+.+.....+.++..|.+|++.++++      ...+.|.
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~   74 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKA------GIDRCRA   74 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHH------TTTTCSE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHc------ChhhCCE
Confidence            4567888886 9999999999999999999999974 555555555555688999999998866554      1237899


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|.+.+
T Consensus        75 vi~~~~   80 (153)
T 1id1_A           75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEecC
Confidence            988754

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.44  E-value=4.2e-07  Score=76.02  Aligned_cols=150  Identities=13%  Similarity=0.033  Sum_probs=94.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCC----CchhHHHHHHhCCC-ceEEecCCCCHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG-------RVVLCDLP----TSEGESVAKELGPD-VKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~-~~~~~~Dls~~~~~~~~~~~   71 (254)
                      ..+++||||+|.+|..++..|+.+|.       +|++.+++    .++++....++... ..+ ..|+....+..+.++ 
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~-   82 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK-   82 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC-
Confidence            45899999999999999999999885       79999987    44344333333221 111 124433333333433 


Q ss_pred             HHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         72 CKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                            ..|++|++||......         .+.   .+.+..|+.....+++.+...-  ..      +.+++++|.-.
T Consensus        83 ------~aD~Vi~~ag~~~~~g---------~~r---~dl~~~N~~i~~~i~~~i~~~~--~p------~a~ii~~SNPv  136 (329)
T 1b8p_A           83 ------DADVALLVGARPRGPG---------MER---KDLLEANAQIFTVQGKAIDAVA--SR------NIKVLVVGNPA  136 (329)
T ss_dssp             ------TCSEEEECCCCCCCTT---------CCH---HHHHHHHHHHHHHHHHHHHHHS--CT------TCEEEECSSSH
T ss_pred             ------CCCEEEEeCCCCCCCC---------CCH---HHHHHHHHHHHHHHHHHHHHhc--CC------CeEEEEccCch
Confidence                  7899999999643211         232   3456778777777766665532  01      46899998744


Q ss_pred             c--------cc-CCCCCccchhchHHHHHhHHHHHHHhc
Q psy12833        152 A--------YE-GQSGQVAYSASKSGIVGMTLPMARDLA  181 (254)
Q Consensus       152 ~--------~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~  181 (254)
                      .        .. ++|....|+.++.--..+...+++.+.
T Consensus       137 ~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          137 NTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            2        12 344545688887666777777887774

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.34  E-value=2e-07  Score=76.19  Aligned_cols=77  Identities=22%  Similarity=0.271  Sum_probs=57.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhC---CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELG---PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.++++   ..+.....++.+.   .+.+.       
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~-------  193 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA-------  193 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH-------
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh-------
Confidence            46899999998 7999999999999999 79999999998888877663   2233344444332   33333       


Q ss_pred             CCcEEEeCCccC
Q psy12833         78 KLDVNVNCAGIS   89 (254)
Q Consensus        78 ~id~li~~ag~~   89 (254)
                      ..|+|||+....
T Consensus       194 ~~DiVInaTp~G  205 (283)
T 3jyo_A          194 AADGVVNATPMG  205 (283)
T ss_dssp             HSSEEEECSSTT
T ss_pred             cCCEEEECCCCC
Confidence            469999987653

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.34  E-value=2e-06  Score=71.02  Aligned_cols=80  Identities=18%  Similarity=0.254  Sum_probs=58.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCC---CchhHHHHHHhCC--CceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLP---TSEGESVAKELGP--DVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +++|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++++++.++++.  .......++.+.+.+.+.+.     
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~-----  219 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA-----  219 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-----
Confidence            46899999998 8999999999999998 89999999   6677777766522  22233445555443333333     


Q ss_pred             cCCCcEEEeCCccC
Q psy12833         76 FGKLDVNVNCAGIS   89 (254)
Q Consensus        76 ~~~id~li~~ag~~   89 (254)
                        ..|+|||+....
T Consensus       220 --~~DiIINaTp~G  231 (312)
T 3t4e_A          220 --SADILTNGTKVG  231 (312)
T ss_dssp             --HCSEEEECSSTT
T ss_pred             --CceEEEECCcCC
Confidence              479999987654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.31  E-value=1.2e-06  Score=73.71  Aligned_cols=80  Identities=19%  Similarity=0.287  Sum_probs=56.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|+++||+|+++++|.++++.+... |++|+++++++++.+.+ ++++...   .+|.++.+..++ +.++... +++|+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~~-~~~~~~~-~~~d~  243 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADY---VINASMQDPLAE-IRRITES-KGVDA  243 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSE---EEETTTSCHHHH-HHHHTTT-SCEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCE---EecCCCccHHHH-HHHHhcC-CCceE
Confidence            5789999999999999999999998 99999999988776655 4555332   235555332222 2222211 47999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|+|+|.
T Consensus       244 vi~~~g~  250 (347)
T 1jvb_A          244 VIDLNNS  250 (347)
T ss_dssp             EEESCCC
T ss_pred             EEECCCC
Confidence            9999983

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.28  E-value=2.2e-06  Score=74.64  Aligned_cols=84  Identities=24%  Similarity=0.357  Sum_probs=62.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEe--cCCC---------CHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAP--VDVT---------SEEDVQKAVLL   71 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~Dls---------~~~~~~~~~~~   71 (254)
                      .|+++||+||+|+||.+.++.+...|++|++++++.++.+.+ ++++....+-.  .|+.         +.++.+++.+.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL  298 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence            578999999999999999998889999999999887776655 55655433322  2221         23455666777


Q ss_pred             HHHHcC-CCcEEEeCCc
Q psy12833         72 CKDSFG-KLDVNVNCAG   87 (254)
Q Consensus        72 ~~~~~~-~id~li~~ag   87 (254)
                      +.+..+ ++|++|+|+|
T Consensus       299 v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          299 VVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHSSCCSEEEECSC
T ss_pred             HHHHhCCCceEEEECCC
Confidence            776554 6999999988

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.28  E-value=1.7e-06  Score=71.30  Aligned_cols=77  Identities=16%  Similarity=0.243  Sum_probs=57.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++++++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.++++....    +..+.+++       .+.....|
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~-------~~~~~~aD  206 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEA-------ETRLAEYD  206 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHH-------HHTGGGCS
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHH-------HhhhccCC
Confidence            46899999998 7999999999999998 999999999998888887654221    11122222       22334789


Q ss_pred             EEEeCCccCC
Q psy12833         81 VNVNCAGISC   90 (254)
Q Consensus        81 ~li~~ag~~~   90 (254)
                      ++|++++...
T Consensus       207 ivIn~t~~~~  216 (297)
T 2egg_A          207 IIINTTSVGM  216 (297)
T ss_dssp             EEEECSCTTC
T ss_pred             EEEECCCCCC
Confidence            9999998643

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.27  E-value=4.5e-06  Score=60.28  Aligned_cols=75  Identities=19%  Similarity=0.317  Sum_probs=58.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +.+++|+|+ |.+|+.+++.|.+.|++|++++|+++..+.+.++.  .+.++..|.++++.+.+.      ...+.|++|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~------~~~~~d~vi   74 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDA------GIEDADMYI   74 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHT------TTTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc--CcEEEEcCCCCHHHHHHc------CcccCCEEE
Confidence            467999987 99999999999999999999999887776665443  456788899887764321      134789999


Q ss_pred             eCCc
Q psy12833         84 NCAG   87 (254)
Q Consensus        84 ~~ag   87 (254)
                      .+.+
T Consensus        75 ~~~~   78 (140)
T 1lss_A           75 AVTG   78 (140)
T ss_dssp             ECCS
T ss_pred             EeeC
Confidence            9864

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.24  E-value=1.8e-06  Score=70.15  Aligned_cols=75  Identities=16%  Similarity=0.252  Sum_probs=55.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++.......+|+   +++.       +  +..|+
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~-------~--~~~Di  183 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIP-------L--QTYDL  183 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCC-------C--SCCSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhc-------c--CCCCE
Confidence            46899999998 7999999999999999999999999988888877643111112232   1110       1  47999


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|++++..
T Consensus       184 vIn~t~~~  191 (272)
T 1p77_A          184 VINATSAG  191 (272)
T ss_dssp             EEECCCC-
T ss_pred             EEECCCCC
Confidence            99999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.22  E-value=2.3e-06  Score=71.81  Aligned_cols=79  Identities=24%  Similarity=0.182  Sum_probs=57.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+|+++++|.++++.+...|++|++++|++++.+.+. +++...   .+|.++.+. .+.+.+... ..++|++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~---~~d~~~~~~-~~~~~~~~~-~~~~d~v  239 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADE---TVNYTHPDW-PKEVRRLTG-GKGADKV  239 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSE---EEETTSTTH-HHHHHHHTT-TTCEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCE---EEcCCcccH-HHHHHHHhC-CCCceEE
Confidence            5789999999999999999999999999999999887776654 455332   246665432 222222211 1379999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+|+|
T Consensus       240 i~~~g  244 (343)
T 2eih_A          240 VDHTG  244 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.21  E-value=3.6e-06  Score=70.98  Aligned_cols=79  Identities=22%  Similarity=0.267  Sum_probs=57.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+. +++...   .+|..+.+..+.+. +..  .+++|++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~---~~~~~~~~~~~~~~-~~~--~~g~Dvv  239 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKR---GINYRSEDFAAVIK-AET--GQGVDII  239 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSE---EEETTTSCHHHHHH-HHH--SSCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCE---EEeCCchHHHHHHH-HHh--CCCceEE
Confidence            5789999999999999999999999999999999888776554 455432   23444433333332 222  3479999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |+|+|.
T Consensus       240 id~~g~  245 (353)
T 4dup_A          240 LDMIGA  245 (353)
T ss_dssp             EESCCG
T ss_pred             EECCCH
Confidence            999983

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.21  E-value=2.8e-06  Score=71.20  Aligned_cols=78  Identities=15%  Similarity=0.108  Sum_probs=56.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      +|+++||+|+++++|.++++.+...|++|++++++.++.+.+. +++....   .|..+.+    +.+.+.+..  .++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lga~~~---~~~~~~~----~~~~~~~~~~~~g~D  215 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYV---IDTSTAP----LYETVMELTNGIGAD  215 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEE---EETTTSC----HHHHHHHHTTTSCEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hCCCcEE---EeCCccc----HHHHHHHHhCCCCCc
Confidence            5789999999999999999988889999999999988876654 4554322   2444433    223333332  2699


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|+|+|.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999883

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.19  E-value=2.5e-06  Score=71.33  Aligned_cols=78  Identities=18%  Similarity=0.232  Sum_probs=56.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      .|+++||+||+|++|.++++.+...|++|+++++++++++. .++++...   ..|..+.+    +.+.+.+..  .++|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~ga~~---~~~~~~~~----~~~~~~~~~~~~g~D  219 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI-AKEYGAEY---LINASKED----ILRQVLKFTNGKGVD  219 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSE---EEETTTSC----HHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCcE---EEeCCCch----HHHHHHHHhCCCCce
Confidence            57899999999999999999998999999999998877764 45565332   23444433    233333332  2699


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|+|+|.
T Consensus       220 ~vid~~g~  227 (334)
T 3qwb_A          220 ASFDSVGK  227 (334)
T ss_dssp             EEEECCGG
T ss_pred             EEEECCCh
Confidence            99999983

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.14  E-value=3.5e-06  Score=70.19  Aligned_cols=78  Identities=17%  Similarity=0.165  Sum_probs=56.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      .|+++||+||+|++|.+.++.+...|++|+++++++++.+.+. +++...   ..|.++.+.    .+.+.+..  .++|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~---~~~~~~~~~----~~~~~~~~~~~g~D  211 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWE---TIDYSHEDV----AKRVLELTDGKKCP  211 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSE---EEETTTSCH----HHHHHHHTTTCCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCE---EEeCCCccH----HHHHHHHhCCCCce
Confidence            5789999999999999999998889999999999887776554 555332   234444332    33333332  2699


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|+|+|.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999983

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.12  E-value=9.5e-06  Score=70.80  Aligned_cols=84  Identities=14%  Similarity=0.243  Sum_probs=64.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEe--cC--------CCCHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAP--VD--------VTSEEDVQKAVLLC   72 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~D--------ls~~~~~~~~~~~~   72 (254)
                      .|.++||+||+|++|...++.+...|++|+++++++++++.+ ++++....+-.  .|        .++.++.+++.+.+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            578999999999999999998888999999999877776655 55654322221  12        35677778888888


Q ss_pred             HHHcC--CCcEEEeCCc
Q psy12833         73 KDSFG--KLDVNVNCAG   87 (254)
Q Consensus        73 ~~~~~--~id~li~~ag   87 (254)
                      .+..+  ++|++|.++|
T Consensus       307 ~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHTSCCEEEEEECSC
T ss_pred             HHHhCCCCCcEEEEcCC
Confidence            87653  7999999987

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=98.12  E-value=6.6e-06  Score=66.72  Aligned_cols=73  Identities=18%  Similarity=0.303  Sum_probs=55.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCC-CceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGP-DVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.++++. ++...  ++.+.+          .  ...
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~l~----------~--~~~  182 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEALE----------G--QSF  182 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGGGT----------T--CCC
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHHhc----------c--cCC
Confidence            46899999998 7999999999999996 999999999999998888754 22222  322211          1  378


Q ss_pred             cEEEeCCccC
Q psy12833         80 DVNVNCAGIS   89 (254)
Q Consensus        80 d~li~~ag~~   89 (254)
                      |+|||+....
T Consensus       183 DivInaTp~g  192 (272)
T 3pwz_A          183 DIVVNATSAS  192 (272)
T ss_dssp             SEEEECSSGG
T ss_pred             CEEEECCCCC
Confidence            9999987653

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.11  E-value=8.8e-06  Score=60.19  Aligned_cols=76  Identities=17%  Similarity=0.103  Sum_probs=57.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .+++++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.++  ..+..+..|.++++.+.+.      ...+.|++
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~--~g~~~~~~d~~~~~~l~~~------~~~~ad~V   88 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE--FSGFTVVGDAAEFETLKEC------GMEKADMV   88 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT--CCSEEEESCTTSHHHHHTT------TGGGCSEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc--CCCcEEEecCCCHHHHHHc------CcccCCEE
Confidence            4678999996 9999999999999999999999998876654311  2456777888887654322      12368999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.+.+
T Consensus        89 i~~~~   93 (155)
T 2g1u_A           89 FAFTN   93 (155)
T ss_dssp             EECSS
T ss_pred             EEEeC
Confidence            98865

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.11  E-value=6.5e-06  Score=69.10  Aligned_cols=77  Identities=27%  Similarity=0.366  Sum_probs=55.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC--CCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG--KLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--~id   80 (254)
                      .|+++||+||+|++|.++++.+...|++|++++++.++.+.+ .+++... .+  |..  ++   +.+.+.+..+  ++|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~-v~--~~~--~~---~~~~v~~~~~~~g~D  229 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV-KSVGADI-VL--PLE--EG---WAKAVREATGGAGVD  229 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSE-EE--ESS--TT---HHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcE-Ee--cCc--hh---HHHHHHHHhCCCCce
Confidence            588999999999999999999999999999999988877654 4455432 22  222  22   2333444332  699


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|+|+|.
T Consensus       230 vvid~~g~  237 (342)
T 4eye_A          230 MVVDPIGG  237 (342)
T ss_dssp             EEEESCC-
T ss_pred             EEEECCch
Confidence            99999983

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.10  E-value=1.1e-05  Score=68.70  Aligned_cols=77  Identities=14%  Similarity=0.177  Sum_probs=59.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.|++++|+|+ |+||+++++.+...|++|++++|+.++++.+.+.++..+.   ++.++.+++.+++.       ..|+
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~-------~aDv  234 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVK-------RADL  234 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHH-------HCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHc-------CCCE
Confidence            46899999999 9999999999999999999999998887777665655432   23445555555543       5799


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|++++..
T Consensus       235 Vi~~~~~p  242 (377)
T 2vhw_A          235 VIGAVLVP  242 (377)
T ss_dssp             EEECCCCT
T ss_pred             EEECCCcC
Confidence            99998753

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.09  E-value=1e-05  Score=68.37  Aligned_cols=77  Identities=17%  Similarity=0.277  Sum_probs=57.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++++++|+|+ |++|+++++.+...|++|++++|+.++++.+.+.....+..+   ..+.+++.+.+.       ..|+
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~Dv  233 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVA-------EADL  233 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHH-------TCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee---eCCHHHHHHHHc-------CCCE
Confidence            35689999999 999999999999999999999999888877765443333222   234444443332       6899


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|++++..
T Consensus       234 VI~~~~~~  241 (361)
T 1pjc_A          234 LIGAVLVP  241 (361)
T ss_dssp             EEECCCCT
T ss_pred             EEECCCcC
Confidence            99999863

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=98.07  E-value=0.00032  Score=57.12  Aligned_cols=46  Identities=22%  Similarity=0.107  Sum_probs=39.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE   47 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~   47 (254)
                      ||+-+++.|.|+ |.+|.+++..|++.|++|++.+|+++.+++..+.
T Consensus         1 Mm~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            1 MTGITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            666678889986 8899999999999999999999998877665543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.06  E-value=1.5e-05  Score=67.56  Aligned_cols=71  Identities=14%  Similarity=0.117  Sum_probs=59.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +|+|.|| |++|+.+++.|++ .++|.+.+++.++++++    ...+..+.+|++|.+++.++++       +.|+||++
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~----~~~~~~~~~d~~d~~~l~~~~~-------~~DvVi~~   84 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV----KEFATPLKVDASNFDKLVEVMK-------EFELVIGA   84 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH----TTTSEEEECCTTCHHHHHHHHT-------TCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH----hccCCcEEEecCCHHHHHHHHh-------CCCEEEEe
Confidence            6999999 9999999998865 58999999987776655    3457788999999999888876       67999999


Q ss_pred             CccC
Q psy12833         86 AGIS   89 (254)
Q Consensus        86 ag~~   89 (254)
                      ++..
T Consensus        85 ~p~~   88 (365)
T 3abi_A           85 LPGF   88 (365)
T ss_dssp             CCGG
T ss_pred             cCCc
Confidence            8753

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=98.05  E-value=4.2e-06  Score=68.81  Aligned_cols=90  Identities=18%  Similarity=0.148  Sum_probs=58.8

Q ss_pred             CCCcE-EEEeCCCC-----------------h-HHHHHHHHHHHcCCEEEEeeCCCchhHHH---------HHHh-----
Q psy12833          2 LKGVV-GLVTGGAS-----------------G-LGKATVERIVREGGRVVLCDLPTSEGESV---------AKEL-----   48 (254)
Q Consensus         2 l~~~~-~lItGas~-----------------g-iG~a~a~~l~~~g~~v~~~~r~~~~~~~~---------~~~~-----   48 (254)
                      ++||+ ||||+|..                 | +|.++|+.++++|+.|+++.+...- ...         .+.+     
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl-~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSA-FPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSC-CTTGGGSCHHHHHHHCEECCC
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCc-CcchhccCccchhhhhccccc
Confidence            36777 99998754                 4 9999999999999999999885431 111         1100     


Q ss_pred             -CCCceEEecCCCCHHHHHHHHHHH------------------------------HHHcCCCcEEEeCCccCCCc
Q psy12833         49 -GPDVKFAPVDVTSEEDVQKAVLLC------------------------------KDSFGKLDVNVNCAGISCAF   92 (254)
Q Consensus        49 -~~~~~~~~~Dls~~~~~~~~~~~~------------------------------~~~~~~id~li~~ag~~~~~   92 (254)
                       ...+..+..|+....++.+.+...                              .+.+++.|++|.+|+++...
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence             122334555555555555555433                              23456799999999987543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.04  E-value=2.7e-05  Score=65.42  Aligned_cols=78  Identities=14%  Similarity=0.089  Sum_probs=55.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++++||+||+|++|.+.++.+...|++|++++++.++.+.+. +++....   .|..+.+..+.+.+....  .++|++|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~---~~~~~~~~~~~v~~~~~~--~g~D~vi  238 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHV---LNEKAPDFEATLREVMKA--EQPRIFL  238 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSEE---EETTSTTHHHHHHHHHHH--HCCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEE---EECCcHHHHHHHHHHhcC--CCCcEEE
Confidence            379999999999999999988889999999999888876654 5554322   244443322222222221  2799999


Q ss_pred             eCCc
Q psy12833         84 NCAG   87 (254)
Q Consensus        84 ~~ag   87 (254)
                      .|+|
T Consensus       239 d~~g  242 (349)
T 3pi7_A          239 DAVT  242 (349)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9988

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.03  E-value=5e-06  Score=67.75  Aligned_cols=72  Identities=19%  Similarity=0.349  Sum_probs=55.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCC--CceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGP--DVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.++++.  .+.....  .+   +.          ..
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~--~~---l~----------~~  187 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAF--EQ---LK----------QS  187 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEG--GG---CC----------SC
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeH--HH---hc----------CC
Confidence            46899999998 7999999999999996 999999999998888887643  2333322  11   10          36


Q ss_pred             CcEEEeCCccC
Q psy12833         79 LDVNVNCAGIS   89 (254)
Q Consensus        79 id~li~~ag~~   89 (254)
                      .|+||++....
T Consensus       188 aDiIInaTp~g  198 (281)
T 3o8q_A          188 YDVIINSTSAS  198 (281)
T ss_dssp             EEEEEECSCCC
T ss_pred             CCEEEEcCcCC
Confidence            89999987653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.03  E-value=1e-05  Score=68.55  Aligned_cols=74  Identities=20%  Similarity=0.189  Sum_probs=54.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC---chhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT---SEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +|+++||+|+ |++|..+++.+...|++|++++++.   ++.+. .++++.  ..+  | .+ +..+++ .+ . . +++
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~ga--~~v--~-~~-~~~~~~-~~-~-~-~~~  247 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEETKT--NYY--N-SS-NGYDKL-KD-S-V-GKF  247 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHHTC--EEE--E-CT-TCSHHH-HH-H-H-CCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHhCC--cee--c-hH-HHHHHH-HH-h-C-CCC
Confidence            3899999999 9999999999888999999999987   66543 345553  333  5 54 222222 22 2 2 589


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|+++|.
T Consensus       248 d~vid~~g~  256 (366)
T 2cdc_A          248 DVIIDATGA  256 (366)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.00  E-value=0.00016  Score=60.14  Aligned_cols=146  Identities=13%  Similarity=0.116  Sum_probs=85.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHhCC-Cce-EEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKELGP-DVK-FAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~-~~~-~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      .+++||||+|.+|..++..|+.+|  .+|++.+++++  +....++.. ... -+.. +++..++.+.++       ..|
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~-------gaD   78 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG-FLGQQQLEAALT-------GMD   78 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE-EESHHHHHHHHT-------TCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE-EeCCCCHHHHcC-------CCC
Confidence            479999999999999999999998  78999998765  222222211 110 1111 223344444444       789


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-------
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-------  153 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-------  153 (254)
                      ++|+++|......         .+..   ..+..|+.....+.+.+...-   .      ++.++++|-....       
T Consensus        79 vVi~~ag~~~~~g---------~~r~---dl~~~N~~~~~~i~~~i~~~~---p------~~~viv~SNPv~~~~~~~t~  137 (326)
T 1smk_A           79 LIIVPAGVPRKPG---------MTRD---DLFKINAGIVKTLCEGIAKCC---P------RAIVNLISNPVNSTVPIAAE  137 (326)
T ss_dssp             EEEECCCCCCCSS---------CCCS---HHHHHHHHHHHHHHHHHHHHC---T------TSEEEECCSSHHHHHHHHHH
T ss_pred             EEEEcCCcCCCCC---------CCHH---HHHHHHHHHHHHHHHHHHhhC---C------CeEEEEECCchHHHHHHHHH
Confidence            9999999643221         1222   336778777777766665532   1      3455555443333       


Q ss_pred             -----cCCCCCccchhchHHHHHhHHHHHHHhc
Q psy12833        154 -----EGQSGQVAYSASKSGIVGMTLPMARDLA  181 (254)
Q Consensus       154 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~  181 (254)
                           .++|.....+..-.-...+-..+++.+.
T Consensus       138 ~~~~~~~~p~~rviG~~~Ld~~r~~~~la~~l~  170 (326)
T 1smk_A          138 VFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLG  170 (326)
T ss_dssp             HHHHHTCCCTTSEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHccCCCcccEEEEeehHHHHHHHHHHHHhC
Confidence                 1344444555533224455666666663

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.95  E-value=2.2e-05  Score=64.59  Aligned_cols=73  Identities=23%  Similarity=0.198  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCC-HHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-EEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|+++||+|++|++|.++++.+...|++|+.+++++++.+.. ++++...   ..|..+ .+.    .+.+    +++|+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~---~~~~~~~~~~----~~~~----~~~d~  192 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEE---AATYAEVPER----AKAW----GGLDL  192 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSE---EEEGGGHHHH----HHHT----TSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCE---EEECCcchhH----HHHh----cCceE
Confidence            588999999999999999998889999999999988877765 4455321   234444 322    2222    57999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|+ +|.
T Consensus       193 vid-~g~  198 (302)
T 1iz0_A          193 VLE-VRG  198 (302)
T ss_dssp             EEE-CSC
T ss_pred             EEE-CCH
Confidence            999 873

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.94  E-value=4.5e-06  Score=60.98  Aligned_cols=71  Identities=11%  Similarity=0.089  Sum_probs=54.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +++++|.|+ |++|+.+++.|.+.|++|++++|+.++.+++.++++.  ...  +..+.   .++++       ..|++|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~--~~~--~~~~~---~~~~~-------~~Divi   85 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEY--EYV--LINDI---DSLIK-------NNDVII   85 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTC--EEE--ECSCH---HHHHH-------TCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCC--ceE--eecCH---HHHhc-------CCCEEE
Confidence            789999997 9999999999999999999999999988888877752  222  22232   23333       689999


Q ss_pred             eCCccC
Q psy12833         84 NCAGIS   89 (254)
Q Consensus        84 ~~ag~~   89 (254)
                      ++.+..
T Consensus        86 ~at~~~   91 (144)
T 3oj0_A           86 TATSSK   91 (144)
T ss_dssp             ECSCCS
T ss_pred             EeCCCC
Confidence            998753

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.94  E-value=2.8e-05  Score=65.09  Aligned_cols=76  Identities=29%  Similarity=0.259  Sum_probs=55.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+|+ +++|..+++.+...|++|+.++|++++.+.+ ++++..   ..+|.++.+ +.+.+.+..   +++|++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~---~~~d~~~~~-~~~~~~~~~---~~~d~v  234 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGAD---LVVNPLKED-AAKFMKEKV---GGVHAA  234 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCS---EEECTTTSC-HHHHHHHHH---SSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCC---EEecCCCcc-HHHHHHHHh---CCCCEE
Confidence            5789999999 8899999998889999999999988777655 345543   224665433 222222222   589999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+++|
T Consensus       235 id~~g  239 (339)
T 1rjw_A          235 VVTAV  239 (339)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.93  E-value=4.4e-05  Score=55.37  Aligned_cols=73  Identities=14%  Similarity=0.102  Sum_probs=58.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++++|.|+ |.+|..+++.|.+.|++|++++++++..+.+.+   ..+.++..|.++++.++++      ...+.|.+|.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---~g~~~i~gd~~~~~~l~~a------~i~~ad~vi~   77 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE---RGVRAVLGNAANEEIMQLA------HLECAKWLIL   77 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEESCTTSHHHHHHT------TGGGCSEEEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---cCCCEEECCCCCHHHHHhc------CcccCCEEEE
Confidence            46888887 889999999999999999999999988777654   3577899999998866553      1236799887


Q ss_pred             CCc
Q psy12833         85 CAG   87 (254)
Q Consensus        85 ~ag   87 (254)
                      +.+
T Consensus        78 ~~~   80 (140)
T 3fwz_A           78 TIP   80 (140)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            754

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.93  E-value=1.7e-05  Score=60.27  Aligned_cols=76  Identities=9%  Similarity=0.086  Sum_probs=58.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .+++++|.|+ |.+|..+++.|.+. |++|++++++++..+.+.+   ..+..+.+|.++++.+.++     ....+.|+
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~---~g~~~~~gd~~~~~~l~~~-----~~~~~ad~  108 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS---EGRNVISGDATDPDFWERI-----LDTGHVKL  108 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH---TTCCEEECCTTCHHHHHTB-----CSCCCCCE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH---CCCCEEEcCCCCHHHHHhc-----cCCCCCCE
Confidence            3557889985 99999999999999 9999999999887766543   2466788899988755432     01247899


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|.+.+
T Consensus       109 vi~~~~  114 (183)
T 3c85_A          109 VLLAMP  114 (183)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            998764

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.92  E-value=3.6e-05  Score=65.17  Aligned_cols=75  Identities=24%  Similarity=0.287  Sum_probs=57.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+|+ |++|...++.+...|++|++++++.++.+...++++...   ..|..+.+.+++       ..+++|++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~---v~~~~~~~~~~~-------~~~~~D~v  255 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS---FLVSRDQEQMQA-------AAGTLDGI  255 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE---EEETTCHHHHHH-------TTTCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce---EEeccCHHHHHH-------hhCCCCEE
Confidence            6889999996 999999999888899999999999888777665665432   235556543332       22479999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |.++|.
T Consensus       256 id~~g~  261 (366)
T 1yqd_A          256 IDTVSA  261 (366)
T ss_dssp             EECCSS
T ss_pred             EECCCc
Confidence            999984

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.92  E-value=2e-05  Score=66.63  Aligned_cols=78  Identities=21%  Similarity=0.178  Sum_probs=54.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+. +++... .  .|..+.+ +.+.+.+..  .+++|++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~-~--~~~~~~~-~~~~~~~~~--~~g~D~v  235 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDR-P--INYKTEP-VGTVLKQEY--PEGVDVV  235 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSE-E--EETTTSC-HHHHHHHHC--TTCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcE-E--EecCChh-HHHHHHHhc--CCCCCEE
Confidence            5789999999999999999998899999999999877666553 455432 2  2333322 222232221  1369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |+|+|
T Consensus       236 id~~g  240 (362)
T 2c0c_A          236 YESVG  240 (362)
T ss_dssp             EECSC
T ss_pred             EECCC
Confidence            99987

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.88  E-value=0.00019  Score=57.84  Aligned_cols=66  Identities=18%  Similarity=0.213  Sum_probs=52.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      +|+++|+|+ ||.|++++..|++.|.+|+++.|+.++.+++. +++  +...  ++.+.              ...|++|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~--~~~~--~~~~l--------------~~~DiVI  177 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG--CDCF--MEPPK--------------SAFDLII  177 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT--CEEE--SSCCS--------------SCCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC--CeEe--cHHHh--------------ccCCEEE
Confidence            689999997 99999999999999999999999999999888 665  3333  22221              1689999


Q ss_pred             eCCccC
Q psy12833         84 NCAGIS   89 (254)
Q Consensus        84 ~~ag~~   89 (254)
                      |+....
T Consensus       178 naTp~G  183 (269)
T 3phh_A          178 NATSAS  183 (269)
T ss_dssp             ECCTTC
T ss_pred             EcccCC
Confidence            987654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.87  E-value=4.1e-05  Score=64.28  Aligned_cols=77  Identities=17%  Similarity=0.197  Sum_probs=54.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|+++||+||+|++|.+.++.+...|++|++++++.++.+.+. +++... .  .|..+  +..+.+.+.  ..+++|++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~-v--i~~~~--~~~~~~~~~--~~~g~Dvv  221 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADI-V--LNHKE--SLLNQFKTQ--GIELVDYV  221 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSE-E--ECTTS--CHHHHHHHH--TCCCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE-E--EECCc--cHHHHHHHh--CCCCccEE
Confidence            5899999999999999999988899999999999877766554 455332 1  23322  122222222  22379999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.|+|
T Consensus       222 ~d~~g  226 (346)
T 3fbg_A          222 FCTFN  226 (346)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.80  E-value=8.8e-05  Score=59.32  Aligned_cols=76  Identities=22%  Similarity=0.362  Sum_probs=55.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC-------------------chhHHHHHHh---CCC--ceEEec
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT-------------------SEGESVAKEL---GPD--VKFAPV   57 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~---~~~--~~~~~~   57 (254)
                      ++++|+|.|+ ||+|..+++.|++.|. ++++++++.                   .+.+.+.+.+   +..  +..+..
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            4679999997 7999999999999997 899999987                   5555555444   333  455566


Q ss_pred             CCCCHHHHHHHHHHHHHHcCCCcEEEeCCc
Q psy12833         58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG   87 (254)
Q Consensus        58 Dls~~~~~~~~~~~~~~~~~~id~li~~ag   87 (254)
                      +++ .+.+.++++       ..|++|.+..
T Consensus       109 ~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          109 LLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             cCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            665 344444443       6899998754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.79  E-value=0.00022  Score=59.05  Aligned_cols=143  Identities=13%  Similarity=0.112  Sum_probs=87.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeC--CCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDL--PTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r--~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +++||||+|.+|..++..|+.+|.  ++.+.++  +.++++....++       +.++.....|    +++.+.      
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a------   71 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRI------   71 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH------
Confidence            699999999999999999998884  6888888  544333211111       1122222211    111222      


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-  153 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-  153 (254)
                       +...|++||+||......         .+.   ...+..|+.....+++.+...- +         ..++++|..... 
T Consensus        72 -l~gaD~Vi~~Ag~~~~~g---------~~r---~dl~~~N~~i~~~i~~~i~~~~-~---------~~vlv~SNPv~~~  128 (313)
T 1hye_A           72 -IDESDVVIITSGVPRKEG---------MSR---MDLAKTNAKIVGKYAKKIAEIC-D---------TKIFVITNPVDVM  128 (313)
T ss_dssp             -GTTCSEEEECCSCCCCTT---------CCH---HHHHHHHHHHHHHHHHHHHHHC-C---------CEEEECSSSHHHH
T ss_pred             -hCCCCEEEECCCCCCCCC---------CcH---HHHHHHHHHHHHHHHHHHHHhC-C---------eEEEEecCcHHHH
Confidence             337899999999643211         222   3458888888888877776653 2         456666553322 


Q ss_pred             -------cCCCCCccchh-chHHHHHhHHHHHHHhc
Q psy12833        154 -------EGQSGQVAYSA-SKSGIVGMTLPMARDLA  181 (254)
Q Consensus       154 -------~~~~~~~~Y~~-sK~a~~~~~~~la~e~~  181 (254)
                             .++|....++. +..-...+...+++.+.
T Consensus       129 t~~~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          129 TYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             HHHHHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhhCcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence                   23555567777 55556677777777764

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.79  E-value=3.1e-05  Score=64.93  Aligned_cols=76  Identities=24%  Similarity=0.364  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+||+|++|.+.++.+...|++|+++ ++.++++. .++++...    +| .+.+ ..+.+.+... ..++|++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~-~~~lGa~~----i~-~~~~-~~~~~~~~~~-~~g~D~v  220 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY-VRDLGATP----ID-ASRE-PEDYAAEHTA-GQGFDLV  220 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH-HHHHTSEE----EE-TTSC-HHHHHHHHHT-TSCEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH-HHHcCCCE----ec-cCCC-HHHHHHHHhc-CCCceEE
Confidence            57899999999999999999988999999988 66666554 45565432    33 3322 2222222221 1369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.|+|
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.78  E-value=6.6e-05  Score=63.70  Aligned_cols=76  Identities=20%  Similarity=0.246  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+||+|++|...++.+...|++|+.+++ .++.+ ..++++....   +|..+.+.    .+++.+ .+++|++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~-~~~~lGa~~v---~~~~~~~~----~~~~~~-~~g~D~v  252 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE-LVRKLGADDV---IDYKSGSV----EEQLKS-LKPFDFI  252 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH-HHHHTTCSEE---EETTSSCH----HHHHHT-SCCBSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH-HHHHcCCCEE---EECCchHH----HHHHhh-cCCCCEE
Confidence            4789999999999999999988889999998884 44444 3466654322   24433322    222322 2579999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |.|+|.
T Consensus       253 id~~g~  258 (375)
T 2vn8_A          253 LDNVGG  258 (375)
T ss_dssp             EESSCT
T ss_pred             EECCCC
Confidence            999984

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.78  E-value=0.00014  Score=61.28  Aligned_cols=82  Identities=21%  Similarity=0.249  Sum_probs=59.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|+++||+|+ |++|...++.+...|++ |+++++++++.+.+.+ +...+..+..|-.+.+++.+.+.+... ..++|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g~Dv  255 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-ICPEVVTHKVERLSAEESAKKIVESFG-GIEPAV  255 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-HCTTCEEEECCSCCHHHHHHHHHHHTS-SCCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hchhcccccccccchHHHHHHHHHHhC-CCCCCE
Confidence            5789999998 99999999888788997 8899998887776554 455565566665555554443333221 136999


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|.++|
T Consensus       256 vid~~g  261 (363)
T 3m6i_A          256 ALECTG  261 (363)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999987

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.76  E-value=6.6e-05  Score=58.70  Aligned_cols=73  Identities=21%  Similarity=0.157  Sum_probs=59.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +++|+|+ |.+|+.+++.|.++|++|++++++++..+++.++.  .+.++..|.++++.++++      ...+.|++|.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~--~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~   72 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL--KATIIHGDGSHKEILRDA------EVSKNDVVVIL   72 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS--SSEEEESCTTSHHHHHHH------TCCTTCEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc--CCeEEEcCCCCHHHHHhc------CcccCCEEEEe
Confidence            5899997 99999999999999999999999988887766543  467899999998866643      12367998877


Q ss_pred             Cc
Q psy12833         86 AG   87 (254)
Q Consensus        86 ag   87 (254)
                      .+
T Consensus        73 ~~   74 (218)
T 3l4b_C           73 TP   74 (218)
T ss_dssp             CS
T ss_pred             cC
Confidence            55

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.74  E-value=7.6e-05  Score=64.02  Aligned_cols=72  Identities=22%  Similarity=0.368  Sum_probs=55.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++.++++..  .  .+..   ++.+.+.       ..|
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~--~--~~~~---~l~~~l~-------~aD  229 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE--A--VRFD---ELVDHLA-------RSD  229 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE--E--CCGG---GHHHHHH-------TCS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--e--ecHH---hHHHHhc-------CCC
Confidence            46899999998 9999999999999998 9999999988877777776542  2  2222   2333332       689


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|.+.+.
T Consensus       230 vVi~at~~  237 (404)
T 1gpj_A          230 VVVSATAA  237 (404)
T ss_dssp             EEEECCSS
T ss_pred             EEEEccCC
Confidence            99999764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.70  E-value=1.3e-05  Score=65.18  Aligned_cols=70  Identities=10%  Similarity=0.170  Sum_probs=50.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+    .+...     ..+++.+.       ....|
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~----~~~~~-----~~~~~~~~-------~~~aD  177 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL----NINKI-----NLSHAESH-------LDEFD  177 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS----CCEEE-----CHHHHHHT-------GGGCS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH----hcccc-----cHhhHHHH-------hcCCC
Confidence            36889999998 7999999999999999 89999999887665542    22222     12332222       23689


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      +||++...
T Consensus       178 iVInaTp~  185 (277)
T 3don_A          178 IIINTTPA  185 (277)
T ss_dssp             EEEECCC-
T ss_pred             EEEECccC
Confidence            99998754

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.61  E-value=0.00043  Score=56.49  Aligned_cols=84  Identities=19%  Similarity=0.321  Sum_probs=59.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC------------------chhHHHHHH---hCC--CceEEec
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT------------------SEGESVAKE---LGP--DVKFAPV   57 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~---~~~--~~~~~~~   57 (254)
                      +++++|+|.|+ ||+|..+++.|++.|. ++.+++.+.                  .+.+.+++.   ++.  ++..+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            45689999998 8999999999999996 888998876                  333333332   343  4556677


Q ss_pred             CCCCHHHHHHHHHHHHHHc----CCCcEEEeCC
Q psy12833         58 DVTSEEDVQKAVLLCKDSF----GKLDVNVNCA   86 (254)
Q Consensus        58 Dls~~~~~~~~~~~~~~~~----~~id~li~~a   86 (254)
                      ++++.+.+..+++.+....    .+.|+||.+.
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            8877777777766543311    3689888764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.61  E-value=6.1e-05  Score=62.67  Aligned_cols=75  Identities=19%  Similarity=0.206  Sum_probs=50.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++||+||+|++|...++.+...|++|+.+++++++.+.+ ++++... .  +|..+.+  .+.+.++.  .+++|++|.|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~-~--i~~~~~~--~~~~~~~~--~~~~d~vid~  223 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKE-V--LAREDVM--AERIRPLD--KQRWAAAVDP  223 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSE-E--EECC-----------CC--SCCEEEEEEC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCcE-E--EecCCcH--HHHHHHhc--CCcccEEEEC
Confidence            799999999999999998888999999999988777665 4565432 1  3444432  12222221  1369999999


Q ss_pred             Ccc
Q psy12833         86 AGI   88 (254)
Q Consensus        86 ag~   88 (254)
                      +|.
T Consensus       224 ~g~  226 (328)
T 1xa0_A          224 VGG  226 (328)
T ss_dssp             STT
T ss_pred             CcH
Confidence            873

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.58  E-value=0.0012  Score=54.31  Aligned_cols=141  Identities=13%  Similarity=0.082  Sum_probs=80.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeC--CCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDL--PTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r--~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +++||||+|.+|..++..|+.+|.  ++++.++  +.++++....++      ..++.... +  +    .       +.
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~-------~a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----Y-------ED   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----G-------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----H-------HH
Confidence            699999999999999999998875  6888888  554433222222      12222222 1  1    1       12


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc--
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY--  153 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~--  153 (254)
                      +...|++|+++|......         .+..   ..+..|+.....+.+.+..    ..     +++.++++|-....  
T Consensus        68 ~~~aDvVi~~ag~~~~~g---------~~r~---dl~~~N~~i~~~i~~~i~~----~~-----p~~~viv~SNPv~~~~  126 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQPG---------QTRI---DLAGDNAPIMEDIQSSLDE----HN-----DDYISLTTSNPVDLLN  126 (303)
T ss_dssp             GTTCSEEEECCCCCCCTT---------CCHH---HHHHHHHHHHHHHHHHHHT----TC-----SCCEEEECCSSHHHHH
T ss_pred             hCCCCEEEEcCCCCCCCC---------CCHH---HHHHHHHHHHHHHHHHHHH----HC-----CCcEEEEeCChHHHHH
Confidence            337899999999643211         2322   3467777776666555444    32     13555554443322  


Q ss_pred             ------cCCCCCccchh-chHHHHHhHHHHHHHhc
Q psy12833        154 ------EGQSGQVAYSA-SKSGIVGMTLPMARDLA  181 (254)
Q Consensus       154 ------~~~~~~~~Y~~-sK~a~~~~~~~la~e~~  181 (254)
                            .++|....++. +-.=...+-..+++.+.
T Consensus       127 ~~~~~~~~~p~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          127 RHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             HHHHHHSSSCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCCHHHeeecccchhHHHHHHHHHHHhC
Confidence                  23444445555 22224556666666663

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.56  E-value=0.00012  Score=57.89  Aligned_cols=72  Identities=14%  Similarity=0.063  Sum_probs=56.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      .+.++|.|+ |.+|+.+++.|.++|+ |++++++++..+.+.    ..+.++.+|.+|++.++++      ...+.|.+|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a------~i~~ad~vi   76 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKA------NVRGARAVI   76 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----TTCEEEESCTTCHHHHHHT------TCTTCSEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----cCCeEEEcCCCCHHHHHhc------CcchhcEEE
Confidence            367999998 8999999999999999 999999888776654    3578899999998766544      123678888


Q ss_pred             eCCc
Q psy12833         84 NCAG   87 (254)
Q Consensus        84 ~~ag   87 (254)
                      .+.+
T Consensus        77 ~~~~   80 (234)
T 2aef_A           77 VDLE   80 (234)
T ss_dssp             ECCS
T ss_pred             EcCC
Confidence            7654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.55  E-value=0.00011  Score=61.54  Aligned_cols=76  Identities=24%  Similarity=0.319  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... .  .|..+.+    +.+.+.+..  .++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~Ga~~-~--~~~~~~~----~~~~v~~~~~g~g~  237 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKVGADY-V--INPFEED----VVKEVMDITDGNGV  237 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHHTCSE-E--ECTTTSC----HHHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE-E--ECCCCcC----HHHHHHHHcCCCCC
Confidence            5789999999 9999999998888999 999999987766554 4555321 2  3444422    223333322  269


Q ss_pred             cEEEeCCc
Q psy12833         80 DVNVNCAG   87 (254)
Q Consensus        80 d~li~~ag   87 (254)
                      |++|.++|
T Consensus       238 D~vid~~g  245 (348)
T 2d8a_A          238 DVFLEFSG  245 (348)
T ss_dssp             EEEEECSC
T ss_pred             CEEEECCC
Confidence            99999987

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.54  E-value=0.0002  Score=60.26  Aligned_cols=75  Identities=20%  Similarity=0.281  Sum_probs=55.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.++||+|+ |++|...++.+...|++|++++++.++.+...++++....   .|..+.+.++       +..+++|++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v---i~~~~~~~~~-------~~~~g~D~v  248 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY---VIGSDQAKMS-------ELADSLDYV  248 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE---EETTCHHHHH-------HSTTTEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee---eccccHHHHH-------HhcCCCCEE
Confidence            6889999996 9999999988778899999999998887776656654322   2344543332       222479999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |.++|.
T Consensus       249 id~~g~  254 (357)
T 2cf5_A          249 IDTVPV  254 (357)
T ss_dssp             EECCCS
T ss_pred             EECCCC
Confidence            999884

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.53  E-value=0.00071  Score=56.77  Aligned_cols=80  Identities=23%  Similarity=0.251  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCC-HHHHHHHHHHHHH-HcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-EEDVQKAVLLCKD-SFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~-~~~~id   80 (254)
                      .|+++||+|+ |++|...++.+...|++|+++++++++.+.+ ++++.. ..  .|..+ .+..+++.+.... ...++|
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~-~~--~~~~~~~~~~~~i~~~~~~~~g~g~D  242 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNCGAD-VT--LVVDPAKEEESSIIERIRSAIGDLPN  242 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCS-EE--EECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCC-EE--EcCcccccHHHHHHHHhccccCCCCC
Confidence            5789999997 8999999998888999999999987776654 456543 22  23332 2222222221110 013699


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       243 ~vid~~g  249 (352)
T 1e3j_A          243 VTIDCSG  249 (352)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.52  E-value=3.6e-05  Score=59.84  Aligned_cols=42  Identities=26%  Similarity=0.344  Sum_probs=37.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE   47 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~   47 (254)
                      +++|+||+|.+|.++++.|++.|++|++++|+.+..+++.++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998877766554

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.49  E-value=0.00092  Score=56.19  Aligned_cols=78  Identities=27%  Similarity=0.407  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCC--CHHHHHHHHHHHHHHcCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVT--SEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls--~~~~~~~~~~~~~~~~~~i   79 (254)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++.. ..  .|..  +.++..+.+.+...  +++
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~-~v--i~~~~~~~~~~~~~i~~~~~--~g~  243 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGAD-LV--LQISKESPQEIARKVEGQLG--CKP  243 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCS-EE--EECSSCCHHHHHHHHHHHHT--SCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCC-EE--EcCcccccchHHHHHHHHhC--CCC
Confidence            5789999996 8999999987778899 899999987766554 456543 22  2333  22332222222222  479


Q ss_pred             cEEEeCCc
Q psy12833         80 DVNVNCAG   87 (254)
Q Consensus        80 d~li~~ag   87 (254)
                      |++|.++|
T Consensus       244 D~vid~~g  251 (356)
T 1pl8_A          244 EVTIECTG  251 (356)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999987

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.49  E-value=0.00027  Score=58.98  Aligned_cols=76  Identities=21%  Similarity=0.276  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+|+ |++|...++.+...|++|+.+++++++.+.+ ++++....   .|..+.+..+    .+.+..+++|++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~---i~~~~~~~~~----~~~~~~g~~d~v  236 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEVA---VNARDTDPAA----WLQKEIGGAHGV  236 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEE---EETTTSCHHH----HHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCCEE---EeCCCcCHHH----HHHHhCCCCCEE
Confidence            5789999997 8999999988888999999999988777654 55654322   2444433222    333334589999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.++|
T Consensus       237 id~~g  241 (340)
T 3s2e_A          237 LVTAV  241 (340)
T ss_dssp             EESSC
T ss_pred             EEeCC
Confidence            99876

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.49  E-value=0.00054  Score=57.99  Aligned_cols=77  Identities=18%  Similarity=0.201  Sum_probs=53.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id~   81 (254)
                      .|.++||+||+|++|...++.+...|++|+.+. ++++.+ ..++++... .  .|..+.+    +.+.+.+.. +++|+
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa~~-v--i~~~~~~----~~~~v~~~t~g~~d~  234 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGAEE-V--FDYRAPN----LAQTIRTYTKNNLRY  234 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTCSE-E--EETTSTT----HHHHHHHHTTTCCCE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCCcE-E--EECCCch----HHHHHHHHccCCccE
Confidence            578999999999999999998888999999886 455544 556666432 2  2333332    233333332 46999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.++|.
T Consensus       235 v~d~~g~  241 (371)
T 3gqv_A          235 ALDCITN  241 (371)
T ss_dssp             EEESSCS
T ss_pred             EEECCCc
Confidence            9999883

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.48  E-value=0.00044  Score=58.26  Aligned_cols=81  Identities=19%  Similarity=0.124  Sum_probs=51.7

Q ss_pred             CC-cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh---HHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHH---
Q psy12833          3 KG-VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG---ESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDS---   75 (254)
Q Consensus         3 ~~-~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~---   75 (254)
                      .| .++||+||+|++|...++.+...|++|++++++.++.   .+..++++.... +  |..+. ...++.+++.+.   
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i--~~~~~-~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV-I--TEDQN-NSREFGPTIKEWIKQ  241 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE-E--EHHHH-HCGGGHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE-E--ecCcc-chHHHHHHHHHHhhc
Confidence            46 8999999999999999887777899999888776651   233456664321 2  21110 001223333322   


Q ss_pred             -cCCCcEEEeCCc
Q psy12833         76 -FGKLDVNVNCAG   87 (254)
Q Consensus        76 -~~~id~li~~ag   87 (254)
                       .+++|++|.++|
T Consensus       242 ~~~g~Dvvid~~G  254 (364)
T 1gu7_A          242 SGGEAKLALNCVG  254 (364)
T ss_dssp             HTCCEEEEEESSC
T ss_pred             cCCCceEEEECCC
Confidence             247999999987

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.46  E-value=0.00025  Score=59.82  Aligned_cols=78  Identities=21%  Similarity=0.198  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|+++||+| +|++|...++.+...|++|+++++++++.+.+ ++++.... +  | .+.+++.+.+.++.. ..++|++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v-i--~-~~~~~~~~~v~~~~~-g~g~D~v  261 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGADHG-I--N-RLEEDWVERVYALTG-DRGADHI  261 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEE-E--E-TTTSCHHHHHHHHHT-TCCEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCCCEE-E--c-CCcccHHHHHHHHhC-CCCceEE
Confidence            578999999 89999999998888999999999988777664 55654322 2  3 222222222222221 1269999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.++|
T Consensus       262 id~~g  266 (363)
T 3uog_A          262 LEIAG  266 (363)
T ss_dssp             EEETT
T ss_pred             EECCC
Confidence            99988

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.45  E-value=0.00041  Score=58.73  Aligned_cols=78  Identities=26%  Similarity=0.418  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCC-HHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-EEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id   80 (254)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+ .+++.+.+.++..  +++|
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~~~~~~~~~~~~~~--~g~D  264 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGATD-F--VNPNDHSEPISQVLSKMTN--GGVD  264 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCCE-E--ECGGGCSSCHHHHHHHHHT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHhCCce-E--EeccccchhHHHHHHHHhC--CCCC
Confidence            5789999996 9999999998888899 899999988877655 4555421 1  23332 1223333333332  4799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       265 ~vid~~g  271 (374)
T 1cdo_A          265 FSLECVG  271 (374)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.45  E-value=0.0008  Score=57.57  Aligned_cols=46  Identities=22%  Similarity=0.210  Sum_probs=39.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG   49 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   49 (254)
                      +.+++++|+|+ |.+|..+++.+...|++|++++++.++++.. ++++
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lG  215 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMG  215 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTT
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcC
Confidence            35889999997 8999999999999999999999998887765 4444

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.43  E-value=0.00046  Score=58.41  Aligned_cols=74  Identities=22%  Similarity=0.267  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.++||+|+ |++|...++.+...|++|+++++++++.+.+. +++...   ..|..+.+.+++    +.   +++|++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa~~---vi~~~~~~~~~~----~~---~g~Dvv  261 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADE---VVNSRNADEMAA----HL---KSFDFI  261 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSE---EEETTCHHHHHT----TT---TCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcE---EeccccHHHHHH----hh---cCCCEE
Confidence            5789999998 89999999887788999999999888777654 465432   235555543322    21   479999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |.++|.
T Consensus       262 id~~g~  267 (369)
T 1uuf_A          262 LNTVAA  267 (369)
T ss_dssp             EECCSS
T ss_pred             EECCCC
Confidence            999884

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.41  E-value=0.00041  Score=58.43  Aligned_cols=78  Identities=22%  Similarity=0.276  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|.++||+|+ |++|...++.+... |++|+.+++++++.+.+ ++++... .  .|..+.  +.+.+.++.. ..++|+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~--~~~~v~~~~~-g~g~Dv  257 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-ERLGADH-V--VDARRD--PVKQVMELTR-GRGVNV  257 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-HHTTCSE-E--EETTSC--HHHHHHHHTT-TCCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCE-E--Eeccch--HHHHHHHHhC-CCCCcE
Confidence            5789999999 89999999877778 99999999987776655 4565332 1  244443  2223332221 126999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.++|.
T Consensus       258 vid~~G~  264 (359)
T 1h2b_A          258 AMDFVGS  264 (359)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999883

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.40  E-value=0.00014  Score=60.87  Aligned_cols=76  Identities=17%  Similarity=0.190  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ +   .. ...|..+. ++.+.+.++.  ..++|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l---a~-~v~~~~~~-~~~~~~~~~~--~~g~D~  234 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y---AD-RLVNPLEE-DLLEVVRRVT--GSGVEV  234 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T---CS-EEECTTTS-CHHHHHHHHH--SSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---HH-hccCcCcc-CHHHHHHHhc--CCCCCE
Confidence            5789999999 9999999998888999 99999998766554422 2   11 12344442 2333333332  247999


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|.++|
T Consensus       235 vid~~g  240 (343)
T 2dq4_A          235 LLEFSG  240 (343)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999987

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.39  E-value=0.00085  Score=55.46  Aligned_cols=143  Identities=18%  Similarity=0.136  Sum_probs=80.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHhCCCceEEecCCCC---HHHHHHHHHHHHHHcCCCc
Q psy12833          6 VGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS---EEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~---~~~~~~~~~~~~~~~~~id   80 (254)
                      ++.|+||+|.+|..++..|+.+|  .+|++.++++  .+....++.....  .+++..   ..+.++.++       ..|
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~--~~~l~~~~~t~d~~~a~~-------~aD   70 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIET--RATVKGYLGPEQLPDCLK-------GCD   70 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSS--SCEEEEEESGGGHHHHHT-------TCS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCc--CceEEEecCCCCHHHHhC-------CCC
Confidence            68999999999999999999888  6899999987  3333334422111  011111   012233333       789


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc------
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE------  154 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~------  154 (254)
                      ++|+++|......         .+..+   .+..|......+.+.+..    ..     +++.++++|--....      
T Consensus        71 vVvi~ag~~~~~g---------~~r~d---l~~~n~~i~~~i~~~i~~----~~-----p~a~viv~sNPv~~~~~i~~~  129 (314)
T 1mld_A           71 VVVIPAGVPRKPG---------MTRDD---LFNTNATIVATLTAACAQ----HC-----PDAMICIISNPVNSTIPITAE  129 (314)
T ss_dssp             EEEECCSCCCCTT---------CCGGG---GHHHHHHHHHHHHHHHHH----HC-----TTSEEEECSSCHHHHHHHHHH
T ss_pred             EEEECCCcCCCCC---------CcHHH---HHHHHHHHHHHHHHHHHh----hC-----CCeEEEEECCCcchhHHHHHH
Confidence            9999999753221         12122   255555555444444433    32     157888876543321      


Q ss_pred             ------CCCCCccchhchHHHHHhHHHHHHHh
Q psy12833        155 ------GQSGQVAYSASKSGIVGMTLPMARDL  180 (254)
Q Consensus       155 ------~~~~~~~Y~~sK~a~~~~~~~la~e~  180 (254)
                            .+|.....+..-.-...+-..+++.+
T Consensus       130 ~~~~~~~~p~~rvig~t~Ld~~r~~~~la~~l  161 (314)
T 1mld_A          130 VFKKHGVYNPNKIFGVTTLDIVRANAFVAELK  161 (314)
T ss_dssp             HHHHTTCCCTTSEEECCHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCCcceEEEeecccHHHHHHHHHHHh
Confidence                  24444455553322445555666665

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.38  E-value=0.0011  Score=56.36  Aligned_cols=80  Identities=23%  Similarity=0.176  Sum_probs=54.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-C-CC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-G-KL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~-~i   79 (254)
                      .|+++||+| +|++|...++.+...| ++|+++++++++.+.+. +++... .+..+.++.+++   .+.+.+.. + ++
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~-vi~~~~~~~~~~---~~~v~~~~~g~g~  268 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADL-TLNRRETSVEER---RKAIMDITHGRGA  268 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSE-EEETTTSCHHHH---HHHHHHHTTTSCE
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCCcE-EEeccccCcchH---HHHHHHHhCCCCC
Confidence            478999999 8999999999888889 59999999887766554 565421 222221123333   33344433 2 69


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|.++|.
T Consensus       269 Dvvid~~g~  277 (380)
T 1vj0_A          269 DFILEATGD  277 (380)
T ss_dssp             EEEEECSSC
T ss_pred             cEEEECCCC
Confidence            999999883

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.37  E-value=0.00026  Score=59.32  Aligned_cols=69  Identities=22%  Similarity=0.276  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.++||+|+ |++|...++.+...|++|+++++++++.+.+ .+++....+     ++.+.+.+          ++|++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v~-----~~~~~~~~----------~~D~v  238 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSMGVKHFY-----TDPKQCKE----------ELDFI  238 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHTTCSEEE-----SSGGGCCS----------CEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCeec-----CCHHHHhc----------CCCEE
Confidence            5889999997 9999999988888899999999998887755 456544333     33332221          79999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |.++|.
T Consensus       239 id~~g~  244 (348)
T 3two_A          239 ISTIPT  244 (348)
T ss_dssp             EECCCS
T ss_pred             EECCCc
Confidence            999884

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.37  E-value=7.6e-05  Score=59.81  Aligned_cols=68  Identities=15%  Similarity=0.255  Sum_probs=49.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +| +++|.|+ ||.|++++..|.+.|+ +|++++|+.++++++.+++    ....+     +++.+.++       ..|+
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~----~~~~~-----~~~~~~~~-------~aDi  169 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV----KIFSL-----DQLDEVVK-------KAKS  169 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC----EEEEG-----GGHHHHHH-------TCSE
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc----ccCCH-----HHHHhhhc-------CCCE
Confidence            56 8999997 8999999999999998 8999999987766554432    22222     22333333       6799


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      ||++...
T Consensus       170 VInatp~  176 (253)
T 3u62_A          170 LFNTTSV  176 (253)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9998754

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.37  E-value=0.00043  Score=58.33  Aligned_cols=74  Identities=18%  Similarity=0.155  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-HHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-EDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~id~   81 (254)
                      .|+++||+|+ |++|...++.+...|++|+.+++++++.+.+. +++.... +  |..+. +    +.+.+.   +++|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v-~--~~~~~~~----~~~~~~---~~~D~  246 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHY-I--ATLEEGD----WGEKYF---DTFDL  246 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEE-E--EGGGTSC----HHHHSC---SCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCCEE-E--cCcCchH----HHHHhh---cCCCE
Confidence            5789999999 99999999888788999999999888876654 4654322 2  33222 2    122222   47999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.++|.
T Consensus       247 vid~~g~  253 (360)
T 1piw_A          247 IVVCASS  253 (360)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999885

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.36  E-value=0.00052  Score=58.28  Aligned_cols=80  Identities=18%  Similarity=0.164  Sum_probs=54.1

Q ss_pred             CCcEEEEeC-CCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTG-GASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItG-as~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|.++||.| |+|++|...++.+...|++|+.+++++++.+.+ .+++....   .|..+.+..+++.+....  .++|+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~---~~~~~~~~~~~v~~~t~~--~g~d~  243 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL-KAQGAVHV---CNAASPTFMQDLTEALVS--TGATI  243 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH-HHTTCSCE---EETTSTTHHHHHHHHHHH--HCCCE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HhCCCcEE---EeCCChHHHHHHHHHhcC--CCceE
Confidence            467899997 899999999988888899999999987776655 45654322   233333322222222211  26999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.|+|.
T Consensus       244 v~d~~g~  250 (379)
T 3iup_A          244 AFDATGG  250 (379)
T ss_dssp             EEESCEE
T ss_pred             EEECCCc
Confidence            9999984

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.35  E-value=0.00051  Score=58.16  Aligned_cols=78  Identities=21%  Similarity=0.344  Sum_probs=53.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCC-HHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-EEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id   80 (254)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+ .+++.+.+.++..  +++|
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~~~~~~~~~~~~~~--~g~D  263 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGATE-C--VNPQDYKKPIQEVLTEMSN--GGVD  263 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSE-E--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCce-E--ecccccchhHHHHHHHHhC--CCCc
Confidence            5789999995 9999999998888899 899999988877655 4565421 2  23332 1123333333322  4799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       264 ~vid~~g  270 (374)
T 2jhf_A          264 FSFEVIG  270 (374)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.35  E-value=0.0002  Score=59.86  Aligned_cols=151  Identities=15%  Similarity=0.067  Sum_probs=79.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |.++++.|+|++|.+|..++..++.+|.  +|++++.+.++++-...++.... +...++.-..+..+.++       ..
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~~~~i~~t~d~~~al~-------dA   77 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FEGLNLTFTSDIKEALT-------DA   77 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CTTCCCEEESCHHHHHT-------TE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CCCCceEEcCCHHHHhC-------CC
Confidence            5678999999999999999999999984  89999998776554333331100 00011110011222233       67


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcE-EEEEeccccc-----
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGV-IINTASIAAY-----  153 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~-ii~vss~~~~-----  153 (254)
                      |++|.++|......         ++   -.+.+..|..-.    +.+.+.+.+..+     ++. ++++|--...     
T Consensus        78 DvVvitaG~p~kpG---------~~---R~dLl~~N~~I~----~~i~~~i~~~~p-----~a~~vlvvsNPvd~~t~i~  136 (343)
T 3fi9_A           78 KYIVSSGGAPRKEG---------MT---REDLLKGNAEIA----AQLGKDIKSYCP-----DCKHVIIIFNPADITGLVT  136 (343)
T ss_dssp             EEEEECCC----------------C---HHHHHHHHHHHH----HHHHHHHHHHCT-----TCCEEEECSSSHHHHHHHH
T ss_pred             CEEEEccCCCCCCC---------CC---HHHHHHHHHHHH----HHHHHHHHHhcc-----CcEEEEEecCchHHHHHHH
Confidence            99999998632111         22   234455565444    444444444331     454 6666653321     


Q ss_pred             ---cCCCCCccchhchHHHHHhHHHHHHHhc
Q psy12833        154 ---EGQSGQVAYSASKSGIVGMTLPMARDLA  181 (254)
Q Consensus       154 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~  181 (254)
                         .++|.....+.+..=...|-..+++++.
T Consensus       137 ~k~sg~p~~rv~g~t~LDs~R~~~~la~~l~  167 (343)
T 3fi9_A          137 LIYSGLKPSQVTTLAGLDSTRLQSELAKHFG  167 (343)
T ss_dssp             HHHHTCCGGGEEEECCHHHHHHHHHHHHHHT
T ss_pred             HHHcCCCcceEEEecCcHHHHHHHHHHHHhC
Confidence               1333332334433222345566676664

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.34  E-value=0.00042  Score=58.48  Aligned_cols=76  Identities=20%  Similarity=0.173  Sum_probs=52.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHH-cCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVR-EGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id   80 (254)
                      .|.++||+||+|++|...++.+.. .|++|+.+++++++.+.+ .+++....   .|..+  +   +.+.+.+.. +++|
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~lGad~v---i~~~~--~---~~~~v~~~~~~g~D  241 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSLGAHHV---IDHSK--P---LAAEVAALGLGAPA  241 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHTTCSEE---ECTTS--C---HHHHHHTTCSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHcCCCEE---EeCCC--C---HHHHHHHhcCCCce
Confidence            578999999999999888775544 589999999987776655 45654321   23332  1   233333332 4799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.|+|
T Consensus       242 vvid~~g  248 (363)
T 4dvj_A          242 FVFSTTH  248 (363)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.32  E-value=0.00069  Score=57.36  Aligned_cols=78  Identities=22%  Similarity=0.339  Sum_probs=53.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCC-HHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-EEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id   80 (254)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+ .+++.+.+.++..  +++|
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-v--i~~~~~~~~~~~~v~~~~~--~g~D  267 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGATD-C--LNPRELDKPVQDVITELTA--GGVD  267 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSE-E--ECGGGCSSCHHHHHHHHHT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCcE-E--EccccccchHHHHHHHHhC--CCcc
Confidence            5789999996 8999999988778899 899999988877655 4565421 1  23332 1123333333322  4799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       268 vvid~~G  274 (376)
T 1e3i_A          268 YSLDCAG  274 (376)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.31  E-value=0.00052  Score=58.07  Aligned_cols=78  Identities=24%  Similarity=0.415  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCC-HHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-EEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id   80 (254)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+ .+++.+.+.++..  +++|
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~~~~~~~~v~~~~~--~g~D  262 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEFGATE-C--INPQDFSKPIQEVLIEMTD--GGVD  262 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHHTCSE-E--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCce-E--eccccccccHHHHHHHHhC--CCCC
Confidence            5789999996 9999999988778899 899999988877655 4565422 1  23332 1123333333322  4799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       263 ~vid~~g  269 (373)
T 2fzw_A          263 YSFECIG  269 (373)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.28  E-value=0.00011  Score=59.56  Aligned_cols=71  Identities=25%  Similarity=0.414  Sum_probs=51.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +++++++|.|+ |++|++++..|.+.|++|++++|+.++.+++.++++  +.  ..+  +   +.+.+       ...|+
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g--~~--~~~--~---~~~~~-------~~aDi  189 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP--LE--VVN--S---PEEVI-------DKVQV  189 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSC--EE--ECS--C---GGGTG-------GGCSE
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcC--Ce--eeh--h---HHhhh-------cCCCE
Confidence            35789999997 799999999999999999999999877776655443  11  121  1   11122       26899


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|++....
T Consensus       190 Vi~atp~~  197 (275)
T 2hk9_A          190 IVNTTSVG  197 (275)
T ss_dssp             EEECSSTT
T ss_pred             EEEeCCCC
Confidence            99998754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.27  E-value=0.00032  Score=57.78  Aligned_cols=80  Identities=18%  Similarity=0.187  Sum_probs=56.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceE-EecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKF-APVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++|++++|.|++.-+|+-+++.|...|++|++++|+..+..+..+++....+. ..+..++++++.+.+.       .-|
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~-------~AD  247 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------DSD  247 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------HCS
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc-------cCC
Confidence            46899999999888999999999999999999999854433333333222221 1111144566666666       569


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|..+|.
T Consensus       248 IVIsAtg~  255 (320)
T 1edz_A          248 VVITGVPS  255 (320)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998885

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.26  E-value=0.00034  Score=59.32  Aligned_cols=79  Identities=25%  Similarity=0.422  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCC-HHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTS-EEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id   80 (254)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++++. .++++... .  .|..+ .+++.+.+.++..  +++|
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~-a~~lGa~~-v--i~~~~~~~~~~~~i~~~~~--gg~D  265 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET-AKKFGVNE-F--VNPKDHDKPIQEVIVDLTD--GGVD  265 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH-HHTTTCCE-E--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-HHHcCCcE-E--EccccCchhHHHHHHHhcC--CCCC
Confidence            4789999998 9999999988888899 89999999888774 45555432 1  23321 1222333333222  3799


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|.++|.
T Consensus       266 ~vid~~g~  273 (378)
T 3uko_A          266 YSFECIGN  273 (378)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999883

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.26  E-value=0.00037  Score=59.01  Aligned_cols=76  Identities=28%  Similarity=0.421  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHH---H-cC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKD---S-FG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~---~-~~   77 (254)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+ ..++++...   ..|.++.+    +.+.+.+   . .+
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~---vi~~~~~~----~~~~i~~~~~~~~g  252 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEVGATA---TVDPSAGD----VVEAIAGPVGLVPG  252 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHTCSE---EECTTSSC----HHHHHHSTTSSSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCCE---EECCCCcC----HHHHHHhhhhccCC
Confidence            5789999998 8999999988888899 8888888776655 445565432   23444433    2333333   2 24


Q ss_pred             CCcEEEeCCc
Q psy12833         78 KLDVNVNCAG   87 (254)
Q Consensus        78 ~id~li~~ag   87 (254)
                      ++|++|.++|
T Consensus       253 g~Dvvid~~G  262 (370)
T 4ej6_A          253 GVDVVIECAG  262 (370)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.24  E-value=0.001  Score=53.09  Aligned_cols=77  Identities=26%  Similarity=0.387  Sum_probs=51.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC-------------------chhHHHHHHh---CCC--ceEEe
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT-------------------SEGESVAKEL---GPD--VKFAP   56 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~---~~~--~~~~~   56 (254)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+   +..  +..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            35689999998 7899999999999997 788886653                   3334343333   333  44455


Q ss_pred             cCCCCHHHHHHHHHHHHHHcCCCcEEEeCCc
Q psy12833         57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAG   87 (254)
Q Consensus        57 ~Dls~~~~~~~~~~~~~~~~~~id~li~~ag   87 (254)
                      .+++ .+.+.++++       ..|+||.+..
T Consensus       105 ~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          105 QRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             SCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             ccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            5554 344555544       5799987743

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.23  E-value=0.0035  Score=52.91  Aligned_cols=83  Identities=20%  Similarity=0.281  Sum_probs=57.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCC-----------CHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT-----------SEEDVQKAVLL   71 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls-----------~~~~~~~~~~~   71 (254)
                      .+++++|+|+ |.+|..+++.+...|++|++++|+.++++.+.+ ++.  .++..|..           ..+....-.+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa--~~~~l~~~~~~~~gya~~~~~~~~~~~~~~  258 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGA--QWLDLGIDAAGEGGYARELSEAERAQQQQA  258 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTC--EECCCC-------------CHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC--eEEeccccccccccchhhhhHHHHhhhHHH
Confidence            5789999999 899999999999999999999999988877654 443  33333210           01112333444


Q ss_pred             HHHHcCCCcEEEeCCccC
Q psy12833         72 CKDSFGKLDVNVNCAGIS   89 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~   89 (254)
                      +.+.....|++|.++...
T Consensus       259 l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          259 LEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHTTCSEEEECCCCT
T ss_pred             HHHHHhcCCEEEECCCCC
Confidence            455556899999887543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.22  E-value=0.00027  Score=57.45  Aligned_cols=68  Identities=18%  Similarity=0.315  Sum_probs=51.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|+++|+|+ ||.|++++..|.+.|+ +|+++.|+.++++++.+++    ..+.     .+++       .+ . ..|
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~----~~~~-----~~~l-------~~-l-~~D  180 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF----KVIS-----YDEL-------SN-L-KGD  180 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS----EEEE-----HHHH-------TT-C-CCS
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc----Cccc-----HHHH-------Hh-c-cCC
Confidence            46899999998 6999999999999998 8999999988877765432    2221     2222       22 3 689


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      +|||+...
T Consensus       181 ivInaTp~  188 (282)
T 3fbt_A          181 VIINCTPK  188 (282)
T ss_dssp             EEEECSST
T ss_pred             EEEECCcc
Confidence            99998764

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.21  E-value=0.0018  Score=54.14  Aligned_cols=76  Identities=17%  Similarity=0.155  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc--CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE--GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      .|.++||+|+ |++|...++.+...  |++|+.+++++++.+.+ ++++... .  .|..+.   .+..+++.+ ..++|
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~---~~~~~~~~~-g~g~D  240 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA-LELGADY-V--SEMKDA---ESLINKLTD-GLGAS  240 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-HHHTCSE-E--ECHHHH---HHHHHHHHT-TCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-HHhCCCE-E--eccccc---hHHHHHhhc-CCCcc
Confidence            5789999999 89999999887788  99999999987776655 4455321 1  232220   122333332 12799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       241 ~vid~~g  247 (344)
T 2h6e_A          241 IAIDLVG  247 (344)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.19  E-value=0.00086  Score=56.70  Aligned_cols=78  Identities=21%  Similarity=0.301  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCH-HHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE-EDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~~id   80 (254)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+. +++.+.+.++..  +++|
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-v--i~~~~~~~~~~~~i~~~t~--gg~D  263 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGATE-C--LNPKDYDKPIYEVICEKTN--GGVD  263 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTCSE-E--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcE-E--EecccccchHHHHHHHHhC--CCCC
Confidence            5789999996 8999999887777899 899999988777655 4565432 2  233220 122222332222  4799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       264 vvid~~g  270 (373)
T 1p0f_A          264 YAVECAG  270 (373)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.18  E-value=0.0041  Score=49.39  Aligned_cols=77  Identities=13%  Similarity=0.079  Sum_probs=59.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++.|.|++|.+|+.+++.+.+. +++++.+....+.++++..   ..+. +..|+|+++...+.++.+.+.  ++++|+-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~~~D-vvIDfT~p~a~~~~~~~a~~~--g~~~Vig   75 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---GNTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVVG   75 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---TTCC-EEEECSCTTTHHHHHHHHHHT--TCEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---cCCc-EEEEccChHHHHHHHHHHHHc--CCCEEEc
Confidence            6899999999999999998865 8898765544445554443   1233 778999999999999888776  7899887


Q ss_pred             CCcc
Q psy12833         85 CAGI   88 (254)
Q Consensus        85 ~ag~   88 (254)
                      ..|.
T Consensus        76 TTG~   79 (245)
T 1p9l_A           76 TTGF   79 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            7763

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.16  E-value=0.00073  Score=56.82  Aligned_cols=73  Identities=18%  Similarity=0.211  Sum_probs=51.5

Q ss_pred             CcEEEEeCCCChHHHHH-HHHH-HHcCCE-EEEeeCCCc---hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          4 GVVGLVTGGASGLGKAT-VERI-VREGGR-VVLCDLPTS---EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         4 ~~~~lItGas~giG~a~-a~~l-~~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +.++||+|+ |++|... ++.+ ...|++ |+.++++.+   +.+.+ ++++.  ..+  |..+.+ +.+ +.++   .+
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lGa--~~v--~~~~~~-~~~-i~~~---~g  241 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELDA--TYV--DSRQTP-VED-VPDV---YE  241 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTTC--EEE--ETTTSC-GGG-HHHH---SC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcCC--ccc--CCCccC-HHH-HHHh---CC
Confidence            389999999 9999998 7766 567997 999999887   66654 45553  333  544432 223 3333   24


Q ss_pred             CCcEEEeCCc
Q psy12833         78 KLDVNVNCAG   87 (254)
Q Consensus        78 ~id~li~~ag   87 (254)
                      ++|++|.++|
T Consensus       242 g~Dvvid~~g  251 (357)
T 2b5w_A          242 QMDFIYEATG  251 (357)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.16  E-value=0.0036  Score=50.77  Aligned_cols=83  Identities=12%  Similarity=0.125  Sum_probs=57.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC---EEEEeeCCCchhHHHHHHhCC-----------CceEEecCCCCHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG---RVVLCDLPTSEGESVAKELGP-----------DVKFAPVDVTSEEDVQKA   68 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~-----------~~~~~~~Dls~~~~~~~~   68 (254)
                      +.+++.|.|+ |.+|.+++..|.+.|+   +|++++|++++++++.++++.           ...++..-+ .+..++++
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav-~p~~~~~v   79 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV-KPHQIKMV   79 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS-CGGGHHHH
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe-CHHHHHHH
Confidence            3467888888 9999999999999998   899999999988887765321           122222222 45667777


Q ss_pred             HHHHHHH-cCCCcEEEeCCc
Q psy12833         69 VLLCKDS-FGKLDVNVNCAG   87 (254)
Q Consensus        69 ~~~~~~~-~~~id~li~~ag   87 (254)
                      ++++... ..+-.++|++++
T Consensus        80 l~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           80 CEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHhhccCCCeEEEEecC
Confidence            7777665 433337777654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.16  E-value=0.0015  Score=55.54  Aligned_cols=46  Identities=26%  Similarity=0.255  Sum_probs=39.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP   50 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   50 (254)
                      .+++++|+|+ |++|+++++.+...|++|++++|+..+++...+ ++.
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga  216 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGG  216 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC
Confidence            5889999997 899999999999999999999999887776644 543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.15  E-value=0.0025  Score=54.29  Aligned_cols=83  Identities=27%  Similarity=0.315  Sum_probs=55.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecC----------------CCCHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVD----------------VTSEEDVQ   66 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D----------------ls~~~~~~   66 (254)
                      .+.+++|+|+ |.+|..+++.+...|++|++++++..+++...+ ++.  .++..+                ++++. ..
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~--~~~~~~~~~~~d~~~~~~ya~e~s~~~-~~  263 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGA--KFIAVEDEEFKAAETAGGYAKEMSGEY-QV  263 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTC--EECCCCC-----------------CHH-HH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCC--ceeecccccccccccccchhhhcchhh-hh
Confidence            4679999999 899999999999999999999999988777654 443  333332                22221 11


Q ss_pred             HHHHHHHHHcCCCcEEEeCCccCC
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAGISC   90 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag~~~   90 (254)
                      .-.+.+.+.....|++|.++....
T Consensus       264 ~~~~~l~e~l~~aDVVI~tvlipg  287 (405)
T 4dio_A          264 KQAALVAEHIAKQDIVITTALIPG  287 (405)
T ss_dssp             HHHHHHHHHHHTCSEEEECCCCSS
T ss_pred             hhHhHHHHHhcCCCEEEECCcCCC
Confidence            112222222237899999886543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.10  E-value=0.0014  Score=56.12  Aligned_cols=77  Identities=27%  Similarity=0.394  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-C-CC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-G-KL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~-~i   79 (254)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+.+    +.+.+.+.. + ++
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~~----~~~~i~~~t~g~g~  283 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADH-V--IDPTKEN----FVEAVLDYTNGLGA  283 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTCSE-E--ECTTTSC----HHHHHHHHTTTCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCCE-E--EcCCCCC----HHHHHHHHhCCCCC
Confidence            5789999998 8999999988878899 899999887766544 5565432 2  2333332    333444433 2 69


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|.++|.
T Consensus       284 D~vid~~g~  292 (404)
T 3ip1_A          284 KLFLEATGV  292 (404)
T ss_dssp             SEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999999883

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.10  E-value=0.00046  Score=57.13  Aligned_cols=73  Identities=19%  Similarity=0.213  Sum_probs=50.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      |+ +||+||+|++|...++.+...|++|+.+++++++.+.+ ++++....+-.-|...       ++++  ..+++|++|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~-------~~~~--~~~~~d~v~  216 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL-KSLGANRILSRDEFAE-------SRPL--EKQLWAGAI  216 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTCSEEEEGGGSSC-------CCSS--CCCCEEEEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEecCCHHH-------HHhh--cCCCccEEE
Confidence            45 99999999999999998888999999999988877655 4565433222222111       1111  114689999


Q ss_pred             eCCc
Q psy12833         84 NCAG   87 (254)
Q Consensus        84 ~~ag   87 (254)
                      .++|
T Consensus       217 d~~g  220 (324)
T 3nx4_A          217 DTVG  220 (324)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            8876

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.10  E-value=0.00073  Score=55.92  Aligned_cols=73  Identities=21%  Similarity=0.334  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.++||+||+|++|...++.+...|++|+.++++ ++ .+..++++... .+  |..+.+...       +...++|++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~~lGa~~-~i--~~~~~~~~~-------~~~~g~D~v  219 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLKALGAEQ-CI--NYHEEDFLL-------AISTPVDAV  219 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHHHHTCSE-EE--ETTTSCHHH-------HCCSCEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHHHcCCCE-EE--eCCCcchhh-------hhccCCCEE
Confidence            57899999999999999999888899999988754 33 44556666432 22  333332111       112479999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.++|
T Consensus       220 ~d~~g  224 (321)
T 3tqh_A          220 IDLVG  224 (321)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.05  E-value=0.0014  Score=56.33  Aligned_cols=59  Identities=19%  Similarity=0.195  Sum_probs=45.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK   67 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~   67 (254)
                      ..++|.|. |.+|+.+++.|.++|+.|++++++++..+.+.+   ..+.++..|.++++.+++
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~---~g~~vi~GDat~~~~L~~   63 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK---FGMKVFYGDATRMDLLES   63 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH---TTCCCEESCTTCHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh---CCCeEEEcCCCCHHHHHh
Confidence            46899997 889999999999999999999999888776653   234556666666664443

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.03  E-value=0.0015  Score=53.52  Aligned_cols=70  Identities=14%  Similarity=0.219  Sum_probs=50.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.|++++|.|+ |++|+++++.|...|++|++.+|+.++.+...+ .+  +..+..     +++.+++       ...|+
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g--~~~~~~-----~~l~~~l-------~~aDv  218 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MG--LVPFHT-----DELKEHV-------KDIDI  218 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT--CEEEEG-----GGHHHHS-------TTCSE
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CC--CeEEch-----hhHHHHh-------hCCCE
Confidence            57899999997 999999999999999999999998766554432 22  222221     2233332       37899


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|++..
T Consensus       219 Vi~~~p  224 (300)
T 2rir_A          219 CINTIP  224 (300)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999876

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.00  E-value=0.009  Score=49.52  Aligned_cols=112  Identities=13%  Similarity=0.100  Sum_probs=69.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhC-------CCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELG-------PDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      .+++.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++.       .++.....|              .+
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--------------~~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--------------YE   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--------------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--------------HH
Confidence            568999997 9999999999999987  89999998776665433331       233333222              11


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      .+..-|++|.++|......         ++-   ...+..|..-    .+...+.+.+..     +++.++++|--.
T Consensus        70 a~~~aDvVvi~ag~p~kpG---------~~R---~dL~~~N~~I----v~~i~~~I~~~~-----p~a~vlvvtNPv  125 (326)
T 3pqe_A           70 DCKDADIVCICAGANQKPG---------ETR---LELVEKNLKI----FKGIVSEVMASG-----FDGIFLVATNPV  125 (326)
T ss_dssp             GGTTCSEEEECCSCCCCTT---------CCH---HHHHHHHHHH----HHHHHHHHHHTT-----CCSEEEECSSSH
T ss_pred             HhCCCCEEEEecccCCCCC---------ccH---HHHHHHHHHH----HHHHHHHHHHhc-----CCeEEEEcCChH
Confidence            2347899999998642211         222   2345555544    344444444433     156788777543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.98  E-value=0.011  Score=48.73  Aligned_cols=36  Identities=28%  Similarity=0.273  Sum_probs=32.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~   42 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQ   42 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccc
Confidence            56678999997 9999999999999999 999999984

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.98  E-value=0.0021  Score=54.32  Aligned_cols=76  Identities=17%  Similarity=0.242  Sum_probs=51.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id   80 (254)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... .+  |..+.+    +.+++.+.. +++|
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-vi--~~~~~~----~~~~~~~~~~gg~D  260 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGATH-VI--NSKTQD----PVAAIKEITDGGVN  260 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTCSE-EE--ETTTSC----HHHHHHHHTTSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCCE-Ee--cCCccC----HHHHHHHhcCCCCc
Confidence            4789999995 8999999887777899 699999987776654 4555432 22  333322    222333322 3799


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++|.++|
T Consensus       261 ~vid~~g  267 (371)
T 1f8f_A          261 FALESTG  267 (371)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.96  E-value=0.0014  Score=53.02  Aligned_cols=40  Identities=20%  Similarity=0.473  Sum_probs=35.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG   41 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~   41 (254)
                      ++||+++|.|+|+-+|+.++..|..+|++|+++.|+...+
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L  197 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDL  197 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            5799999999999999999999999999999998765433

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.96  E-value=0.0014  Score=53.56  Aligned_cols=70  Identities=17%  Similarity=0.220  Sum_probs=50.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.|++++|.|+ |+||+++++.|...|++|++.+|+.++.+... +.+  +..+.     .+++.+++       ...|+
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g--~~~~~-----~~~l~~~l-------~~aDv  216 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMG--MEPFH-----ISKAAQEL-------RDVDV  216 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTT--SEEEE-----GGGHHHHT-------TTCSE
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCC--CeecC-----hhhHHHHh-------cCCCE
Confidence            57899999996 89999999999999999999999876655443 333  23321     12233332       37899


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +++++.
T Consensus       217 Vi~~~p  222 (293)
T 3d4o_A          217 CINTIP  222 (293)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            998864

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.95  E-value=0.021  Score=46.07  Aligned_cols=81  Identities=15%  Similarity=0.300  Sum_probs=54.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHH-cCCEEE-EeeCCCch--hHHH----------------HHHhCCCceEEecCCCCHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVR-EGGRVV-LCDLPTSE--GESV----------------AKELGPDVKFAPVDVTSEE   63 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~-~g~~v~-~~~r~~~~--~~~~----------------~~~~~~~~~~~~~Dls~~~   63 (254)
                      .-++.|+|++|.+|+.+++.+.+ .|++++ +++++.+.  .++.                .+++-..+. +..|++.++
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~D-vVIDft~p~   83 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPE   83 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCC-EEEEcCChH
Confidence            34799999999999999998874 577776 55665432  1110                001001222 455889999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEeCCc
Q psy12833         64 DVQKAVLLCKDSFGKLDVNVNCAG   87 (254)
Q Consensus        64 ~~~~~~~~~~~~~~~id~li~~ag   87 (254)
                      ...+.+..+.+.  ++++++-..|
T Consensus        84 ~~~~~~~~a~~~--G~~vVigTtG  105 (273)
T 1dih_A           84 GTLNHLAFCRQH--GKGMVIGTTG  105 (273)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCC
T ss_pred             HHHHHHHHHHhC--CCCEEEECCC
Confidence            999888888886  7788876665

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.95  E-value=0.013  Score=48.54  Aligned_cols=115  Identities=17%  Similarity=0.110  Sum_probs=67.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++       +........  +|.           
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~-----------   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY-----------   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG-----------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH-----------
Confidence            34568999998 9999999999999998 9999999988765333222       122222211  121           


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      +.+..-|++|..+|......         ++   -.+.+..|..-    .+...+.+.+..+     ++.++++|--.
T Consensus        71 ~a~~~aDiVIiaag~p~k~G---------~~---R~dl~~~N~~i----~~~i~~~i~~~~p-----~a~iivvtNPv  127 (324)
T 3gvi_A           71 AAIEGADVVIVTAGVPRKPG---------MS---RDDLLGINLKV----MEQVGAGIKKYAP-----EAFVICITNPL  127 (324)
T ss_dssp             GGGTTCSEEEECCSCCCC-----------------CHHHHHHHHH----HHHHHHHHHHHCT-----TCEEEECCSSH
T ss_pred             HHHCCCCEEEEccCcCCCCC---------CC---HHHHHHhhHHH----HHHHHHHHHHHCC-----CeEEEecCCCc
Confidence            12236899999998643211         11   12234444433    4444444444331     57788777543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.94  E-value=0.0033  Score=53.58  Aligned_cols=77  Identities=14%  Similarity=0.226  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-C-CC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-G-KL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~-~i   79 (254)
                      .|.++||+|+ |++|...++.+...|+ +|+.++++.++++.+ ++++.  ..+  |..+.+.+.   +.+.+.. + ++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~i--~~~~~~~~~---~~~~~~~~g~g~  255 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-SDAGF--ETI--DLRNSAPLR---DQIDQILGKPEV  255 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HTTTC--EEE--ETTSSSCHH---HHHHHHHSSSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCC--cEE--cCCCcchHH---HHHHHHhCCCCC
Confidence            5789999997 9999999887777899 899999988776654 45554  333  443322111   2222222 2 69


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|.++|.
T Consensus       256 Dvvid~~g~  264 (398)
T 2dph_A          256 DCGVDAVGF  264 (398)
T ss_dssp             EEEEECSCT
T ss_pred             CEEEECCCC
Confidence            999999985

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.92  E-value=0.0019  Score=55.14  Aligned_cols=77  Identities=19%  Similarity=0.248  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      .|.++||.|+ |++|...++.+...|+ +|+++++++++++.+ ++++.  ..  .|.++.+.+   .+.+.+..  .++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~--i~~~~~~~~---~~~v~~~t~g~g~  255 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGF--EI--ADLSLDTPL---HEQIAALLGEPEV  255 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC--EE--EETTSSSCH---HHHHHHHHSSSCE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCC--cE--EccCCcchH---HHHHHHHhCCCCC
Confidence            5789999995 9999999887777899 788899987776655 55664  32  343332222   22233322  269


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|.++|.
T Consensus       256 Dvvid~~G~  264 (398)
T 1kol_A          256 DCAVDAVGF  264 (398)
T ss_dssp             EEEEECCCT
T ss_pred             CEEEECCCC
Confidence            999999985

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.91  E-value=0.0045  Score=52.04  Aligned_cols=85  Identities=14%  Similarity=0.170  Sum_probs=54.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------------CC-CceEEecCCCCHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------------GP-DVKFAPVDVTSEEDVQK   67 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------------~~-~~~~~~~Dls~~~~~~~   67 (254)
                      ||+.+++.|.| .|-+|..++..|++.|++|++.+|+++..+++.+.-            .. ...++-.-+.+. .+++
T Consensus        19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~   96 (358)
T 4e21_A           19 YFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDS   96 (358)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHH
T ss_pred             hhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHH
Confidence            67778899998 589999999999999999999999987766554320            01 113333333333 5666


Q ss_pred             HHHHHHHHcCCCcEEEeCCc
Q psy12833         68 AVLLCKDSFGKLDVNVNCAG   87 (254)
Q Consensus        68 ~~~~~~~~~~~id~li~~ag   87 (254)
                      +++++.....+=+++|.+..
T Consensus        97 vl~~l~~~l~~g~iiId~st  116 (358)
T 4e21_A           97 MLQRMTPLLAANDIVIDGGN  116 (358)
T ss_dssp             HHHHHGGGCCTTCEEEECSS
T ss_pred             HHHHHHhhCCCCCEEEeCCC
Confidence            66666555444456666554

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.91  E-value=0.0017  Score=54.54  Aligned_cols=77  Identities=22%  Similarity=0.295  Sum_probs=49.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch---hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc---
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE---GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF---   76 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~---   76 (254)
                      .|.++||+||+|++|...++.+...|++++++.++.+.   ..+..++++.... +  |   .++..  .+.+.+..   
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i--~---~~~~~--~~~~~~~~~~~  238 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV-I--T---EEELR--RPEMKNFFKDM  238 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE-E--E---HHHHH--SGGGGGTTSSS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE-E--e---cCcch--HHHHHHHHhCC
Confidence            57899999999999999988777789998877765443   2344456654322 2  2   11110  11222221   


Q ss_pred             CCCcEEEeCCc
Q psy12833         77 GKLDVNVNCAG   87 (254)
Q Consensus        77 ~~id~li~~ag   87 (254)
                      +++|++|.++|
T Consensus       239 ~~~Dvvid~~g  249 (357)
T 1zsy_A          239 PQPRLALNCVG  249 (357)
T ss_dssp             CCCSEEEESSC
T ss_pred             CCceEEEECCC
Confidence            25899999887

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.90  E-value=0.0028  Score=52.87  Aligned_cols=76  Identities=20%  Similarity=0.275  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      .|.+++|+|+ |++|...++.+... |++|+.+++++++.+.+ ++++.... +  |..+ +    +.+++.+..  .++
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~lGa~~~-i--~~~~-~----~~~~v~~~t~g~g~  240 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REVGADAA-V--KSGA-G----AADAIRELTGGQGA  240 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHTTCSEE-E--ECST-T----HHHHHHHHHGGGCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEE-E--cCCC-c----HHHHHHHHhCCCCC
Confidence            5789999998 99999888766666 78999999988776654 55654322 2  2222 2    223333322  279


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|.++|.
T Consensus       241 d~v~d~~G~  249 (345)
T 3jv7_A          241 TAVFDFVGA  249 (345)
T ss_dssp             EEEEESSCC
T ss_pred             eEEEECCCC
Confidence            999999873

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.90  E-value=0.00062  Score=54.75  Aligned_cols=68  Identities=25%  Similarity=0.346  Sum_probs=51.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++| +++|.|+ |++|++++..|.+.|++|++++|+.++.+++.++++..     .  .+.   .+    +    ...|+
T Consensus       115 l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-----~--~~~---~~----~----~~~Di  174 (263)
T 2d5c_A          115 LKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-----A--VPL---EK----A----REARL  174 (263)
T ss_dssp             CCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-----E--CCG---GG----G----GGCSE
T ss_pred             CCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-----h--hhH---hh----c----cCCCE
Confidence            457 8999997 78999999999999999999999988888877766532     1  121   11    1    26899


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|++....
T Consensus       175 vi~~tp~~  182 (263)
T 2d5c_A          175 LVNATRVG  182 (263)
T ss_dssp             EEECSSTT
T ss_pred             EEEccCCC
Confidence            99998753

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.90  E-value=0.0021  Score=51.57  Aligned_cols=40  Identities=10%  Similarity=0.126  Sum_probs=35.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG   41 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~   41 (254)
                      ++||+++|.|+|+-+|+.++..|..+|++|+++.|+...+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L  187 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDI  187 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccH
Confidence            5799999999999999999999999999999998764433

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.90  E-value=0.0054  Score=50.11  Aligned_cols=81  Identities=14%  Similarity=0.097  Sum_probs=62.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH----------hCCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE----------LGPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~----------~~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +++.|.|. |-+|..++..|++.|++|++.+|++++.+++.+.          .-. ..++..-+.++..++++++++..
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            46788875 8999999999999999999999999887766542          122 56666677778888888888877


Q ss_pred             HcCCCcEEEeCCc
Q psy12833         75 SFGKLDVNVNCAG   87 (254)
Q Consensus        75 ~~~~id~li~~ag   87 (254)
                      ...+-.++|++..
T Consensus        94 ~l~~g~ivv~~st  106 (296)
T 3qha_A           94 HAKPGTVIAIHST  106 (296)
T ss_dssp             TCCTTCEEEECSC
T ss_pred             hcCCCCEEEEeCC
Confidence            6555567777654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.89  E-value=0.015  Score=48.03  Aligned_cols=115  Identities=18%  Similarity=0.133  Sum_probs=69.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhC-------CCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELG-------PDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++.       ........+  |.           
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~-----------   68 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY-----------   68 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG-----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH-----------
Confidence            45578899995 9999999999999888 99999999887654443331       122222111  21           


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      +.+..-|++|..+|......         ++-.   +.+..|..-.    +...+.+.+..+     ++.++++|-..
T Consensus        69 ~a~~~aDvVIi~ag~p~k~G---------~~R~---dl~~~N~~i~----~~i~~~i~~~~p-----~a~vivvtNPv  125 (321)
T 3p7m_A           69 KDLENSDVVIVTAGVPRKPG---------MSRD---DLLGINIKVM----QTVGEGIKHNCP-----NAFVICITNPL  125 (321)
T ss_dssp             GGGTTCSEEEECCSCCCCTT---------CCHH---HHHHHHHHHH----HHHHHHHHHHCT-----TCEEEECCSSH
T ss_pred             HHHCCCCEEEEcCCcCCCCC---------CCHH---HHHHHhHHHH----HHHHHHHHHHCC-----CcEEEEecCch
Confidence            12236899999998643221         2322   3344454443    444444444331     56777776533

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.89  E-value=0.0049  Score=51.19  Aligned_cols=36  Identities=22%  Similarity=0.292  Sum_probs=31.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++++.
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            35789999998 8999999999999997 788888754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.81  E-value=0.0076  Score=49.92  Aligned_cols=113  Identities=14%  Similarity=0.108  Sum_probs=64.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhC------CCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELG------PDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~------~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      .++++.|+|+ |.+|.+++..|+..|.  +++++++++++++-...++.      ..+.....   +           .+
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~-----------~~   72 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---E-----------YS   72 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---C-----------GG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---c-----------HH
Confidence            3578999997 9999999999999887  89999998776664444331      12222221   1           12


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      .+...|++|+.+|.....            -+.-.+.++.|..-    .+...+.+.+..     +++.++++|--.
T Consensus        73 a~~~aDiVvi~ag~~~kp------------G~tR~dL~~~N~~I----~~~i~~~i~~~~-----p~a~ilvvtNPv  128 (326)
T 3vku_A           73 DAKDADLVVITAGAPQKP------------GETRLDLVNKNLKI----LKSIVDPIVDSG-----FNGIFLVAANPV  128 (326)
T ss_dssp             GGTTCSEEEECCCCC----------------------------C----HHHHHHHHHTTT-----CCSEEEECSSSH
T ss_pred             HhcCCCEEEECCCCCCCC------------CchHHHHHHHHHHH----HHHHHHHHHhcC-----CceEEEEccCch
Confidence            234789999999964221            11223344555433    444455555443     257788777543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.81  E-value=0.0016  Score=53.73  Aligned_cols=68  Identities=12%  Similarity=-0.001  Sum_probs=47.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.++||+|+ |++|...++.+...|++|+.++ ++++.+.+ ++++.... +  |  |   .++    +   .+++|++
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~lGa~~v-~--~--d---~~~----v---~~g~Dvv  203 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKRGVRHL-Y--R--E---PSQ----V---TQKYFAI  203 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHHTEEEE-E--S--S---GGG----C---CSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHcCCCEE-E--c--C---HHH----h---CCCccEE
Confidence            5789999999 9999999988778899999999 76666554 45654222 2  3  2   111    1   3479999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |.++|.
T Consensus       204 ~d~~g~  209 (315)
T 3goh_A          204 FDAVNS  209 (315)
T ss_dssp             ECC---
T ss_pred             EECCCc
Confidence            999874

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.77  E-value=0.00032  Score=58.43  Aligned_cols=115  Identities=20%  Similarity=0.141  Sum_probs=64.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--E-----EEEeeCCCc--hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG--R-----VVLCDLPTS--EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~--~-----v~~~~r~~~--~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      .++.||||+|.+|.+++..|+..|.  +     ++++++++.  .++-...++   ..... .....+  +...+.    
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~--~~~~~~----   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIAT--DKEEIA----   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEE--SCHHHH----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEc--CCcHHH----
Confidence            5799999999999999999998775  4     889998642  233222222   11111 111111  111222    


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCc-EEEEEecc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRG-VIINTASI  150 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~-~ii~vss~  150 (254)
                         +...|++|+.||......         ++   -.+.++.|......+    .+.+.+..+     ++ +++++|--
T Consensus        77 ---~~daDvVvitAg~prkpG---------~t---R~dll~~N~~i~~~i----~~~i~~~~~-----~~~~vivvsNP  131 (333)
T 5mdh_A           77 ---FKDLDVAILVGSMPRRDG---------ME---RKDLLKANVKIFKCQ----GAALDKYAK-----KSVKVIVVGNP  131 (333)
T ss_dssp             ---TTTCSEEEECCSCCCCTT---------CC---TTTTHHHHHHHHHHH----HHHHHHHSC-----TTCEEEECSSS
T ss_pred             ---hCCCCEEEEeCCCCCCCC---------CC---HHHHHHHHHHHHHHH----HHHHHHhCC-----CCeEEEEcCCc
Confidence               237899999998643211         11   223456666555444    444444431     35 47777653

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.74  E-value=0.0018  Score=53.91  Aligned_cols=71  Identities=15%  Similarity=0.084  Sum_probs=56.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      +.++|.|+ |.+|+.+++.|.++|. |++++++++..+ ..+   ..+.++..|.+|++.++++      ...+.|.+|.
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~---~~~~~i~gd~~~~~~L~~a------~i~~a~~vi~  183 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR---SGANFVHGDPTRVSDLEKA------NVRGARAVIV  183 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH---TTCEEEESCTTSHHHHHHT------CSTTEEEEEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh---CCcEEEEeCCCCHHHHHhc------ChhhccEEEE
Confidence            47999997 8999999999999999 999999988877 443   4678899999999877654      1125677776


Q ss_pred             CCc
Q psy12833         85 CAG   87 (254)
Q Consensus        85 ~ag   87 (254)
                      ..+
T Consensus       184 ~~~  186 (336)
T 1lnq_A          184 DLE  186 (336)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.72  E-value=0.0031  Score=50.91  Aligned_cols=40  Identities=20%  Similarity=0.266  Sum_probs=35.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG   41 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~   41 (254)
                      ++||+++|.|.|+-+|+.++..|..+|++|+++.++...+
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L  198 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDL  198 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCH
Confidence            5799999999999999999999999999999988765433

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.70  E-value=0.0017  Score=54.37  Aligned_cols=77  Identities=18%  Similarity=0.144  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC--CC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG--KL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--~i   79 (254)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+ ..++++... .  .|..+.+    +.+++.+..+  ++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~lGa~~-v--i~~~~~~----~~~~v~~~t~g~g~  236 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCD-IALEYGATD-I--INYKNGD----IVEQILKATDGKGV  236 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHH-HHHHHTCCE-E--ECGGGSC----HHHHHHHHTTTCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHhCCce-E--EcCCCcC----HHHHHHHHcCCCCC
Confidence            5789999996 8999999888778899 7999998876655 445565432 2  2332322    3334444332  69


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|.++|.
T Consensus       237 D~v~d~~g~  245 (352)
T 3fpc_A          237 DKVVIAGGD  245 (352)
T ss_dssp             EEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999998874

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.66  E-value=0.0032  Score=50.81  Aligned_cols=38  Identities=21%  Similarity=0.383  Sum_probs=34.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      ++||+++|.|+|+-+|+.++..|..+|++|+++.|+..
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~  196 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT  196 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence            57999999999999999999999999999999877543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.64  E-value=0.004  Score=50.69  Aligned_cols=38  Identities=21%  Similarity=0.335  Sum_probs=34.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      ++||+++|.|+|+-+|+.++..|..+|++|+++.|+..
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~  200 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS  200 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            57999999999999999999999999999999987543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.63  E-value=0.0021  Score=53.26  Aligned_cols=76  Identities=21%  Similarity=0.200  Sum_probs=50.6

Q ss_pred             Cc-EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          4 GV-VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         4 ~~-~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      |+ ++||+||+|++|...++.+...|++|+.+++++++.+.+ ++++.... +  |..+.+  .+.+.++  ..+++|++
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~v-~--~~~~~~--~~~~~~~--~~~~~d~v  221 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEV-I--SREDVY--DGTLKAL--SKQQWQGA  221 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEE-E--EHHHHC--SSCCCSS--CCCCEEEE
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEE-E--ECCCch--HHHHHHh--hcCCccEE
Confidence            44 799999999999999998888899999999988776655 45654321 1  211110  0001111  11368999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.|+|
T Consensus       222 id~~g  226 (330)
T 1tt7_A          222 VDPVG  226 (330)
T ss_dssp             EESCC
T ss_pred             EECCc
Confidence            99987

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.62  E-value=0.011  Score=47.97  Aligned_cols=80  Identities=6%  Similarity=0.101  Sum_probs=53.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC----------CceEEecCCCCHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP----------DVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~----------~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      .++.|.|++|.+|.+++..|.+.|++|++++|+++..+++.+ .+.          ...++-.-+ .+..+.++++++..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~aDvVi~av-~~~~~~~v~~~l~~   89 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-MGIPLTDGDGWIDEADVVVLAL-PDNIIEKVAEDIVP   89 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-TTCCCCCSSGGGGTCSEEEECS-CHHHHHHHHHHHGG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-cCCCcCCHHHHhcCCCEEEEcC-CchHHHHHHHHHHH
Confidence            479999999999999999999999999999998877666543 211          122222222 23446777766655


Q ss_pred             HcCCCcEEEeCC
Q psy12833         75 SFGKLDVNVNCA   86 (254)
Q Consensus        75 ~~~~id~li~~a   86 (254)
                      ...+=.++|++.
T Consensus        90 ~l~~~~ivv~~s  101 (286)
T 3c24_A           90 RVRPGTIVLILD  101 (286)
T ss_dssp             GSCTTCEEEESC
T ss_pred             hCCCCCEEEECC
Confidence            443333555543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.62  E-value=0.012  Score=48.78  Aligned_cols=114  Identities=11%  Similarity=-0.010  Sum_probs=69.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhC------CCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELG------PDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~------~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      ..+++.|+|+ |.+|.+++..|+.+|.  +|++.+++.++++-...++.      .....+..  +|.+           
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~-----------   83 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS-----------   83 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH-----------
Confidence            4568999998 9999999999999987  89999998776655444331      11122222  1211           


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      .+..-|++|.++|......         ++-   .+.++.|..=...+    .+.+.+..     +++.++++|--.
T Consensus        84 ~~~~aDiVvi~aG~~~kpG---------~tR---~dL~~~N~~I~~~i----~~~i~~~~-----p~a~vlvvtNPv  139 (331)
T 4aj2_A           84 VTANSKLVIITAGARQQEG---------ESR---LNLVQRNVNIFKFI----IPNVVKYS-----PQCKLLIVSNPV  139 (331)
T ss_dssp             GGTTEEEEEECCSCCCCTT---------CCG---GGGHHHHHHHHHHH----HHHHHHHC-----TTCEEEECSSSH
T ss_pred             HhCCCCEEEEccCCCCCCC---------ccH---HHHHHHHHHHHHHH----HHHHHHHC-----CCeEEEEecChH
Confidence            2237899999999753221         222   23455555433334    44444332     157788877643

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.61  E-value=0.0089  Score=53.35  Aligned_cols=36  Identities=22%  Similarity=0.292  Sum_probs=31.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++++.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            35689999999 8999999999999997 788888864

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.59  E-value=0.0033  Score=54.76  Aligned_cols=73  Identities=14%  Similarity=0.207  Sum_probs=59.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +++|.|+ |.+|+.+|+.|.++|+.|++++++++.++++.+++  .+..+..|-++++-++++=      ..+.|++|-.
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~--~~~~i~Gd~~~~~~L~~Ag------i~~ad~~ia~   75 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY--DLRVVNGHASHPDVLHEAG------AQDADMLVAV   75 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS--SCEEEESCTTCHHHHHHHT------TTTCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--CcEEEEEcCCCHHHHHhcC------CCcCCEEEEE
Confidence            6888888 79999999999999999999999999988887765  4678899999988665541      1267888765


Q ss_pred             Cc
Q psy12833         86 AG   87 (254)
Q Consensus        86 ag   87 (254)
                      .+
T Consensus        76 t~   77 (461)
T 4g65_A           76 TN   77 (461)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.58  E-value=0.0099  Score=48.19  Aligned_cols=82  Identities=12%  Similarity=0.056  Sum_probs=59.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----------CCCceEEecCCCCHHHHHHHH---HH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----------GPDVKFAPVDVTSEEDVQKAV---LL   71 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dls~~~~~~~~~---~~   71 (254)
                      +++.|.|. |.+|..++..|++.|++|++.+|++++.+++.+.-          -....++..-+.++..+++++   ++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            46888886 89999999999999999999999988877765421          012344555566677788877   66


Q ss_pred             HHHHcCCCcEEEeCCc
Q psy12833         72 CKDSFGKLDVNVNCAG   87 (254)
Q Consensus        72 ~~~~~~~id~li~~ag   87 (254)
                      +.....+-.++|++.+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6665545566777654

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.57  E-value=0.012  Score=49.06  Aligned_cols=78  Identities=15%  Similarity=0.240  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEE-EEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRV-VLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v-~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|++++|+|+ |++|...++.+...|+++ +++++++++++ ..++++....+-.-| .+..   +..+.+. .....|+
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~-~a~~lGa~~~i~~~~-~~~~---~~~~~~~-~~~g~d~  232 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLA-LAKSFGAMQTFNSSE-MSAP---QMQSVLR-ELRFNQL  232 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTTCSEEEETTT-SCHH---HHHHHHG-GGCSSEE
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHH-HHHHcCCeEEEeCCC-CCHH---HHHHhhc-ccCCccc
Confidence            5789999988 899999998888889865 56677666554 456666443322222 2222   2222222 2356899


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      ++.++|
T Consensus       233 v~d~~G  238 (346)
T 4a2c_A          233 ILETAG  238 (346)
T ss_dssp             EEECSC
T ss_pred             cccccc
Confidence            998887

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.57  E-value=0.011  Score=50.00  Aligned_cols=70  Identities=20%  Similarity=0.184  Sum_probs=52.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.+++++|.|+ |.+|+.+++.+.+.|++|++++.+.....   .+..  -.++..|..|.+.+.+++++       .|+
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~---~~~a--d~~~~~~~~d~~~l~~~~~~-------~dv   76 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC---RYVA--HEFIQAKYDDEKALNQLGQK-------CDV   76 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT---GGGS--SEEEECCTTCHHHHHHHHHH-------CSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh---hhhC--CEEEECCCCCHHHHHHHHHh-------CCc
Confidence            56899999997 78999999999999999999987654211   1111  13567899999988888763       677


Q ss_pred             EEe
Q psy12833         82 NVN   84 (254)
Q Consensus        82 li~   84 (254)
                      ++.
T Consensus        77 i~~   79 (377)
T 3orq_A           77 ITY   79 (377)
T ss_dssp             EEE
T ss_pred             cee
Confidence            643

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.55  E-value=0.0056  Score=54.55  Aligned_cols=34  Identities=21%  Similarity=0.258  Sum_probs=29.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLP   37 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~   37 (254)
                      ++++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus       326 ~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          326 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999998 8999999999999997 78888665

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.49  E-value=0.0043  Score=52.22  Aligned_cols=47  Identities=26%  Similarity=0.409  Sum_probs=41.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG   49 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   49 (254)
                      ++||+++|.|. |.+|..+++.|.+.|++|++.+++.+++++..++++
T Consensus       171 L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g  217 (364)
T 1leh_A          171 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG  217 (364)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC
Confidence            57999999997 889999999999999999999999888887777654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.46  E-value=0.0037  Score=52.21  Aligned_cols=102  Identities=22%  Similarity=0.242  Sum_probs=59.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCCCc--hhHHHHHHh---CCC--ceEEecCCCCHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-------RVVLCDLPTS--EGESVAKEL---GPD--VKFAPVDVTSEEDVQKA   68 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~---~~~--~~~~~~Dls~~~~~~~~   68 (254)
                      +.-+|.|+||+|+||..++..|+....       ++.+.+.++.  .++-..-++   ...  ...+..  +|.   .+ 
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~---~~-   96 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP---RV-   96 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH---HH-
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh---HH-
Confidence            445899999999999999999887543       6888888653  222222222   111  111222  122   12 


Q ss_pred             HHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q psy12833         69 VLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHE  132 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  132 (254)
                            .+..-|++|..||....+.         ++-++   .++.|..    +.+...+.+.+
T Consensus        97 ------a~~~advVvi~aG~prkpG---------mtR~D---Ll~~Na~----I~~~~~~~i~~  138 (345)
T 4h7p_A           97 ------AFDGVAIAIMCGAFPRKAG---------MERKD---LLEMNAR----IFKEQGEAIAA  138 (345)
T ss_dssp             ------HTTTCSEEEECCCCCCCTT---------CCHHH---HHHHHHH----HHHHHHHHHHH
T ss_pred             ------HhCCCCEEEECCCCCCCCC---------CCHHH---HHHHhHH----HHHHHHHHHHh
Confidence                  2347899999999754322         34333   4555553    34455555554

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.44  E-value=0.0039  Score=52.33  Aligned_cols=36  Identities=19%  Similarity=0.295  Sum_probs=31.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTS   39 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~   39 (254)
                      ++++|+|.|+ ||+|.++++.|+..|. ++.+++++.-
T Consensus       117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~V  153 (353)
T 3h5n_A          117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQI  153 (353)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence            4689999998 8999999999999997 7889988753

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.43  E-value=0.073  Score=43.35  Aligned_cols=111  Identities=14%  Similarity=0.063  Sum_probs=67.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.+++++.++....++       .........  +|.    +.       +
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a-------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SL-------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GG-------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCH----HH-------h
Confidence            5889999 9999999999999997  8999999887654222111       122222222  121    12       2


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                      ..-|++|..+|......         ++-.   +.+..|.    .+.+...+.+.+..     +++.++++|--.
T Consensus        68 ~~aDiVViaag~~~kpG---------~~R~---dl~~~N~----~i~~~i~~~i~~~~-----p~a~iivvsNPv  121 (294)
T 1oju_A           68 KGSEIIVVTAGLARKPG---------MTRL---DLAHKNA----GIIKDIAKKIVENA-----PESKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCCCSS---------CCHH---HHHHHHH----HHHHHHHHHHHTTS-----TTCEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCCC---------CcHH---HHHHHHH----HHHHHHHHHHHhhC-----CCeEEEEeCCcc
Confidence            36899999998643211         2322   2344553    34455555555543     257788777543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.42  E-value=0.0065  Score=49.10  Aligned_cols=44  Identities=14%  Similarity=0.149  Sum_probs=37.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA   45 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~   45 (254)
                      ++||+++|.|+|.-+|+-+++.|..+|++|+++.++...+++..
T Consensus       157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~  200 (288)
T 1b0a_A          157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV  200 (288)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHh
Confidence            57999999999999999999999999999999987765544433

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.40  E-value=0.019  Score=49.27  Aligned_cols=70  Identities=16%  Similarity=0.117  Sum_probs=53.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+.....   .+..+  .++..|..|.+.+.++++       ++|+
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~---~~~ad--~~~~~~~~d~~~l~~~a~-------~~D~   99 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPA---GAVAD--RHLRAAYDDEAALAELAG-------LCEA   99 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHH---HHHSS--EEECCCTTCHHHHHHHHH-------HCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCch---hhhCC--EEEECCcCCHHHHHHHHh-------cCCE
Confidence            57899999987 57999999999999999999887544321   11112  356689999998888884       5898


Q ss_pred             EEe
Q psy12833         82 NVN   84 (254)
Q Consensus        82 li~   84 (254)
                      ++.
T Consensus       100 V~~  102 (419)
T 4e4t_A          100 VST  102 (419)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            874

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.36  E-value=0.0065  Score=49.41  Aligned_cols=40  Identities=18%  Similarity=0.291  Sum_probs=35.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG   41 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~   41 (254)
                      ++||+++|.|+|.-+|+-+++.|..+|++|+++.++...+
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L  202 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL  202 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccH
Confidence            5799999999999999999999999999999998765443

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.33  E-value=0.0044  Score=48.16  Aligned_cols=64  Identities=13%  Similarity=0.098  Sum_probs=45.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      +++.|+| .|.+|.++++.|.+.|++|++++|+.+..+++.++   .+...     +   ..++       ....|++|.
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~---g~~~~-----~---~~~~-------~~~~DvVi~   89 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS---AAQVT-----F---QEEA-------VSSPEVIFV   89 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT---TSEEE-----E---HHHH-------TTSCSEEEE
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc---CCcee-----c---HHHH-------HhCCCEEEE
Confidence            4688998 79999999999999999999999987766554321   23321     1   1122       236899998


Q ss_pred             CCc
Q psy12833         85 CAG   87 (254)
Q Consensus        85 ~ag   87 (254)
                      +..
T Consensus        90 av~   92 (215)
T 2vns_A           90 AVF   92 (215)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            865

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.33  E-value=0.018  Score=47.53  Aligned_cols=82  Identities=12%  Similarity=0.102  Sum_probs=59.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH----------hCCCceEEecCCCCHHHHHHHHH--HH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE----------LGPDVKFAPVDVTSEEDVQKAVL--LC   72 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~----------~~~~~~~~~~Dls~~~~~~~~~~--~~   72 (254)
                      +++.|.|. |.+|..+++.|++.|++|++.+|++++.+++.++          .-....++..-+.+...++.++.  .+
T Consensus        32 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~  110 (320)
T 4dll_A           32 RKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGV  110 (320)
T ss_dssp             SEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCH
T ss_pred             CEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhH
Confidence            47888876 8999999999999999999999998877766532          11234455555667777777776  56


Q ss_pred             HHHcCCCcEEEeCCc
Q psy12833         73 KDSFGKLDVNVNCAG   87 (254)
Q Consensus        73 ~~~~~~id~li~~ag   87 (254)
                      .....+-.++|++..
T Consensus       111 ~~~l~~~~~vi~~st  125 (320)
T 4dll_A          111 AAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHHCCTTCEEEECSC
T ss_pred             HhhCCCCCEEEecCC
Confidence            655555567776654

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.33  E-value=0.018  Score=49.20  Aligned_cols=71  Identities=21%  Similarity=0.200  Sum_probs=54.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ||.+++++|.|+ |.+|+.+++.+.+.|++|++++ +... ..    +..+....+..|..|.+.+.++++       ..
T Consensus        21 mm~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~----~~ad~~~~~~~~~~d~~~l~~~a~-------~~   87 (403)
T 3k5i_A           21 MWNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAK----QISAHDGHVTGSFKEREAVRQLAK-------TC   87 (403)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTG----GGCCSSCCEESCTTCHHHHHHHHT-------TC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHH----HhccccceeecCCCCHHHHHHHHH-------hC
Confidence            778999999998 5799999999999999999988 4322 22    122223467789999998888876       46


Q ss_pred             cEEEe
Q psy12833         80 DVNVN   84 (254)
Q Consensus        80 d~li~   84 (254)
                      |+++.
T Consensus        88 d~i~~   92 (403)
T 3k5i_A           88 DVVTA   92 (403)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            77764

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.33  E-value=0.018  Score=45.98  Aligned_cols=82  Identities=16%  Similarity=0.194  Sum_probs=58.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhHHHHHHhC-----------CCceEEecCCCCHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKELG-----------PDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~-----------~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      .++.|.|+ |.+|..++..|.+.|++ |.+++|+++..+++.++++           .....+-.-+ ....+.++++++
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v~~~l   88 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAELLQGI   88 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHHHHHH
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHHHHHH
Confidence            46889997 99999999999999998 8899999888777766532           1223333333 344678888877


Q ss_pred             HHHcCCCcEEEeCCcc
Q psy12833         73 KDSFGKLDVNVNCAGI   88 (254)
Q Consensus        73 ~~~~~~id~li~~ag~   88 (254)
                      .....+=.++|++.+.
T Consensus        89 ~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           89 VEGKREEALMVHTAGS  104 (266)
T ss_dssp             HTTCCTTCEEEECCTT
T ss_pred             HhhcCCCcEEEECCCC
Confidence            6654444567777654

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.32  E-value=0.004  Score=50.27  Aligned_cols=68  Identities=22%  Similarity=0.290  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .+++++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.++++.  .+. .++          .     ....|+
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~--~~~-~~~----------~-----~~~~Di  178 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY--AYI-NSL----------E-----NQQADI  178 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC--EEE-SCC----------T-----TCCCSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC--ccc-hhh----------h-----cccCCE
Confidence            4678999996 8999999999999997 799999999998888877643  111 111          0     136899


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|++....
T Consensus       179 vInaTp~g  186 (271)
T 1npy_A          179 LVNVTSIG  186 (271)
T ss_dssp             EEECSSTT
T ss_pred             EEECCCCC
Confidence            99987654

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.32  E-value=0.012  Score=50.57  Aligned_cols=40  Identities=25%  Similarity=0.458  Sum_probs=35.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG   41 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~   41 (254)
                      ++.||+++|.|. |.||+.+++.+...|++|+++++++...
T Consensus       244 ~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a  283 (464)
T 3n58_A          244 MMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICA  283 (464)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             cccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence            478999999996 6799999999999999999998876543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.29  E-value=0.01  Score=49.49  Aligned_cols=76  Identities=24%  Similarity=0.361  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC--CC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG--KL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--~i   79 (254)
                      .|.++||+|+ +++|...+..+.+. |++|+.+++++++++. ..+++....+   |..+.+.    .+++.+..+  .+
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~-~~~~Ga~~~i---~~~~~~~----~~~v~~~t~g~g~  233 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL-AKKIGADVTI---NSGDVNP----VDEIKKITGGLGV  233 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH-HHHTTCSEEE---EC-CCCH----HHHHHHHTTSSCE
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh-hhhcCCeEEE---eCCCCCH----HHHhhhhcCCCCc
Confidence            5789999988 77777777777655 7899999998877554 4455543322   3333332    233444332  57


Q ss_pred             cEEEeCCc
Q psy12833         80 DVNVNCAG   87 (254)
Q Consensus        80 d~li~~ag   87 (254)
                      |.++.+++
T Consensus       234 d~~~~~~~  241 (348)
T 4eez_A          234 QSAIVCAV  241 (348)
T ss_dssp             EEEEECCS
T ss_pred             eEEEEecc
Confidence            88888776

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.28  E-value=0.038  Score=42.56  Aligned_cols=74  Identities=11%  Similarity=0.067  Sum_probs=51.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ..+++.|.| .|.+|.+++..|++.|++|++.+|+++.       + .+..++-.-+. ...++++++++..... -.++
T Consensus        18 ~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~~-------~-~~aD~vi~av~-~~~~~~v~~~l~~~~~-~~~v   86 (209)
T 2raf_A           18 QGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQA-------T-TLGEIVIMAVP-YPALAALAKQYATQLK-GKIV   86 (209)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCCC-------S-SCCSEEEECSC-HHHHHHHHHHTHHHHT-TSEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHH-------h-ccCCEEEEcCC-cHHHHHHHHHHHHhcC-CCEE
Confidence            456899999 5999999999999999999999998661       1 22333433343 6778888888766554 3455


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.+..
T Consensus        87 i~~~~   91 (209)
T 2raf_A           87 VDITN   91 (209)
T ss_dssp             EECCC
T ss_pred             EEECC
Confidence            65543

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.27  E-value=0.0095  Score=47.19  Aligned_cols=43  Identities=14%  Similarity=0.229  Sum_probs=37.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC----EEEEeeCCCchhHHHHHHh
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG----RVVLCDLPTSEGESVAKEL   48 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~----~v~~~~r~~~~~~~~~~~~   48 (254)
                      +++.|.| .|.+|.++++.|.+.|+    +|++.+|++++.+++.++.
T Consensus         3 ~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~   49 (247)
T 3gt0_A            3 KQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY   49 (247)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh
Confidence            4677887 58999999999999998    9999999998888876654

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.27  E-value=0.093  Score=43.30  Aligned_cols=76  Identities=21%  Similarity=0.213  Sum_probs=51.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |...+++.|+|| |.+|..++..|+..|. +|++.++++++++.....+       .........  +|.          
T Consensus         1 m~~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~----------   67 (322)
T 1t2d_A            1 MAPKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTY----------   67 (322)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCG----------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CCH----------
Confidence            444568999998 9999999999999998 8999999988766443332       112222211  121          


Q ss_pred             HHHcCCCcEEEeCCccCC
Q psy12833         73 KDSFGKLDVNVNCAGISC   90 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~   90 (254)
                       +.+...|++|..+|...
T Consensus        68 -~al~~aD~Vi~a~g~p~   84 (322)
T 1t2d_A           68 -DDLAGADVVIVTAGFTK   84 (322)
T ss_dssp             -GGGTTCSEEEECCSCSS
T ss_pred             -HHhCCCCEEEEeCCCCC
Confidence             11237899999998643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.26  E-value=0.0033  Score=58.55  Aligned_cols=76  Identities=21%  Similarity=0.199  Sum_probs=50.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC--CCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG--KLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--~id   80 (254)
                      +|.++||.||+||+|.+.++.....|++|+.++++. +.+.+ + ++... .+  |..+.+    +.+.+.+..+  ++|
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~-lga~~-v~--~~~~~~----~~~~i~~~t~g~GvD  414 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E-LSREH-LA--SSRTCD----FEQQFLGATGGRGVD  414 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C-SCGGG-EE--CSSSST----HHHHHHHHSCSSCCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h-cChhh-ee--ecCChh----HHHHHHHHcCCCCeE
Confidence            578999999999999999988778899999988754 32221 1 32221 12  333322    3344444432  699


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      +++++.|.
T Consensus       415 vVld~~gg  422 (795)
T 3slk_A          415 VVLNSLAG  422 (795)
T ss_dssp             EEEECCCT
T ss_pred             EEEECCCc
Confidence            99998763

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.25  E-value=0.023  Score=48.18  Aligned_cols=70  Identities=16%  Similarity=0.094  Sum_probs=51.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +.||+++|.|++ .+|+.+++.+.+.|++|++++.+.....   ...  --..+..|..|.+.+.++++       ..|+
T Consensus        12 ~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~~~~~---~~~--ad~~~~~~~~d~~~l~~~~~-------~~dv   78 (389)
T 3q2o_A           12 LPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTKNSPC---AQV--ADIEIVASYDDLKAIQHLAE-------ISDV   78 (389)
T ss_dssp             CTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSTTCTT---TTT--CSEEEECCTTCHHHHHHHHH-------TCSE
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCCCch---HHh--CCceEecCcCCHHHHHHHHH-------hCCE
Confidence            578999999974 6999999999999999999987643211   001  11345678889888888776       4677


Q ss_pred             EEe
Q psy12833         82 NVN   84 (254)
Q Consensus        82 li~   84 (254)
                      +..
T Consensus        79 I~~   81 (389)
T 3q2o_A           79 VTY   81 (389)
T ss_dssp             EEE
T ss_pred             eee
Confidence            643

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.25  E-value=0.02  Score=49.04  Aligned_cols=41  Identities=20%  Similarity=0.227  Sum_probs=35.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE   42 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~   42 (254)
                      ++.||+++|.|. |.||+.+++.|...|++|+++++++....
T Consensus       217 ~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~  257 (435)
T 3gvp_A          217 MFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICAL  257 (435)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             eecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhH
Confidence            468999999998 67999999999999999999998865443

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.25  E-value=0.051  Score=44.76  Aligned_cols=144  Identities=15%  Similarity=0.188  Sum_probs=80.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |+..++.|+|+ |.+|..++..|+.+|.  +|++.++++++++....++       +.++.... |  +           
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~-----------   68 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E-----------   68 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C-----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C-----------
Confidence            44568999999 9999999999998884  8999999876555332222       12233322 2  2           


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      .+.+..-|++|..+|......         .+-.   ..+..|..    ..+.+.+.+.+..     +++.++++|--..
T Consensus        69 ~~a~~~aDvVvi~ag~~~~~g---------~~r~---dl~~~n~~----i~~~i~~~i~~~~-----p~a~viv~tNPv~  127 (317)
T 3d0o_A           69 YSDCHDADLVVICAGAAQKPG---------ETRL---DLVSKNLK----IFKSIVGEVMASK-----FDGIFLVATNPVD  127 (317)
T ss_dssp             GGGGTTCSEEEECCCCCCCTT---------CCHH---HHHHHHHH----HHHHHHHHHHHTT-----CCSEEEECSSSHH
T ss_pred             HHHhCCCCEEEECCCCCCCCC---------CcHH---HHHHHHHH----HHHHHHHHHHHhC-----CCcEEEEecCcHH
Confidence            112337899999998743221         2222   23344433    3444455555443     1567777654332


Q ss_pred             c--------cCCCCCccchh-chHHHHHhHHHHHHHhc
Q psy12833        153 Y--------EGQSGQVAYSA-SKSGIVGMTLPMARDLA  181 (254)
Q Consensus       153 ~--------~~~~~~~~Y~~-sK~a~~~~~~~la~e~~  181 (254)
                      .        .++|.....+. +-.-...+...+++.+.
T Consensus       128 ~~t~~~~k~~~~p~~rviG~gt~lD~~r~~~~la~~l~  165 (317)
T 3d0o_A          128 ILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFD  165 (317)
T ss_dssp             HHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCHHHEEecCccccHHHHHHHHHHHhC
Confidence            2        12343334444 22223455556666663

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.25  E-value=0.073  Score=44.04  Aligned_cols=72  Identities=18%  Similarity=0.074  Sum_probs=49.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh------CCCceEE-ecCCCCHHHHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL------GPDVKFA-PVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~------~~~~~~~-~~Dls~~~~~~~~~~~~~~   74 (254)
                      .+++.|+|+ |.+|..++..|+..|.  +|++.+++++.++....++      ....... ..|..+             
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------------   86 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------------   86 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------------
Confidence            468999999 9999999999999997  8999999877655443332      1111222 123221             


Q ss_pred             HcCCCcEEEeCCccCC
Q psy12833         75 SFGKLDVNVNCAGISC   90 (254)
Q Consensus        75 ~~~~id~li~~ag~~~   90 (254)
                       +..-|++|..+|...
T Consensus        87 -~~daDiVIitaG~p~  101 (330)
T 3ldh_A           87 -SAGSKLVVITAGARQ  101 (330)
T ss_dssp             -CSSCSEEEECCSCCC
T ss_pred             -hCCCCEEEEeCCCCC
Confidence             237899999999753

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.22  E-value=0.089  Score=43.24  Aligned_cols=43  Identities=19%  Similarity=0.193  Sum_probs=37.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESV   44 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~   44 (254)
                      |-+.+++.|+|+ |.+|.+++..|++.|. +|++.+++++.++..
T Consensus         1 M~~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            1 MIERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            445568999998 9999999999999998 999999998776653

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.17  E-value=0.089  Score=42.30  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=56.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCEEEE-eeCCCc---------------------hhHHHHHHhCCCceEEecCCCC
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE-GGRVVL-CDLPTS---------------------EGESVAKELGPDVKFAPVDVTS   61 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~-g~~v~~-~~r~~~---------------------~~~~~~~~~~~~~~~~~~Dls~   61 (254)
                      -++.|+|++|.+|+.+++.+.++ +.+++. ++|+.+                     +++++.++    +. +..|+|.
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~----~D-VVIDfT~   82 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE----AD-YLIDFTL   82 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH----CS-EEEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC----CC-EEEEcCC
Confidence            47999999999999999998865 567665 577532                     12222221    11 4578899


Q ss_pred             HHHHHHHHHHHHHHcCCCcEEEeCCcc
Q psy12833         62 EEDVQKAVLLCKDSFGKLDVNVNCAGI   88 (254)
Q Consensus        62 ~~~~~~~~~~~~~~~~~id~li~~ag~   88 (254)
                      ++...+.+..+.+.  ++++++-+.|.
T Consensus        83 p~a~~~~~~~al~~--G~~vVigTTG~  107 (272)
T 4f3y_A           83 PEGTLVHLDAALRH--DVKLVIGTTGF  107 (272)
T ss_dssp             HHHHHHHHHHHHHH--TCEEEECCCCC
T ss_pred             HHHHHHHHHHHHHc--CCCEEEECCCC
Confidence            99999988888887  78888877773

>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}

Probab=96.14  E-value=0.017  Score=49.06  Aligned_cols=75  Identities=16%  Similarity=0.240  Sum_probs=51.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ||+.+++||+|++. ++..+++.+.+.|+++++++.........  +..+  .++.+|..|.+.+.+++++.     ++|
T Consensus         4 m~~~~~ilI~g~g~-~~~~~~~a~~~~G~~~v~v~~~~~~~~~~--~~ad--~~~~~~~~d~~~l~~~~~~~-----~~d   73 (403)
T 4dim_A            4 MYDNKRLLILGAGR-GQLGLYKAAKELGIHTIAGTMPNAHKPCL--NLAD--EISYMDISNPDEVEQKVKDL-----NLD   73 (403)
T ss_dssp             --CCCEEEEECCCG-GGHHHHHHHHHHTCEEEEEECSSCCHHHH--HHCS--EEEECCTTCHHHHHHHTTTS-----CCS
T ss_pred             ccCCCEEEEECCcH-hHHHHHHHHHHCCCEEEEEcCCCCCCcch--hhCC--eEEEecCCCHHHHHHHHHHc-----CCC
Confidence            78889999999965 68899999999999999887633222211  1222  35677888887776665432     789


Q ss_pred             EEEeC
Q psy12833         81 VNVNC   85 (254)
Q Consensus        81 ~li~~   85 (254)
                      .++..
T Consensus        74 ~v~~~   78 (403)
T 4dim_A           74 GAATC   78 (403)
T ss_dssp             EEECC
T ss_pred             EEEeC
Confidence            88753

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.14  E-value=0.071  Score=43.85  Aligned_cols=141  Identities=18%  Similarity=0.164  Sum_probs=78.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.++++++++-...++       ..+......|  +.           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HHh
Confidence            5889997 9999999999999887  8999999987655333222       2223322222  11           223


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc---
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY---  153 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~---  153 (254)
                      ..-|++|.++|......         +   .-.+.+..|..    +.+...+.+.+..     +++.++++|--...   
T Consensus        68 ~~aDvVii~ag~~~kpG---------~---~R~dl~~~N~~----i~~~i~~~i~~~~-----p~a~vivvtNPvd~~t~  126 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG---------M---SRDDLLAKNTE----IVGGVTEQFVEGS-----PDSTIIVVANPLDVMTY  126 (314)
T ss_dssp             TTCSEEEECCCC-------------------CHHHHHHHHH----HHHHHHHHHHTTC-----TTCEEEECCSSHHHHHH
T ss_pred             CCCCEEEECCCCCCCCC---------C---CHHHHHHhhHH----HHHHHHHHHHHhC-----CCcEEEecCCchhHHHH
Confidence            47899999998643211         1   12234455543    3445555555443     25778877754322   


Q ss_pred             -----cCCCCCccchhchH-HHHHhHHHHHHHhc
Q psy12833        154 -----EGQSGQVAYSASKS-GIVGMTLPMARDLA  181 (254)
Q Consensus       154 -----~~~~~~~~Y~~sK~-a~~~~~~~la~e~~  181 (254)
                           .++|.....+..-. =...+...+++.+.
T Consensus       127 ~~~k~~g~p~~rviG~~t~LD~~R~~~~la~~lg  160 (314)
T 3nep_X          127 VAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELD  160 (314)
T ss_dssp             HHHHHHTCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhcCCChHHEEeecCchHHHHHHHHHHHHhC
Confidence                 12333334444422 13445555666653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.14  E-value=0.077  Score=43.53  Aligned_cols=71  Identities=20%  Similarity=0.175  Sum_probs=48.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCC-------CceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGP-------DVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++.|+|+ |.+|..++..|+..|. +|++.++++++++....++..       .......  +|.           +.+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~-----------~a~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNY-----------ADT   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCH-----------HHH
Confidence            47999999 9999999999999996 899999998776654433311       2222211  121           112


Q ss_pred             CCCcEEEeCCccC
Q psy12833         77 GKLDVNVNCAGIS   89 (254)
Q Consensus        77 ~~id~li~~ag~~   89 (254)
                      ...|++|.++|..
T Consensus        69 ~~aD~Vi~a~g~p   81 (309)
T 1ur5_A           69 ANSDVIVVTSGAP   81 (309)
T ss_dssp             TTCSEEEECCCC-
T ss_pred             CCCCEEEEcCCCC
Confidence            3689999999864

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=96.09  E-value=0.044  Score=47.69  Aligned_cols=150  Identities=16%  Similarity=0.163  Sum_probs=83.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-----CCEEEEeeCCCchhHHHHH-------HhCCCceEEecCCCCHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVRE-----GGRVVLCDLPTSEGESVAK-------ELGPDVKFAPVDVTSEEDVQKAV   69 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~-----g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~~   69 (254)
                      |+..++.|.||++..|.+++..|+++     +.+|++.++++++++...+       ..+....+...  +|.   ++.+
T Consensus        26 m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t--~D~---~eal  100 (472)
T 1u8x_X           26 KKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EEAF  100 (472)
T ss_dssp             CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HHHH
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE--CCH---HHHH
Confidence            45568999999888888899889988     5689999999876655332       11223333222  232   2233


Q ss_pred             HHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHH----------------hHHHHHHHHHHHHHHHhc
Q psy12833         70 LLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN----------------TVGTFNVARLSAQLIHEN  133 (254)
Q Consensus        70 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n----------------~~~~~~l~~~~~~~~~~~  133 (254)
                      +       .-|+||..++......            ....+.+..+                ..-.+-.++.+.+.+.+.
T Consensus       101 ~-------~AD~VViaag~~~~~g------------~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~  161 (472)
T 1u8x_X          101 T-------DVDFVMAHIRVGKYAM------------RALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY  161 (472)
T ss_dssp             S-------SCSEEEECCCTTHHHH------------HHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-------CCCEEEEcCCCccccc------------cchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHH
Confidence            3       6899999998643211            0111111111                222333455555666655


Q ss_pred             cCCCCCCCcEEEEEecccccc------CCCCCccchhchHHHHHhHHHHHHHhc
Q psy12833        134 KLNEDGLRGVIINTASIAAYE------GQSGQVAYSASKSGIVGMTLPMARDLA  181 (254)
Q Consensus       134 ~~~~~~~~~~ii~vss~~~~~------~~~~~~~Y~~sK~a~~~~~~~la~e~~  181 (254)
                      .+     +..++++|--.+..      -.|.....+..-. +..+.+.+++.+.
T Consensus       162 ~P-----~A~ii~~TNPvdi~T~~~~k~~p~~rViG~c~~-~~r~~~~la~~lg  209 (472)
T 1u8x_X          162 SP-----DAWMLNYSNPAAIVAEATRRLRPNSKILNICDM-PVGIEDRMAQILG  209 (472)
T ss_dssp             CT-----TCEEEECCSCHHHHHHHHHHHSTTCCEEECCSH-HHHHHHHHHHHHT
T ss_pred             CC-----CeEEEEeCCcHHHHHHHHHHhCCCCCEEEeCCc-HHHHHHHHHHHhC
Confidence            42     57777777654432      1132233444333 4567777777775

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=96.09  E-value=0.037  Score=46.47  Aligned_cols=36  Identities=28%  Similarity=0.385  Sum_probs=24.4

Q ss_pred             CCCcEEEEeCCCChH---HHHHHHHHHHcCCEEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGL---GKATVERIVREGGRVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~gi---G~a~a~~l~~~g~~v~~~~r~   37 (254)
                      |+.|.++.+|||+|-   +.+++++|.++|++|..++..
T Consensus         1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~   39 (365)
T 3s2u_A            1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTP   39 (365)
T ss_dssp             --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence            454555445556543   678999999999999876653

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.05  E-value=0.053  Score=44.68  Aligned_cols=147  Identities=13%  Similarity=0.092  Sum_probs=77.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCceE-EecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKF-APVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ..++.|+|+ |.+|..++..|+..|.  +|++.+.++++++....++.....+ ..+.+..        .. .+.+..-|
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--------~~-~~a~~~aD   76 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA--------GD-YSDVKDCD   76 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----------C-GGGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE--------CC-HHHhCCCC
Confidence            357999998 9999999999999987  8999999987766545554332110 0111110        00 12234789


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-------
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-------  153 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-------  153 (254)
                      ++|.++|......         .+-   .+.+..|..-...+++.+.+.   .+      ++.++++|--...       
T Consensus        77 vVii~~g~p~k~g---------~~r---~dl~~~n~~i~~~i~~~i~~~---~p------~a~viv~tNPv~~~~~~~~k  135 (318)
T 1y6j_A           77 VIVVTAGANRKPG---------ETR---LDLAKKNVMIAKEVTQNIMKY---YN------HGVILVVSNPVDIITYMIQK  135 (318)
T ss_dssp             EEEECCCC---------------CH---HHHHHHHHHHHHHHHHHHHHH---CC------SCEEEECSSSHHHHHHHHHH
T ss_pred             EEEEcCCCCCCCC---------cCH---HHHHHhhHHHHHHHHHHHHHh---CC------CcEEEEecCcHHHHHHHHHH
Confidence            9999998642111         222   233555555444444444433   12      5677776543322       


Q ss_pred             -cCCCCCccchh-chHHHHHhHHHHHHHhc
Q psy12833        154 -EGQSGQVAYSA-SKSGIVGMTLPMARDLA  181 (254)
Q Consensus       154 -~~~~~~~~Y~~-sK~a~~~~~~~la~e~~  181 (254)
                       .++|.....+. +-.-...+...+++.+.
T Consensus       136 ~s~~p~~rviG~gt~Ld~~r~~~~la~~lg  165 (318)
T 1y6j_A          136 WSGLPVGKVIGSGTVLDSIRFRYLLSEKLG  165 (318)
T ss_dssp             HHTCCTTTEEECTTHHHHHHHHHHHHTTTT
T ss_pred             HcCCCHHHEeccCCchHHHHHHHHHHHHhC
Confidence             12343334444 33333455556666553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	254
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-59
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	5e-57
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-55
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-55
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-54
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-53
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-53
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	5e-53
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	9e-53
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-52
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-51
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	6e-51
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-51
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	9e-51
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	9e-50
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-49
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-49
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-49
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-49
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	7e-49
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-48
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-48
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-48
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	8e-47
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-46
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-46
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-46
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	7e-46
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	8e-46
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-44
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-44
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-44
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	4e-44
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	8e-44
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-43
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-43
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-43
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-42
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-42
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-41
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	5e-41
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-40
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-40
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	6e-40
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	4e-39
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-38
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	8e-38
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-38
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-37
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-36
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-36
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-35
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-35
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	9e-33
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-32
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-31
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	3e-31
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-30
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-29
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-27
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	9e-26
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	7e-25
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-20
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-15
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-13
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-11
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-10
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-08
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-07
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-07
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-05
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-05
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-05
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	9e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	3e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-04
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	7e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	0.001
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	0.001
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.002

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  185 bits (472), Expect = 4e-59
 Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 24/259 (9%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
           +  G   LVTGGA G+G+A  +   REG  V LCDL   EG+ VA+ +G    F  VD+ 
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVAEAIG--GAFFQVDLE 58

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
            E +  + V     + G++DV VN A I+               L +++R+L VN     
Sbjct: 59  DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTV------RLPEWRRVLEVNLTAPM 112

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
           +++ L+A+ + +           I+N AS+     +    AY+ASK G+V +T  +A DL
Sbjct: 113 HLSALAAREMRKVGGGA------IVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDL 166

Query: 181 AGAGIRVNTIAPGLFDTPLL------SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
           A   IRVN +APG   T  +      S   E+ R          +RLG P+E A+ V  +
Sbjct: 167 APLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFL 225

Query: 235 ITN--PLINGEVIRIDGAL 251
            +     I G ++ +DG +
Sbjct: 226 ASEKASFITGAILPVDGGM 244

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (457), Expect = 5e-57
 Identities = 155/246 (63%), Positives = 189/246 (76%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           +KG+V ++TGGASGLG AT ER+V +G   VL DLP S GE+ AK+LG +  FAP DVTS
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+DVQ A+ L K  FG++DV VNCAGI+ A K +N  KG  H+L+DF+R+L VN +GTFN
Sbjct: 63  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 122

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V RL A  + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 123 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 182

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
             GIRV TIAPGLF TPLL+ L EKV NFLA  +P P RLG P E+A LVQ+II NP +N
Sbjct: 183 PIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 242

Query: 242 GEVIRI 247
           GEVIR+
Sbjct: 243 GEVIRL 248

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  176 bits (447), Expect = 2e-55
 Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 16/256 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKELGPDVKFAPVDVT 60
           LK  + ++TGGA+G+G+A  ER   EG  + + DL P  E E+  + LG  V     DV+
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 62

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
              DV+        +FG+ D+ VN AGI               + + +K+   +N    F
Sbjct: 63  QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDEL------TFEQWKKTFEINVDSGF 116

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
            +A+     +  N        G IIN  S   +        Y ++K+  +G T  +A DL
Sbjct: 117 LMAKAFVPGMKRNG------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDL 170

Query: 181 AGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--N 237
              GI VN IAP L  T    +     + + L   + A  RL  P +       + +   
Sbjct: 171 GKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDA 230

Query: 238 PLINGEVIRIDGALRM 253
             I G+ + +DG +  
Sbjct: 231 SFITGQTLAVDGGMVR 246

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  175 bits (444), Expect = 4e-55
 Identities = 127/248 (51%), Positives = 164/248 (66%), Gaps = 12/248 (4%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
             LVTGGASGLG+A    +   G RVV+ DL         +  G D+ +   DVT EEDV
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDL---------RREGEDLIYVEGDVTREEDV 53

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
           ++AV   ++    L   V+ AG+  A KI        H L+ F+R+L VN +GTFNV RL
Sbjct: 54  RRAVARAQE-EAPLFAVVSAAGVGLAEKILGKE--GPHGLESFRRVLEVNLLGTFNVLRL 110

Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
           +A  + EN  + +G RGVI+NTAS+AA+EGQ GQ AY+ASK G+V +TLP AR+LAG GI
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

Query: 186 RVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVI 245
           RV T+APGLFDTPLL  L EK +  LA  +P P RLG P+E+A LV  I+ NP++NGEV+
Sbjct: 171 RVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVV 230

Query: 246 RIDGALRM 253
           R+DGALRM
Sbjct: 231 RLDGALRM 238

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 1e-54
 Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 23/261 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAP 56
            +  + LVTG + G+G A    +V++G +VV C       E +A E         +    
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            D+++EED+       +     +D+ +N AG++    + +       S   +K +  VN 
Sbjct: 68  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLS------GSTSGWKDMFNVNV 121

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--SGQVAYSASKSGIVGMTL 174
           +      R + Q + E  ++     G IIN  S++ +     S    YSA+K  +  +T 
Sbjct: 122 LALSICTREAYQSMKERNVD----DGHIININSMSGHRVLPLSVTHFYSATKYAVTALTE 177

Query: 175 PMARDLAGA--GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
            + ++L  A   IR   I+PG+ +T     L++K     A +     +   P++ A+ V 
Sbjct: 178 GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQ-MKCLKPEDVAEAVI 236

Query: 233 SIITNP--LINGEV-IRIDGA 250
            +++ P  +  G++ +R  G+
Sbjct: 237 YVLSTPAHIQIGDIQMRPTGS 257

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  172 bits (437), Expect = 1e-53
 Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 27/271 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFA 55
               V ++TG ++G+G+AT     REG +V +        E   +++        +V   
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DVT++    + +      FGKLD+ VN AG +          GT  S++ +   L +N
Sbjct: 63  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSK--TGTAQSIESYDATLNLN 120

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
                 + + +   +   K        ++  ++  +          YS +K+ I   T  
Sbjct: 121 LRSVIALTKKAVPHLSSTK------GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRN 174

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLN---------EKVRNFLARSIPAPQRLGHPDE 226
            A DL   GIRVN+I+PGL  T   S +                +   +PA   +G P +
Sbjct: 175 TAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQD 233

Query: 227 FAQLVQSIITNPL---INGEVIRIDGALRMI 254
            A+++  +        I G  + +DG   +I
Sbjct: 234 IAEVIAFLADRKTSSYIIGHQLVVDGGSSLI 264

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (434), Expect = 2e-53
 Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 35/268 (13%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPV 57
            G V LVTG A G+G+A  E ++ +G +V L D     G      L          F   
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV  ++ ++       D FG+LD+ VN AG+              ++  ++++ L +N V
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGV--------------NNEKNWEKTLQINLV 107

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT--LP 175
              +   L    + +      G  G+IIN +S+A     + Q  Y ASK GIVG T    
Sbjct: 108 SVISGTYLGLDYMSKQN---GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAA 164

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSML--------NEKVRNFLARSIPAPQRLGHPDEF 227
           +A +L  +G+R+N I PG  +T +L  +          + ++ +   I     +  P   
Sbjct: 165 LAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY-YGILDPPLI 223

Query: 228 AQLVQSIITNPLINGEVIRIDG--ALRM 253
           A  + ++I +  +NG +++I     +  
Sbjct: 224 ANGLITLIEDDALNGAIMKITTSKGIHF 251

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (431), Expect = 5e-53
 Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 21/259 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             G V +VTGG  G+G   V   V  G RVV+CD   S G ++ +EL     F   DVT 
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQ 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E+DV+  V      FG+LD  VN AG     +          S   F+++L +N +GT+ 
Sbjct: 63  EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEE-----TSAQGFRQLLELNLLGTYT 117

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + +L+   + +++       G +IN +S+    GQ+  V Y A+K  +  MT  +A D +
Sbjct: 118 LTKLALPYLRKSQ-------GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDES 170

Query: 182 GAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
             G+RVN I+PG   TPL   L                + P   R+G P E       + 
Sbjct: 171 PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL-GRMGQPAEVGAAAVFLA 229

Query: 236 T-NPLINGEVIRIDGALRM 253
           +      G  + + G   +
Sbjct: 230 SEANFCTGIELLVTGGAEL 248

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  169 bits (429), Expect = 9e-53
 Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 21/258 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L+G V LVTGGASG+G   V+ ++ EG +V   D+  + G+ +A ELG    F   DV+S
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E D    +   +   G L+V VN AGI     +          L+DF R+L +NT   F 
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETG------RLEDFSRLLKINTESVFI 117

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     + E         G IIN AS++++        YSASK+ +  +T   A    
Sbjct: 118 GCQQGIAAMKETG-------GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR 170

Query: 182 --GAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLG---HPDEFAQLVQSII 235
             G  IRVN+I P    TP++ + L + V   +    P   R G    P+  AQLV  + 
Sbjct: 171 KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230

Query: 236 T--NPLINGEVIRIDGAL 251
           +  + +++G  +  D ++
Sbjct: 231 SDESSVMSGSELHADNSI 248

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  168 bits (427), Expect = 2e-52
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 18/253 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
            +  V LVTG   G+G+   + + +    V+         +SV  E+   G +      D
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 67

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           V+ +E++ + +         +D+ VN         I   N       D+++ +L  N   
Sbjct: 68  VSKKEEISEVINKILTEHKNVDILVNN------AGITRDNLFLRMKNDEWEDVLRTNLNS 121

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F + +  ++ +  N+       G IIN +SI    G  GQ  YS+SK+G++G T  +A+
Sbjct: 122 LFYITQPISKRMINNR------YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAK 175

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN- 237
           +LA   I VN IAPG   + +   ++E+++  +  +IPA  R+G P+E A L   + ++ 
Sbjct: 176 ELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPA-GRMGTPEEVANLACFLSSDK 234

Query: 238 -PLINGEVIRIDG 249
              ING V  IDG
Sbjct: 235 SGYINGRVFVIDG 247

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  165 bits (419), Expect = 4e-51
 Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 14/250 (5%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   ++TGGA GLG     + V  G RVVL D+   EG + A+ELG   ++  +DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           EED Q+ V   ++ FG +D  VN AGIS    +   +      ++ F++++ +N  G F 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETES------VERFRKVVEINLTGVFI 116

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     + +         G I+N +S A   G +   +Y ASK G+ G++   A +L 
Sbjct: 117 GMKTVIPAMKDAG------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
              IRVN++ PG+  TP+ +    +       + P  +    P E A  V  ++++    
Sbjct: 171 TDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSY 230

Query: 240 INGEVIRIDG 249
           + G  + +DG
Sbjct: 231 VTGAELAVDG 240

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  164 bits (417), Expect = 6e-51
 Identities = 48/255 (18%), Positives = 87/255 (34%), Gaps = 26/255 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L     +      G+G  T   +V+   +  +         ++A+        ++ F   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 58  DVT-SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           DVT    + +K +    D    +D+ +N AGI                    +R + +N 
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGI--------------LDDHQIERTIAINF 108

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G  N          + K       G+I N  S+  +        YSASK+ +V  T  +
Sbjct: 109 TGLVNTTTAILDFWDKRKGGP---GGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSL 165

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
           A+     G+   +I PG+  TPL+        V   +A  +         ++  Q     
Sbjct: 166 AKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAE-LLLSHPTQTSEQCGQNFVKA 224

Query: 235 ITNPLINGEVIRIDG 249
           I     NG + ++D 
Sbjct: 225 IEAN-KNGAIWKLDL 238

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  164 bits (417), Expect = 8e-51
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 24/259 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L+G   LVTGG+ G+G   VE +   G  V  C     E      +    G  V+ +  D
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 59  VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           ++S  + Q+ +    + F GKL++ VN AGI    +  +Y      +++D+  I+ +N  
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDY------TVEDYSLIMSINFE 119

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             ++++ L+   +  ++      RG ++  +S++       +  Y A+K  +  +T  +A
Sbjct: 120 AAYHLSVLAHPFLKASE------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 173

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML-----NEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
            + A   IRVN + PG+  T L+ M       ++  N L       +R+G P E A +V 
Sbjct: 174 FEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-RRMGEPKELAAMVA 232

Query: 233 SIIT--NPLINGEVIRIDG 249
            +       + G++I +DG
Sbjct: 233 FLCFPAASYVTGQIIYVDG 251

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  164 bits (416), Expect = 9e-51
 Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 17/254 (6%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDV 59
           L G V ++TGG  G+G A   + V EG +V++    +  GE  AK +G    ++F   D 
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           + E+   K     + +FG +   VN AGI+    +         +  +++++L VN  G 
Sbjct: 64  SDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEET------TTAEWRKLLAVNLDGV 117

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           F   RL  Q +        GL   IIN +SI  + G     AY+ASK  +  M+   A D
Sbjct: 118 FFGTRLGIQRMKNK-----GLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172

Query: 180 --LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
             L    +RVNT+ PG   TPL+  L         R+      +G P++ A +   + +N
Sbjct: 173 CALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASN 232

Query: 238 --PLINGEVIRIDG 249
                 G    +DG
Sbjct: 233 ESKFATGSEFVVDG 246

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  162 bits (411), Expect = 9e-50
 Identities = 60/271 (22%), Positives = 113/271 (41%), Gaps = 27/271 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFA 55
                 ++TG ++G+G+ T     +EG  V +    +   E   + +         V   
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DVT+E+   + +      FGK+DV VN AG +          GT   +D + + L +N
Sbjct: 63  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGT--TGTDQGIDIYHKTLKLN 120

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
                 + +     +  +K        ++  ++ +A  + Q   + Y+ +K+ +   T  
Sbjct: 121 LQAVIEMTKKVKPHLVASK------GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRS 174

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLA---RSIPAPQRLGHPDE 226
            A DLA  GIRVN+++PG+ +T   + +      ++K  NF+A     IP     G P+ 
Sbjct: 175 TAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEH 233

Query: 227 FAQLVQ---SIITNPLINGEVIRIDGALRMI 254
            A ++        +  I G+ I  DG   ++
Sbjct: 234 IANIILFLADRNLSFYILGQSIVADGGTSLV 264

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  161 bits (408), Expect = 1e-49
 Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 18/254 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           LK    L+TG A G+G+AT+E   +EG R+V CD+        A+ +G       +DV  
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVAD 60

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
              V++         G+LD  V+ AGI+     +         L+D++ +L VN  G+F 
Sbjct: 61  PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKM------PLEDWELVLRVNLTGSFL 114

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           VA+ +++ + E            I   +   Y G  GQ  Y+AS +G+VG+T  +A +L 
Sbjct: 115 VAKAASEAMREKN-------PGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELG 167

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL 239
             GIRVNT+APG  +T + + + EKVR     + P   R G P E A     +++  +  
Sbjct: 168 RWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSF 226

Query: 240 INGEVIRIDGALRM 253
           I G+V+ +DG   +
Sbjct: 227 ITGQVLFVDGGRTI 240

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  161 bits (409), Expect = 1e-49
 Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 25/261 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
                 +VTGG  G+G A    +   G  V +     ++   V +++    G   K    
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV++ + V K +       G +   +  AG+S              + +DF  +  VN  
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATEL------THEDFAFVYDVNVF 120

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTA-------SIAAYEGQSGQVAYSASKSGIV 170
           G FN  R  A+L  +        +G I+ T+       + ++  G   QV Y++SK+   
Sbjct: 121 GVFNTCRAVAKLWLQK-----QQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACS 175

Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
            +   +A + A AGIRVN ++PG  +T   + +++K+R+  A +IP   R   P+E    
Sbjct: 176 NLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPL-NRFAQPEEMTGQ 234

Query: 231 VQSIITN--PLINGEVIRIDG 249
              ++++    + G    IDG
Sbjct: 235 AILLLSDHATYMTGGEYFIDG 255

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  161 bits (408), Expect = 3e-49
 Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 23/265 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           LKG   L+TGGASGLG+A V+R V EG +V + D        +  + G +V     DV S
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRS 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            ED ++A   C   FGK+D  +  AGI                   F  +  +N  G  +
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLP-EESLDAAFDEVFHINVKGYIH 121

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             +     +  ++       G +I T S A +    G   Y+A+K  IVG+   +A +LA
Sbjct: 122 AVKACLPALVASR-------GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA 174

Query: 182 GAGIRVNTIAPGLFDTPLLS----------MLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
              +RVN +  G  ++ L            +    + + L   +P   R+   +E+    
Sbjct: 175 P-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-GRMPEVEEYTGAY 232

Query: 232 QSIITNPL---INGEVIRIDGALRM 253
               T        G ++  DG L +
Sbjct: 233 VFFATRGDAAPATGALLNYDGGLGV 257

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  160 bits (406), Expect = 5e-49
 Identities = 52/271 (19%), Positives = 111/271 (40%), Gaps = 29/271 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFA 55
             G   ++TG ++G+G++      +EG +V +        E   +++         +   
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             DVT        +      FGK+D+ VN AG +      +    T   ++ +++   +N
Sbjct: 62  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANL----ADGTANTDQPVELYQKTFKLN 117

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
                 + + + + + + K        ++  ++ +A  +  SG   Y+ +K+ +   T  
Sbjct: 118 FQAVIEMTQKTKEHLIKTK------GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRC 171

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLA---RSIPAPQRLGHPDE 226
            A DL   G+RVN+++PG   T  +  +      ++K+ +F+      IP     G P+E
Sbjct: 172 TAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEE 230

Query: 227 FAQLVQ---SIITNPLINGEVIRIDGALRMI 254
            A ++        +  I G+ I  DG   ++
Sbjct: 231 IANIIVFLADRNLSSYIIGQSIVADGGSTLV 261

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  159 bits (403), Expect = 7e-49
 Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 21/252 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
             G+  LVTG   G+G+ TV+ +   G +VV      S+  S+AKE    ++   VD+  
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGD 61

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            +  +KA+       G +D+ VN A +               + + F R   VN    F 
Sbjct: 62  WDATEKAL----GGIGPVDLLVNNAALVIMQPFLEV------TKEAFDRSFSVNLRSVFQ 111

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           V+++ A+ +    +      G I+N +S+ A+      + YS++K  +  +T  MA +L 
Sbjct: 112 VSQMVARDMINRGVP-----GSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 166

Query: 182 GAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--N 237
              IRVN++ P +  T +   +  + +    L    P  ++    ++    +  +++  +
Sbjct: 167 PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL-RKFAEVEDVVNSILFLLSDRS 225

Query: 238 PLINGEVIRIDG 249
              +G  I +D 
Sbjct: 226 ASTSGGGILVDA 237

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (402), Expect = 1e-48
 Identities = 51/253 (20%), Positives = 103/253 (40%), Gaps = 21/253 (8%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT 60
            L G   LVTG   G+G+ TV+ +   G RVV      ++ +S+ +E    ++   VD+ 
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLG 62

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
             E  ++A+     S G +D+ VN A ++              + + F R   VN     
Sbjct: 63  DWEATERAL----GSVGPVDLLVNNAAVALLQPFLEV------TKEAFDRSFEVNLRAVI 112

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
            V+++ A+ +    +        I+N +S  +    +    Y ++K  +  +T  MA +L
Sbjct: 113 QVSQIVARGLIARGVPG-----AIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALEL 167

Query: 181 AGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN- 237
               IRVN + P +  T +      +      +   IP   +    +     +  ++++ 
Sbjct: 168 GPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL-GKFAEVEHVVNAILFLLSDR 226

Query: 238 -PLINGEVIRIDG 249
             +  G  + ++G
Sbjct: 227 SGMTTGSTLPVEG 239

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  157 bits (398), Expect = 4e-48
 Identities = 64/255 (25%), Positives = 124/255 (48%), Gaps = 15/255 (5%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
            +G + LVTG + G+G+A  E +   G +V+      +  ++++  LG + K   ++VT 
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 61

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
              ++  +   +  FG++D+ VN AGI+    +        + + +       N    F 
Sbjct: 62  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIE------TNLSSVFR 115

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           +++   + + + +       G II   S+    G  GQ  Y+A+K+G++G +  +AR++A
Sbjct: 116 LSKAVMRAMMKKR------HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVA 169

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
             GI VN +APG  +T +   L++  R  +   +PA  RLG   E A  V  + ++    
Sbjct: 170 SRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPA-GRLGGAQEIANAVAFLASDEAAY 228

Query: 240 INGEVIRIDGALRMI 254
           I GE + ++G + M+
Sbjct: 229 ITGETLHVNGGMYMV 243

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  158 bits (402), Expect = 4e-48
 Identities = 69/258 (26%), Positives = 103/258 (39%), Gaps = 33/258 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP---------TSEGESVAKELGPDV 52
             G V LVTG   GLG+A        G  VV+ DL          +S  + V +E+    
Sbjct: 5   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
             A  +  S E  +K V    D+FG++DV VN AGI               S +D+  I 
Sbjct: 65  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRI------SDEDWDIIQ 118

Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
            V+  G+F V R +   + +         G II TAS +   G  GQ  YSA+K G++G+
Sbjct: 119 RVHLRGSFQVTRAAWDHMKKQN------YGRIIMTASASGIYGNFGQANYSAAKLGLLGL 172

Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
              +  +     I  NTIAP        +++ E +                P+  A LV 
Sbjct: 173 ANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLV-----------EALKPEYVAPLVL 221

Query: 233 SIIT-NPLINGEVIRIDG 249
            +   +   NG +  +  
Sbjct: 222 WLCHESCEENGGLFEVGA 239

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  154 bits (389), Expect = 8e-47
 Identities = 63/255 (24%), Positives = 103/255 (40%), Gaps = 18/255 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   LVTG ASG+G+A ++   REG  +V  D            L  +      DV+ 
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            + V+       + FG+L    + AG++ +   +N        +                
Sbjct: 63  PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRV------------- 109

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
              L+   +   K  E    G  +      A  G  G   Y+A K G+VG+   +A +LA
Sbjct: 110 --NLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELA 167

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL 239
             G+RVN + PGL  TP+ + L          + P   R G P+E AQ    +++  +  
Sbjct: 168 RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAY 226

Query: 240 INGEVIRIDGALRMI 254
           I G+ + +DG   ++
Sbjct: 227 ITGQALYVDGGRSIV 241

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  153 bits (388), Expect = 2e-46
 Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 20/257 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LK    LVTGG  G+G A VE     G  +  C     E      +    G  V  +  D
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 59  VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
            +   + +K +      F GKLD+ +N  G   +    +Y      + +DF   +  N  
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDY------TAEDFSFHISTNLE 119

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             +++++L+  L+  +        G II  +SIA     S    YSA+K  +  +   +A
Sbjct: 120 SAYHLSQLAHPLLKASG------CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 173

Query: 178 RDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
            + A  GIR N +AP +  TPL  ++ +++ +  +    P   R G P+E + LV  +  
Sbjct: 174 CEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL-GRFGEPEEVSSLVAFLCM 232

Query: 237 --NPLINGEVIRIDGAL 251
                I G+ I +DG L
Sbjct: 233 PAASYITGQTICVDGGL 249

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  152 bits (385), Expect = 3e-46
 Identities = 70/255 (27%), Positives = 123/255 (48%), Gaps = 20/255 (7%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPVDVTS 61
           V +VTG + G+GKA    + + G +V++    +++  E V+K++   G        DV+ 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           E DV+  +    D++G +DV VN AGI+    +    K     + D          G F 
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT------GVFL 116

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             + + +++ + +      +G IIN AS+    G  GQ  Y+A+K+G++G +   AR+ A
Sbjct: 117 CTQAATKIMMKKR------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA 170

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL-- 239
              I VN + PG   + + + L E +   +  +IP   R G P+  A LV+ +  +P   
Sbjct: 171 SRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAAS 229

Query: 240 -INGEVIRIDGALRM 253
            I G+   IDG + +
Sbjct: 230 YITGQAFTIDGGIAI 244

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  152 bits (384), Expect = 5e-46
 Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 20/250 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V LV+GGA G+G + V  +V EG +VV  D+   EG+++A EL    ++  +DVT 
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ 63

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
               + AV     +FG L V VN A       I N      ++L +++RIL VN  G F 
Sbjct: 64  PAQWKAAVDTAVTAFGGLHVLVNNA------GILNIGTIEDYALTEWQRILDVNLTGVFL 117

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
             R   + + E           IIN +SI    G      Y+A+K  + G+T   A +L 
Sbjct: 118 GIRAVVKPMKEAGRGS------IINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 171

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL 239
            +GIRVN+I PGL  TP+   + E +            R   P E + LV  + +  +  
Sbjct: 172 PSGIRVNSIHPGLVKTPMTDWVPEDIFQ-----TAL-GRAAEPVEVSNLVVYLASDESSY 225

Query: 240 INGEVIRIDG 249
             G    +DG
Sbjct: 226 STGAEFVVDG 235

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  152 bits (385), Expect = 7e-46
 Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 19/257 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD--VKFAPVDV 59
           L+  V ++TGGA G+G+ T +  VR G +VV+ D+    G+ V   +G    + F   DV
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV 63

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           T +EDV+  V       GKLD+     G+                 +DFKR++ +N  G 
Sbjct: 64  TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLS----TTPYSILEAGNEDFKRVMDINVYGA 119

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA-YSASKSGIVGMTLPMAR 178
           F VA+ +A+++   K      +G I+ TASI+++    G    Y+A+K  ++G+T  +  
Sbjct: 120 FLVAKHAARVMIPAK------KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCT 173

Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
           +L   GIRVN ++P +  +PLL+ +    + +V     ++      L   ++ A  V  +
Sbjct: 174 ELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL 233

Query: 235 IT--NPLINGEVIRIDG 249
               +  ++G  + IDG
Sbjct: 234 AGDESKYVSGLNLVIDG 250

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 8e-46
 Identities = 48/236 (20%), Positives = 86/236 (36%), Gaps = 29/236 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           + G + L+TG   G+G+ T     +   ++VL D+     E  A +    G  V    VD
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 64

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
            ++ ED+  +    K   G + + VN AG+     +F             ++   VN + 
Sbjct: 65  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFA------TQDPQIEKTFEVNVLA 118

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F   +     + +N        G I+  AS A +      +AY +SK   VG    +  
Sbjct: 119 HFWTTKAFLPAMTKNN------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTD 172

Query: 179 DLA---GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           +LA     G++   + P   +T            F+     +      P+E    +
Sbjct: 173 ELAALQITGVKTTCLCPNFVNTG-----------FIKNPSTSLGPTLEPEEVVNRL 217

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  148 bits (374), Expect = 2e-44
 Identities = 41/257 (15%), Positives = 92/257 (35%), Gaps = 25/257 (9%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           +VT      G  +  R+   G  V   D    + + +         +  +   SE++  +
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---TYPQLKPMSEQEPAE 60

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
            +     ++G++DV V+    +  F+         ++++D++  +    +  F +    A
Sbjct: 61  LIEAVTSAYGQVDVLVSNDIFAPEFQPI-----DKYAVEDYRGAVEALQIRPFALVNAVA 115

Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
             + + K         II   S   +        Y+++++G   +   ++++L    I V
Sbjct: 116 SQMKKRKSGH------IIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPV 169

Query: 188 NTIAPGLFDTPLLSML--------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
             I P    +              N +    + +     QRLG   E  +LV  + +   
Sbjct: 170 FAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL-QRLGTQKELGELVAFLASGSC 228

Query: 238 PLINGEVIRIDGALRMI 254
             + G+V  + G   MI
Sbjct: 229 DYLTGQVFWLAGGFPMI 245

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  147 bits (372), Expect = 3e-44
 Identities = 78/269 (28%), Positives = 112/269 (41%), Gaps = 33/269 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
             G V LVTG    +G AT  R+  EG  + L D+     E     +   G + +    D
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           VTSEE V   V      FGK+D   N AG   AF          +  DDF R+L +N  G
Sbjct: 63  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQD-----YPSDDFARVLTINVTG 117

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F+V +  ++ +           G I+NTAS+A  +G     AY  SK  I+ +T   A 
Sbjct: 118 AFHVLKAVSRQMITQN------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAAL 171

Query: 179 DLAGAGIRVNTIAPGLFDTPLL----------------SMLNEKVRNFLARSIPAPQRLG 222
           DLA   IRVN I+PG      +                S   + V   +  S+P  +R G
Sbjct: 172 DLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRYG 230

Query: 223 HPDEFAQLVQSIITN--PLINGEVIRIDG 249
             +E   +V  ++ +    + G  + I G
Sbjct: 231 DINEIPGVVAFLLGDDSSFMTGVNLPIAG 259

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  146 bits (370), Expect = 4e-44
 Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 23/254 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
                 LVTGG  G+G A  +R+  +G +V +    +   + +            VDVT 
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--------GVEVDVTD 56

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            + V +A    ++  G ++V V+ AG+S    +         + + F++++  N  G F 
Sbjct: 57  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRM------TEEKFEKVINANLTGAFR 110

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           VA+ +++ +  NK       G +I   S++   G   Q  Y+ASK+G++GM   +AR+L+
Sbjct: 111 VAQRASRSMQRNK------FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS 164

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL 239
            A +  N +APG  DT +   L+E+++    + IPA +R+G P E A +V  + +     
Sbjct: 165 KANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLASEDASY 223

Query: 240 INGEVIRIDGALRM 253
           I+G VI +DG + M
Sbjct: 224 ISGAVIPVDGGMGM 237

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  148 bits (375), Expect = 4e-44
 Identities = 59/262 (22%), Positives = 101/262 (38%), Gaps = 21/262 (8%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
            +G V  +TGG +GLGK     +   G + V+        ++ A+++    G  V     
Sbjct: 23  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 82

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV   + VQ  V       G  ++ +N A  +        +       + +K I  +   
Sbjct: 83  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSP------NAWKTITDIVLN 136

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           GT  V      L    +L +       ++  +I A  G    V  +++K+G+  M+  +A
Sbjct: 137 GTAFV-----TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLA 191

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
            +    G+R N I PG   T                +   IP   RLG  +E A L   +
Sbjct: 192 AEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC-GRLGTVEELANLAAFL 250

Query: 235 ITN--PLINGEVIRIDGALRMI 254
            ++    ING VI+ DG   ++
Sbjct: 251 CSDYASWINGAVIKFDGGEEVL 272

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  146 bits (370), Expect = 8e-44
 Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 20/256 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPV 57
           L+G V LVTGG+ GLG    + +   G  VV+      E    A++L    G +      
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV++ E+V+K +   K+ FGKLD  VN AGI+       +       LD+F++++ VN  
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEF------PLDEFRQVIEVNLF 116

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           GT+ V R +  L+ E+        G +                 Y+ASK G+  +T  +A
Sbjct: 117 GTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISA-----YAASKGGVASLTKALA 171

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           ++    GIRVN IAPG + T +   +  + +  +++ + IP   R G P++   +   + 
Sbjct: 172 KEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL-GRTGVPEDLKGVAVFLA 230

Query: 236 T--NPLINGEVIRIDG 249
           +     + G++I +DG
Sbjct: 231 SEEAKYVTGQIIFVDG 246

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  145 bits (367), Expect = 3e-43
 Identities = 72/271 (26%), Positives = 116/271 (42%), Gaps = 33/271 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           L+G V LVTG   G+G+     + R G +V++    ++E  E V   +   G D      
Sbjct: 16  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           +V   ED+ +        FGKLD+  + +G+     + +       + ++F R+  +NT 
Sbjct: 76  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV------TPEEFDRVFTINTR 129

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY-SASKSGIVGMTLPM 176
           G F VAR + + +           G +I   SI        + A  S SK  I      M
Sbjct: 130 GQFFVAREAYKHLEIG--------GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 181

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLS------------MLNEKVRNFLARSIPAPQRLGHP 224
           A D+A   I VN +APG   T +              + NE+V  + A      +R+G P
Sbjct: 182 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLP 241

Query: 225 DEFAQLVQSIITN--PLINGEVIRIDGALRM 253
            + A++V  + +N    + G+VI IDG   M
Sbjct: 242 IDIARVVCFLASNDGGWVTGKVIGIDGGACM 272

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (368), Expect = 4e-43
 Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 28/263 (10%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--------GPDV 52
           +L+G V +VTGGA+G+GKA V+ ++  G  VV+        +S A EL           V
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
                ++ +EE+V   V    D+FGK++  VN  G        +       S   +  +L
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHI------SSKGWHAVL 122

Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
             N  GTF + +       +         G I+N   +    G    V   A+++G+  +
Sbjct: 123 ETNLTGTFYMCKAVYSSWMKEH------GGSIVNI-IVPTKAGFPLAVHSGAARAGVYNL 175

Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPL----LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
           T  +A + A +GIR+N +APG+  +           +       + IPA +R+G P+E +
Sbjct: 176 TKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPEEVS 234

Query: 229 QLVQSIITN--PLINGEVIRIDG 249
            +V  +++     I G+ + +DG
Sbjct: 235 SVVCFLLSPAASFITGQSVDVDG 257

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  144 bits (365), Expect = 5e-43
 Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 20/254 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           L G   ++TG  +G+GK         G  VV+ D+       V  E+   G        D
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 59  VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
           +TSE+++           GK+D+ VN AG     K F+        + DF+R   +N   
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGG-GPKPFDM------PMADFRRAYELNVFS 121

Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
            F++++L A  + +N        GVI+   S+AA        +Y++SK+    +   MA 
Sbjct: 122 FFHLSQLVAPEMEKNG------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAF 175

Query: 179 DLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT- 236
           DL    IRVN IAPG   T  L S++  ++   + +  P  +RLG P + A     + + 
Sbjct: 176 DLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI-RRLGQPQDIANAALFLCSP 234

Query: 237 -NPLINGEVIRIDG 249
               ++G+++ + G
Sbjct: 235 AASWVSGQILTVSG 248

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  143 bits (361), Expect = 2e-42
 Identities = 72/263 (27%), Positives = 118/263 (44%), Gaps = 27/263 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAP 56
               V L+TGG SGLG+AT  R+  EG ++ L D+ +   E+    +       +V    
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DV+ E  V+  V    + FG++D   N AGI               +  +F +++ +N 
Sbjct: 62  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTES-----FTAAEFDKVVSINL 116

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
            G F       +++ E         G+++NTAS+    G   Q  Y+A+K G+VG+T   
Sbjct: 117 RGVFLGLEKVLKIMREQG------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNS 170

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSML--------NEKVRNFLARSIPAPQRLGHPDEFA 228
           A +    GIR+N IAPG   TP++             K      +  P+ +R G   E A
Sbjct: 171 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-KRYGEAPEIA 229

Query: 229 QLVQSIITN--PLINGEVIRIDG 249
            +V  ++++    +N  V+ IDG
Sbjct: 230 AVVAFLLSDDASYVNATVVPIDG 252

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  141 bits (356), Expect = 9e-42
 Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 27/263 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVD 58
           LKG   LVTGG+ G+G A VE +   G RV  C     E +   +     G +V+ +  D
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 59  VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           + S  +  K +      F GKL++ VN AG+    +  ++      +  D+  I+  N  
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDF------TEKDYNIIMGTNFE 117

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
             +++++          L +    G +I  +SIA +        YSASK  I  MT  +A
Sbjct: 118 AAYHLSQ------IAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLA 171

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLS-------MLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
            + A   IRVN++APG+  TPL+           E++ NF+ +  P   R G P E + L
Sbjct: 172 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK-TPM-GRAGKPQEVSAL 229

Query: 231 VQSIIT--NPLINGEVIRIDGAL 251
           +  +       I G++I  DG  
Sbjct: 230 IAFLCFPAASYITGQIIWADGGF 252

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  140 bits (354), Expect = 2e-41
 Identities = 67/268 (25%), Positives = 107/268 (39%), Gaps = 32/268 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-----ESVAKELGPDVKFA 55
           MLKG V +VTG  SG+G      +  +G  +VL     +         +A + G  V + 
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 56  PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
             D++  E V+  V       G++D+ VN AGI     I ++        + +  IL +N
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT------EKWDAILALN 114

Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
               F+    +   + +         G IIN AS       + + AY A+K G+VG T  
Sbjct: 115 LSAVFHGTAAALPHMKKQG------FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKV 168

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSML------------NEKVRNFLARSIPAPQRLGH 223
            A + AG GI  N I PG   TPL+                   R  L+   P+  +   
Sbjct: 169 TALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVT 227

Query: 224 PDEFAQLVQSIITN--PLINGEVIRIDG 249
           P++       + ++    I G  + +DG
Sbjct: 228 PEQLGGTAVFLASDAAAQITGTTVSVDG 255

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  139 bits (351), Expect = 5e-41
 Identities = 65/267 (24%), Positives = 106/267 (39%), Gaps = 33/267 (12%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
           L G V L TG   G+G+     + R G  VV+    +S+  E V  EL   G        
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           D++   +V          FG LD  ++ +G+               + + F ++  +NT 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELE------VTQELFDKVFNLNTR 117

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F VA+   +              +I+ ++  A   G      Y+ SK+ + G     A
Sbjct: 118 GQFFVAQQGLKHCRRGG-------RIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFA 170

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLS-------------MLNEKVRNFLARSIPAPQRLGHP 224
            D    G+ VN IAPG   T +               M  EK+   LA   P  +R+G+P
Sbjct: 171 VDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYP 229

Query: 225 DEFAQLVQSIIT--NPLINGEVIRIDG 249
            +  + V ++    +  ING+VI++ G
Sbjct: 230 ADIGRAVSALCQEESEWINGQVIKLTG 256

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  138 bits (348), Expect = 2e-40
 Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 20/260 (7%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL---GPDVKFAPV 57
           L+G V ++TG ++GLGK+   R   E  +VV+       E  SV +E+   G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DVT E DV   V      FGKLDV +N         + N       SL D+ +++  N  
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINN------AGLENPVSSHEMSLSDWNKVIDTNLT 118

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
           G F  +R + +   EN +      G +IN +S+         V Y+ASK G+  MT  +A
Sbjct: 119 GAFLGSREAIKYFVENDIK-----GTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLA 173

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            + A  GIRVN I PG  +TP+ +    + + R  +   IP    +G P+E A +   + 
Sbjct: 174 LEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAAWLA 232

Query: 236 T--NPLINGEVIRIDGALRM 253
           +     + G  +  DG + +
Sbjct: 233 SSEASYVTGITLFADGGMTL 252

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  137 bits (345), Expect = 4e-40
 Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 25/265 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G   L+TG A G+G+A  E  VREG RV + D+      + A E+GP      +DVT 
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTD 62

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           +  + + V    D +G +D+ VN         +F+       + + + R+  +N  GT  
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNN------AALFDLAPIVEITRESYDRLFAINVSGTLF 116

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + +  A+ +             IIN AS A   G++    Y A+K+ ++ +T     +L 
Sbjct: 117 MMQAVARAMIAGGRGGK-----IINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI 171

Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEK-----------VRNFLARSIPAPQRLGHPDEFAQL 230
             GI VN IAPG+ D      ++ K            +  +  ++P   R+G  ++   +
Sbjct: 172 RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-GRMGRAEDLTGM 230

Query: 231 VQSIIT--NPLINGEVIRIDGALRM 253
              + T     I  +   +DG   M
Sbjct: 231 AIFLATPEADYIVAQTYNVDGGNWM 255

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  136 bits (344), Expect = 6e-40
 Identities = 67/264 (25%), Positives = 108/264 (40%), Gaps = 27/264 (10%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVT 60
             V LVTG  SG+G     R+ +EG RV +C        +  KEL   G +      DV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 61  SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           S  +++  V    + +G +DV VN AG                + + +  ++  N  G F
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAE------LADELWLDVVETNLTGVF 115

Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
            V +   +     +         I+N AS    +G      YSASK G+VG T  +  +L
Sbjct: 116 RVTKQVLKAGGMLERGTG----RIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 171

Query: 181 AGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDEFAQ 229
           A  GI VN + PG  +TP+ + +            E+  + +   +P   R   P E A+
Sbjct: 172 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAE 230

Query: 230 LVQSIIT--NPLINGEVIRIDGAL 251
           +V  +I      +  + + + G L
Sbjct: 231 MVAYLIGPGAAAVTAQALNVCGGL 254

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 4e-39
 Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 28/257 (10%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           L G V ++T  A G+G+A      REG +V+  D+  S+ + + K  G  ++   +DVT 
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG--IQTRVLDVTK 61

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           ++ + +      +   +LDV  N AG      + +          D+   + +N    + 
Sbjct: 62  KKQIDQ----FANEVERLDVLFNVAGFVHHGTVLDC------EEKDWDFSMNLNVRSMYL 111

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPMARDL 180
           + +     +   K       G IIN +S+A+  +G   +  YS +K+ ++G+T  +A D 
Sbjct: 112 MIKAFLPKMLAQK------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADF 165

Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEK------VRNFLARSIPAPQRLGHPDEFAQLVQSI 234
              GIR N + PG  DTP L    +        RN   +      R    +E A L   +
Sbjct: 166 IQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYL 224

Query: 235 IT--NPLINGEVIRIDG 249
            +  +  + G  + IDG
Sbjct: 225 ASDESAYVTGNPVIIDG 241

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  133 bits (335), Expect = 2e-38
 Identities = 52/264 (19%), Positives = 97/264 (36%), Gaps = 19/264 (7%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDL-PTSEGESVAKEL----GPDVKFAPVDVT 60
             ++TGGA  +G +   R+ ++G RVV+         + +  EL             D++
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 61  S----EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-----FKRI 111
                 +  +  +     +FG+ DV VN A       +   +     +           +
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVG 171
              N V    + R  A+   E           ++N           G   Y+ +K  + G
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSR-NLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           +T   A +LA   IRVN +APGL   P    + ++ +    R +P  Q      + A  +
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPLGQSEASAAQIADAI 239

Query: 232 QSIITN--PLINGEVIRIDGALRM 253
             +++     I G  +++DG L +
Sbjct: 240 AFLVSKDAGYITGTTLKVDGGLIL 263

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  130 bits (328), Expect = 8e-38
 Identities = 51/255 (20%), Positives = 94/255 (36%), Gaps = 35/255 (13%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGR-------VVLCDLPTSEGESVAKEL---GPDV 52
           K ++ L+TG   G+G+A      R           +VL     ++ E ++ E    G   
Sbjct: 1   KHIL-LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALT 59

Query: 53  KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
                D++   DV++      + +G +D  VN AG+     + +       + +DF   +
Sbjct: 60  DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSD------LTEEDFDYTM 113

Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
             N  GTF + +    L+           G I    S+AA +       Y  SK G  G+
Sbjct: 114 NTNLKGTFFLTQALFALMERQH------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGL 167

Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
              M        +R+  + PG   TP+   +++++             +  P++ A  V 
Sbjct: 168 VETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM----------QALMMMPEDIAAPVV 217

Query: 233 SIITNP--LINGEVI 245
                P   +  E+I
Sbjct: 218 QAYLQPSRTVVEEII 232

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  130 bits (328), Expect = 8e-38
 Identities = 51/253 (20%), Positives = 103/253 (40%), Gaps = 28/253 (11%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
           ++    LV   + G+G+A  + + +EG  V +C       E + K  G   ++   D+  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR----NEELLKRSG--HRYVVCDLRK 55

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
           + D+        +   ++D+ V  AG   A              +DFK  +    +    
Sbjct: 56  DLDL------LFEKVKEVDILVLNAGGPKAGFFDELTN------EDFKEAIDSLFLNMIK 103

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
           + R     + E         G I+   S +           ++++  + G    ++ ++A
Sbjct: 104 IVRNYLPAMKEKG------WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA 157

Query: 182 GAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NP 238
             GI VN +APG  +T  +  +L+E+ +  +   IP  +R+  P+E A +V  + +    
Sbjct: 158 PYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKAS 216

Query: 239 LINGEVIRIDGAL 251
            + G+ I +DG L
Sbjct: 217 YLTGQTIVVDGGL 229

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  130 bits (328), Expect = 1e-37
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 26/263 (9%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
           V LVTG   G+GKA   R+V++G  V + D   +  ++VA E+   G       VDV+  
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
           + V  AV   + + G  DV VN AG++ +  I +     V  + +       N  G    
Sbjct: 63  DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNI------NVKGVIWG 116

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
            + + +   +           IIN  S A + G      YS+SK  + G+T   ARDLA 
Sbjct: 117 IQAAVEAFKKEGHGGK-----IINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 171

Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAP----------QRLGHPDEFAQLVQ 232
            GI VN   PG+  TP+ + ++ +V     + +              RL  P++ A  V 
Sbjct: 172 LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVS 231

Query: 233 SIIT--NPLINGEVIRIDGALRM 253
            + +  +  + G+ + IDG +  
Sbjct: 232 YLASPDSDYMTGQSLLIDGGMVF 254

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 1e-36
 Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 31/259 (11%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAP 56
           ML+G   +VTG + G+G+     + + G  VV+        + V             +  
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
             +      ++ V       G LD+ +     + +  +F+        +   ++ + VN 
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH------DDIHHVRKSMEVNF 124

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           +    +   +  ++ ++        G I+  +S+A         AYSASK  + G    +
Sbjct: 125 LSYVVLTVAALPMLKQS-------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSI 177

Query: 177 ARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
            ++ +     + +     GL DT        K  + +     AP      +E A     I
Sbjct: 178 RKEYSVSRVNVSITLCVLGLIDTETA----MKAVSGIVHMQAAP-----KEECA---LEI 225

Query: 235 ITNPLINGEVIRIDGALRM 253
           I    +  E +  D +L  
Sbjct: 226 IKGGALRQEEVYYDSSLWT 244

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  126 bits (318), Expect = 4e-36
 Identities = 44/260 (16%), Positives = 98/260 (37%), Gaps = 24/260 (9%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVR---EGGRVVLCDLPTSEGESVAKEL-----GPDVK 53
           L   V ++TG + G G+A   ++ R    G  +++     S    + +EL        V 
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

Query: 54  FAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRI 111
            A  D+ +E  VQ+ +   ++   + +       I+ A  + + +KG ++   L +    
Sbjct: 64  LAAADLGTEAGVQRLLSAVRE-LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 112 LLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVG 171
             +N      +   +     ++          ++N +S+ A +   G   Y A K+    
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGL----SKTVVNISSLCALQPYKGWGLYCAGKAARDM 178

Query: 172 MTLPMARDLAGAGIRVNTIAPGLFDTPLL-----SMLNEKVRNFLARSIPAPQRLGHPDE 226
           +   +A +     +RV + APG  D  +      +  + ++R+ L +       L     
Sbjct: 179 LYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GALVDCGT 235

Query: 227 FAQLVQSIITNP-LINGEVI 245
            AQ +  ++      +G  +
Sbjct: 236 SAQKLLGLLQKDTFQSGAHV 255

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  124 bits (313), Expect = 2e-35
 Identities = 41/215 (19%), Positives = 74/215 (34%), Gaps = 22/215 (10%)

Query: 1   MLKGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVD 58
           M  G V +VTG   G+G   V+++V++     ++       +   +       V   P+ 
Sbjct: 1   MSPGSV-VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLT 59

Query: 59  VTSEEDVQKAVLLCKDSFGK--LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           VT ++ +   V    +  G   L + +N AG+  ++           +       L VNT
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTE-----PNRAVIAEQLDVNT 114

Query: 117 VGTFNVARLSAQLIHENKLNEDGLR------------GVIINTASIAAYEGQSGQVAYSA 164
                + +    L+      E G +              + +     +   Q   +AY  
Sbjct: 115 TSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRM 174

Query: 165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL 199
           SK+ I      +A DL    + V    PG   T L
Sbjct: 175 SKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  124 bits (312), Expect = 3e-35
 Identities = 53/261 (20%), Positives = 93/261 (35%), Gaps = 19/261 (7%)

Query: 2   LKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD--VKFAPV 57
           L G   LV G  +   LG A   ++   G  V L            K             
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DVT +E++       K++FG LD  V+    +    +            D+   L V+  
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRY--IDTRRQDWLLALEVSAY 123

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
               VAR +  L+ E         G I+     A+ +        + +K+ +      +A
Sbjct: 124 SLVAVARRAEPLLREG--------GGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLA 175

Query: 178 RDLAGAGIRVNTIAPGL--FDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
            +L   G+RVN I+ G              K+ + +A++ P  +R    +E   L   ++
Sbjct: 176 YELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL-RRNITQEEVGNLGLFLL 234

Query: 236 T--NPLINGEVIRIDGALRMI 254
           +     I GEV+ +D    ++
Sbjct: 235 SPLASGITGEVVYVDAGYHIM 255

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  118 bits (295), Expect = 9e-33
 Identities = 42/257 (16%), Positives = 83/257 (32%), Gaps = 18/257 (7%)

Query: 1   MLKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAP 56
            L G   LVTG AS   +     + + REG  +            V +            
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            DV  +  +          + K D  V+  G +   ++       V   + FK    +++
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTR-EGFKIAHDISS 120

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
                +A+    +++            ++  + + A            +K+ +      M
Sbjct: 121 YSFVAMAKACRSMLNPGS--------ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYM 172

Query: 177 ARDLAGAGIRVNTIAPGLFDTP--LLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
           A  +   G+RVN I+ G   T          K+        P  +R    ++       +
Sbjct: 173 ANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFL 231

Query: 235 ITN--PLINGEVIRIDG 249
            ++    I+GEV+ +DG
Sbjct: 232 CSDLSAGISGEVVHVDG 248

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  117 bits (293), Expect = 1e-32
 Identities = 38/249 (15%), Positives = 73/249 (29%), Gaps = 31/249 (12%)

Query: 3   KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
           +    LV GG   LG   V+        V   D+  +E  S +  +           T +
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMT-----DSFTEQ 55

Query: 63  EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
            D   A +       K+D  +  AG        +          +   +   +   +   
Sbjct: 56  ADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSK-----SLFKNCDLMWKQSIWTSTIS 110

Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
           + L+ + + E  L             + AA +G  G + Y  +K  +  +   +A   +G
Sbjct: 111 SHLATKHLKEGGLL--------TLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSG 162

Query: 183 AG--IRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NP 238
                    + P   DTP          N  +            +   +     IT    
Sbjct: 163 MPSGAAAIAVLPVTLDTP---------MNRKSMPEADFSSWTPLEFLVETFHDWITGNKR 213

Query: 239 LINGEVIRI 247
             +G +I++
Sbjct: 214 PNSGSLIQV 222

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  115 bits (287), Expect = 1e-31
 Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 28/260 (10%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
           + +++G A+G+G AT + +   G ++V  D+   + E +A            D+++ E  
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDI--RDAEVIA------------DLSTAEGR 48

Query: 66  QKAVL-LCKDSFGKLDVNVNCAGISCAFKIFN--------YNKGTVHSLDDFKRILLVNT 116
           ++A+  +       +D  V CAG+    K+               + +     +      
Sbjct: 49  KQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPA 108

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG-QVAYSASKSGIVGMTLP 175
               +    +     +N L      G      +I  + G+ G  +AY+ SK+ +      
Sbjct: 109 AVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRK 168

Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
            A     AG+R+NTIAPG  +TPLL   + + +    +A+ +P   R   P E A ++  
Sbjct: 169 RAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAF 228

Query: 234 IIT--NPLINGEVIRIDGAL 251
           +++     ++G  I IDG +
Sbjct: 229 LMSPAASYVHGAQIVIDGGI 248

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 3e-31
 Identities = 44/258 (17%), Positives = 82/258 (31%), Gaps = 39/258 (15%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDL------PTSEGESVAKEL---GPDVKFAP 56
           V L+TG +SG+G     R+  +  +                    A+ L      ++   
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           +DV   + V  A     +             + C   +           D    +L VN 
Sbjct: 64  LDVRDSKSVAAARERVTEGR--------VDVLVCNAGLGLLGPLEALGEDAVASVLDVNV 115

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
           VGT  + +     +           G ++ T S+    G      Y ASK  + G+   +
Sbjct: 116 VGTVRMLQAFLPDMKRRG------SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESL 169

Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLN---------------EKVRNFLARSIPAP-QR 220
           A  L   G+ ++ I  G   T  +  +                 +   +LA S     + 
Sbjct: 170 AVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREA 229

Query: 221 LGHPDEFAQLVQSIITNP 238
             +P+E A++  + +  P
Sbjct: 230 AQNPEEVAEVFLTALRAP 247

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (282), Expect = 1e-30
 Identities = 55/275 (20%), Positives = 89/275 (32%), Gaps = 79/275 (28%)

Query: 6   VGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTS 61
           V LVTGG  G+G A V  + R     VVL     + G++  ++L   G   +F  +D+  
Sbjct: 5   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 64

Query: 62  EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            + ++      +  +G LDV VN AGI+                   +  +  N  GT +
Sbjct: 65  LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTP------FHIQAEVTMKTNFFGTRD 118

Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV--------------------- 160
           V      LI          +G ++N +SI +                             
Sbjct: 119 VCTELLPLIKP--------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLM 170

Query: 161 --------------------AYSASKSGIVGMTLPMARDLA----GAGIRVNTIAPGLFD 196
                               AY  +K G+  ++   AR L+    G  I +N   PG   
Sbjct: 171 NKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 230

Query: 197 TPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
           T +                  P+    P+E A+  
Sbjct: 231 TDMA----------------GPKATKSPEEGAETP 249

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  109 bits (272), Expect = 1e-29
 Identities = 37/248 (14%), Positives = 76/248 (30%), Gaps = 32/248 (12%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           +V GG   LG A +E   + G  V+  DL  ++       +  +      + T +E    
Sbjct: 6   IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGN-----KNWTEQEQSIL 60

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
                     ++D     AG        +        + +   ++  +   +   A+L+ 
Sbjct: 61  EQTASSLQGSQVDGVFCVAGGWAGGSASSK-----DFVKNADLMIKQSVWSSAIAAKLAT 115

Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAG--I 185
             +            ++  T + AA       + Y  +K+ +  +T  +A   +G     
Sbjct: 116 THLKPGG--------LLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNS 167

Query: 186 RVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL---ING 242
            V TI P   DTP          N                  ++ +    T       +G
Sbjct: 168 AVLTIMPVTLDTP---------MNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSG 218

Query: 243 EVIRIDGA 250
            +++I   
Sbjct: 219 ALLKITTE 226

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  102 bits (255), Expect = 9e-27
 Identities = 55/276 (19%), Positives = 90/276 (32%), Gaps = 34/276 (12%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKEL---------------- 48
           V LVTG A  LG++  E +  EG  V L    ++    +++  L                
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 49  -----GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNY------ 97
                          VT      + V  C   +G+ DV VN A       +         
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 98  --NKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG 155
                          +   N +  + + +  A  +        G    IIN       + 
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSI 215
             G   Y+ +K  + G+T   A +LA   IRVN + PGL        +   V       +
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--DDMPPAVWEGHRSKV 241

Query: 216 PAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDG 249
           P  QR     E + +V  + ++    I G  +++DG
Sbjct: 242 PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 277

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 99.4 bits (246), Expect = 9e-26
 Identities = 52/258 (20%), Positives = 85/258 (32%), Gaps = 36/258 (13%)

Query: 8   LVTGGASGLGKATVERIVR---EGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSE 62
           L+TG   GLG   V+ ++        +        + + +        ++    +D+ + 
Sbjct: 6   LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNF 65

Query: 63  EDVQKAVLLCK--DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
           +   K V   +       L+V  N AGI+                 +    L  NTV   
Sbjct: 66  DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITA-----VRSQELLDTLQTNTVVPI 120

Query: 121 NVARLSAQLIHENKLNEDGLR-----GVIINTASIAAYEG---QSGQVAYSASKSGIVGM 172
            +A+    L+ +     +          IIN +SI          G  AY  SKS +   
Sbjct: 121 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAA 180

Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
           T  ++ DL    I   ++ PG   T +              S P    L  P    Q+VQ
Sbjct: 181 TKSLSVDLYPQRIMCVSLHPGWVKTDM-----------GGSSAP----LDVPTSTGQIVQ 225

Query: 233 SIIT-NPLINGEVIRIDG 249
           +I       NG  +  DG
Sbjct: 226 TISKLGEKQNGGFVNYDG 243

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 97.5 bits (241), Expect = 7e-25
 Identities = 38/256 (14%), Positives = 83/256 (32%), Gaps = 17/256 (6%)

Query: 1   MLKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAK--ELGPDVKFAP 56
            LKG  GL+ G A+   +     +    +G  +    L  S  + V    +         
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYE 61

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
           +DV+ EE  +      K   G LD  V+    +    +      T  S  +         
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNT-------- 113

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
                ++  S   +             ++  + + + +  +       +K+ +      +
Sbjct: 114 --AMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYL 171

Query: 177 ARDLAGAGIRVNTIAPGLFDTP-LLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
           A DL    IRVN ++ G   T     + + ++           ++    +E       ++
Sbjct: 172 AVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL 231

Query: 236 TN--PLINGEVIRIDG 249
           ++    ++GEV  +D 
Sbjct: 232 SSLSSGVSGEVHFVDA 247

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 85.6 bits (210), Expect = 2e-20
 Identities = 38/266 (14%), Positives = 76/266 (28%), Gaps = 24/266 (9%)

Query: 1   MLKGVVGLVTGGA--SGLGKATVERIVREGGRVVLCDLPTSE-GESVAKELGPDVKFAPV 57
           +L G   LV+G    S +          +G ++VL         + +   L        +
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 58  DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
           DV +EE +        ++ G  +                                 ++  
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
                +   A L   N           I                 + +KS +  +   +A
Sbjct: 123 AYSYASMAKALLPIMNPGG-------SIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVA 175

Query: 178 RDLAGAGIRVNTIAPGLFDTPLLS------------MLNEKVRNFLARSIPAPQRLGHPD 225
           R+    G+R N +A G   T  +S               + +     +  P    +    
Sbjct: 176 REAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT 235

Query: 226 EFAQLVQSIITN--PLINGEVIRIDG 249
             A+ V +++++  P   G++I  DG
Sbjct: 236 PVAKTVCALLSDWLPATTGDIIYADG 261

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 72.3 bits (176), Expect = 1e-15
 Identities = 41/247 (16%), Positives = 81/247 (32%), Gaps = 20/247 (8%)

Query: 4   GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEE 63
           G V LVTGG  G+G      + R G   +L    +      A EL  +++      T   
Sbjct: 10  GTV-LVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
                    ++  G +  +V  + +  A    +       + +  +R      +G  N+ 
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
            L+ +L               +  +S A+  G  G   Y+   + + G    +A+     
Sbjct: 129 ELTRELDLTA----------FVLFSSFASAFGAPGLGGYAPGNAYLDG----LAQQRRSD 174

Query: 184 GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGE 243
           G+    +A G +      M    V +   R          P+   + +Q+ +    +   
Sbjct: 175 GLPATAVAWGTWAGS--GMAEGPVADRFRRHGVIEMP---PETACRALQNALDRAEVCPI 229

Query: 244 VIRIDGA 250
           VI +   
Sbjct: 230 VIDVRWD 236

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 64.5 bits (156), Expect = 2e-13
 Identities = 22/186 (11%), Positives = 44/186 (23%), Gaps = 25/186 (13%)

Query: 2   LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDV 59
           +KG   +V  G   +G  +   +  EG  VVLC     + ++ A  +     V     + 
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 80

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
             +    +A                   I             +     ++    +  V  
Sbjct: 81  ADDASRAEA-------VKGAHFVFTAGAIG----------LELLPQAAWQNESSIEIVAD 123

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
           +N          +         G            G  G +     ++ I  +       
Sbjct: 124 YNAQPPLGIGGIDATDK-----GKEYGGKRAFGALG-IGGLKLKLHRACIAKLFESSEGV 177

Query: 180 LAGAGI 185
                I
Sbjct: 178 FDAEEI 183

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 60.5 bits (145), Expect = 2e-11
 Identities = 36/279 (12%), Positives = 73/279 (26%), Gaps = 32/279 (11%)

Query: 2   LKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDV 59
           L+G    + G A   G G A  + +   G  +++     +               + V  
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNY------------NKGTVHSLDD 107
                  K V      F   +        +  +   +             + G++  L  
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 108 FKRILLVNTVGTFNVARL-------------SAQLIHENKLNEDGLRGVIINTASIAAYE 154
                   +      +R               + L H   +   G   + +   +     
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185

Query: 155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLA 212
              G    SA  +      +          IRVNTI+ G   +     +   + +  +  
Sbjct: 186 PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSY 245

Query: 213 RSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDG 249
            + P  Q+    DE       +++     I G  I +D 
Sbjct: 246 NNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDN 283

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 57.0 bits (136), Expect = 2e-10
 Identities = 22/185 (11%), Positives = 46/185 (24%), Gaps = 9/185 (4%)

Query: 9   VTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKA 68
           + GG   LGK    R+   G  +V+      + E+ A E       A +     ED  +A
Sbjct: 5   LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEA 64

Query: 69  VLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQ 128
             +   +            +    +        V      K     +      +     +
Sbjct: 65  CDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE 124

Query: 129 LIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVN 188
                           ++T   A +     +  +     G    +  +   L      + 
Sbjct: 125 SEKVVS---------ALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLR 175

Query: 189 TIAPG 193
            +  G
Sbjct: 176 PLDAG 180

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.4 bits (121), Expect = 3e-08
 Identities = 27/329 (8%), Positives = 80/329 (24%), Gaps = 97/329 (29%)

Query: 6   VGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGE--------------------- 42
           +  + G     G G    + + +   +++    P                          
Sbjct: 4   ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKK 63

Query: 43  -SVAKELGPDVKF-------------APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGI 88
            ++   L  D  F                ++     ++    L    +GK+++ V+    
Sbjct: 64  MNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLAN 123

Query: 89  SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA 148
           +         +  + +      +  ++      ++     +      +         +  
Sbjct: 124 AK------EVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQ- 176

Query: 149 SIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA-GAGIRVNTIAPGLFDTPLLSML---- 203
                         S++K+ +   T  +A  L     IR+NTI+ G   +   + +    
Sbjct: 177 ----KVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN 232

Query: 204 -----------------------------------------NEKVRNFLARSIPAPQRLG 222
                                                     +    +  +  P  ++  
Sbjct: 233 NTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKL 291

Query: 223 HPDEFAQLVQSIITN--PLINGEVIRIDG 249
              +   +   +++     I G+ I +D 
Sbjct: 292 LSTDIGSVASFLLSRESRAITGQTIYVDN 320

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 48.4 bits (114), Expect = 2e-07
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 19/121 (15%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEE 63
           LVTGG+  +G  T  ++++ G  V++ D   +   SV   +    G    F   D+ +E 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
            + + +         +D  ++ AG+               S+         N  GT  + 
Sbjct: 64  LMTEILHDH-----AIDTVIHFAGLK----------AVGESVQKPLEYYDNNVNGTLRLI 108

Query: 124 R 124
            
Sbjct: 109 S 109

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 47.1 bits (111), Expect = 9e-07
 Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 20/150 (13%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLC-DLPTSEG--ESVAK-ELGPDVKFAPVDVTSEE 63
           L+TGGA  +G A V  I++     V+  D  T  G  ES++         F   D+    
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA 63

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
           ++ +          + D  ++ A  S              S+      +  N VGT+ + 
Sbjct: 64  EITRIF-----EQYQPDAVMHLAAES----------HVDRSITGPAAFIETNIVGTYALL 108

Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAY 153
            ++ +       ++        + ++   Y
Sbjct: 109 EVARKYWSALGEDKKNNF-RFHHISTDEVY 137

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 43.6 bits (101), Expect = 1e-05
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEG--ESVAKELG-PDVKFAPVDVTSEED 64
           L+TGG   LG       + +G  +++ D  + +G  +++       + +F   D+ ++ D
Sbjct: 4   LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKND 63

Query: 65  VQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
           V + +          D   + AG                S+D+      +N  GT N+  
Sbjct: 64  VTRLITKY-----MPDSCFHLAGQVA----------MTTSIDNPCMDFEINVGGTLNLLE 108

Query: 125 LSAQLIHENKL 135
              Q      +
Sbjct: 109 AVRQYNSNCNI 119

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 24/123 (19%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKELG-PDVKFAPVDVTSEEDV 65
           L+TGGA  +G    ++++ +G  V + D   T    +V   +G  + +    DV      
Sbjct: 5   LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV------ 58

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
                  +  + ++D   + A  +             + + +  + L  NT+GT N+  L
Sbjct: 59  ------VEPLYIEVDQIYHLASPA----------SPPNYMYNPIKTLKTNTIGTLNMLGL 102

Query: 126 SAQ 128
           + +
Sbjct: 103 AKR 105

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 42.1 bits (98), Expect = 3e-05
 Identities = 21/154 (13%), Positives = 40/154 (25%), Gaps = 30/154 (19%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEG--------ESVAKELGPDVKFAPVDV 59
           L+TG     G    E ++ +G  V       S                  P       D+
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 64

Query: 60  TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
           +   ++ + +        + D   N   +S              S +  +    V+ +GT
Sbjct: 65  SDTSNLTRILREV-----QPDEVYNLGAMS----------HVAVSFESPEYTADVDAMGT 109

Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAY 153
             +      L  E K             ++   Y
Sbjct: 110 LRLLEAIRFLGLEKK-------TRFYQASTSELY 136

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.5 bits (96), Expect = 5e-05
 Identities = 20/115 (17%), Positives = 32/115 (27%), Gaps = 9/115 (7%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           L+TG A  +G   +E +++   +VV  D   +         G       V     E    
Sbjct: 20  LITGVAGFIGSNLLETLLKLDQKVVGLDNFAT---------GHQRNLDEVRSLVSEKQWS 70

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
                +     LD   N                   S++D       N  G  N+
Sbjct: 71  NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNM 125

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.7 bits (94), Expect = 8e-05
 Identities = 25/118 (21%), Positives = 39/118 (33%), Gaps = 21/118 (17%)

Query: 8   LVTGGASGLGKATVERIVREGG--RVVLCDLPTSEG--ESVAKELGPDVKFAPVDVTSEE 63
           +VTGGA  +G   V  +        V + D  T  G   ++   LG  V+    D+   E
Sbjct: 6   IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAE 65

Query: 64  DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
            V K                       A   +       +SL+D    +  N +GT+ 
Sbjct: 66  LVDKLAAKA-----------------DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYT 106

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 40.7 bits (93), Expect = 9e-05
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 8  LVTGGASGLGKATVERIVREGGRVVLC-DLPTSEGESVAKELGPDVKFAPVDVTSEEDVQ 66
          L+ G    +G    ER++RE    V   D+ +           P   F   D++   +  
Sbjct: 4  LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH--PHFHFVEGDISIHSEWI 61

Query: 67 KAVL 70
          +  +
Sbjct: 62 EYHV 65

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 8  LVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAK---ELGPDVKFAPVDVTSEE 63
          LVTGGA  +G  TV  ++  G   V+ D L  S  +SVA+        + F  VD+   +
Sbjct: 5  LVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRK 64

Query: 64 DVQKAVLLCK 73
           ++K     K
Sbjct: 65 GLEKVFKEYK 74

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 26/179 (14%), Positives = 49/179 (27%), Gaps = 38/179 (21%)

Query: 6   VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG---------ESVAKELGPDVKFAP 56
           V L+TG     G    E ++ +G  V      +S           ++    +  ++K   
Sbjct: 3   VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHY 62

Query: 57  VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
            D+T    + K +   K                              S D  +    V+ 
Sbjct: 63  GDLTDSTCLVKIINEVKP---------------TEIYNLGAQSHVKISFDLAEYTADVDG 107

Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV---------AYSASK 166
           VGT  +          N      ++    +T+ +     +  Q           Y A+K
Sbjct: 108 VGTLRLLDAVKTCGLINS-----VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK 161

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.1 bits (89), Expect = 3e-04
 Identities = 11/94 (11%), Positives = 27/94 (28%), Gaps = 2/94 (2%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDV 65
            VTG     G      +   G  V    L      S+ +       ++    D+  +  +
Sbjct: 12  FVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKL 71

Query: 66  QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNK 99
            +++   +              +S +  +  Y+ 
Sbjct: 72  LESIREFQPEIVFHMAAQPLVRLSYSEPVETYST 105

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.9 bits (89), Expect = 3e-04
 Identities = 7/67 (10%), Positives = 16/67 (23%)

Query: 8  LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
           V G     G + +      G  V           +   +  P+V      + +   +  
Sbjct: 7  AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMD 66

Query: 68 AVLLCKD 74
           +     
Sbjct: 67 TLFEGAH 73

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.0 bits (87), Expect = 7e-04
 Identities = 19/118 (16%), Positives = 33/118 (27%), Gaps = 10/118 (8%)

Query: 8   LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
            +TG    +      R+  EG  V+  D   +E      E     +F  VD+   E+  K
Sbjct: 19  SITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM---TEDMFCDEFHLVDLRVMENCLK 75

Query: 68  AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
                      +D   N A           N   +   +      ++       + R 
Sbjct: 76  V-------TEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRF 126

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 8  LVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKF 54
          LVTG +   G+   +++     + V   L         +++G +   
Sbjct: 7  LVTGASGRTGQIVYKKLKEGSDKFVAKGL--VRSAQGKEKIGGEADV 51

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 11/53 (20%), Positives = 22/53 (41%)

Query: 1  MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVK 53
          + +G + LVTG    +    VE+++  G +V       S+  ++ K       
Sbjct: 8  LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP 60

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 8  LVTGGASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKELG--PDVKFAPVDVTSEED 64
          LVTG     G    + ++ +G RV       S       +ELG   D+++   D+     
Sbjct: 4  LVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACS 63

Query: 65 VQK 67
          VQ+
Sbjct: 64 VQR 66

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	254
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.89
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.84
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.83
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.82
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.81
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.81
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.8
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.8
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.78
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.78
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.77
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.77
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.77
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.76
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.75
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.75
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.74
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.74
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.73
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.67
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.66
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.54
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.48
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.43
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.34
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.29
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.22
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.15
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.14
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.39
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.29
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.28
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.22
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.16
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.09
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.05
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.02
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.02
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.01
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.98
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.95
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.88
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.83
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.8
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.77
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.77
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.72
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.71
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.68
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.67
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.57
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.53
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.48
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.48
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.47
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.45
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.45
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.44
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.44
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.43
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.42
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.4
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.35
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.35
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.27
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.26
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.26
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.24
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.22
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.22
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.22
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.18
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.18
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.16
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.14
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.13
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.08
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.04
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.02
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.01
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.01
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.0
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.99
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.98
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.98
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.97
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.94
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.94
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.91
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.89
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.85
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.77
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.71
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.59
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.58
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.58
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.55
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.53
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.52
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.52
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.48
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.44
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.41
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.41
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.28
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.27
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.26
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.25
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.2
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.15
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.14
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.14
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.1
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.1
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.07
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.94
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.88
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.86
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.85
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	95.83
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.81
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.8
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.8
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.73
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.65
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.63
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.63
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.58
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.55
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.45
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.44
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.39
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.33
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	95.33
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.2
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.17
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.16
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.1
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.08
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.07
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.0
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.97
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.88
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.82
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.78
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.76
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.74
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.73
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	94.57
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.42
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.39
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	94.29
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.27
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	94.25
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.25
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.24
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.22
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	94.22
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.16
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.15
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.01
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.93
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.87
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.87
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.86
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.79
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.64
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.49
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	93.31
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.22
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.13
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.09
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.05
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.85
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.84
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.81
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.74
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	92.72
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.6
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.51
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	92.4
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.38
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	92.18
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	92.11
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.0
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.81
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.75
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.73
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	91.66
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	91.62
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	91.56
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	91.56
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	91.48
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	91.45
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	91.41
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	90.93
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.9
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	90.79
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.61
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.36
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	90.31
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	90.19
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.04
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	89.89
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	89.88
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	89.85
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	89.84
d1ptma_	329	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	89.78
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.71
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.63
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	89.57
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	89.13
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.07
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	88.55
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	88.48
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.36
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.23
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	87.81
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	87.58
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.54
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.13
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.91
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	86.87
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.85
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	86.82
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	86.73
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.62
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.58
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.48
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	86.45
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	86.06
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	86.03
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	85.99
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	85.96
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.93
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	85.62
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	85.58
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	85.36
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	85.22
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	85.13
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.88
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.52
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	84.48
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	84.44
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	84.06
d2a9pa1	117	DNA-binding response regulator MicA, N-terminal do	83.92
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.79
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	83.75
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	83.7
d1ny5a1	137	Transcriptional activator sigm54 (NtrC1), N-termin	83.68
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	83.59
d3bswa1	193	Acetyltransferase PglD {Campylobacter jejuni [TaxI	83.27
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	83.17
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	83.13
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	83.01
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	83.0
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	82.95
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	82.95
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.73
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	82.56
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	82.19
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	82.16
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	81.95
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	81.88
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	81.77
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	81.52
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	81.52
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	81.41
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	81.35
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	81.26
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	81.2
d2pl1a1	119	PhoP receiver domain {Escherichia coli [TaxId: 562	81.1
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	80.97
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.19
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.02
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.01

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.9e-60  Score=379.15  Aligned_cols=240  Identities=27%  Similarity=0.514  Sum_probs=229.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++.+..+++||++|+++++++++++.+++|++|+
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            68999999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|.++|+|.+++      .|+||++||..+..+.++...
T Consensus        82 lVnnAg~~~~~~~~~------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~G~II~isS~~~~~~~~~~~~  149 (243)
T d1q7ba_          82 LVNNAGITRDNLLMR------MKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR------HGRIITIGSVVGTMGNGGQAN  149 (243)
T ss_dssp             EEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCHHHHHCCTTCHH
T ss_pred             ehhhhhhcccccccc------ccccccccccceeechhhhhHHHHHHHHHHcC------CCEeeeecchhhcCCCCCCHH
Confidence            999999887777766      89999999999999999999999999999887      799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |++||+|+.+|+|++|.|++++|||||+|+||+++|++.+...++..+.+.+..|. +|+.+|||+|+.+.||++  +.+
T Consensus       150 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~  228 (243)
T d1q7ba_         150 YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPA-GRLGGAQEIANAVAFLASDEAAY  228 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999999988877777888888998 999999999999999997  479


Q ss_pred             cccceEEecCCcccC
Q psy12833        240 INGEVIRIDGALRMI  254 (254)
Q Consensus       240 ~~G~~i~~~gG~~~~  254 (254)
                      +|||+|.+|||.+|+
T Consensus       229 itGq~i~vdGG~~~v  243 (243)
T d1q7ba_         229 ITGETLHVNGGMYMV  243 (243)
T ss_dssp             CCSCEEEESTTSSCC
T ss_pred             CcCCeEEECCCeEeC
Confidence            999999999999986

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4e-58  Score=371.38  Aligned_cols=238  Identities=29%  Similarity=0.479  Sum_probs=220.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++.++++|++|+++++++++++.+++|+
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999999999999999998888776   567899999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++.+      .+.++|++.+++|+.++++++|+++|.|.+++      .|+||++||..+..+.++
T Consensus        88 iDilvnnag~~~~~~~~~------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~G~IVnisS~~~~~~~~~  155 (251)
T d2c07a1          88 VDILVNNAGITRDNLFLR------MKNDEWEDVLRTNLNSLFYITQPISKRMINNR------YGRIINISSIVGLTGNVG  155 (251)
T ss_dssp             CCEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT------CEEEEEECCTHHHHCCTT
T ss_pred             ceeeeecccccccccccc------ccHHHHhhhheeeehhhhhhhhhcCcccccCC------CeEEEEECCHHhcCCCCC
Confidence            999999999877666655      89999999999999999999999999999987      799999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      ...|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+...++..+.+.+..|+ +|+.+|||+|+.+.||++  
T Consensus       156 ~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~  234 (251)
T d2c07a1         156 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPA-GRMGTPEEVANLACFLSSDK  234 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999999999999988888888888899998 999999999999999996  


Q ss_pred             CCCcccceEEecCCcc
Q psy12833        237 NPLINGEVIRIDGALR  252 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~  252 (254)
                      +.++|||+|.+|||+|
T Consensus       235 s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         235 SGYINGRVFVIDGGLS  250 (251)
T ss_dssp             GTTCCSCEEEESTTSC
T ss_pred             hCCCcCcEEEECCCcC
Confidence            4799999999999986

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1e-57  Score=371.16  Aligned_cols=239  Identities=29%  Similarity=0.442  Sum_probs=211.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC-chhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT-SEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ||+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++    +.++.+++||++|+++++++++++.++
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999975 4455555443    678999999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +|++|++|||||.....++.+      .+.++|++.+++|+.++++++|.++|+|.+++      .|+||++||..+..+
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~------~G~Iv~isS~~~~~~  148 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIED------FPTEKWDAILALNLSAVFHGTAAALPHMKKQG------FGRIINIASAHGLVA  148 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSC
T ss_pred             hCCCcEEEeecccccCCchhh------hhHHhhhhhhhccccccccccchhhhhHhhcC------CceEeecccccceec
Confidence            999999999999987777666      89999999999999999999999999999987      799999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH------------HHHHHHHhcCCCCCCCCC
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE------------KVRNFLARSIPAPQRLGH  223 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~------------~~~~~~~~~~~~~~~~~~  223 (254)
                      .|+...|+++|+|+.+|++++|.|++++||+||+|+||+++|++.+...+            ...+.+.+..|. +|+.+
T Consensus       149 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~  227 (260)
T d1x1ta1         149 SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVT  227 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT-CCCBC
T ss_pred             cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC-CCCcC
Confidence            99999999999999999999999999999999999999999998765321            122335667888 99999


Q ss_pred             HHHHHHHHHHHhc--CCCcccceEEecCCcc
Q psy12833        224 PDEFAQLVQSIIT--NPLINGEVIRIDGALR  252 (254)
Q Consensus       224 ~~~va~~~~~l~~--~~~~~G~~i~~~gG~~  252 (254)
                      |||+|+.++||++  +.++|||+|.+|||+|
T Consensus       228 pediA~~v~fL~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         228 PEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhChhhCCCcCCEEEECcchh
Confidence            9999999999997  4799999999999997

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3.6e-57  Score=366.90  Aligned_cols=240  Identities=28%  Similarity=0.449  Sum_probs=222.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|+.|+++|++|++++|+.+++++..++++.++.+++||++|+++++++++++.+++|++|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|.+.|.|.++..     .|+||++||..+..+.++...
T Consensus        83 lVnnAg~~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~-----~g~Iv~isS~~~~~~~~~~~~  151 (256)
T d1k2wa_          83 LVNNAALFDLAPIVE------ITRESYDRLFAINVSGTLFMMQAVARAMIAGGR-----GGKIINMASQAGRRGEALVGV  151 (256)
T ss_dssp             EEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-----CEEEEEECCGGGTSCCTTCHH
T ss_pred             EEeeccccccccccc------CCHHHHHhhhceeeeccccchhhccchhHHhcc-----CCccccccchhhccccccccc
Confidence            999999887776666      899999999999999999999999998766531     589999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH-----------HHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE-----------KVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      |+++|+|+.+|++++|.|++++|||||+|+||+++|++++...+           +..+.+.+.+|+ +|+.+|||+|+.
T Consensus       152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~~~p~evA~~  230 (256)
T d1k2wa_         152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-GRMGRAEDLTGM  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            99999999999999999999999999999999999998765432           334556677898 999999999999


Q ss_pred             HHHHhc--CCCcccceEEecCCccc
Q psy12833        231 VQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++||++  +.++|||+|.+|||++|
T Consensus       231 v~fL~S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         231 AIFLATPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             HHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHhCchhCCccCceEEECcchhh
Confidence            999997  47999999999999886

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2e-57  Score=365.07  Aligned_cols=234  Identities=35%  Similarity=0.503  Sum_probs=218.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|+.|+++|++|++++|++++++++.++++.++.+++||++|+++++++++++.++++++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            68999999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|.+.|.|.+++      .|+||++||..+..+.++...
T Consensus        84 linnAG~~~~~~~~~------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~G~Ii~isS~~~~~~~~~~~~  151 (244)
T d1nffa_          84 LVNNAGILNIGTIED------YALTEWQRILDVNLTGVFLGIRAVVKPMKEAG------RGSIINISSIEGLAGTVACHG  151 (244)
T ss_dssp             EEECCCCCCCBCTTT------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCcccCCCchhh------CCHHHHhHHhhcccchhhHHHHHHHhHHHhcC------cceEEeccccccccccccccc
Confidence            999999887766665      89999999999999999999999999999987      799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |+++|+|+.+|+|++|.|++++|||||+|+||+++|++.+...++     ....|+ +|+.+|||+|+.++||++  +.+
T Consensus       152 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~pl-~R~~~p~diA~~v~fL~s~~s~~  225 (244)
T d1nffa_         152 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-----IFQTAL-GRAAEPVEVSNLVVYLASDESSY  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-----CSCCSS-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-----HHhccc-cCCCCHHHHHHHHHHHhChhhCC
Confidence            999999999999999999999999999999999999998665433     234677 999999999999999996  479


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      +|||+|.+|||++.
T Consensus       226 itG~~i~vDGG~~a  239 (244)
T d1nffa_         226 STGAEFVVDGGTVA  239 (244)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCEEEECCCeec
Confidence            99999999999863

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.8e-57  Score=362.05  Aligned_cols=236  Identities=34%  Similarity=0.539  Sum_probs=219.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+++++++..+++  +.++++||++|+++++++++++.+++|++|+
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--GAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--TCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            78999999999999999999999999999999999999998888765  4778999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||+....++.+      .+.++|++.+++|+.++++++|+++|.|.++.      .+.++++|| .+..+.++...
T Consensus        81 lVnnAG~~~~~~~~~------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~~~i~~~ss-~~~~~~~~~~~  147 (242)
T d1ulsa_          81 VVHYAGITRDNFHWK------MPLEDWELVLRVNLTGSFLVAKAASEAMREKN------PGSIVLTAS-RVYLGNLGQAN  147 (242)
T ss_dssp             EEECCCCCCCCCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC------CEEEEEECC-GGGGCCTTCHH
T ss_pred             EEECCcccccCchhh------Ccchhhhccccccchhhhhhhhhccccccccc------cceeeeecc-ccccCCCCCcc
Confidence            999999987776666      89999999999999999999999999998876      566766666 56788889999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |+++|+|+.+|+|++|.|++++|||||+|+||+++|++.+...++..+...+..|. +|+.+|||+|+.+.||++  +.+
T Consensus       148 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl-~R~~~pedia~~v~fL~S~~s~~  226 (242)
T d1ulsa_         148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSF  226 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhchhhCC
Confidence            99999999999999999999999999999999999999988888888888889999 999999999999999997  479


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      +|||+|.+|||+++
T Consensus       227 itG~~i~vDGG~t~  240 (242)
T d1ulsa_         227 ITGQVLFVDGGRTI  240 (242)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CCCcEEEECCCccC
Confidence            99999999999986

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.9e-57  Score=364.77  Aligned_cols=239  Identities=32%  Similarity=0.524  Sum_probs=219.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.+++||++|+++++++++++.+++|
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999999998887766554    67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~  156 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++|.++|.|.+++      .|+||+++|..+. .+.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~------~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~G~Ii~i~S~~~~~~~~  150 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEE------FPLDEFRQVIEVNLFGTYYVCREAFSLLRESD------NPSIINIGSLTVEEVTM  150 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS------SCEEEEECCGGGTCCCS
T ss_pred             CCCEEEECCCCCCCCChhh------CCHHHHHHHHHhhhhhhhhhhhhhhhcccccc------cccccccccchhccccC
Confidence            9999999999877776666      89999999999999999999999999999887      7999999997764 467


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      ++...|+++|+|+.+|+|++|.|++++|||||+|+||+++|++.+..  .++..+.+.+..|+ +|+.+|||+|+.++||
T Consensus       151 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL  229 (251)
T d1vl8a_         151 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL-GRTGVPEDLKGVAVFL  229 (251)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT-SSCBCGGGGHHHHHHH
T ss_pred             ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            78889999999999999999999999999999999999999998654  24566777788898 9999999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.++|||+|.+|||+|-
T Consensus       230 ~S~~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         230 ASEEAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCchhCCCcCcEEEeCcCeeC
Confidence            97  47999999999999973

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=5.8e-58  Score=370.26  Aligned_cols=239  Identities=32%  Similarity=0.508  Sum_probs=221.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..++++.++.+++||++|+++++++++++.+++|++|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            68999999999999999999999999999999999999999999999889999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|.++|.|.+++      .|+||++||..+..+.++...
T Consensus        83 lVnnAg~~~~~~~~~------~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~------~G~II~isS~~~~~~~~~~~~  150 (254)
T d1hdca_          83 LVNNAGISTGMFLET------ESVERFRKVVEINLTGVFIGMKTVIPAMKDAG------GGSIVNISSAAGLMGLALTSS  150 (254)
T ss_dssp             EEECCCCCCCSCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCTTCHH
T ss_pred             EEecCcccccccccc------ccccccchhhhHHhhHHHHHHHHHHHHHhhcC------CCeecccccchhcccccchhh
Confidence            999999987777666      89999999999999999999999999999887      799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHhc--CC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLG-HPDEFAQLVQSIIT--NP  238 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~~--~~  238 (254)
                      |++||+|+.+|+|+||.|++++|||||+|+||+++|++.....++..+...+..|+ +|+. .|||+|+.++||++  +.
T Consensus       151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl-~R~g~~PedvA~~v~fL~S~~a~  229 (254)
T d1hdca_         151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPM-GRVGNEPGEIAGAVVKLLSDTSS  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTT-SSCB-CHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHHhchhhC
Confidence            99999999999999999999999999999999999998765444334444556777 8886 69999999999997  47


Q ss_pred             CcccceEEecCCccc
Q psy12833        239 LINGEVIRIDGALRM  253 (254)
Q Consensus       239 ~~~G~~i~~~gG~~~  253 (254)
                      ++|||+|.+|||+|.
T Consensus       230 ~itG~~i~vDGG~t~  244 (254)
T d1hdca_         230 YVTGAELAVDGGWTT  244 (254)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             CCCCceEEeCCCccC
Confidence            999999999999974

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=8e-57  Score=364.93  Aligned_cols=238  Identities=30%  Similarity=0.481  Sum_probs=217.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.+++||++|+++++++++++.+++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999998888777655     4578899999999999999999999999


Q ss_pred             CCCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         77 GKLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        77 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      |++|++|||||+... .++.+      .+.++|++.+++|+.++++++|+++|.|.++.      .|+||++||..+..+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~------~G~Ii~isS~~~~~~  149 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTES------FTAAEFDKVVSINLRGVFLGLEKVLKIMREQG------SGMVVNTASVGGIRG  149 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCGGGTSB
T ss_pred             CCCCEEEECCcccccCCchhh------hhhhHHHHHhhhhccchhhhhhhhHhhhhhhc------CCCCcccccHhhccC
Confidence            999999999997643 34545      79999999999999999999999999999887      799999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--------hHHHHHHHHhcCCCCCCCCCHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--------NEKVRNFLARSIPAPQRLGHPDEF  227 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~v  227 (254)
                      .|....|+++|+|+.+|+++||.|++++|||||+|+||+++|++.+..        .++..+.+.+..|+ +|+.+|||+
T Consensus       150 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~p~dv  228 (258)
T d1iy8a_         150 IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-KRYGEAPEI  228 (258)
T ss_dssp             CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT-CSCBCHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC-CCCcCHHHH
Confidence            999999999999999999999999999999999999999999987543        23445667778888 999999999


Q ss_pred             HHHHHHHhc--CCCcccceEEecCCcc
Q psy12833        228 AQLVQSIIT--NPLINGEVIRIDGALR  252 (254)
Q Consensus       228 a~~~~~l~~--~~~~~G~~i~~~gG~~  252 (254)
                      |+.++||++  +.++|||+|.+|||+|
T Consensus       229 A~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         229 AAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHhCchhcCCcCceEEcCcchh
Confidence            999999997  4799999999999997

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.9e-57  Score=363.10  Aligned_cols=236  Identities=33%  Similarity=0.507  Sum_probs=213.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ||+||++|||||++|||+++|+.|+++|++|++++|+++.. +..++.+  ..+++||++|+++++++++++.+++|++|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIG--GAFFQVDLEDERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHHT--CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhcCCCC
Confidence            68999999999999999999999999999999999987654 4455553  56789999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....++.+      .+.++|++.+++|+.++++++|+++|+|.+++      .|+||++||..+..+.++..
T Consensus        79 iLVnnAG~~~~~~~~~------~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~------~G~Ii~isS~~~~~~~~~~~  146 (248)
T d2d1ya1          79 VLVNNAAIAAPGSALT------VRLPEWRRVLEVNLTAPMHLSALAAREMRKVG------GGAIVNVASVQGLFAEQENA  146 (248)
T ss_dssp             EEEECCCCCCCBCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT------CEEEEEECCGGGTSBCTTBH
T ss_pred             eEEEeCcCCCCCChhh------CCHHHHHHHHHhhhhhHhhhhhhhcccccccc------cccccccccccccccccccc
Confidence            9999999887766666      89999999999999999999999999999887      79999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .|+++|+|+.+|+|++|.|++++|||||+|+||+++|++....      .++..+.+.+..|+ +|+.+|||+|+.+.||
T Consensus       147 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~pedia~~v~fL  225 (248)
T d2d1ya1         147 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFL  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT-SSCBCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999987542      23344566777888 9999999999999999


Q ss_pred             hc--CCCcccceEEecCCcc
Q psy12833        235 IT--NPLINGEVIRIDGALR  252 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~  252 (254)
                      ++  +.++|||+|.+|||+|
T Consensus       226 ~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         226 ASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hCchhcCCCCcEEEcCcCcc
Confidence            96  4799999999999987

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.3e-56  Score=364.11  Aligned_cols=241  Identities=32%  Similarity=0.463  Sum_probs=218.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++   +.++.+++||++|+++++++++++.+++|
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999999999999865 455555544   67789999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++|.++|.|.+++.     .++|+++||..+..+.|
T Consensus        85 ~iDiLVnnAG~~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-----g~~Iv~isS~~~~~~~~  153 (261)
T d1geea_          85 KLDVMINNAGLENPVSSHE------MSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWP  153 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-----CCEEEEECCGGGTSCCT
T ss_pred             CCCEeeccceecCCcchhh------cCHHHHHHHHHHhcccchhHHHHHhhhhccccc-----cccccccccchhcccCc
Confidence            9999999999987776666      899999999999999999999999999988751     34699999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ....|+++|+|+.+|+|+||.|++++|||||+|+||+++|++....  .++..+.+.+..|+ +|+..|||+|++++||+
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl-~R~~~pediA~~v~fL~  232 (261)
T d1geea_         154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAAWLA  232 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999998654  35566677788898 99999999999999999


Q ss_pred             c--CCCcccceEEecCCcccC
Q psy12833        236 T--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       236 ~--~~~~~G~~i~~~gG~~~~  254 (254)
                      +  +.++|||+|.+|||++|.
T Consensus       233 S~~s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         233 SSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CchhcCCcCCeEEECCCeeCC
Confidence            7  479999999999999974

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=9.3e-57  Score=360.03  Aligned_cols=231  Identities=31%  Similarity=0.511  Sum_probs=209.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.++        ++..++||++|+++++++++++.+++|++|+
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~--------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc--------CceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            68999999999999999999999999999999999877643        5678999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|.++|.|.+++      .++||++||..+..+.++...
T Consensus        77 LVnnAG~~~~~~~~~------~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~g~Iv~isS~~~~~~~~~~~~  144 (237)
T d1uzma1          77 LVSNAGLSADAFLMR------MTEEKFEKVINANLTGAFRVAQRASRSMQRNK------FGRMIFIGSVSGLWGIGNQAN  144 (237)
T ss_dssp             EEEECSCCC-----C------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCCCC-----CCHH
T ss_pred             EEeeecccccccHhh------CCHHHHHHHHHhhhhhhhhhhhhhhhcccccC------CCceEEEcchhhccCCcccHH
Confidence            999999887766666      89999999999999999999999999999987      789999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |++||+|+.+|+|+++.|++++|||||+|+||+++|++.+...+...+...+.+|. +|+.+|||+|+.+.||++  +.+
T Consensus       145 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~  223 (237)
T d1uzma1         145 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLASEDASY  223 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999999988888888888889998 999999999999999997  479


Q ss_pred             cccceEEecCCccc
Q psy12833        240 INGEVIRIDGALRM  253 (254)
Q Consensus       240 ~~G~~i~~~gG~~~  253 (254)
                      +|||+|.+|||.+|
T Consensus       224 itG~~i~vdGG~~m  237 (237)
T d1uzma1         224 ISGAVIPVDGGMGM  237 (237)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCCeEEECCCCCC
Confidence            99999999999986

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.4e-56  Score=361.49  Aligned_cols=239  Identities=27%  Similarity=0.400  Sum_probs=206.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |+||++|||||++|||+++|+.|+++|++|++++|+..+ .++..++.+.++.+++||++|+++++++++++.+++|++|
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999997653 4455566688999999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....++.+      .+.++|++.+++|+.++++++|+++|.|.+++      .|+||++||..+..+.++..
T Consensus        83 ilVnnAG~~~~~~~~~------~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~G~Iv~isS~~~~~~~~~~~  150 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDE------LTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG------WGRIINLTSTTYWLKIEAYT  150 (247)
T ss_dssp             EEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGGSCCSSCH
T ss_pred             EEEECCCCCCCCChHh------CCHHHhhhhheeehhhhhHHHHHHHhHHHhcC------CCCccccccchhcccCcccc
Confidence            9999999987776666      89999999999999999999999999999987      79999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH-HHHHHHhc-CCCCCCCCCHHHHHHHHHHHhc--
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-VRNFLARS-IPAPQRLGHPDEFAQLVQSIIT--  236 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~va~~~~~l~~--  236 (254)
                      .|++||+|+.+|++++|.|++++|||||+|+||+++|++.+....+ ..+..... .|. +|+.+|||+|+.++||++  
T Consensus       151 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l-~r~~~pedvA~~v~fL~S~~  229 (247)
T d2ew8a1         151 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAI-PRLQVPLDLTGAAAFLASDD  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSS-CSCCCTHHHHHHHHHHTSGG
T ss_pred             cchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccC-CCCCCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999998654322 22233232 355 899999999999999997  


Q ss_pred             CCCcccceEEecCCccc
Q psy12833        237 NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 ~~~~~G~~i~~~gG~~~  253 (254)
                      +.|+|||+|.+|||+++
T Consensus       230 s~~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         230 ASFITGQTLAVDGGMVR  246 (247)
T ss_dssp             GTTCCSCEEEESSSCCC
T ss_pred             hcCCcCCeEEECCCEec
Confidence            47999999999999986

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.1e-56  Score=364.55  Aligned_cols=239  Identities=29%  Similarity=0.439  Sum_probs=219.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      .||++|||||++|||+++|++|+++|++|++++|+++++++..+++   +.++.+++||++|+++++++++++.+++|++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4899999999999999999999999999999999999988888766   6789999999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQL--IHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      |++|||||.....++.+      .+.++|++.+++|+.++++++|+++|+  |.++.      .++||+++|..+..+.+
T Consensus        81 DilVnnAG~~~~~~~~~------~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~------~g~Ii~i~S~~~~~~~~  148 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAE------LADELWLDVVETNLTGVFRVTKQVLKAGGMLERG------TGRIVNIASTGGKQGVV  148 (257)
T ss_dssp             SEEEECCCCCCCSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT------EEEEEEECCGGGTSCCT
T ss_pred             CEEEecccccCCCChHH------cCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC------Ccccccccccccccccc
Confidence            99999999987777666      899999999999999999999999996  45554      68999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-----------hHHHHHHHHhcCCCCCCCCCHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-----------NEKVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  226 (254)
                      +...|+++|+|+.+|+|+||.|++++|||||+|+||+++|++.+..           .++..+.+.+.+|+ +|+.+|||
T Consensus       149 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl-gR~~~ped  227 (257)
T d2rhca1         149 HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSE  227 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT-SSCBCHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC-CCCcCHHH
Confidence            9999999999999999999999999999999999999999987553           24455667788898 99999999


Q ss_pred             HHHHHHHHhc--CCCcccceEEecCCcccC
Q psy12833        227 FAQLVQSIIT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       227 va~~~~~l~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      +|+.+.||++  +.++|||+|.+|||++-+
T Consensus       228 ia~~v~fL~S~~s~~itG~~i~vDGG~~~~  257 (257)
T d2rhca1         228 VAEMVAYLIGPGAAAVTAQALNVCGGLGNY  257 (257)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHhCchhcCCcCceEEECcCcccC
Confidence            9999999997  479999999999999753

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=8.2e-57  Score=362.01  Aligned_cols=236  Identities=29%  Similarity=0.496  Sum_probs=219.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEee-CCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCD-LPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++   +.++.+++||++|+++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999875 4555666666554   67899999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.....++.+      .+.++|++.+++|+.++++++|.++|+|.+++      .|+||++||..+..+.++..
T Consensus        82 iLVnnAg~~~~~~~~~------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~G~IVnisS~~~~~~~~~~~  149 (244)
T d1edoa_          82 VVVNNAGITRDTLLIR------MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR------KGRIINIASVVGLIGNIGQA  149 (244)
T ss_dssp             EEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCTHHHHCCTTCH
T ss_pred             ccccccccccccchhc------cchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC------CcEEEEEcChhhcCCCCCCH
Confidence            9999999987777766      89999999999999999999999999999887      79999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh-cC--
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII-TN--  237 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-~~--  237 (254)
                      .|+++|+|+.+|+|+|+.|++++|||||+|+||+++|++.+...++..+.+.+..|. +|+.+|||+|+.+.||+ ++  
T Consensus       150 ~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl-~R~~~p~dvA~~v~fLa~S~~a  228 (244)
T d1edoa_         150 NYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTT-CSCBCHHHHHHHHHHHHHCSGG
T ss_pred             HHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHHCCchh
Confidence            999999999999999999999999999999999999999988888888888889998 99999999999999997 53  


Q ss_pred             CCcccceEEecCCccc
Q psy12833        238 PLINGEVIRIDGALRM  253 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~~  253 (254)
                      .++|||+|.+|||++|
T Consensus       229 ~~itG~~i~vdGG~si  244 (244)
T d1edoa_         229 SYITGQAFTIDGGIAI  244 (244)
T ss_dssp             GGCCSCEEEESTTTTC
T ss_pred             cCCcCCeEEeCCCeeC
Confidence            6999999999999986

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.4e-56  Score=362.43  Aligned_cols=239  Identities=26%  Similarity=0.421  Sum_probs=220.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC-
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG-   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-   77 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.+++||++|+++++++++++.++++ 
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999999998888776   56788999999999999999999999986 


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++|.++|.|.++.      .|+||++||..+..+.|
T Consensus        86 ~idilvnnAG~~~~~~~~~------~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~G~Ii~isS~~~~~~~~  153 (259)
T d2ae2a_          86 KLNILVNNAGIVIYKEAKD------YTVEDYSLIMSINFEAAYHLSVLAHPFLKASE------RGNVVFISSVSGALAVP  153 (259)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS------SEEEEEECCGGGTSCCT
T ss_pred             CceEEEECCceeccCcccc------CCHHHHHHHHhcccceeEEEEeeccchhhhhc------ccccccccccccccccc
Confidence            7999999999887777666      89999999999999999999999999999987      79999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch-----HHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-----EKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      +...|+++|+|+.+|+|++|.|++++|||||+|+||+++|++.+...     ++..+.+.+..|+ +|+.+|||+|+.++
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~pedvA~~v~  232 (259)
T d2ae2a_         154 YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-RRMGEPKELAAMVA  232 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT-CSCBCHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999875432     2344556677888 99999999999999


Q ss_pred             HHhc--CCCcccceEEecCCccc
Q psy12833        233 SIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       233 ~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ||++  +.++|||+|.+|||++.
T Consensus       233 fL~S~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         233 FLCFPAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhCCCcCcEEEECCCeEe
Confidence            9997  47999999999999874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-56  Score=361.27  Aligned_cols=237  Identities=27%  Similarity=0.442  Sum_probs=219.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++.+++||++|+++++++++++.+++|+
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999999988888776   678999999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||.....++ +      .+.++|++.+++|+.++++++|.+.|+|.+++      .++||++||..+..+.++
T Consensus        89 iDilvnnAG~~~~~~~-e------~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~g~Ii~isS~~~~~~~~~  155 (255)
T d1fmca_          89 VDILVNNAGGGGPKPF-D------MPMADFRRAYELNVFSFFHLSQLVAPEMEKNG------GGVILTITSMAAENKNIN  155 (255)
T ss_dssp             CCEEEECCCCCCCCCT-T------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTCCCTT
T ss_pred             CCEeeeCCcCCCCCcc-c------CCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc------ccccccccccchhccccc
Confidence            9999999998755433 3      78999999999999999999999999999987      789999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-  236 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-  236 (254)
                      ...|+++|+|+.+|+|++|.|++++|||||+|+||+++|++.... .++..+.+.+..|. +|+.+|||+|++++||++ 
T Consensus       156 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl-~R~g~pedvA~~v~fL~S~  234 (255)
T d1fmca_         156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI-RRLGQPQDIANAALFLCSP  234 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS-CSCBCHHHHHHHHHHHHSG
T ss_pred             cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999999999987553 56667778888998 999999999999999997 


Q ss_pred             -CCCcccceEEecCCcc
Q psy12833        237 -NPLINGEVIRIDGALR  252 (254)
Q Consensus       237 -~~~~~G~~i~~~gG~~  252 (254)
                       +.|+|||+|.+|||..
T Consensus       235 ~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         235 AASWVSGQILTVSGGGV  251 (255)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             hhcCCcCCEEEECcCcc
Confidence             4799999999999964

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-56  Score=360.20  Aligned_cols=237  Identities=32%  Similarity=0.478  Sum_probs=215.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++ ++.++.||++|+++++++++++.+++|++|+
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-CCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999999999999999999999999998888764 6789999999999999999999999999999


Q ss_pred             EEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         82 NVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      +|||||.... .++.+      .+.++|++.+++|+.++++++|+++|.|.++       .|+||++||..+..+.+...
T Consensus        83 lVnnAG~~~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-------~G~Ii~isS~~~~~~~~~~~  149 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEE------TSAQGFRQLLELNLLGTYTLTKLALPYLRKS-------QGNVINISSLVGAIGQAQAV  149 (250)
T ss_dssp             EEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCHHHHHCCTTCH
T ss_pred             EEeccccccccccccc------ccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-------CCCCcccccccccccccCcc
Confidence            9999997643 33444      7999999999999999999999999999865       58999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .|+++|+|+.+|+|+||.|++++|||||+|+||+++|++.+..      .++..+......|+ +|+.+|||+|+++.||
T Consensus       150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~p~eva~~v~fL  228 (250)
T d1ydea1         150 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL-GRMGQPAEVGAAAVFL  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT-SSCBCHHHHHHHHHHH
T ss_pred             hhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999987543      23344555566788 9999999999999999


Q ss_pred             hc-CCCcccceEEecCCccc
Q psy12833        235 IT-NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~-~~~~~G~~i~~~gG~~~  253 (254)
                      ++ +.++|||+|.+|||++|
T Consensus       229 ~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         229 ASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHCTTCCSCEEEESTTTTS
T ss_pred             hCccCCCcCCeEEECCCccc
Confidence            96 57999999999999986

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.5e-57  Score=365.67  Aligned_cols=239  Identities=28%  Similarity=0.418  Sum_probs=190.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc-C
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF-G   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~   77 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+++++++..+++   +.++.++.||++|+++++++++++.+++ |
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999999998888776   5678999999999999999999999998 6


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++|.++|.|.+++      .|+||++||..+..+.+
T Consensus        86 ~idilvnnAG~~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~------~G~Iv~isS~~~~~~~~  153 (259)
T d1xq1a_          86 KLDILINNLGAIRSKPTLD------YTAEDFSFHISTNLESAYHLSQLAHPLLKASG------CGNIIFMSSIAGVVSAS  153 (259)
T ss_dssp             CCSEEEEECCC------CC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS------SCEEEEEC---------
T ss_pred             CcccccccccccCCCchhh------CCHHHHHHHHHHHhhhheeeehhhhhcccccc------ccccccccccccccccc
Confidence            8999999999887776666      89999999999999999999999999999887      79999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      +...|+++|+|+.+|+|++|.|++++|||||+|+||+++|++.+.. .++..+...+..|+ +|+.+|||+|+.++||++
T Consensus       154 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S  232 (259)
T d1xq1a_         154 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL-GRFGEPEEVSSLVAFLCM  232 (259)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTS
T ss_pred             ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999998764 34455666777888 999999999999999996


Q ss_pred             --CCCcccceEEecCCccc
Q psy12833        237 --NPLINGEVIRIDGALRM  253 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~~  253 (254)
                        +.++|||+|.+|||+++
T Consensus       233 ~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         233 PAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             GGGTTCCSCEEECCCCEEE
T ss_pred             chhcCCcCcEEEeCCCEEC
Confidence              47999999999999986

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3.3e-56  Score=360.08  Aligned_cols=239  Identities=29%  Similarity=0.456  Sum_probs=217.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++  +.++.+++||++|+++++++++++.+++|++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            68999999999999999999999999999999999999999888887  4578899999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||.....++.+      .+.++|++.+++|+.++++++|+++|.|.+++.     .++||++||..+..+.|..
T Consensus        84 DiLVnnAg~~~~~~~~~------~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~-----gg~Ii~isS~~~~~~~~~~  152 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEE------TTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL-----GASIINMSSIEGFVGDPSL  152 (251)
T ss_dssp             CEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS-----CEEEEEECCGGGTSCCTTC
T ss_pred             eEEEeccccccccchhc------ccccchhhhccccccccchhHHHHHHHHHhcCC-----CCceEeeeccceeccCCCc
Confidence            99999999987766666      899999999999999999999999999988751     3589999999999999999


Q ss_pred             ccchhchHHHHHhHHHHHHH--hccCCcEEEEEecCCccccccccch-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        160 VAYSASKSGIVGMTLPMARD--LAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e--~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      ..|+++|+|+.+|++++|.|  +.++|||||+|+||+++|++.+... ++.........|+ +|+.+|||+|+.++||++
T Consensus       153 ~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S  231 (251)
T d1zk4a1         153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM-GHIGEPNDIAYICVYLAS  231 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTT-SSCBCHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999  5688999999999999999987653 3333444456777 999999999999999997


Q ss_pred             --CCCcccceEEecCCcc
Q psy12833        237 --NPLINGEVIRIDGALR  252 (254)
Q Consensus       237 --~~~~~G~~i~~~gG~~  252 (254)
                        +.++|||+|.+|||+|
T Consensus       232 ~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         232 NESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             chhCCCcCcEEEECcccc
Confidence              4799999999999997

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.8e-55  Score=356.76  Aligned_cols=237  Identities=30%  Similarity=0.447  Sum_probs=216.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++   +.++.+++||++|+++++++++++.+++|++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            67899999999999999999999999999999999988887766   678999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||+....++.+      .+.++|++.+++|+.++++++|+++|+|.++..     .++|+++||..+..+.|+...
T Consensus        82 lVnnAG~~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-----~g~Iv~isS~~~~~~~~~~~~  150 (255)
T d1gega_          82 IVNNAGVAPSTPIES------ITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-----GGKIINACSQAGHVGNPELAV  150 (255)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-----CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEecccccccCcHHH------hhhhhhhhhhhhcccchhhhhhhhcchhhhhcc-----ccccccccchhhcccCccccc
Confidence            999999987777666      899999999999999999999999998877641     588999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH-----------HHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-----------VRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      |+++|+|+.+|+|+||.|++++|||||+|+||+++|+++....+.           ..+.+.+.+|+ +|+.+|||+|+.
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~peevA~~  229 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAAC  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT-CSCBCHHHHHHH
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            999999999999999999999999999999999999987654322           23455677888 999999999999


Q ss_pred             HHHHhc--CCCcccceEEecCCccc
Q psy12833        231 VQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +.||++  +.++|||.|.+|||+.|
T Consensus       230 v~fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         230 VSYLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHhCchhCCccCcEEEecCCEEe
Confidence            999997  47999999999999875

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.1e-55  Score=357.30  Aligned_cols=236  Identities=32%  Similarity=0.464  Sum_probs=216.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++   +.++.+++||++|+++++++++++.+++|+
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999999888887766   667899999999999999999999999999


Q ss_pred             CcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         79 LDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        79 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      +|++|||||.... .++.+      .+.++|++.+++|+.++++++|+++|.|.+++      .|+||++||..+..+.|
T Consensus        83 iDilVnnaG~~~~~~~~~~------~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~------~G~II~isS~~~~~~~~  150 (260)
T d1zema1          83 IDFLFNNAGYQGAFAPVQD------YPSDDFARVLTINVTGAFHVLKAVSRQMITQN------YGRIVNTASMAGVKGPP  150 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCHHHHSCCT
T ss_pred             CCeehhhhccccccCcccc------ccHHHHHhhccccccccccchhhHHhhhhhhc------CCCCCeeechhhccCCc
Confidence            9999999997644 44555      89999999999999999999999999999887      79999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----------------hHHHHHHHHhcCCCCCCC
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----------------NEKVRNFLARSIPAPQRL  221 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----------------~~~~~~~~~~~~~~~~~~  221 (254)
                      ....|+++|+|+.+|+|++|.|++++|||||+|+||+++|++....                .+...+.+.+.+|+ +|+
T Consensus       151 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~  229 (260)
T d1zema1         151 NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRY  229 (260)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-SSC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC-CCC
Confidence            9999999999999999999999999999999999999999976332                23455667778898 999


Q ss_pred             CCHHHHHHHHHHHhc--CCCcccceEEecCC
Q psy12833        222 GHPDEFAQLVQSIIT--NPLINGEVIRIDGA  250 (254)
Q Consensus       222 ~~~~~va~~~~~l~~--~~~~~G~~i~~~gG  250 (254)
                      .+|||+|..+.||++  +.++|||+|.+|||
T Consensus       230 g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         230 GDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             BCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             cCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            999999999999997  47999999999998

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.1e-55  Score=357.25  Aligned_cols=243  Identities=27%  Similarity=0.416  Sum_probs=204.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++      ..++.+++||++|+++++++++++.++
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999998888776      235889999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc-ccc
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA-AYE  154 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~-~~~  154 (254)
                      +|++|++|||||...+.....  ...+.+.++|++.+++|+.++++++|.++|+|.++.       +.+|+++|.. +..
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~--~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-------g~iI~~~S~~~~~~  153 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSK--TGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-------GEIVNISSIASGLH  153 (264)
T ss_dssp             HSCCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEECCTTSSSS
T ss_pred             hCCCCEeecccccccCCcccc--ccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-------Ccceeeeeeccccc
Confidence            999999999999865443322  122368899999999999999999999999998774       6666666655 578


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---------HHHHHHHHhcCCCCCCCCCHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---------EKVRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  225 (254)
                      +.|....|+++|+|+.+|+|+||.|++++|||||+|+||+++|++.....         .+..+.+.+.+|+ +|+.+||
T Consensus       154 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pe  232 (264)
T d1spxa_         154 ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQ  232 (264)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-SSCBCHH
T ss_pred             cCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC-CCCcCHH
Confidence            89999999999999999999999999999999999999999999875431         1223445667888 9999999


Q ss_pred             HHHHHHHHHhc---CCCcccceEEecCCcccC
Q psy12833        226 EFAQLVQSIIT---NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       226 ~va~~~~~l~~---~~~~~G~~i~~~gG~~~~  254 (254)
                      |+|+.+.||++   +.|+|||+|.+|||++|+
T Consensus       233 dvA~~v~fL~S~~~s~~itG~~i~vDGG~slv  264 (264)
T d1spxa_         233 DIAEVIAFLADRKTSSYIIGHQLVVDGGSSLI  264 (264)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCCcccCCccCceEEeCCChhhC
Confidence            99999999997   368999999999999986

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2e-55  Score=353.39  Aligned_cols=237  Identities=30%  Similarity=0.479  Sum_probs=215.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..++++.++.+++||++|+++++++++++.+++|++|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|.+.+++|+.+++.++|.+.|.|.++        +.++++|| .+..+.|++..
T Consensus        83 LinnAg~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--------~~i~~~ss-~a~~~~~~~~~  147 (241)
T d2a4ka1          83 VAHFAGVAHSALSWN------LPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--------GSLVLTGS-VAGLGAFGLAH  147 (241)
T ss_dssp             EEEGGGGTTTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--------CEEEEECC-CTTCCHHHHHH
T ss_pred             eccccccccccchhh------hhccccccccccccccccccccccccccccc--------cceeeccc-cccccccCccc
Confidence            999999877666666      8999999999999999999999999987653        45555554 45556678899


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~  239 (254)
                      |+++|+|+++|+++||+|++++|||||+|+||+++|++.+...++..+.+.+..|. +|+..|||+|++++||++  +.+
T Consensus       148 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~fL~S~~s~~  226 (241)
T d2a4ka1         148 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAY  226 (241)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             cchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCC-CCCcCHHHHHHHHHHHhcchhCC
Confidence            99999999999999999999999999999999999999988888888888888998 999999999999999997  479


Q ss_pred             cccceEEecCCcccC
Q psy12833        240 INGEVIRIDGALRMI  254 (254)
Q Consensus       240 ~~G~~i~~~gG~~~~  254 (254)
                      +|||+|.+|||+|++
T Consensus       227 itG~~i~vDGG~s~~  241 (241)
T d2a4ka1         227 ITGQALYVDGGRSIV  241 (241)
T ss_dssp             CCSCEEEESTTTTTC
T ss_pred             CcCceEEeCCCcccC
Confidence            999999999999986

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.2e-54  Score=352.93  Aligned_cols=241  Identities=26%  Similarity=0.393  Sum_probs=219.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.+++||++|+++++++++++.+++|
T Consensus         7 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999999999999999887766654    77899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC--
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--  155 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~--  155 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++|.+.|.|.++..     .+.|++++|......  
T Consensus        87 ~iDilVnnAg~~~~~~~~~------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~-----~g~i~~~~s~~~~~~~~  155 (260)
T d1h5qa_          87 PISGLIANAGVSVVKPATE------LTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-----KGSIVVTSSMSSQIINQ  155 (260)
T ss_dssp             SEEEEEECCCCCCCSCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCGGGTSCCE
T ss_pred             CCcEecccccccccCCHHH------hccccccccccccccchhhhhhhhccccccccc-----ceEEEEeeccccccccc
Confidence            9999999999987776666      899999999999999999999999999865541     578888877765543  


Q ss_pred             -----CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        156 -----QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       156 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                           .++...|+++|+|+.+|+|++|.|++++|||||+|+||+++|++.....++..+...+.+|. +|+.+|||+|+.
T Consensus       156 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl-~R~g~pedvA~~  234 (260)
T d1h5qa_         156 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPL-NRFAQPEEMTGQ  234 (260)
T ss_dssp             EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTT-SSCBCGGGGHHH
T ss_pred             cccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence                 35678999999999999999999999999999999999999999988888888888899999 999999999999


Q ss_pred             HHHHhc--CCCcccceEEecCCcccC
Q psy12833        231 VQSIIT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       231 ~~~l~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      +.||++  +.++|||+|.+|||++++
T Consensus       235 v~fL~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         235 AILLLSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             HHHHhcchhCCCcCceEEECCCeecC
Confidence            999997  479999999999999885

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.2e-55  Score=357.83  Aligned_cols=243  Identities=25%  Similarity=0.383  Sum_probs=210.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++      +.++.+++||++|+++++++++++.++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999998888876      235789999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec-ccccc
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS-IAAYE  154 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss-~~~~~  154 (254)
                      +|++|++|||||.....++..  ...+.+.++|++.+++|+.++++++|+++|+|.++.       +.+|+++| .++..
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~--~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-------g~iI~~~Ss~a~~~  153 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGT--TGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-------GEIVNVSSIVAGPQ  153 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCC--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEECCGGGSSS
T ss_pred             hCCceEEEeCCcccCcccccc--cchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-------Cccccccchhcccc
Confidence            999999999999876554432  122368889999999999999999999999998874       45555555 67788


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch------HH---HHHHHHhcCCCCCCCCCHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EK---VRNFLARSIPAPQRLGHPD  225 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~  225 (254)
                      +.++...|+++|+|+.+|+|+||.|++++|||||+|+||+++|++.....      +.   ..+...+.+|+ +|+.+||
T Consensus       154 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~pe  232 (272)
T d1xkqa_         154 AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPE  232 (272)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHH
T ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-CCCcCHH
Confidence            99999999999999999999999999999999999999999999875431      11   12223345777 9999999


Q ss_pred             HHHHHHHHHhcC---CCcccceEEecCCcccC
Q psy12833        226 EFAQLVQSIITN---PLINGEVIRIDGALRMI  254 (254)
Q Consensus       226 ~va~~~~~l~~~---~~~~G~~i~~~gG~~~~  254 (254)
                      |+|+.+.||+++   .|+|||+|.+|||++|+
T Consensus       233 diA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         233 HIANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            999999999972   58999999999999985

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.5e-55  Score=357.91  Aligned_cols=242  Identities=22%  Similarity=0.383  Sum_probs=213.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+++++++..+++      ..++.++.||++|+++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999988888776      235789999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      +|++|++|||||.....+...    .+.+.++|++.+++|+.++++++|++.|.|.+++      .++|+++||.++..+
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~----~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~------~g~ii~~ss~~~~~~  151 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTAN----TDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK------GEIVNVSSIVAGPQA  151 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCG----GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEECCGGGSSSC
T ss_pred             cCCceEEEeeccccccccccc----ccCCHHHHHHHHhhcccccccccccccccccccc------cccccchhhhhcccc
Confidence            999999999999754433221    1268899999999999999999999999999876      789999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch------HHHHHH---HHhcCCCCCCCCCHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN------EKVRNF---LARSIPAPQRLGHPDE  226 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~  226 (254)
                      .++...|+++|+|+.+|+|++|.|++++|||||+|+||+++|++.....      +...+.   ..+.+|. +|+.+|||
T Consensus       152 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-gR~g~ped  230 (274)
T d1xhla_         152 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEE  230 (274)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHH
T ss_pred             CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-CCCcCHHH
Confidence            9999999999999999999999999999999999999999999865431      222222   2345687 99999999


Q ss_pred             HHHHHHHHhc---CCCcccceEEecCCcccC
Q psy12833        227 FAQLVQSIIT---NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       227 va~~~~~l~~---~~~~~G~~i~~~gG~~~~  254 (254)
                      +|+.++||++   +.|+|||+|.+|||++|+
T Consensus       231 iA~~v~fL~S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         231 IANIIVFLADRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHcCCccccCccCcEEEeCcCHHHh
Confidence            9999999996   369999999999999985

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.9e-54  Score=350.93  Aligned_cols=239  Identities=30%  Similarity=0.450  Sum_probs=216.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc-C
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF-G   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~   77 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+++++++..+++   +.+++++.||++|+++++++++++.+.+ +
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999998888877765   6778899999999999999999999998 5


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++.+      .+.++|.+.+++|+.+++++++++.|.|.++.      .|+||++||.++..+.+
T Consensus        84 ~idilinnag~~~~~~~~~------~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~------~g~ii~isS~~~~~~~~  151 (258)
T d1ae1a_          84 KLNILVNNAGVVIHKEAKD------FTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ------NGNVIFLSSIAGFSALP  151 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------SEEEEEECCGGGTSCCT
T ss_pred             CcEEEeccccccccCcccc------CCHHHHhhhhhhcccccccccccccccccccc------ccccccccccccccccc
Confidence            8999999999887766666      89999999999999999999999999999987      89999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      ....|+++|+|+++|+|.+|.|++++|||||+|+||+++|++....      .++..+.+.+..|+ +|+++|||+|+++
T Consensus       152 ~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-gR~~~pediA~~v  230 (258)
T d1ae1a_         152 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-GRAGKPQEVSALI  230 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-CSCBCHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999999999987543      34556677778898 9999999999999


Q ss_pred             HHHhc--CCCcccceEEecCCccc
Q psy12833        232 QSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       232 ~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +||++  +.++|||+|.+|||++.
T Consensus       231 ~fL~S~~s~~itG~~i~vDGG~s~  254 (258)
T d1ae1a_         231 AFLCFPAASYITGQIIWADGGFTA  254 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhChhhCCCcCcEEEeCCCeec
Confidence            99996  47999999999999985

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=3.5e-54  Score=351.77  Aligned_cols=241  Identities=30%  Similarity=0.504  Sum_probs=211.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.  .++.+++||++|+++++++++++.+++|++
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            689999999999999999999999999999999999999999998883  457889999999999999999999999999


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||||.....+.    ...+.+.++|++.+++|+.++++++|.++|+|.+++      .|+||++||..+..+.++.
T Consensus        84 D~lVnnAG~~~~~~~----~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~------~g~ii~iss~~~~~~~~~~  153 (268)
T d2bgka1          84 DIMFGNVGVLSTTPY----SILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK------KGSIVFTASISSFTAGEGV  153 (268)
T ss_dssp             CEEEECCCCCCSSCS----STTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT------CEEEEEECCGGGTCCCTTS
T ss_pred             ceeccccccccCCCc----ccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC------CCCcccccccccccccccc
Confidence            999999998654431    112279999999999999999999999999999887      7999999999999876654


Q ss_pred             -ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHH-HHHHHHhc-CCCCCCCCCHHHHHHHHHH
Q psy12833        160 -VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEK-VRNFLARS-IPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       160 -~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~-~~~~~~~~-~~~~~~~~~~~~va~~~~~  233 (254)
                       ..|+++|+|+.+|+|++|.|++++|||||+|+||+++|++....   .++ ..+..... .|. +|+.+|||+|+.++|
T Consensus       154 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-gr~~~pedvA~~v~f  232 (268)
T d2bgka1         154 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLK-GTLLRAEDVADAVAY  232 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSC-SCCCCHHHHHHHHHH
T ss_pred             ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccC-CCCcCHHHHHHHHHH
Confidence             48999999999999999999999999999999999999987653   222 22222222 344 899999999999999


Q ss_pred             Hhc--CCCcccceEEecCCccc
Q psy12833        234 IIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |++  +.++|||+|.+|||+|.
T Consensus       233 L~S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         233 LAGDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhChhhCCccCceEEECcCccc
Confidence            997  47999999999999985

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.1e-55  Score=354.61  Aligned_cols=237  Identities=32%  Similarity=0.432  Sum_probs=213.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++.+..+++||++|+++++++++++.+++|++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|.++|.|+++       .|+||++||..+..+.+....
T Consensus        84 lVnnAG~~~~~~~~~------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-------~G~Iv~isS~~~~~~~~~~~~  150 (253)
T d1hxha_          84 LVNNAGILLPGDMET------GRLEDFSRLLKINTESVFIGCQQGIAAMKET-------GGSIINMASVSSWLPIEQYAG  150 (253)
T ss_dssp             EEECCCCCCCBCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-------CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEecccccCCCCccc------CCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-------CCceecccchhhhcCcccccc
Confidence            999999887666655      8999999999999999999999999999654       599999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhcc--CCcEEEEEecCCccccccccch-----HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAG--AGIRVNTIAPGLFDTPLLSMLN-----EKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |+++|+|+.+|+|++|.|+++  +|||||+|+||+++|++.+...     ++.........|. +|..+|||+|+.++||
T Consensus       151 Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-gr~~~pedvA~~v~fL  229 (253)
T d1hxha_         151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRA-GRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTT-CCEECHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCcccccc-CCCCCHHHHHHHHHHH
Confidence            999999999999999999987  4699999999999999875421     1211112223344 7899999999999999


Q ss_pred             hc--CCCcccceEEecCCcc
Q psy12833        235 IT--NPLINGEVIRIDGALR  252 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~  252 (254)
                      ++  +.++|||+|.+|||+.
T Consensus       230 ~S~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         230 ASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             HSGGGTTCCSCEEEESSSCT
T ss_pred             hChhhCCCcCcEEEECccHh
Confidence            97  4799999999999986

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-54  Score=347.27  Aligned_cols=234  Identities=24%  Similarity=0.354  Sum_probs=213.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.++++++.+++. ++.++.||++|++++++++    +++|++|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~~~~~v~~~~----~~~g~iDi   77 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGDWDATEKAL----GGIGPVDL   77 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHH----TTCCCCSE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHH----HHcCCCeE
Confidence            689999999999999999999999999999999999999998888874 6889999999999887665    45799999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|.+.|.|.+++.     .|+||+++|..+..+.|+...
T Consensus        78 lVnnAg~~~~~~~~~------~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-----~g~ii~isS~~~~~~~~~~~~  146 (242)
T d1cyda_          78 LVNNAALVIMQPFLE------VTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-----PGSIVNVSSMVAHVTFPNLIT  146 (242)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEECCccccchhHHH------HHHHHHHHHHHHHhccchHHHHHhchhhhhhcc-----cCcccccchhhccccCCcccc
Confidence            999999987777766      899999999999999999999999998765431     689999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--C
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--N  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~  237 (254)
                      |+++|+|+.+|+|++|.|++++|||||+|+||+++|++.+..  .++..+.+.+..|+ +|+.+|||+|+.+.||++  +
T Consensus       147 Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl-~R~~~peeva~~v~fL~S~~s  225 (242)
T d1cyda_         147 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL-RKFAEVEDVVNSILFLLSDRS  225 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999987654  35666777788898 999999999999999997  4


Q ss_pred             CCcccceEEecCCcc
Q psy12833        238 PLINGEVIRIDGALR  252 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~  252 (254)
                      .++|||+|.+|||++
T Consensus       226 ~~itG~~i~vDGG~~  240 (242)
T d1cyda_         226 ASTSGGGILVDAGYL  240 (242)
T ss_dssp             TTCCSSEEEESTTGG
T ss_pred             cCcCCceEEeCcchh
Confidence            799999999999986

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-54  Score=358.28  Aligned_cols=240  Identities=28%  Similarity=0.418  Sum_probs=216.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--------CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--------GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++        +.++.+++||++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999888877765        457889999999999999999999


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      .+.+|++|++|||||.....++.+      .+.++|++.+++|+.++++++|+++|.|.+++      .++||++|| .+
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~------~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~------~g~Ii~~ss-~~  155 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEH------ISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH------GGSIVNIIV-PT  155 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH------CEEEEEECC-CC
T ss_pred             HHHhCCeEEEEeeccccccCchhh------hhhhhhhhhhcccccchhhHHHHHHHhhcccc------ccccccccc-cc
Confidence            999999999999999887777666      89999999999999999999999999999887      788888865 45


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----hHHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      ..+.|....|+++|+|+.+|+|++|.|++++|||||+|+||+++|++....    .++..+...+.+|. +|+.+|||+|
T Consensus       156 ~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl-gR~g~pedvA  234 (297)
T d1yxma1         156 KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPEEVS  234 (297)
T ss_dssp             TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT-SSCBCTHHHH
T ss_pred             cccccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC-CCCcCHHHHH
Confidence            677888999999999999999999999999999999999999999986432    23444555667888 9999999999


Q ss_pred             HHHHHHhc--CCCcccceEEecCCcccC
Q psy12833        229 QLVQSIIT--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       229 ~~~~~l~~--~~~~~G~~i~~~gG~~~~  254 (254)
                      +.++||++  +.++|||+|.+|||++|+
T Consensus       235 ~~v~fL~Sd~s~~iTG~~i~VDGG~sl~  262 (297)
T d1yxma1         235 SVVCFLLSPAASFITGQSVDVDGGRSLY  262 (297)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhCchhcCcCCcEEEeCcChhhh
Confidence            99999997  479999999999999974

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-54  Score=346.28  Aligned_cols=234  Identities=22%  Similarity=0.351  Sum_probs=212.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+.++.+|++|++++++++    ++++++|+
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~d~~~v~~~~----~~~g~iDi   79 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERAL----GSVGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHH----TTCCCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHH----HHhCCceE
Confidence            799999999999999999999999999999999999999999888874 5889999999999887766    45789999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|.++|.|.+++.     .|+|+++||..+..+.|....
T Consensus        80 lVnnAg~~~~~~~~~------~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-----~g~Ii~isS~~~~~~~~~~~~  148 (244)
T d1pr9a_          80 LVNNAAVALLQPFLE------VTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-----PGAIVNVSSQCSQRAVTNHSV  148 (244)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-----CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEeccccccccchhh------hhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC-----cceEeecccccccccccchhh
Confidence            999999987777766      899999999999999999999999997654421     699999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--C
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--N  237 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~  237 (254)
                      |+++|+|+.+|+|++|.|++++|||||+|+||+++|++.+..  .++..+.+.+.+|+ +|+.+|||+|+.+.||++  +
T Consensus       149 Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl-~R~~~peevA~~v~fL~S~~a  227 (244)
T d1pr9a_         149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL-GKFAEVEHVVNAILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999987654  34455667778898 999999999999999997  4


Q ss_pred             CCcccceEEecCCcc
Q psy12833        238 PLINGEVIRIDGALR  252 (254)
Q Consensus       238 ~~~~G~~i~~~gG~~  252 (254)
                      .++|||+|.+|||++
T Consensus       228 ~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         228 GMTTGSTLPVEGGFW  242 (244)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             CCcCCcEEEECccHh
Confidence            799999999999997

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=8.1e-54  Score=350.76  Aligned_cols=242  Identities=29%  Similarity=0.383  Sum_probs=214.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.++++++.++++.++..+.+|++|+++++++++++.++++++|+
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            78999999999999999999999999999999999999999999999889999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.......... ...+.+.++|++.+++|+.++++++|.++|.|.++       .|+||+++|..+..+.++...
T Consensus        83 lvnnAG~~~~~~~~~~-~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-------~g~iI~i~S~~~~~~~~~~~~  154 (276)
T d1bdba_          83 LIPNAGIWDYSTALVD-LPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-------RGNVIFTISNAGFYPNGGGPL  154 (276)
T ss_dssp             EECCCCCCCTTCCGGG-SCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEECCGGGTSTTSSCHH
T ss_pred             ccccccccCCCCcccc-ccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-------CCCceeeeechhccCCCCCch
Confidence            9999998655433221 11224556899999999999999999999999876       489999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc----------hHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----------NEKVRNFLARSIPAPQRLGHPDEFAQLV  231 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (254)
                      |+++|+|+.+|+|++|.|+++. ||||+|+||+++|++....          .++..+.+.+.+|. +|+.+|||+|+.+
T Consensus       155 Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peeva~~v  232 (276)
T d1bdba_         155 YTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-GRMPEVEEYTGAY  232 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT-SSCCCGGGGSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            9999999999999999999875 9999999999999976432          12344566677888 9999999999999


Q ss_pred             HHHhc---CCCcccceEEecCCccc
Q psy12833        232 QSIIT---NPLINGEVIRIDGALRM  253 (254)
Q Consensus       232 ~~l~~---~~~~~G~~i~~~gG~~~  253 (254)
                      +||++   +.|+|||.|.||||+++
T Consensus       233 ~fL~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         233 VFFATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             HHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred             HHHcCCcccCCeeCcEEEECcChhh
Confidence            99996   36999999999999986

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=4.3e-54  Score=348.06  Aligned_cols=233  Identities=18%  Similarity=0.277  Sum_probs=210.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++....   ..+.+||++|+++++++++++.+++|++|++|||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~---~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA---ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH---HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh---CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            8999999999999999999999999999999988877765432   2345799999999999999999999999999999


Q ss_pred             CccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchh
Q psy12833         86 AGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA  164 (254)
Q Consensus        86 ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~  164 (254)
                      ||.... .++.+      .+.++|++.+++|+.++++++|+++|+|.+++      .|+||++||..+..+.+....|++
T Consensus        79 Ag~~~~~~~~~~------~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~------~G~IV~isS~~~~~~~~~~~~Y~a  146 (252)
T d1zmta1          79 DIFAPEFQPIDK------YAVEDYRGAVEALQIRPFALVNAVASQMKKRK------SGHIIFITSATPFGPWKELSTYTS  146 (252)
T ss_dssp             CCCCCCCCCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CCEEEEECCSTTTSCCTTCHHHHH
T ss_pred             CcCCCCCCChhh------CCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc------cceeeccccccccccccccccccc
Confidence            997643 44555      89999999999999999999999999999987      799999999999999999999999


Q ss_pred             chHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--------hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       165 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                      +|+|+.+|+|++|.|++++|||||+|+||+++|++....        .++..+.+.+..|+ +|+.+|||+|+.++||++
T Consensus       147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl-~R~g~pedvA~~v~fL~S  225 (252)
T d1zmta1         147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL-QRLGTQKELGELVAFLAS  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS-SSCBCHHHHHHHHHHHHT
T ss_pred             ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999986543        34556677788898 999999999999999997


Q ss_pred             C--CCcccceEEecCCcccC
Q psy12833        237 N--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~~  254 (254)
                      +  .|+|||+|.+|||++|+
T Consensus       226 ~~s~~iTG~~i~vdGG~~~~  245 (252)
T d1zmta1         226 GSCDYLTGQVFWLAGGFPMI  245 (252)
T ss_dssp             TSCGGGTTCEEEESTTCCCC
T ss_pred             chhcCCcCCeEEECCCceeC
Confidence            4  69999999999999986

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-53  Score=346.06  Aligned_cols=234  Identities=29%  Similarity=0.491  Sum_probs=209.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      .+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.+++||++|+++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            37999999999999999999999999999999999999988888776     3467889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      |++|++|||||..              ..++|++.+++|+.+++++++.++|.|.+++.   ...|+||++||.++..+.
T Consensus        81 G~iDilVnnAg~~--------------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~---~~~g~Iv~isS~~~~~~~  143 (254)
T d2gdza1          81 GRLDILVNNAGVN--------------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG---GEGGIIINMSSLAGLMPV  143 (254)
T ss_dssp             SCCCEEEECCCCC--------------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT---CCCEEEEEECCGGGTSCC
T ss_pred             CCcCeeccccccc--------------ccccchheeeeehhhHHHHHHHHHHHHHHhhc---CCCcEEEeeccHhhccCC
Confidence            9999999999974              33568899999999999999999999987642   125899999999999999


Q ss_pred             CCCccchhchHHHHHhHHH--HHHHhccCCcEEEEEecCCccccccccchH--------HHHHHHHhcCCCCCCCCCHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLP--MARDLAGAGIRVNTIAPGLFDTPLLSMLNE--------KVRNFLARSIPAPQRLGHPDE  226 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~--la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  226 (254)
                      +....|++||+|+.+|+|+  |+.|++++|||||+|+||+++|++.+...+        +..+.+.+.+|. +|+.+|||
T Consensus       144 ~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~ped  222 (254)
T d2gdza1         144 AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY-YGILDPPL  222 (254)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHH-HCCBCHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCC-CCCcCHHH
Confidence            9999999999999999997  788999999999999999999998765432        223455566777 89999999


Q ss_pred             HHHHHHHHhcCCCcccceEEecCCccc
Q psy12833        227 FAQLVQSIITNPLINGEVIRIDGALRM  253 (254)
Q Consensus       227 va~~~~~l~~~~~~~G~~i~~~gG~~~  253 (254)
                      +|+.++||++++++|||+|.||||.++
T Consensus       223 vA~~v~fL~s~~~itG~~i~VdGG~~~  249 (254)
T d2gdza1         223 IANGLITLIEDDALNGAIMKITTSKGI  249 (254)
T ss_dssp             HHHHHHHHHHCTTCSSCEEEEETTTEE
T ss_pred             HHHHHHHHHcCCCCCCCEEEECCCCee
Confidence            999999999988999999999999875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.8e-52  Score=333.83  Aligned_cols=228  Identities=21%  Similarity=0.328  Sum_probs=204.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.      ...++.||+++.      ++.+.++++++|+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~------~~~~~~~Dv~~~------~~~~~~~~g~iD~   69 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS------GHRYVVCDLRKD------LDLLFEKVKEVDI   69 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT------CSEEEECCTTTC------HHHHHHHSCCCSE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc------CCcEEEcchHHH------HHHHHHHhCCCcE
Confidence            6899999999999999999999999999999999987655432      346789999863      4556678899999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.....++.+      .+.++|++.+++|+.++++++|.++|.|.++.      .|+||+++|..+..+.+....
T Consensus        70 lVnnAG~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~------~G~ii~i~S~~~~~~~~~~~~  137 (234)
T d1o5ia_          70 LVLNAGGPKAGFFDE------LTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG------WGRIVAITSFSVISPIENLYT  137 (234)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTSCCTTBHH
T ss_pred             EEecccccCCcchhh------hhhHHHHHHhhhhhhhhhhhhhcccccccccc------ccccccccccccccccccccc
Confidence            999999877666666      89999999999999999999999999999887      799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NP  238 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~  238 (254)
                      |+++|+|+.+|+|++|.|++++|||||+|+||+++|++.... .++..+.+.+..|+ +|+.+|||+|+.++||++  +.
T Consensus       138 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl-~R~~~pediA~~v~fL~S~~s~  216 (234)
T d1o5ia_         138 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKAS  216 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             chhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChhhc
Confidence            999999999999999999999999999999999999987653 45566777888998 999999999999999997  47


Q ss_pred             CcccceEEecCCcccC
Q psy12833        239 LINGEVIRIDGALRMI  254 (254)
Q Consensus       239 ~~~G~~i~~~gG~~~~  254 (254)
                      ++|||+|.+|||+|.+
T Consensus       217 ~itG~~i~vDGG~s~~  232 (234)
T d1o5ia_         217 YLTGQTIVVDGGLSKF  232 (234)
T ss_dssp             TCCSCEEEESTTCCCC
T ss_pred             CCcCcEEEECcccccC
Confidence            9999999999999853

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-52  Score=340.72  Aligned_cols=242  Identities=22%  Similarity=0.247  Sum_probs=206.6

Q ss_pred             CCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++  |||+++|++|+++|++|++++|+++..++..+..  ..+..++++|++|+++++++++++.+++|
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            6899999999986  9999999999999999999999865544433222  55788999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||........  ....+.+.++|...+++|+.+++.++|.+.|.|.+        .|+||++||..+..+.|
T Consensus        86 ~iDilVnnag~~~~~~~~--~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--------~G~Iv~isS~~~~~~~~  155 (256)
T d1ulua_          86 GLDYLVHAIAFAPREAME--GRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--------GGGIVTLTYYASEKVVP  155 (256)
T ss_dssp             SEEEEEECCCCCCHHHHS--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--------EEEEEEEECGGGTSBCT
T ss_pred             CceEEEeccccccccccc--cchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--------CCEEEEEeehHhcCCCC
Confidence            999999999976443221  12233788999999999999999999999998865        58999999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      +...|+++|+|+.+|+|++|.|++++|||||+|+||+++|++....  .++..+.+.+..|+ +|+.+|||+|+++.||+
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~  234 (256)
T d1ulua_         156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL-RRNITQEEVGNLGLFLL  234 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999987664  35667778888998 99999999999999999


Q ss_pred             c--CCCcccceEEecCCcccC
Q psy12833        236 T--NPLINGEVIRIDGALRMI  254 (254)
Q Consensus       236 ~--~~~~~G~~i~~~gG~~~~  254 (254)
                      +  +.++|||+|.+|||+++.
T Consensus       235 S~~s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         235 SPLASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             SGGGTTCCSCEEEESTTGGGB
T ss_pred             CchhCCccCCeEEECcCEeCc
Confidence            7  479999999999999974

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.4e-51  Score=331.84  Aligned_cols=235  Identities=30%  Similarity=0.433  Sum_probs=207.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||+||||||++|||+++|++|+++|++|++++++.+ .+++..+++   +.++++++||++|+++++++++++.+++|
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999998766544 455555544   77899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc-ccCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~-~~~~  156 (254)
                      ++|++|||||.....++.+      .+.++|++.+++|+.++++++|.++|+|.+        ++++++++|..+ ..+.
T Consensus        84 ~idilinnag~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--------~g~~iii~s~~~~~~~~  149 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELE------VTQELFDKVFNLNTRGQFFVAQQGLKHCRR--------GGRIILTSSIAAVMTGI  149 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--------EEEEEEECCGGGTCCSC
T ss_pred             CCcEEEecccccccccccc------chHHHHHHHHhhccceeeeehhhhhhhhhc--------CCcccccccccccccCC
Confidence            9999999999987777666      899999999999999999999999999965        356777766555 4478


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-------------hHHHHHHHHhcCCCCCCCCC
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-------------NEKVRNFLARSIPAPQRLGH  223 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-------------~~~~~~~~~~~~~~~~~~~~  223 (254)
                      +.+..|+++|+|+.+|+|+||.|++++|||||+|+||+++|++.+..             .++..+.+.+..|. +|+++
T Consensus       150 ~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~  228 (259)
T d1ja9a_         150 PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGY  228 (259)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-SSCBC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC-CCCcC
Confidence            89999999999999999999999999999999999999999976331             24566777888898 99999


Q ss_pred             HHHHHHHHHHHhc--CCCcccceEEecCCc
Q psy12833        224 PDEFAQLVQSIIT--NPLINGEVIRIDGAL  251 (254)
Q Consensus       224 ~~~va~~~~~l~~--~~~~~G~~i~~~gG~  251 (254)
                      |+|||++++||++  +.++|||+|.+|||.
T Consensus       229 p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         229 PADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            9999999999997  478999999999994

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-50  Score=326.12  Aligned_cols=246  Identities=63%  Similarity=0.971  Sum_probs=220.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..++++.+.....+|+.+.+.+++....+......+|.
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +++|++...........+..+.+.+.|++.+++|+.++++++|++.|.|..+........|+||++||..+..+.|++..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~  162 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA  162 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchH
Confidence            99999987776666555666689999999999999999999999999998876555556799999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcc
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN  241 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  241 (254)
                      |+++|+|+.+|+|+|+.|++++|||||+|+||+++|++.....++..+.+.+..|+.+|+++|||||++++||++++|+|
T Consensus       163 Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s~~~it  242 (248)
T d2o23a1         163 YSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN  242 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999999999999999988877777788888887699999999999999999999999


Q ss_pred             cceEEe
Q psy12833        242 GEVIRI  247 (254)
Q Consensus       242 G~~i~~  247 (254)
                      ||+|.|
T Consensus       243 Gq~I~v  248 (248)
T d2o23a1         243 GEVIRL  248 (248)
T ss_dssp             SCEEEE
T ss_pred             ceEeEC
Confidence            999986

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.2e-50  Score=330.02  Aligned_cols=237  Identities=30%  Similarity=0.435  Sum_probs=207.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++|||++++++|+++|++|++++|+.+ .+++..+++   +.++.+++||++|+++++++++++.+.+|
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            78999999999999999999999999999999988754 445555443   67899999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-CC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-GQ  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-~~  156 (254)
                      ++|++|||+|.....++.+      .+.++|++.+++|+.++++++|.+.|+|.+        ++++++++|..+.. +.
T Consensus        96 ~idilV~nag~~~~~~~~~------~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--------~g~~i~i~s~~~~~~~~  161 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKD------VTPEEFDRVFTINTRGQFFVAREAYKHLEI--------GGRLILMGSITGQAKAV  161 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--------TCEEEEECCGGGTCSSC
T ss_pred             CCCccccccccchhhhhhh------hhhhHHHHHhhhccceeeeecccccccccc--------ccccccccccccccccc
Confidence            9999999999887777666      899999999999999999999999999976        46888888876554 56


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------------hHHH-HHHHHhcCCCCCCCCC
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------------NEKV-RNFLARSIPAPQRLGH  223 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------------~~~~-~~~~~~~~~~~~~~~~  223 (254)
                      +....|+++|+|+++|+|++|.|++++|||||+|+||+++|++.+..            .++. .....+..|+ +|+.+
T Consensus       162 ~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~~~  240 (272)
T d1g0oa_         162 PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-RRVGL  240 (272)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT-CSCBC
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC-CCCcC
Confidence            77788999999999999999999999999999999999999976432            1222 2234567888 99999


Q ss_pred             HHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        224 PDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       224 ~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      |||||.++.||++  +.++|||+|.+|||.+|
T Consensus       241 peevA~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         241 PIDIARVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHHhCchhcCccCceEeECCCCCC
Confidence            9999999999997  47999999999999986

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-50  Score=326.26  Aligned_cols=233  Identities=27%  Similarity=0.437  Sum_probs=207.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||++|||||++|||+++++.|+++|++|++++|++++++++.++  ..+.+..+|+.+.+.++    ...+.++++|+
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~--~~~~~~~~d~~~~~~~~----~~~~~~~~id~   77 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY--PGIQTRVLDVTKKKQID----QFANEVERLDV   77 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS--TTEEEEECCTTCHHHHH----HHHHHCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--cCCceeeeecccccccc----cccccccccee
Confidence            7899999999999999999999999999999999998888776554  35778889998876554    44556689999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccc-cCCCCCc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAY-EGQSGQV  160 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~-~~~~~~~  160 (254)
                      +|||+|.....++.+      .+.++|++.+++|+.+++.++|.+.|.|.+++      .|+|++++|..+. .+.+...
T Consensus        78 lVn~ag~~~~~~~~~------~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~------~g~Ii~isS~~~~~~~~~~~~  145 (245)
T d2ag5a1          78 LFNVAGFVHHGTVLD------CEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK------SGNIINMSSVASSVKGVVNRC  145 (245)
T ss_dssp             EEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCSBTTTBCCTTBH
T ss_pred             EEecccccCCCChhh------CCHHHHHHHHHHhhccchhHHHhhCcccccCC------CceeeeeechhhccCCccchh
Confidence            999999987777766      89999999999999999999999999999887      7999999998775 5788889


Q ss_pred             cchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      .|+++|+|+++|+|++|.|++++|||||+|+||+++|++....      .++..+.+.+..|+ +|+.+|||+|+.+.||
T Consensus       146 ~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~pedva~~v~fL  224 (245)
T d2ag5a1         146 VYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYL  224 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT-SSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999987543      23445666778888 9999999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.++|||+|.||||+||
T Consensus       225 ~s~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         225 ASDESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             HSGGGTTCCSCEEEECTTGGG
T ss_pred             hChhhCCCcCceEEeCCCcCC
Confidence            97  47999999999999996

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.7e-50  Score=324.27  Aligned_cols=225  Identities=22%  Similarity=0.318  Sum_probs=203.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCE-------EEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGR-------VVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~-------v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +++|||||++|||+++|++|+++|++       |++++|+.++++++.+++   +.++.+++||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999997       899999999998888776   56788999999999999999999999


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                      ++|++|++|||||.....++.+      .+.++|++.+++|+.++++++|.++|+|.+++      .|+||++||..+..
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~------~G~Ii~isS~~~~~  149 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSD------LTEEDFDYTMNTNLKGTFFLTQALFALMERQH------SGHIFFITSVAATK  149 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEECCGGGTS
T ss_pred             HcCCcceeecccccccCCcccc------CCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC------CCceEEEechhhcC
Confidence            9999999999999987777766      89999999999999999999999999999887      79999999999999


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +.|+...|+++|+|+.+|+++|+.|++++|||||+|+||+++|++++...++.          ..++..|||+|+.++|+
T Consensus       150 ~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~----------~~~~~~PedvA~~v~~l  219 (240)
T d2bd0a1         150 AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM----------QALMMMPEDIAAPVVQA  219 (240)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT----------GGGSBCHHHHHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh----------HhcCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987654321          15678999999999999


Q ss_pred             hcC--CCcccc-eEEecCCc
Q psy12833        235 ITN--PLINGE-VIRIDGAL  251 (254)
Q Consensus       235 ~~~--~~~~G~-~i~~~gG~  251 (254)
                      ++.  .+++|+ ++..+||.
T Consensus       220 ~s~~~~~~~~~~~i~p~~G~  239 (240)
T d2bd0a1         220 YLQPSRTVVEEIILRPTSGD  239 (240)
T ss_dssp             HTSCTTEEEEEEEEEETTCC
T ss_pred             HcCCccCccCCEEEEecCCC
Confidence            974  466666 55577773

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-50  Score=324.71  Aligned_cols=238  Identities=24%  Similarity=0.324  Sum_probs=207.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++     ..++.+++||++|+++++++++++.+++
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999999999888876     2468889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      |++|++|||||.....++.+      .+.++|++.+++|+.+++++++.+.|.|.+++..    .|+||++||.++....
T Consensus        88 g~iD~lVnnAg~~~~~~~~~------~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~----~g~Ii~isS~~~~~~~  157 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLS------GSTSGWKDMFNVNVLALSICTREAYQSMKERNVD----DGHIININSMSGHRVL  157 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTT------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC----SCEEEEECCGGGTSCC
T ss_pred             CCCCEEEecccccCCCcccc------ccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccC----CCceEEEechHhcCCC
Confidence            99999999999887766666      8999999999999999999999999999876421    5899999999987654


Q ss_pred             --CCCccchhchHHHHHhHHHHHHHh--ccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        157 --SGQVAYSASKSGIVGMTLPMARDL--AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       157 --~~~~~Y~~sK~a~~~~~~~la~e~--~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                        +....|+++|+|+.+|+|+|+.|+  +++||+||+|+||.++|++.....+...+......|. +++++|||+|++++
T Consensus       158 p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~-~r~~~pedvA~~v~  236 (257)
T d1xg5a_         158 PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQ-MKCLKPEDVAEAVI  236 (257)
T ss_dssp             SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC----CBCHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence              456679999999999999999998  7789999999999999998876655444556666777 99999999999999


Q ss_pred             HHhcC--CCcccceEEecCC
Q psy12833        233 SIITN--PLINGEVIRIDGA  250 (254)
Q Consensus       233 ~l~~~--~~~~G~~i~~~gG  250 (254)
                      ||+++  .++|||++.-++|
T Consensus       237 fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         237 YVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHSCTTEEEEEEEEEETT
T ss_pred             HHhCChhcCeECCEEEEeCC
Confidence            99974  5999997555444

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-50  Score=335.25  Aligned_cols=227  Identities=30%  Similarity=0.361  Sum_probs=206.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC---------CchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP---------TSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~---------~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+         .+.++++.++++.+...+.+|++|.++++++++++
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            689999999999999999999999999999998765         34566667777777788899999999999999999


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA  152 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~  152 (254)
                      .+++|++|++|||||+....++.+      .+.++|++.+++|+.++++++|.++|+|.+++      .|+||++||..+
T Consensus        85 ~~~~G~iDiLVnNAGi~~~~~~~~------~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~------~G~IV~isS~~~  152 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAGILRDRSFSR------ISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN------YGRIIMTASASG  152 (302)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------CEEEEEECCHHH
T ss_pred             HHHcCCCCEEEECCccCCCCChhh------CCHHHHhhhhceeehhhHHHHHHhHHHHHhCC------CcEEEEeCChhh
Confidence            999999999999999987777766      89999999999999999999999999999987      799999999999


Q ss_pred             ccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q psy12833        153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ  232 (254)
Q Consensus       153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (254)
                      ..+.++...|++||+|+.+|+++|+.|++++||+||+|+||+++|++.....++.           .+.++|||+|+.++
T Consensus       153 ~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~~-----------~~~~~PedvA~~v~  221 (302)
T d1gz6a_         153 IYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDL-----------VEALKPEYVAPLVL  221 (302)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHHH-----------HHHSCGGGTHHHHH
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHhh-----------HhcCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998776655543           23357999999999


Q ss_pred             HHhc-CCCcccceEEecCCc
Q psy12833        233 SIIT-NPLINGEVIRIDGAL  251 (254)
Q Consensus       233 ~l~~-~~~~~G~~i~~~gG~  251 (254)
                      ||++ ..++|||+|.+|||+
T Consensus       222 fL~S~~a~itG~~i~vdGG~  241 (302)
T d1gz6a_         222 WLCHESCEENGGLFEVGAGW  241 (302)
T ss_dssp             HHTSTTCCCCSCEEEEETTE
T ss_pred             HHcCCCcCCCCcEEEeCCCc
Confidence            9997 458999999999996

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.6e-49  Score=328.49  Aligned_cols=240  Identities=24%  Similarity=0.311  Sum_probs=212.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.+++||++|+++++++++.+.+.++
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            68999999999999999999999999999999999998877766655    67889999999999999999999999999


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS  157 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~  157 (254)
                      ++|++|||||.....++..      .+.+++++.+.+|..+.+.+.+...+.+.....     .+.+++++|..+..+.+
T Consensus       103 ~iDilvnnAg~~~~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~~~i~~~ss~~~~~~~~  171 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTER------LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-----GAAFLSITTIYAETGSG  171 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGG------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CEEEEEECCTHHHHCCT
T ss_pred             ccchhhhhhhhcccccccc------chhhhhhhheeeecccchhhhhhhhcccccccc-----cccccccccchhhhccc
Confidence            9999999999887776666      789999999999999999999887777665431     67889999999999999


Q ss_pred             CCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc---hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +...|+++|+|+.+|+|++|.|++++|||||+|+||+++|++....   .++..+...+..|+ +|+++|||+|+.+.||
T Consensus       172 ~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl-~R~~~pediA~~v~fL  250 (294)
T d1w6ua_         172 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC-GRLGTVEELANLAAFL  250 (294)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT-SSCBCHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCC-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987543   34556777788898 9999999999999999


Q ss_pred             hc--CCCcccceEEecCCccc
Q psy12833        235 IT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~--~~~~~G~~i~~~gG~~~  253 (254)
                      ++  +.++|||+|.+|||+++
T Consensus       251 ~sd~s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         251 CSDYASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             TSGGGTTCCSCEEEESTTHHH
T ss_pred             hCchhcCCCCcEEEECCChhh
Confidence            97  47999999999999875

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.2e-48  Score=312.62  Aligned_cols=237  Identities=19%  Similarity=0.241  Sum_probs=203.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHH---cCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVR---EGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~---~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      |+||+++|||||+|||+++|++|++   +|++|++++|+.++++++.+++     +.++.+++||++|+++++++++.+.
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            6899999999999999999999996   7999999999999999888876     3468899999999999999999988


Q ss_pred             HH----cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         74 DS----FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        74 ~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      +.    ++.+|++|||||.....+.   ....+.++++|++.+++|+.++++++|.++|+|.+++    ...++||++||
T Consensus        84 ~~~~~~~~~~~~lvnnag~~~~~~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~----~~~g~Iv~isS  156 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAATLGDVSK---GFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP----GLSKTVVNISS  156 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSS---CGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT----TCEEEEEEECC
T ss_pred             HhhhhccCceEEEEecccccccCCC---CccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcC----CCccccccccc
Confidence            73    3578999999997543221   1112279999999999999999999999999998753    11479999999


Q ss_pred             cccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc-----hHHHHHHHHhcCCCCCCCCCH
Q psy12833        150 IAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML-----NEKVRNFLARSIPAPQRLGHP  224 (254)
Q Consensus       150 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  224 (254)
                      .++..+.+++..|++||+|+.+|+++|+.|  .+|||||+|+||+++|++.+..     .++..+.+.+..|. +++.+|
T Consensus       157 ~~~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~p  233 (259)
T d1oaaa_         157 LCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GALVDC  233 (259)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT-TCSBCH
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC-CCCCCH
Confidence            999999999999999999999999999999  6799999999999999987543     23445555566666 899999


Q ss_pred             HHHHHHHHHHhc-CCCcccceEEec
Q psy12833        225 DEFAQLVQSIIT-NPLINGEVIRID  248 (254)
Q Consensus       225 ~~va~~~~~l~~-~~~~~G~~i~~~  248 (254)
                      +|+|+.+++|++ +.++|||+|++.
T Consensus       234 ~evA~~i~~ll~~~s~~TG~~idv~  258 (259)
T d1oaaa_         234 GTSAQKLLGLLQKDTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHHHHHHHHHCCSCTTEEEETT
T ss_pred             HHHHHHHHHHhhhccCCCCCeEEec
Confidence            999999999996 579999999873

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=4.4e-48  Score=312.63  Aligned_cols=231  Identities=22%  Similarity=0.290  Sum_probs=196.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCC-CHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVT-SEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls-~~~~~~~~~~~~~~~~   76 (254)
                      |+||++|||||++|||+++|++|+++|++|++++|+.++.+.+.+..    +.++.++.+|++ +.++++++++++.+++
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999877765554321    456889999998 7788999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||||.              .+.++|++++++|++++++++++++|.|.+++.   ...++||++||.++..+.
T Consensus        83 g~iDilvnnAG~--------------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~---~~~g~Ii~isS~~~~~~~  145 (254)
T d1sbya1          83 KTVDILINGAGI--------------LDDHQIERTIAINFTGLVNTTTAILDFWDKRKG---GPGGIIANICSVTGFNAI  145 (254)
T ss_dssp             SCCCEEEECCCC--------------CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT---CCCEEEEEECCGGGTSCC
T ss_pred             CCCCEEEeCCCC--------------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhccc---CCCceEEEEechhhccCC
Confidence            999999999995              356789999999999999999999999987642   126899999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchH--HHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      +++..|+++|+|+.+|+++|+.|++++|||||+|+||+++|++.+....  +..+.+.+.... .+..+||++|+.++++
T Consensus       146 ~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~va~~~~~~  224 (254)
T d1sbya1         146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS-HPTQTSEQCGQNFVKA  224 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT-SCCEEHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcccc-CCCCCHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999998654321  111112222222 5567899999999888


Q ss_pred             hcCCCcccceEEecCCc
Q psy12833        235 ITNPLINGEVIRIDGAL  251 (254)
Q Consensus       235 ~~~~~~~G~~i~~~gG~  251 (254)
                      +++. .||++|.+|||+
T Consensus       225 ~~~~-~tG~vi~vdgG~  240 (254)
T d1sbya1         225 IEAN-KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHC-CTTCEEEEETTE
T ss_pred             hhCC-CCCCEEEECCCE
Confidence            8654 599999999996

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-47  Score=304.28  Aligned_cols=213  Identities=23%  Similarity=0.339  Sum_probs=194.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++||++||||||+|||+++|++|+++|++|++++|+.++++++.+++   +.+++++.||++|+++++++++++.+++|+
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999999998888766   678999999999999999999999999999


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      +|++|||||......+.+      .+.+.|++.+++|+.+++++++.++|.|.+++      .|+||++||..+..+.|+
T Consensus        85 idilinnag~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------~G~Iv~isS~~~~~~~~~  152 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFA------TQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN------HGHIVTVASAAGHVSVPF  152 (244)
T ss_dssp             CSEEEECCCCCCCCCCGG------GHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEEECCCC-CCCHHH
T ss_pred             CceeEeeccccccccccc------cchhHHHhhcceeeeccHHHHHHHhhhHHhcC------CceEEEeecchhcCCCCC
Confidence            999999999987776666      78999999999999999999999999999987      799999999999999999


Q ss_pred             CccchhchHHHHHhHHHHHHHhcc---CCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAG---AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~---~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      ++.|++||+|+.+|+++|+.|+++   .||+|++|+||+++|++.+....+          . .+..+||++|+.+...+
T Consensus       153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~~----------~-~~~~~pe~va~~i~~~~  221 (244)
T d1yb1a_         153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTS----------L-GPTLEPEEVVNRLMHGI  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHHH----------H-CCCCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCcc----------c-cCCCCHHHHHHHHHHHH
Confidence            999999999999999999999976   589999999999999988654322          1 55678999999999887


Q ss_pred             cC
Q psy12833        236 TN  237 (254)
Q Consensus       236 ~~  237 (254)
                      ..
T Consensus       222 ~~  223 (244)
T d1yb1a_         222 LT  223 (244)
T ss_dssp             HT
T ss_pred             hc
Confidence            53

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-46  Score=303.79  Aligned_cols=243  Identities=17%  Similarity=0.196  Sum_probs=211.8

Q ss_pred             CCCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +|+||++|||||++  |||+++|+.|+++|++|++++|+++..+...+..  ..+...+.+|+++..++.+.++++.+.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            68999999999998  8999999999999999999999876555443322  5578889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +++|++|||++......+.. ........+.+...+++|..+.+.+++.+.+.+.+        .+.|+++||..+..+.
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Ii~iss~~~~~~~  152 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDG-DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--------GSALLTLSYLGAERAI  152 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSS-CHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECGGGTSBC
T ss_pred             cccceEEEeecccccccccc-cccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CcEEEEecchhhccCC
Confidence            99999999998765443321 11122577889999999999999999999998854        4689999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |....|+++|+|+.+|+|++|.|++++|||||+|+||+++|++....  .+...+...+..|. +|+.+|||+|+.+.||
T Consensus       153 ~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl-~R~~~peeia~~v~fL  231 (258)
T d1qsga_         153 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFL  231 (258)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT-SSCCCHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998764  35556677788898 9999999999999999


Q ss_pred             hcC--CCcccceEEecCCccc
Q psy12833        235 ITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       235 ~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +++  .++|||+|.+|||+++
T Consensus       232 ~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         232 CSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             TSGGGTTCCSCEEEESTTGGG
T ss_pred             hCchhcCccCceEEECcCHHH
Confidence            974  7999999999999986

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6e-46  Score=298.48  Aligned_cols=238  Identities=53%  Similarity=0.798  Sum_probs=205.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      .|++|||||++|||+++|++|+++|++|++++|+++.         .+...+++|+++......+......... .+.++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~   70 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------EDLIYVEGDVTREEDVRRAVARAQEEAP-LFAVV   70 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------SSSEEEECCTTCHHHHHHHHHHHHHHSC-EEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------ccceEeeccccchhhhHHHHHhhhcccc-ccchh
Confidence            4899999999999999999999999999999998754         3567889999999999999998877754 45556


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccch
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS  163 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~  163 (254)
                      .+++........  ......+.+.+++.+++|+.+.+.+++.+.+.+.......+...|+||++||..+..+.++...|+
T Consensus        71 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~  148 (241)
T d1uaya_          71 SAAGVGLAEKIL--GKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA  148 (241)
T ss_dssp             ECCCCCCCCCSB--CSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHH
T ss_pred             hhhhcccccccc--ccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhH
Confidence            666544332221  122236788999999999999999999999998766544444579999999999999999999999


Q ss_pred             hchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCCcccc
Q psy12833        164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGE  243 (254)
Q Consensus       164 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~  243 (254)
                      ++|+|+.+|+|++|.|++++|||||+|+||+++|++.....++..+......|+.+|+.+|||+|+.+.||++++|+|||
T Consensus       149 asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~~~iTG~  228 (241)
T d1uaya_         149 ASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGE  228 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999999999999999999988877777777777777669999999999999999999999999


Q ss_pred             eEEecCCccc
Q psy12833        244 VIRIDGALRM  253 (254)
Q Consensus       244 ~i~~~gG~~~  253 (254)
                      +|.+|||++|
T Consensus       229 ~i~VDGG~~m  238 (241)
T d1uaya_         229 VVRLDGALRM  238 (241)
T ss_dssp             EEEESTTCCC
T ss_pred             EEEECCcccC
Confidence            9999999987

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.9e-46  Score=305.58  Aligned_cols=247  Identities=23%  Similarity=0.271  Sum_probs=201.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-hhHHHHHHh----CCCce-----------------EEecCCCCH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-EGESVAKEL----GPDVK-----------------FAPVDVTSE   62 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~----~~~~~-----------------~~~~Dls~~   62 (254)
                      .++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++    +....                 .+.+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            48999999999999999999999999999877544 445544443    23333                 356679999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCC--------CcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc
Q psy12833         63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKG--------TVHSLDDFKRILLVNTVGTFNVARLSAQLIHENK  134 (254)
Q Consensus        63 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  134 (254)
                      ++++++++++.+++|++|++|||||.....++.+....        .+.....+...+.+|+.++++++|.+.+.+....
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            99999999999999999999999998877665542110        0011234556899999999999999999877655


Q ss_pred             CCCCCCCcEEEEEeccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhc
Q psy12833        135 LNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS  214 (254)
Q Consensus       135 ~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~  214 (254)
                      .......++|++++|.....+.++...|+++|+|+.+|+|++|.|++++|||||+|+||++.+.  ....++..+.....
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~--~~~~~~~~~~~~~~  240 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--DDMPPAVWEGHRSK  240 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG--GGSCHHHHHHHHTT
T ss_pred             HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc--ccCCHHHHHHHHhc
Confidence            4444557899999999999999999999999999999999999999999999999999986543  34456677777778


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        215 IPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       215 ~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      .|+.+|+.+|||+|+++.||++  +.|+|||+|.+|||+||
T Consensus       241 ~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         241 VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhc
Confidence            8865999999999999999997  47999999999999997

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2e-44  Score=301.97  Aligned_cols=237  Identities=14%  Similarity=0.225  Sum_probs=197.2

Q ss_pred             CCcEEEEeC--CCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC---------------CCceEE----------
Q psy12833          3 KGVVGLVTG--GASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG---------------PDVKFA----------   55 (254)
Q Consensus         3 ~~~~~lItG--as~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~---------------~~~~~~----------   55 (254)
                      .+|++||||  +++|||+++|++|+++|++|++++++............               ......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  66899999999999999999999987664443332110               001122          


Q ss_pred             ----------ecCCCCHHHHHHHHHHHHHHcCCCcEEEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHHH
Q psy12833         56 ----------PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA  123 (254)
Q Consensus        56 ----------~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  123 (254)
                                .+|+++.++++++++.+.+.+|++|++|||+|....  .++.+      .+.++|.+.+++|+++++.++
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~------~~~~~~~~~~~vn~~~~~~~~  154 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLN------TSRKGYLDALSKSSYSLISLC  154 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGG------CCHHHHHHHHHHHTHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhh------hhhhhhhhhcccchhHHHHHH
Confidence                      347778899999999999999999999999997543  23444      799999999999999999999


Q ss_pred             HHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC-CccchhchHHHHHhHHHHHHHhcc-CCcEEEEEecCCccccccc
Q psy12833        124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG-QVAYSASKSGIVGMTLPMARDLAG-AGIRVNTIAPGLFDTPLLS  201 (254)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~-~~i~v~~v~Pg~~~t~~~~  201 (254)
                      |.++|+|.+        .|+||++||..+..+.|+ ...|+++|+|+++|+|+||.|+++ +|||||+|+||+++|+..+
T Consensus       155 k~~~~~m~~--------~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~  226 (329)
T d1uh5a_         155 KYFVNIMKP--------QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT  226 (329)
T ss_dssp             HHHGGGEEE--------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGG
T ss_pred             HHHHhhccc--------ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhh
Confidence            999999954        589999999999998886 457899999999999999999986 6999999999999994211


Q ss_pred             ---------------------------------------------cchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc
Q psy12833        202 ---------------------------------------------MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       202 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (254)
                                                                   ...+...+.+.+..|+ +|..+|||||.+++||++
T Consensus       227 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~~~pedvA~~v~fLaS  305 (329)
T d1uh5a_         227 AINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKLLSTDIGSVASFLLS  305 (329)
T ss_dssp             GCC------------------------------------------CHHHHHHHHHHHHSSS-CSCCCHHHHHHHHHHHHS
T ss_pred             cccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCC-CCCcCHHHHHHHHHHHhC
Confidence                                                         1234556677788898 999999999999999997


Q ss_pred             C--CCcccceEEecCCcccC
Q psy12833        237 N--PLINGEVIRIDGALRMI  254 (254)
Q Consensus       237 ~--~~~~G~~i~~~gG~~~~  254 (254)
                      +  .++|||+|.+|||+++.
T Consensus       306 d~s~~iTGq~i~VDGG~~~~  325 (329)
T d1uh5a_         306 RESRAITGQTIYVDNGLNIM  325 (329)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             chhCCccCCeEEECCCcccc
Confidence            4  79999999999999873

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=7.2e-44  Score=290.73  Aligned_cols=243  Identities=18%  Similarity=0.215  Sum_probs=204.4

Q ss_pred             CCCCcEEEEeCC--CChHHHHHHHHHHHcCCEEEEeeCCCchh-HHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-
Q psy12833          1 MLKGVVGLVTGG--ASGLGKATVERIVREGGRVVLCDLPTSEG-ESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-   76 (254)
Q Consensus         1 ml~~~~~lItGa--s~giG~a~a~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-   76 (254)
                      ||+||++|||||  ++|||+++|++|+++|++|++++|+.+++ +++.++++.+...++||+++++++.++++.+.+.+ 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            799999999994  57999999999999999999999998876 44556678889999999999999999999998875 


Q ss_pred             --CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         77 --GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        77 --~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                        +++|++|||+|....... ...+..+.+.+++.+.+.+|..+.+...+...+.+.         ++.+++++|.....
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~~s~~~~~  152 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGM-GINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---------PGGSIVGMDFDPSR  152 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGS-TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---------EEEEEEEEECCCSS
T ss_pred             cCCCcceeeecccccCcccc-ccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---------cccccccccccccc
Confidence              579999999997543322 223344578999999999999999988888776543         35577777888888


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccc------------hHHHHHHHHhcCCCCCCCC
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML------------NEKVRNFLARSIPAPQRLG  222 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~------------~~~~~~~~~~~~~~~~~~~  222 (254)
                      +.|.+..|+++|+|+.+|+|+++.|++++|||||+|+||+++|++.+..            .+...+...+..|+.+++.
T Consensus       153 ~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~  232 (268)
T d2h7ma1         153 AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMK  232 (268)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTT
T ss_pred             cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCC
Confidence            8899999999999999999999999999999999999999999976432            1234455666778735589


Q ss_pred             CHHHHHHHHHHHhcC--CCcccceEEecCCccc
Q psy12833        223 HPDEFAQLVQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       223 ~~~~va~~~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      +|+|+|+.+.||+++  .++|||+|.+|||++.
T Consensus       233 ~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         233 DATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             CCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence            999999999999974  7999999999999973

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2.8e-43  Score=288.17  Aligned_cols=241  Identities=16%  Similarity=0.194  Sum_probs=192.6

Q ss_pred             CCCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         1 ml~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ||+||++|||||+|  |||+++|++|+++|++|++++|+++..+ ..+++   +....++.+|+++.++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-RVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            69999999999765  9999999999999999999999864333 33332   567788999999999999999999999


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                      ++++|++|||+|.........  .........+...+.++..+.....+...+.+..        .+.|++.++.....+
T Consensus        81 ~g~id~lV~nag~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~s~~~~~~~  150 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEG--SLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--------GASVLTLSYLGSTKY  150 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSS--CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECGGGTSB
T ss_pred             cCCCCeEEeeccccccccccc--ccccccchhhhhhhcccccccccccccccccccc--------Ccceeeecccccccc
Confidence            999999999999865543332  1122345555555555555555544444433211        356777777777778


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLARSIPAPQRLGHPDEFAQLVQS  233 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (254)
                      .+....|+++|+|+.+++|+++.|++++|||||+++||+++|++.....  ++.........|. +|+.+|||+|+.++|
T Consensus       151 ~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedIA~~v~f  229 (274)
T d2pd4a1         151 MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL-RKNVSLEEVGNAGMY  229 (274)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT-SSCCCHHHHHHHHHH
T ss_pred             cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc-cCCcCHHHHHHHHHH
Confidence            8888999999999999999999999999999999999999999887653  4445555566777 999999999999999


Q ss_pred             HhcC--CCcccceEEecCCccc
Q psy12833        234 IITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       234 l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      |+++  .++|||+|.+|||+++
T Consensus       230 L~S~~s~~itG~~i~vDGG~~~  251 (274)
T d2pd4a1         230 LLSSLSSGVSGEVHFVDAGYHV  251 (274)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhChhhCCCcCceEEECCChhh
Confidence            9974  7999999999999986

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-44  Score=293.58  Aligned_cols=226  Identities=21%  Similarity=0.253  Sum_probs=183.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEE---EeeCCCchhH---HHHHHh---CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVV---LCDLPTSEGE---SVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~---~~~r~~~~~~---~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      -|+|||||||+|||+++|++|+++|++|+   .+.|+.+..+   +..+++   +.++.+++||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            47899999999999999999999998755   4455544433   333443   56789999999999999999998754


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                        +++|++|||+|.....++.+      .+.++|++.+++|+.++++++++++|+|.+++      .|+||++||.++..
T Consensus        82 --g~idilvnnag~~~~~~~~~------~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~------~G~Iv~isS~~g~~  147 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEA------LGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG------SGRVLVTGSVGGLM  147 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGG------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEEEEGGGTS
T ss_pred             --cchhhhhhcccccccccccc------hhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC------CCceEEEechhhcC
Confidence              78999999999987777766      89999999999999999999999999999887      79999999999999


Q ss_pred             CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch---HH--------HHHHH------HhcCCC
Q psy12833        155 GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN---EK--------VRNFL------ARSIPA  217 (254)
Q Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~---~~--------~~~~~------~~~~~~  217 (254)
                      +.|+...|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+...   ++        ..+.+      .+..+.
T Consensus       148 ~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
T d1jtva_         148 GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR  227 (285)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999999999999999999999999875431   11        01111      112233


Q ss_pred             CCCCCCHHHHHHHHHHHhcCC-----Ccccce
Q psy12833        218 PQRLGHPDEFAQLVQSIITNP-----LINGEV  244 (254)
Q Consensus       218 ~~~~~~~~~va~~~~~l~~~~-----~~~G~~  244 (254)
                       ++..+|||||+.++++++++     |++|+.
T Consensus       228 -~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         228 -EAAQNPEEVAEVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             -HHCBCHHHHHHHHHHHHHCSSCCSEEESCST
T ss_pred             -ccCCCHHHHHHHHHHHHhCCCCCeEEecHHH
Confidence             56789999999999999642     566653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.2e-42  Score=282.99  Aligned_cols=246  Identities=21%  Similarity=0.262  Sum_probs=197.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHh----CCCceEEecCC----CCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKEL----GPDVKFAPVDV----TSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~----~~~~~~~~~Dl----s~~~~~~~~~~~~~~~   75 (254)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++    +.+...+++|+    +..+.++++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999998765 34555544    55666666544    4467788999999999


Q ss_pred             cCCCcEEEeCCccCCCcccccc-----CCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNY-----NKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      +|++|++|||||+..+.++.+.     ....+.....+...+..|..+.+...+...+.+...... ....+.+++++|.
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  160 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW-RSRNLSVVNLCDA  160 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECCG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccc-ccccccchhhhhc
Confidence            9999999999998766554321     122224456778888999999999988888776654322 1236789999999


Q ss_pred             ccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q psy12833        151 AAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       151 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  230 (254)
                      .+..+.|++..|++||+|+++|++++|.|++++|||||+|+||+++|++..  .++..+.+.+.+|+.++..+|||+|++
T Consensus       161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~--~~~~~~~~~~~~pl~r~~~~peeva~~  238 (266)
T d1mxha_         161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM--PQETQEEYRRKVPLGQSEASAAQIADA  238 (266)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS--CHHHHHHHHTTCTTTSCCBCHHHHHHH
T ss_pred             cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC--CHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999999999998654  355667777888883445899999999


Q ss_pred             HHHHhcC--CCcccceEEecCCccc
Q psy12833        231 VQSIITN--PLINGEVIRIDGALRM  253 (254)
Q Consensus       231 ~~~l~~~--~~~~G~~i~~~gG~~~  253 (254)
                      ++||+++  .++|||+|.+|||++|
T Consensus       239 v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         239 IAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhCCccCCeEEECccHhh
Confidence            9999974  7999999999999987

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=9.2e-43  Score=280.96  Aligned_cols=225  Identities=21%  Similarity=0.192  Sum_probs=185.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHH---HcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHH--HcC
Q psy12833          5 VVGLVTGGASGLGKATVERIV---REGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKD--SFG   77 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~---~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~--~~~   77 (254)
                      |++||||||+|||+++|++|+   ++|++|++++|+.++++++.+..  +.++.+++||++|+++++++++++.+  .++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            799999999999999999996   57999999999999888776432  67899999999999999999999865  568


Q ss_pred             CCcEEEeCCccCCCcc-ccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC-----CCCCCcEEEEEeccc
Q psy12833         78 KLDVNVNCAGISCAFK-IFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLN-----EDGLRGVIINTASIA  151 (254)
Q Consensus        78 ~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~ii~vss~~  151 (254)
                      ++|++|||||+..... +.+      .+.++|++.+++|+++++.+++.++|+|.++...     .....+++|+++|..
T Consensus        83 ~iDiLvnNAg~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~  156 (248)
T d1snya_          83 GLNVLFNNAGIAPKSARITA------VRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  156 (248)
T ss_dssp             CCSEEEECCCCCCCCCCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             CcceEEeeccccccCccccc------CCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc
Confidence            9999999999865543 334      7899999999999999999999999999875321     112368999999988


Q ss_pred             ccc---CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHH
Q psy12833        152 AYE---GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFA  228 (254)
Q Consensus       152 ~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  228 (254)
                      +..   +.+++.+|++||+|+.+|+++++.|++++||+||+|+||+++|++....                ....+++.+
T Consensus       157 g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~----------------~~~~~~~~~  220 (248)
T d1snya_         157 GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS----------------APLDVPTST  220 (248)
T ss_dssp             GCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT----------------CSBCHHHHH
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc----------------CCCCchHHH
Confidence            764   3556779999999999999999999999999999999999999986431                112444555


Q ss_pred             HHHHHHhc--CCCcccceEEecCCc
Q psy12833        229 QLVQSIIT--NPLINGEVIRIDGAL  251 (254)
Q Consensus       229 ~~~~~l~~--~~~~~G~~i~~~gG~  251 (254)
                      +.++.++.  .+..+|++|++||+.
T Consensus       221 ~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         221 GQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHhcCccCCCcEEEECCeE
Confidence            55555553  455699999999974

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.6e-43  Score=289.06  Aligned_cols=237  Identities=19%  Similarity=0.251  Sum_probs=192.7

Q ss_pred             CCCcEEEEeCCCC--hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------------CC--Cc-eEEecC------
Q psy12833          2 LKGVVGLVTGGAS--GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------------GP--DV-KFAPVD------   58 (254)
Q Consensus         2 l~~~~~lItGas~--giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------------~~--~~-~~~~~D------   58 (254)
                      |+||++|||||++  |||+++|++|+++|++|++++|+...........            ..  .. ...++|      
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcccc
Confidence            7899999999875  9999999999999999999998754322221110            00  00 122222      


Q ss_pred             --------------CCCHHHHHHHHHHHHHHcCCCcEEEeCCccCCC--ccccccCCCCcCCHHHHHHHHHHHhHHHHHH
Q psy12833         59 --------------VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCA--FKIFNYNKGTVHSLDDFKRILLVNTVGTFNV  122 (254)
Q Consensus        59 --------------ls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  122 (254)
                                    .++.++++++++++.+++|++|++|||||....  .++.+      .+.++|++.+++|+.+++.+
T Consensus        86 ~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~------~~~~~~~~~~~vn~~~~~~~  159 (297)
T d1d7oa_          86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLE------TSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGG------CCHHHHHHHHHHHTHHHHHH
T ss_pred             ccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhh------hhcccccccccchhhhhhhh
Confidence                          356677899999999999999999999997532  33444      89999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCCCCcEEEEEecccccc-CCCCCccchhchHHHHHhHHHHHHHhc-cCCcEEEEEecCCcccccc
Q psy12833        123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYE-GQSGQVAYSASKSGIVGMTLPMARDLA-GAGIRVNTIAPGLFDTPLL  200 (254)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~~~t~~~  200 (254)
                      ++++++.+.++        +.++.+++..... ..+....|+++|+++.++++.++.|++ ++|||||+|+||+++|++.
T Consensus       160 ~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~  231 (297)
T d1d7oa_         160 LSHFLPIMNPG--------GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA  231 (297)
T ss_dssp             HHHHGGGEEEE--------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred             hhHHHHHhhcC--------CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhh
Confidence            99999887663        5666666666554 446677899999999999999999996 5799999999999999998


Q ss_pred             ccc--hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        201 SML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       201 ~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                      +..  .++..+...+..|+ +|+.+|||||+.++||++  +.++|||+|.+|||++.
T Consensus       232 ~~~~~~~~~~~~~~~~~Pl-gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         232 KAIGFIDTMIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             SCCSHHHHHHHHHHHHSSS-CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhccCCHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh
Confidence            753  45667777888898 999999999999999997  47999999999999985

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.3e-42  Score=278.89  Aligned_cols=226  Identities=19%  Similarity=0.180  Sum_probs=183.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC--
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG--   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--   77 (254)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.++.+.++++++||++|+++++++++++.+.++  
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            5679999999999999999999999996  688999999999988877788899999999999999999999999876  


Q ss_pred             CCcEEEeCCccCCC-ccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCC-----CCCCcEEEEEeccc
Q psy12833         78 KLDVNVNCAGISCA-FKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNE-----DGLRGVIINTASIA  151 (254)
Q Consensus        78 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~ii~vss~~  151 (254)
                      ++|++|||||+... .+..+      .+.++|++.+++|+.+++++++.++|+|.++....     ....+++++++|..
T Consensus        81 ~idilinnAG~~~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~  154 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTE------PNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSC------CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             CeEEEEEcCcccCCCCcccc------CCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccc
Confidence            49999999998644 23333      78999999999999999999999999998764221     12357899998876


Q ss_pred             cccCC-------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCH
Q psy12833        152 AYEGQ-------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHP  224 (254)
Q Consensus       152 ~~~~~-------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (254)
                      .....       .+..+|++||+|+.+|+++|+.|+++.||+|++++||+++|+|...                ....+|
T Consensus       155 ~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~----------------~~~~~~  218 (250)
T d1yo6a1         155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------NAALTV  218 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------
T ss_pred             ccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC----------------CCCCCH
Confidence            65432       2345799999999999999999999999999999999999998632                223578


Q ss_pred             HHHHHHHHHHhc--CCCcccceEEecC
Q psy12833        225 DEFAQLVQSIIT--NPLINGEVIRIDG  249 (254)
Q Consensus       225 ~~va~~~~~l~~--~~~~~G~~i~~~g  249 (254)
                      ||.+..++..+.  .+..+|++++.||
T Consensus       219 e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         219 EQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            999999999886  3456899998876

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-42  Score=282.40  Aligned_cols=214  Identities=17%  Similarity=0.228  Sum_probs=189.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ||+||++||||||+|||+++|++|+++|++|++++|+.++++++.+++    +..+..+.+|+++.+++..+.+.+.+.+
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999999999998887764    5678889999999999999999999999


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                      +.+|+++||+|......+.+      .+.+++++.+++|+.+++.+++.++|+|.+.       .|+||++||.++..+.
T Consensus        91 g~~~~li~nag~~~~~~~~~------~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-------~G~ii~isS~~~~~~~  157 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFH------DDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-------NGSIVVVSSLAGKVAY  157 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCC------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-------TCEEEEEEEGGGTSCC
T ss_pred             CCcccccccccccccccccc------CCHHHhhhheeeehhhHHHHHHHHHHHHHhc-------CCcceEeccchhcCCC
Confidence            99999999999876665555      7999999999999999999999999999765       5999999999999999


Q ss_pred             CCCccchhchHHHHHhHHHHHHHhcc--CCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q psy12833        157 SGQVAYSASKSGIVGMTLPMARDLAG--AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI  234 (254)
Q Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~--~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (254)
                      |+...|++||+|+.+|+++|+.|+++  .||+|++++||+++|++.....+        ..+. ....++|++|..++..
T Consensus       158 p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~--------~~~~-~~~~~~e~~a~~i~~~  228 (269)
T d1xu9a_         158 PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS--------GIVH-MQAAPKEECALEIIKG  228 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC--------GGGG-GGCBCHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhcc--------CCcc-ccCCCHHHHHHHHHHH
Confidence            99999999999999999999999975  57999999999999987642211        1111 3346899999988877


Q ss_pred             hc
Q psy12833        235 IT  236 (254)
Q Consensus       235 ~~  236 (254)
                      ..
T Consensus       229 ~~  230 (269)
T d1xu9a_         229 GA  230 (269)
T ss_dssp             HH
T ss_pred             hh
Confidence            64

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-43  Score=285.77  Aligned_cols=214  Identities=26%  Similarity=0.338  Sum_probs=184.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE-GGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++..+++   +.++.+++||++|.++++++++++.++++++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            45699999999999999999986 899999999999999888877   67899999999999999999999999999999


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-----  155 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-----  155 (254)
                      ++|||||+.......+      .+.++|++.+++|+++++++++.++|+|++        .|+||++||..+..+     
T Consensus        84 iLVnNAGi~~~~~~~~------~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--------~g~ivnisS~~~~~~~~~~~  149 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPT------PFHIQAEVTMKTNFFGTRDVCTELLPLIKP--------QGRVVNVSSIMSVRALKSCS  149 (275)
T ss_dssp             EEEECCCCCCCTTCCS------CHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEECCHHHHHHHHTSC
T ss_pred             EEEEcCCcCCCCCccc------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCcccccccceeccccccc
Confidence            9999999876655544      678899999999999999999999999954        589999999766432     


Q ss_pred             ------------------------------------CCCCccchhchHHHHHhHHHHHHHhcc----CCcEEEEEecCCc
Q psy12833        156 ------------------------------------QSGQVAYSASKSGIVGMTLPMARDLAG----AGIRVNTIAPGLF  195 (254)
Q Consensus       156 ------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~----~~i~v~~v~Pg~~  195 (254)
                                                          ..+...|++||+++.+|++.+++|+++    .||+||+++||++
T Consensus       150 ~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v  229 (275)
T d1wmaa1         150 PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV  229 (275)
T ss_dssp             HHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB
T ss_pred             hhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccc
Confidence                                                123457999999999999999999866    4999999999999


Q ss_pred             cccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc-C---CCcccceEEecC
Q psy12833        196 DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT-N---PLINGEVIRIDG  249 (254)
Q Consensus       196 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~---~~~~G~~i~~~g  249 (254)
                      +|++...                ....+|||+|+.+++++. +   ...+|+++. |.
T Consensus       230 ~T~m~~~----------------~~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         230 RTDMAGP----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             CSTTTCT----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             cCCcccC----------------cccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence            9998642                334589999999999973 2   356898886 44

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.5e-41  Score=269.60  Aligned_cols=221  Identities=16%  Similarity=0.172  Sum_probs=184.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC--CCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG--KLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~--~id   80 (254)
                      +||++|||||++|||++++++|+++|++|++++++..+.       ......+.+|.++.++.+.+...+.+.++  ++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------ccccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            589999999999999999999999999999999876532       12345677888999999999998888654  699


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCc
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV  160 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~  160 (254)
                      ++|||||.........     +.+.++|++.+++|+.+++++++.++|+|.+        .|+||++||.++..+.+++.
T Consensus        74 ~lInnAG~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--------~G~Iv~isS~~~~~~~~~~~  140 (236)
T d1dhra_          74 AILCVAGGWAGGNAKS-----KSLFKNCDLMWKQSIWTSTISSHLATKHLKE--------GGLLTLAGAKAALDGTPGMI  140 (236)
T ss_dssp             EEEECCCCCCCBCTTC-----TTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--------EEEEEEECCGGGGSCCTTBH
T ss_pred             EEEECCcccccccchh-----cCCHHHHHHHHHHcchHHHHHHHHHHHhccc--------ccceeEEccHHHcCCccCCc
Confidence            9999999654433222     2567899999999999999999999999954        58999999999999999999


Q ss_pred             cchhchHHHHHhHHHHHHHhc--cCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC-
Q psy12833        161 AYSASKSGIVGMTLPMARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-  237 (254)
Q Consensus       161 ~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-  237 (254)
                      .|++||+|+.+|+++|+.|++  ++||+||+|+||+++|++.+...        ...+. .++.+||++|+.+.+|+++ 
T Consensus       141 ~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~--------~~~~~-~~~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         141 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM--------PEADF-SSWTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS--------TTSCG-GGSEEHHHHHHHHHHHHTTT
T ss_pred             ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhC--------ccchh-hcCCCHHHHHHHHHHHhCCC
Confidence            999999999999999999998  57999999999999998854211        11122 6778999999999999974 


Q ss_pred             -CCcccceEEe--cCCcc
Q psy12833        238 -PLINGEVIRI--DGALR  252 (254)
Q Consensus       238 -~~~~G~~i~~--~gG~~  252 (254)
                       .+++|+.|.+  ++|.+
T Consensus       212 ~~~i~G~~i~v~~~~g~t  229 (236)
T d1dhra_         212 KRPNSGSLIQVVTTDGKT  229 (236)
T ss_dssp             TCCCTTCEEEEEEETTEE
T ss_pred             ccCCCCCeEEEEEECCEE
Confidence             6799998776  45543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=6.3e-39  Score=259.69  Aligned_cols=215  Identities=25%  Similarity=0.386  Sum_probs=164.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCCcEEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKLDVNV   83 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id~li   83 (254)
                      |++|||||++|||+++|++|+++|++|++++|+.++              ..+|+++.+..+....+..... +.+|+++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv   67 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------VIADLSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEE
Confidence            899999999999999999999999999999997653              4679999999998887777655 5799999


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc------------
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA------------  151 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~------------  151 (254)
                      +|||...             ..+.+.....+|..+...+.+...+.+.+..      .....++++..            
T Consensus        68 ~~Ag~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  128 (257)
T d1fjha_          68 LCAGLGP-------------QTKVLGNVVSVNYFGATELMDAFLPALKKGH------QPAAVVISSVASAHLAFDKNPLA  128 (257)
T ss_dssp             ECCCCCT-------------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS------SCEEEEECCGGGGSSCGGGCTTH
T ss_pred             EcCCCCC-------------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc------cCcceeeeeccccchhhhhhhhh
Confidence            9998643             3345677789999999999999999888765      34455444432            


Q ss_pred             ---------------cccCC-CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccch--HHHHHHHHh
Q psy12833        152 ---------------AYEGQ-SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN--EKVRNFLAR  213 (254)
Q Consensus       152 ---------------~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~  213 (254)
                                     +..+. ++...|++||+|+++|+|++|.|++++|||||+|+||+++|++.+...  ++..+...+
T Consensus       129 ~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  208 (257)
T d1fjha_         129 LALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK  208 (257)
T ss_dssp             HHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------
T ss_pred             hhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHh
Confidence                           22222 234579999999999999999999999999999999999999876542  233333333


Q ss_pred             -cCCCCCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCccc
Q psy12833        214 -SIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALRM  253 (254)
Q Consensus       214 -~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~~  253 (254)
                       ..|+ +|+.+|||+|+.+.||++  +.++|||+|.+|||+|.
T Consensus       209 ~~~Pl-gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         209 FVPPM-GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CCCST-TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             cCCCC-CCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence             3567 999999999999999997  47999999999999873

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.6e-39  Score=257.76  Aligned_cols=220  Identities=17%  Similarity=0.150  Sum_probs=180.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHH--cCCCcE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDS--FGKLDV   81 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~--~~~id~   81 (254)
                      +++||||||++|||++++++|+++|++|++++|+..+..       .....+.+|..+.+......+.+...  ++++|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------cccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            456799999999999999999999999999999875421       23445678888888888888887774  488999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|||||.........     +.+.+.|+.++++|+.+++++++.++|+|++        .++|+++||..+..+.+++..
T Consensus        75 linnAG~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--------~g~Iv~isS~~~~~~~~~~~~  141 (235)
T d1ooea_          75 VFCVAGGWAGGSASS-----KDFVKNADLMIKQSVWSSAIAAKLATTHLKP--------GGLLQLTGAAAAMGPTPSMIG  141 (235)
T ss_dssp             EEECCCCCCCBCTTS-----TTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--------EEEEEEECCGGGGSCCTTBHH
T ss_pred             EEECCcccccccccc-----cCcHHHHhhHhhhHHHHHHHHhhhccccccc--------ceEEEEeccHHhcCCcccccc
Confidence            999999764433222     1456889999999999999999999999954        589999999999999999999


Q ss_pred             chhchHHHHHhHHHHHHHhc--cCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhc---
Q psy12833        162 YSASKSGIVGMTLPMARDLA--GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT---  236 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~---  236 (254)
                      |+++|+|+.+|+++|+.|++  +.+|+||+++||+++|++.+...        ...+. .++.+|+++++.+++++.   
T Consensus       142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~--------~~~~~-~~~~~~~~va~~~~~~l~~~~  212 (235)
T d1ooea_         142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM--------PNADH-SSWTPLSFISEHLLKWTTETS  212 (235)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS--------TTCCG-GGCBCHHHHHHHHHHHHHCGG
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC--------cCCcc-ccCCCHHHHHHHHHHHhcCcc
Confidence            99999999999999999998  47999999999999998764321        11222 677899999999986663   


Q ss_pred             CCCcccceEEe---cCCcc
Q psy12833        237 NPLINGEVIRI---DGALR  252 (254)
Q Consensus       237 ~~~~~G~~i~~---~gG~~  252 (254)
                      +.+++|+.+.+   ||+.+
T Consensus       213 ~~~~tG~~i~v~~~~g~~~  231 (235)
T d1ooea_         213 SRPSSGALLKITTENGTST  231 (235)
T ss_dssp             GCCCTTCEEEEEEETTEEE
T ss_pred             ccCCCceEEEEEeeCCEEE
Confidence            35799999998   55544

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=2.2e-32  Score=221.21  Aligned_cols=221  Identities=19%  Similarity=0.201  Sum_probs=171.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCc---hhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTS---EGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      .++++|||||++|||++++++|+++|+ +|++++|+..   ..++..+++   +.++.++.||++|+++++++++.+.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            367999999999999999999999999 6889999743   344444443   678999999999999999999998665


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                       +++|.+|||+|.....++.+      .+.++++..+++|+.+.+++.+.+    ....      .++||++||..+..+
T Consensus        88 -~~i~~vv~~ag~~~~~~~~~------~~~~~~~~~~~~~~~g~~~l~~~~----~~~~------~~~iv~~SS~a~~~g  150 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDDGTVDT------LTGERIERASRAKVLGARNLHELT----RELD------LTAFVLFSSFASAFG  150 (259)
T ss_dssp             -SCEEEEEECCCCCCCCCGGG------CCHHHHHHHTHHHHHHHHHHHHHH----TTSC------CSEEEEEEEHHHHTC
T ss_pred             -cccccccccccccccccccc------ccHHHHHHHhhhhccchhHHHHHh----hccC------CceEeeecchhhccC
Confidence             58999999999987777766      899999999999999999887653    3333      589999999999999


Q ss_pred             CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Q psy12833        156 QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII  235 (254)
Q Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  235 (254)
                      .++...|+++|+++++|++.+    ...|+++++|+||.+.++.+..  +...+.+.   ...-..++|+++++.+..++
T Consensus       151 ~~~~~~YaAaka~l~~la~~~----~~~Gi~v~~I~pg~~~~~g~~~--~~~~~~~~---~~G~~~~~~~~~~~~l~~~l  221 (259)
T d2fr1a1         151 APGLGGYAPGNAYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAE--GPVADRFR---RHGVIEMPPETACRALQNAL  221 (259)
T ss_dssp             CTTCTTTHHHHHHHHHHHHHH----HHTTCCCEEEEECCBC--------------CT---TTTEECBCHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHhHHHHHHHH----HhCCCCEEECCCCcccCCcccc--chHHHHHH---hcCCCCCCHHHHHHHHHHHH
Confidence            999999999999988776554    4569999999999987653321  11111111   11023468999999999999


Q ss_pred             cCCCcccceEEecC
Q psy12833        236 TNPLINGEVIRIDG  249 (254)
Q Consensus       236 ~~~~~~G~~i~~~g  249 (254)
                      ..+......+.+|.
T Consensus       222 ~~~~~~~~v~~~d~  235 (259)
T d2fr1a1         222 DRAEVCPIVIDVRW  235 (259)
T ss_dssp             HTTCSSCEECEECH
T ss_pred             hCCCceEEEEeCcH
Confidence            76666666666653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=3.7e-22  Score=167.87  Aligned_cols=222  Identities=14%  Similarity=0.129  Sum_probs=156.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-----hhHHHHH---HhCCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-----EGESVAK---ELGPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-----~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      .|+||||||||.||++++++|.++|++|+.++|...     +++.+..   ....++.++++|++|.+++++++++.   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            389999999999999999999999999999999543     2222222   22568999999999999999999877   


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                        .+|++||+|+.....          .+.++.+..+++|+.++.++++++...-.+.       ..++|++||...+..
T Consensus        78 --~~d~v~h~aa~~~~~----------~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~-------~~r~i~~SS~~vYG~  138 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVA----------VSFESPEYTADVDAMGTLRLLEAIRFLGLEK-------KTRFYQASTSELYGL  138 (357)
T ss_dssp             --CCSEEEECCCCCTTT----------TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT-------TCEEEEEEEGGGGTT
T ss_pred             --CCCEEEEeecccccc----------hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC-------CcEEEEEEchhhhCC
Confidence              799999999975432          2345567789999999999988876543222       357999999765421


Q ss_pred             -----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------chHHHHHHHHhcCC--
Q psy12833        156 -----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------LNEKVRNFLARSIP--  216 (254)
Q Consensus       156 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------~~~~~~~~~~~~~~--  216 (254)
                                 ..+...|+.+|.+.+.+++.+++.+   ++.+..+.|+.+.+|....      +...+.....+..+  
T Consensus       139 ~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~  215 (357)
T d1db3a_         139 VQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCL  215 (357)
T ss_dssp             CCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCE
T ss_pred             CCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceE
Confidence                       2245689999999999999888764   6888899998877764221      11111111111111  


Q ss_pred             ---CC---CCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        217 ---AP---QRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       217 ---~~---~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                         ..   ..+++++|++++++.++..+  .|+.+++..|..
T Consensus       216 ~~g~~~~~r~~~~v~D~~~a~~~~~~~~--~~~~yni~sg~~  255 (357)
T d1db3a_         216 YLGNMDSLRDWGHAKDYVKMQWMMLQQE--QPEDFVIATGVQ  255 (357)
T ss_dssp             EESCTTCEECCEEHHHHHHHHHHTTSSS--SCCCEEECCCCC
T ss_pred             EECCCCeeecceeechHHHHHHHHHhCC--CCCeEEECCCCc
Confidence               10   23678999999999888654  467888866643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=2.8e-19  Score=151.80  Aligned_cols=220  Identities=17%  Similarity=0.095  Sum_probs=152.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeC-------------C---Cch----hHHHHHHhCCCceEEecCCCCHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDL-------------P---TSE----GESVAKELGPDVKFAPVDVTSEE   63 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r-------------~---~~~----~~~~~~~~~~~~~~~~~Dls~~~   63 (254)
                      |++||||||+|.||.+++++|+++|++|++++.             +   ...    ........+.++.++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            689999999999999999999999999998861             0   011    11222223678999999999999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcE
Q psy12833         64 DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGV  143 (254)
Q Consensus        64 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~  143 (254)
                      .++++++..     ++|+|||.|+..... ...      .+.+.....+.+|+.++.++++++...-.         ..+
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~~-~s~------~~~~~~~~~~~~Nv~gt~nll~~~~~~~~---------~~~  139 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSAP-YSM------IDRSRAVYTQHNNVIGTLNVLFAIKEFGE---------ECH  139 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCHH-HHT------SCHHHHHHHHHHHHHHHHHHHHHHHHHCT---------TCE
T ss_pred             HHHHHHHhh-----cchheeccccccccc-ccc------ccccccccccccccccccHHHHHHHHhcc---------ccc
Confidence            999999876     899999999864322 111      35667778899999999999887765422         246


Q ss_pred             EEEEeccccccC------------------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccc
Q psy12833        144 IINTASIAAYEG------------------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL  199 (254)
Q Consensus       144 ii~vss~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~  199 (254)
                      +++.||...+..                        ..+...|+.+|.+.+.+++.+++++   ++.+..+.|+.+..+.
T Consensus       140 ~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         140 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             EEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             eeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence            777777654421                        2234569999999999998877754   6888888887776543


Q ss_pred             ccc-------------------chHHHHHHHHhcCCCC--------CCCCCHHHHHHHHHHHhcCCCcccceEEe
Q psy12833        200 LSM-------------------LNEKVRNFLARSIPAP--------QRLGHPDEFAQLVQSIITNPLINGEVIRI  247 (254)
Q Consensus       200 ~~~-------------------~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~~~~~~~G~~i~~  247 (254)
                      ...                   .............+..        ..+++++|+++++..++..+...|+...+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~  291 (393)
T d1i24a_         217 TDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVF  291 (393)
T ss_dssp             CTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEE
T ss_pred             ccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeee
Confidence            211                   1112222222221110        23568999999999999766566665444

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.83  E-value=1.2e-19  Score=152.67  Aligned_cols=225  Identities=19%  Similarity=0.163  Sum_probs=157.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEE-eeCCCch--hHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSE--GESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~-~~r~~~~--~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +||||||+|.||++++++|+++|++|++ +++....  .+.. ..+  ..++.++++|++|++++.++++..     ++|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHH-HhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            5899999999999999999999997554 4432211  1111 112  457899999999999999998866     799


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ----  156 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~----  156 (254)
                      +|||+|+.....          .+.++....+++|+.+..++.+.+........... ....+++++||.+.+...    
T Consensus        76 ~VihlAa~~~~~----------~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~  144 (361)
T d1kewa_          76 AVMHLAAESHVD----------RSITGPAAFIETNIVGTYALLEVARKYWSALGEDK-KNNFRFHHISTDEVYGDLPHPD  144 (361)
T ss_dssp             EEEECCSCCCHH----------HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH-HHHCEEEEEEEGGGGCCCCCGG
T ss_pred             EEEECccccchh----------hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-cCceEEEEeccceeeCCCccCC
Confidence            999999864321          23344567899999999999998887654310000 003589999998766321    


Q ss_pred             -----------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--chHHHHHHHHhcCCC
Q psy12833        157 -----------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPA  217 (254)
Q Consensus       157 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~  217 (254)
                                       .+...|+.+|.+.+.+++.++..+   |+++..++|+.+..|....  ..+.+........+.
T Consensus       145 ~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~  221 (361)
T d1kewa_         145 EVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPL  221 (361)
T ss_dssp             GSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCE
T ss_pred             ccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCc
Confidence                             134569999999999999988755   6889999998887764322  223333333333221


Q ss_pred             --C------CCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        218 --P------QRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       218 --~------~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                        .      ..+++++|+|+++..++..+. .|+.+++..|.
T Consensus       222 ~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~-~~~~~Ni~s~~  262 (361)
T d1kewa_         222 PIYGKGDQIRDWLYVEDHARALHMVVTEGK-AGETYNIGGHN  262 (361)
T ss_dssp             EEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTCEEEECCCC
T ss_pred             EEeCCCCeEEeCEEHHHHHHHHHHHHhcCC-CCCeEEECCCC
Confidence              0      125799999999999997542 47788887664

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1.2e-18  Score=145.06  Aligned_cols=220  Identities=15%  Similarity=0.094  Sum_probs=155.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch----hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE----GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++|||||+|.||+.++++|+++|++|++++|....    ..........++.++++|++|.+.+.++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            59999999999999999999999999998873322    22222223678999999999999998888865     7999


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-----
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-----  156 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-----  156 (254)
                      |||+|+.....          .+.++....+++|+.++.++++++...-          -.++|+.||.+.+.+.     
T Consensus        77 ViHlAa~~~~~----------~~~~~~~~~~~~Nv~gt~nlL~~~~~~~----------v~~~i~~Ss~~vy~~~~~~~~  136 (338)
T d1udca_          77 VIHFAGLKAVG----------ESVQKPLEYYDNNVNGTLRLISAMRAAN----------VKNFIFSSSATVYGDQPKIPY  136 (338)
T ss_dssp             EEECCSCCCHH----------HHHHCHHHHHHHHHHHHHHHHHHHHHHT----------CCEEEEEEEGGGGCSCCSSSB
T ss_pred             EEECCCccchh----------hHHhCHHHHHHhHHHHHHHHHHHHHHhC----------CCEEEecCcceEEcccccccc
Confidence            99999864211          2334566889999999999988777641          3579999998766322     


Q ss_pred             -------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------------cchHHHHHHHHhc-CC
Q psy12833        157 -------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------------MLNEKVRNFLARS-IP  216 (254)
Q Consensus       157 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------------~~~~~~~~~~~~~-~~  216 (254)
                             .+...|+.+|.+.+.+.+....++  .++.+..++|+.+..+...            .+.+......... .+
T Consensus       137 ~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  214 (338)
T d1udca_         137 VESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDS  214 (338)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSC
T ss_pred             ccccccCCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCC
Confidence                   246689999999999998777664  4678888888776654221            1222222222111 11


Q ss_pred             C--------------CCCCCCHHHHHHHHHHHhc--CCCcccceEEecCCcc
Q psy12833        217 A--------------PQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALR  252 (254)
Q Consensus       217 ~--------------~~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~  252 (254)
                      .              .+.+++++|++.+...+..  .....++++++.++..
T Consensus       215 i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~  266 (338)
T d1udca_         215 LAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_dssp             EEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSC
T ss_pred             EEEeCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCC
Confidence            0              0125689999988777664  3445678899887654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.82  E-value=1.4e-22  Score=155.65  Aligned_cols=150  Identities=14%  Similarity=0.164  Sum_probs=109.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |+||+++||||++|||+++++.|+++|++|++++|+.+++++..+++  ..++....+|++|.+++++++       +++
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~i   93 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-------KGA   93 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-------TTC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-------cCc
Confidence            68999999999999999999999999999999999999988888776  245667899999999887765       478


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC-CC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ-SG  158 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~-~~  158 (254)
                      |++|||||....    .      .+.++|+..+++|+.+.++....+.+.+...       ......+++.....+. .+
T Consensus        94 Dilin~Ag~g~~----~------~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~g  156 (191)
T d1luaa1          94 HFVFTAGAIGLE----L------LPQAAWQNESSIEIVADYNAQPPLGIGGIDA-------TDKGKEYGGKRAFGALGIG  156 (191)
T ss_dssp             SEEEECCCTTCC----C------BCHHHHHTCTTCCEEEECCCSSSCSBTTCCT-------TCEEEEETTEEEECHHHHH
T ss_pred             CeeeecCccccc----c------CCHHHHHhhhcceeehhHhhHHHHHHHhhhh-------ccCcEEecceEEEeccCcC
Confidence            999999986421    2      6889999999999877776543332222111       1122222222222111 12


Q ss_pred             CccchhchHHHHHhHHH
Q psy12833        159 QVAYSASKSGIVGMTLP  175 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~  175 (254)
                      ...|+.+|+++..++.+
T Consensus       157 ~~~y~~sk~a~~~l~~s  173 (191)
T d1luaa1         157 GLKLKLHRACIAKLFES  173 (191)
T ss_dssp             HHHHHHHHHHHHHHTSC
T ss_pred             cHHHHHHHHHHHHHHhc
Confidence            34699999998877643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.81  E-value=3e-18  Score=142.27  Aligned_cols=219  Identities=13%  Similarity=0.073  Sum_probs=152.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-----hhHHH---HHHh-CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-----EGESV---AKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-----~~~~~---~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |++|||||||.||++++++|.++|++|+.++|..+     +...+   .... ...+.++.+|+++.+++.+.++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            79999999999999999999999999999998543     11111   1111 356789999999999999988865   


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                        ++|++||+|+.....          ...++....+..|+.+...+..++.....+...     ..++++.||......
T Consensus        79 --~~D~Vih~Aa~~~~~----------~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ss~~~~~~  141 (339)
T d1n7ha_          79 --KPDEVYNLAAQSHVA----------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-----TVKYYQAGSSEMFGS  141 (339)
T ss_dssp             --CCSEEEECCSCCCHH----------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-----CCEEEEEEEGGGGTT
T ss_pred             --ccchhhhcccccccc----------ccccCccccccccccccchhhhhhhhccccccc-----ceeeeecccceeccc
Confidence              899999999864322          234556778899999999998888766554321     345666666544322


Q ss_pred             ----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------chHHHHHHHHhcCCC--
Q psy12833        156 ----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------LNEKVRNFLARSIPA--  217 (254)
Q Consensus       156 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------~~~~~~~~~~~~~~~--  217 (254)
                                ..+...|+.+|.+.+.++..+++.+   ++.+..++|+.+..|....      .............+.  
T Consensus       142 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~  218 (339)
T d1n7ha_         142 TPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLF  218 (339)
T ss_dssp             SCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEE
T ss_pred             CCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEE
Confidence                      2356789999999999998887754   6899999998887764321      111111222221111  


Q ss_pred             ------CCCCCCHHHHHHHHHHHhcCCCcccceEE
Q psy12833        218 ------PQRLGHPDEFAQLVQSIITNPLINGEVIR  246 (254)
Q Consensus       218 ------~~~~~~~~~va~~~~~l~~~~~~~G~~i~  246 (254)
                            ...+++++|+|+++..++..+...+..+.
T Consensus       219 ~g~~~~~rd~~~v~D~a~~~~~~~~~~~~~~~~~~  253 (339)
T d1n7ha_         219 LGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVA  253 (339)
T ss_dssp             ESCTTCEEECEEHHHHHHHHHHHHTSSSCCEEEEC
T ss_pred             eCCCCccccceeeehHHHHHHHHHhcCCCCccccc
Confidence                  02367899999999999976544444433

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1e-18  Score=135.40  Aligned_cols=200  Identities=15%  Similarity=0.096  Sum_probs=134.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |..|+++||||||+||++++++|.++|++|.++.|+.++++..   ...++.++.+|++|.+++.++++       +.|+
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~gD~~d~~~l~~al~-------~~d~   70 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc---cccccccccccccchhhHHHHhc-------CCCE
Confidence            4558899999999999999999999999999999998775432   23568999999999999888876       6899


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC--
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ--  159 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~--  159 (254)
                      +|+++|......           ..      +++..+..++++    .+.+..      -.++|++||.......+..  
T Consensus        71 vi~~~g~~~~~~-----------~~------~~~~~~~~~l~~----aa~~~~------v~r~i~~ss~~~~~~~~~~~~  123 (205)
T d1hdoa_          71 VIVLLGTRNDLS-----------PT------TVMSEGARNIVA----AMKAHG------VDKVVACTSAFLLWDPTKVPP  123 (205)
T ss_dssp             EEECCCCTTCCS-----------CC------CHHHHHHHHHHH----HHHHHT------CCEEEEECCGGGTSCTTCSCG
T ss_pred             EEEEeccCCchh-----------hh------hhhHHHHHHHHH----HHHhcC------CCeEEEEeeeeccCCCccccc
Confidence            999998642211           11      122334434433    344443      4689999987665443322  


Q ss_pred             --ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        160 --VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       160 --~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                        ..|...|...+.       .+...+++...++||.+..........    .... -..+...++.+|+|+.++..+..
T Consensus       124 ~~~~~~~~~~~~e~-------~l~~~~~~~tiirp~~~~~~~~~~~~~----~~~~-~~~~~~~i~~~DvA~~~~~~l~~  191 (205)
T d1hdoa_         124 RLQAVTDDHIRMHK-------VLRESGLKYVAVMPPHIGDQPLTGAYT----VTLD-GRGPSRVISKHDLGHFMLRCLTT  191 (205)
T ss_dssp             GGHHHHHHHHHHHH-------HHHHTCSEEEEECCSEEECCCCCSCCE----EESS-SCSSCSEEEHHHHHHHHHHTTSC
T ss_pred             cccccchHHHHHHH-------HHHhcCCceEEEecceecCCCCcccEE----EeeC-CCCCCCcCCHHHHHHHHHHHhCC
Confidence              233344443332       334578999999999885432211000    0000 11125568999999999999987


Q ss_pred             CCcccceEEecCC
Q psy12833        238 PLINGEVIRIDGA  250 (254)
Q Consensus       238 ~~~~G~~i~~~gG  250 (254)
                      +...|+.+.+.+-
T Consensus       192 ~~~~g~~~~~s~~  204 (205)
T d1hdoa_         192 DEYDGHSTYPSHQ  204 (205)
T ss_dssp             STTTTCEEEEECC
T ss_pred             CCCCCEEEecCCc
Confidence            7677999887653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2e-18  Score=143.96  Aligned_cols=208  Identities=16%  Similarity=0.079  Sum_probs=145.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-----hHH----HHHHhCCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-----GES----VAKELGPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-----~~~----~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |+||||||+|.||++++++|.++|++|+.++|..+.     ++.    .......++.++.+|++|++.+.+++.+.   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            344999999999999999999999999999996432     221    12222467899999999999999999877   


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG  155 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~  155 (254)
                        .+++++|+++.....          ...+.....+++|+.++.++.+++...-...       ..++|++||.+.+..
T Consensus        79 --~~~~v~~~~a~~~~~----------~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~-------~~~~i~~SS~~vyg~  139 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHVK----------ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN-------SVKFYQASTSELYGK  139 (347)
T ss_dssp             --CCSEEEECCSCCCHH----------HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT-------TCEEEEEEEGGGTCS
T ss_pred             --ccceeeeeeeccccc----------hhhccchhhhhhHHHHHHHHHHHHHHcCCCC-------CcEEEEecchheecC
Confidence              788999998864322          2334455668999999999988876543322       357999999775421


Q ss_pred             -----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------chHHHHHHHHhcCCCC
Q psy12833        156 -----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------LNEKVRNFLARSIPAP  218 (254)
Q Consensus       156 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------~~~~~~~~~~~~~~~~  218 (254)
                                 ..+...|+.||.+.+.+++.+++.+   ++.+..++|+.+..|....      ..........+..+..
T Consensus       140 ~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~  216 (347)
T d1t2aa_         140 VQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECF  216 (347)
T ss_dssp             CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCE
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCccee
Confidence                       1245679999999999998887764   6788888887776653211      1112222222222110


Q ss_pred             --------CCCCCHHHHHHHHHHHhcC
Q psy12833        219 --------QRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       219 --------~~~~~~~~va~~~~~l~~~  237 (254)
                              ..+++++|+++++..++..
T Consensus       217 ~~g~g~~~r~~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         217 SLGNLDAKRDWGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             EESCTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             ecCCCcceeeeeEecHHHHHHHHHhhc
Confidence                    2467999999999999964

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.80  E-value=4.9e-19  Score=147.66  Aligned_cols=218  Identities=15%  Similarity=0.092  Sum_probs=150.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +||+||||||+|.||++++++|.++|++|+.+.|+.++...+....     .....++..|+.|.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            6899999999999999999999999999999999876655543321     2334557789999988777665       


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-C
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-Q  156 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-~  156 (254)
                      ..|+++|+++.....          .+   ....+..|+.++.++++.+....   .      ..+++++||..+... .
T Consensus        83 ~~~~v~~~a~~~~~~----------~~---~~~~~~~nv~gt~~ll~~~~~~~---~------v~~~i~~SS~~~~~~~~  140 (342)
T d1y1pa1          83 GAAGVAHIASVVSFS----------NK---YDEVVTPAIGGTLNALRAAAATP---S------VKRFVLTSSTVSALIPK  140 (342)
T ss_dssp             TCSEEEECCCCCSCC----------SC---HHHHHHHHHHHHHHHHHHHHTCT---T------CCEEEEECCGGGTCCCC
T ss_pred             cchhhhhhccccccc----------cc---ccccccchhhhHHHHHHhhhccc---c------cccccccccceeeccCC
Confidence            689999999864311          22   34556789999888877655421   1      468999999754321 0


Q ss_pred             ------------------------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc-----
Q psy12833        157 ------------------------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS-----  201 (254)
Q Consensus       157 ------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~-----  201 (254)
                                                    .+...|+.+|.+.+.+++.+++.+. .++++..++|+.+-.+...     
T Consensus       141 ~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~  219 (342)
T d1y1pa1         141 PNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQS  219 (342)
T ss_dssp             TTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCC
T ss_pred             CCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccc
Confidence                                          1234699999999999999888764 4688888888777554321     


Q ss_pred             cchHHHHHHHHhcC-------CCCCCCCCHHHHHHHHHHHhcCCCcccceEEecCC
Q psy12833        202 MLNEKVRNFLARSI-------PAPQRLGHPDEFAQLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       202 ~~~~~~~~~~~~~~-------~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      ...........+..       ..+..+++++|+|.+++..+..+...|+.+...++
T Consensus       220 ~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~  275 (342)
T d1y1pa1         220 GSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAG  275 (342)
T ss_dssp             CHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCE
T ss_pred             cchHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCccccceEEEEcCC
Confidence            11112222111111       01133678999999998888776677877765543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.78  E-value=8e-18  Score=138.72  Aligned_cols=218  Identities=15%  Similarity=0.121  Sum_probs=151.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH-HHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE-SVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~-~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      |+||||||+|.||++++++|.++|++|+.++|...... ...+++  ..++.++.+|++|.+++.+.+...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            78999999999999999999999999999998654321 222222  356899999999999999888877     6788


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc-------
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE-------  154 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~-------  154 (254)
                      ++++++......          ..++....+..|+.++.+++.++...-.         ..++++.||.....       
T Consensus        76 ~~~~a~~~~~~~----------~~~~~~~~~~~n~~g~~~~l~~~~~~~~---------~~~~i~~Ss~~~~~~~~~~~~  136 (321)
T d1rpna_          76 VYNLAAQSFVGA----------SWNQPVTTGVVDGLGVTHLLEAIRQFSP---------ETRFYQASTSEMFGLIQAERQ  136 (321)
T ss_dssp             EEECCSCCCHHH----------HTTSHHHHHHHHTHHHHHHHHHHHHHCT---------TSEEEEEEEGGGGCSCSSSSB
T ss_pred             cccccccccccc----------cccchHHHHhhhhhchHHHHHHHHHhCC---------CcccccccchhhcCcccCCCC
Confidence            888887543221          2234567789999999998887765322         24677777755431       


Q ss_pred             ----CCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--c----hHHHHHHHHhcCCC--C----
Q psy12833        155 ----GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--L----NEKVRNFLARSIPA--P----  218 (254)
Q Consensus       155 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~----~~~~~~~~~~~~~~--~----  218 (254)
                          +..+...|+.+|.+.+.+.+.++..+   ++.+..+.|+.+..|....  .    ............+.  .    
T Consensus       137 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~  213 (321)
T d1rpna_         137 DENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVD  213 (321)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTT
T ss_pred             CCCCCccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCC
Confidence                12255789999999999998887765   6788888887766654211  1    11111211111111  0    


Q ss_pred             --CCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        219 --QRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       219 --~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                        ..+++++|+|+++..++..+.  +..+++.+|.
T Consensus       214 ~~r~~i~v~D~~~~~~~~~~~~~--~~~~ni~~~~  246 (321)
T d1rpna_         214 AKRDWGFAGDYVEAMWLMLQQDK--ADDYVVATGV  246 (321)
T ss_dssp             CEEECEEHHHHHHHHHHHHHSSS--CCCEEECCSC
T ss_pred             eEEccEEeHHHHHHHHHHHhcCC--cCCceecccc
Confidence              136899999999999997543  3456666554

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=1.1e-17  Score=140.21  Aligned_cols=218  Identities=17%  Similarity=0.093  Sum_probs=154.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |.++.+||||||+|.||++|+++|.++|++|+++++.......   ..-....+..+|+.+.+.+.++++       ++|
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   81 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT---EDMFCDEFHLVDLRVMENCLKVTE-------GVD   81 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC---GGGTCSEEEECCTTSHHHHHHHHT-------TCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhcccCcEEEeechhHHHHHHHhh-------cCC
Confidence            5678899999999999999999999999999999875443211   111356788899999887766664       789


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-----  155 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-----  155 (254)
                      .+||+|+.......         ..+.....+..|+.+..+++.++...    .      -.++|++||......     
T Consensus        82 ~Vih~a~~~~~~~~---------~~~~~~~~~~~n~~gt~~ll~~~~~~----~------vk~~i~~SS~~~~~~~~~~~  142 (363)
T d2c5aa1          82 HVFNLAADMGGMGF---------IQSNHSVIMYNNTMISFNMIEAARIN----G------IKRFFYASSACIYPEFKQLE  142 (363)
T ss_dssp             EEEECCCCCCCHHH---------HTTCHHHHHHHHHHHHHHHHHHHHHT----T------CSEEEEEEEGGGSCGGGSSS
T ss_pred             eEeecccccccccc---------cccccccccccccchhhHHHHhHHhh----C------cccccccccccccccccccc
Confidence            99999986543321         23455677888999998887776553    2      358999999876542     


Q ss_pred             -------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------c-hHHHHHHHHhcC
Q psy12833        156 -------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------L-NEKVRNFLARSI  215 (254)
Q Consensus       156 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------~-~~~~~~~~~~~~  215 (254)
                                   ..+...|+.+|.+.+.+++.+.+++   |+++..++|+.+..+....      . ............
T Consensus       143 ~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~  219 (363)
T d2c5aa1         143 TTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTD  219 (363)
T ss_dssp             SSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSS
T ss_pred             ccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccc
Confidence                         1235679999999999998887765   7899999998887653211      1 111111111111


Q ss_pred             CC--------CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        216 PA--------PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       216 ~~--------~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                      +.        ...+++++|++.++..++..+  .|+.+++-+|..
T Consensus       220 ~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~--~~~~~ni~~~~~  262 (363)
T d2c5aa1         220 RFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEM  262 (363)
T ss_dssp             CEEEESCSCCEECCEEHHHHHHHHHHHHHSS--CCSCEEECCCCC
T ss_pred             cccccCCCCeEEEEeehhHHHHHHHHHHhCC--CCCeEEEecCCc
Confidence            10        134789999999999988654  467788877754

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.77  E-value=8.1e-18  Score=140.35  Aligned_cols=214  Identities=21%  Similarity=0.220  Sum_probs=144.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC---c-hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPT---S-EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~---~-~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |+||||||||.||++++++|.++|+.|.++.++.   . ...........++.++.+|+.|.+.+..+++       ..|
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~~   75 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   75 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hhh
Confidence            5899999999999999999999998655544321   1 1111112225689999999999998888865       678


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-----  155 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-----  155 (254)
                      .++|.|+......          ...+....+++|+.+..+++......           ..++++.||...+..     
T Consensus        76 ~v~~~a~~~~~~~----------~~~~~~~~~~~N~~g~~nll~~~~~~-----------~~k~i~~ss~~vyg~~~~~~  134 (346)
T d1oc2a_          76 AIVHYAAESHNDN----------SLNDPSPFIHTNFIGTYTLLEAARKY-----------DIRFHHVSTDEVYGDLPLRE  134 (346)
T ss_dssp             EEEECCSCCCHHH----------HHHCCHHHHHHHTHHHHHHHHHHHHH-----------TCEEEEEEEGGGGCCBCCGG
T ss_pred             hhhhhhhcccccc----------hhhCcccceeeehHhHHhhhhhhccc-----------cccccccccceEecccCccc
Confidence            8999988654321          22334567899999999998766443           246777777665421     


Q ss_pred             ------------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc--cchHH-HHHHHHhc
Q psy12833        156 ------------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEK-VRNFLARS  214 (254)
Q Consensus       156 ------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~--~~~~~-~~~~~~~~  214 (254)
                                        ..+...|+.+|.+.+.+++.+.+++   ++++..++|+.+..|...  ..... +.....+.
T Consensus       135 ~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~  211 (346)
T d1oc2a_         135 DLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGI  211 (346)
T ss_dssp             GSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTC
T ss_pred             cccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCC
Confidence                              1134679999999999998887764   799999999988776432  11122 22112221


Q ss_pred             CC-C------CCCCCCHHHHHHHHHHHhcCCCcccceEEecCC
Q psy12833        215 IP-A------PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       215 ~~-~------~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      .+ .      ...+++++|+|++++.++..+.. |..+++-+|
T Consensus       212 ~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~-~~~~~~~~~  253 (346)
T d1oc2a_         212 KPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM-GETYLIGAD  253 (346)
T ss_dssp             CCEEETTSCCEEECEEHHHHHHHHHHHHHHCCT-TCEEEECCS
T ss_pred             ceeEeCCCCccccccchhhHHHHHHHHHhhccc-Ccccccccc
Confidence            11 1      03467999999999888865543 444444433

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.77  E-value=2.4e-17  Score=136.40  Aligned_cols=221  Identities=18%  Similarity=0.159  Sum_probs=144.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC--chhHHHHH-HhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPT--SEGESVAK-ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~--~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +||||||+|.||++++++|.++|++|+.+++-.  ...+.... ....++.++.+|++|.+++.++++..     ++|++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            689999999999999999999999999887522  22222211 11467999999999999999999877     79999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-------
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-------  155 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-------  155 (254)
                      ||+|+.....          ...++....+++|+.++.++++++...-          ..+.++.||.....+       
T Consensus        77 ih~aa~~~~~----------~~~~~~~~~~~~Nv~gt~nll~~~~~~~----------~~~~i~~sS~~~~~~~~~~~~~  136 (338)
T d1orra_          77 FHLAGQVAMT----------TSIDNPCMDFEINVGGTLNLLEAVRQYN----------SNCNIIYSSTNKVYGDLEQYKY  136 (338)
T ss_dssp             EECCCCCCHH----------HHHHCHHHHHHHHHHHHHHHHHHHHHHC----------TTCEEEEEEEGGGGTTCTTSCE
T ss_pred             Eeeccccccc----------ccccChHHHHHHHHHHHHHHHHhhhccc----------cccccccccccccccccccccc
Confidence            9999865322          1334567889999999999988766532          234444454433321       


Q ss_pred             ---------------------CCCCccchhchHHHHHhHHHHHHHhccCCc--EEEEEecCCccccccccchHHHHHHHH
Q psy12833        156 ---------------------QSGQVAYSASKSGIVGMTLPMARDLAGAGI--RVNTIAPGLFDTPLLSMLNEKVRNFLA  212 (254)
Q Consensus       156 ---------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i--~v~~v~Pg~~~t~~~~~~~~~~~~~~~  212 (254)
                                           ..+...|+.+|...+.+.......+....+  +...+.++...................
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (338)
T d1orra_         137 NETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAV  216 (338)
T ss_dssp             EECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHH
T ss_pred             ccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHH
Confidence                                 124567899999999988888777643221  222233333333222222222222211


Q ss_pred             h-c------CCCC------CCCCCHHHHHHHHHHHhcC-CCcccceEEecCCc
Q psy12833        213 R-S------IPAP------QRLGHPDEFAQLVQSIITN-PLINGEVIRIDGAL  251 (254)
Q Consensus       213 ~-~------~~~~------~~~~~~~~va~~~~~l~~~-~~~~G~~i~~~gG~  251 (254)
                      + .      ++..      ..+.+++|++++++.++.. ....|+++.+.+|.
T Consensus       217 ~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~  269 (338)
T d1orra_         217 EIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTI  269 (338)
T ss_dssp             HHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCG
T ss_pred             HHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhccccccCccccccccc
Confidence            1 0      1000      2356899999999999864 45678888886653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=9.5e-18  Score=138.06  Aligned_cols=210  Identities=14%  Similarity=0.161  Sum_probs=142.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      |++|||||+|.||++++++|.++|++|+.+++......+.....  ..++.....|+.+.            .+.++|+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~~d~V   69 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP------------LYIEVDQI   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC------------CCCCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH------------HHcCCCEE
Confidence            78999999999999999999999999999887433222111221  23344555555321            12379999


Q ss_pred             EeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-------
Q psy12833         83 VNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-------  155 (254)
Q Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-------  155 (254)
                      ||+|+......          ..++..+.+++|+.+..++++++...           ..++|++||.+.+..       
T Consensus        70 ihlAa~~~~~~----------~~~~~~~~~~~Nv~g~~~ll~~~~~~-----------~~k~I~~SS~~vy~~~~~~~~~  128 (312)
T d2b69a1          70 YHLASPASPPN----------YMYNPIKTLKTNTIGTLNMLGLAKRV-----------GARLLLASTSEVYGDPEVHPQS  128 (312)
T ss_dssp             EECCSCCSHHH----------HTTCHHHHHHHHHHHHHHHHHHHHHH-----------TCEEEEEEEGGGGBSCSSSSBC
T ss_pred             EECcccCCchh----------HHhCHHHHHHHHHHHHHHHHHHHHHc-----------CCcEEEEEChheecCCCCCCCC
Confidence            99998653221          12345677899999999998876532           247999999766532       


Q ss_pred             ---------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----chHHHHHHHHhcCC--C--C
Q psy12833        156 ---------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----LNEKVRNFLARSIP--A--P  218 (254)
Q Consensus       156 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----~~~~~~~~~~~~~~--~--~  218 (254)
                               ..+...|+.+|.+.+.+++.+++.+   |+.+..++|+.+..|....    ..+.+.......-+  .  .
T Consensus       129 e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~  205 (312)
T d2b69a1         129 EDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS  205 (312)
T ss_dssp             TTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESS
T ss_pred             ccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCC
Confidence                     1245679999999999999888765   7899999999998764322    12222222222111  1  0


Q ss_pred             ----CCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        219 ----QRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       219 ----~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                          ..+++++|++++++.++...  .+..+++.+|..
T Consensus       206 g~~~r~~i~v~D~~~~~~~~~~~~--~~~~~n~~~~~~  241 (312)
T d2b69a1         206 GSQTRAFQYVSDLVNGLVALMNSN--VSSPVNLGNPEE  241 (312)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHTSS--CCSCEEESCCCE
T ss_pred             CCeeEccEEHHHHHHHHHHHHhhc--cCCceEecCCcc
Confidence                24678999999999888643  345677776654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=1.1e-17  Score=139.57  Aligned_cols=166  Identities=19%  Similarity=0.173  Sum_probs=124.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc-h---hHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS-E---GESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~-~---~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      |+||||||+|.||++++++|+++|++|+++++... .   ..........++.++.+|+.|.++++++++..     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            79999999999999999999999999999876322 1   22222233678999999999999999988755     799


Q ss_pred             EEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC-----
Q psy12833         81 VNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG-----  155 (254)
Q Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~-----  155 (254)
                      +|||+|+.....          ...+.......+|+.+..++.+++...    +      ..+++++||...+..     
T Consensus        77 ~VihlAa~~~~~----------~~~~~~~~~~~~N~~~t~~ll~~~~~~----~------i~~~i~~SS~~vyg~~~~~~  136 (347)
T d1z45a2          77 SVIHFAGLKAVG----------ESTQIPLRYYHNNILGTVVLLELMQQY----N------VSKFVFSSSATVYGDATRFP  136 (347)
T ss_dssp             EEEECCSCCCHH----------HHHHSHHHHHHHHHHHHHHHHHHHHHH----T------CCEEEEEEEGGGGCCGGGST
T ss_pred             EEEEcccccccc----------ccccCcccccccchhhhHHHHHHHHhc----c------cceEEeecceeeecCcccCC
Confidence            999999965322          123444677889999999998887542    1      358999999776531     


Q ss_pred             ----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcc
Q psy12833        156 ----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFD  196 (254)
Q Consensus       156 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~  196 (254)
                                ..+...|+.+|.+.+.+++.+.+.. ..++++..++|+.+.
T Consensus       137 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~  186 (347)
T d1z45a2         137 NMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPI  186 (347)
T ss_dssp             TCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEE
T ss_pred             CCCccccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceE
Confidence                      1245679999999999998887654 346777777765443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=5.7e-17  Score=134.82  Aligned_cols=219  Identities=16%  Similarity=0.057  Sum_probs=154.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch----hHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE----GESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~----~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +-|++|||||||.||++++++|.++|++|+.++|....    .+......    ..++.++.+|+.|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            45899999999999999999999999999999873321    11121111    3568899999999886665544    


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                         ..+.++|.++.....          ...++....+++|+.+..++.+++...    +      ..++|++||...+.
T Consensus        91 ---~~~~v~~~~a~~~~~----------~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~------~~~~i~~SS~~vyg  147 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSVP----------RSINDPITSNATNIDGFLNMLIAARDA----K------VQSFTYAASSSTYG  147 (341)
T ss_dssp             ---TCSEEEECCSCCCHH----------HHHHCHHHHHHHHTHHHHHHHHHHHHT----T------CSEEEEEEEGGGGT
T ss_pred             ---ccccccccccccccc----------ccccCccchhheeehhHHHHHHHHHhc----C------CceEEEcccceeeC
Confidence               778888888754321          245667778999999999998877553    2      35899999987654


Q ss_pred             C-----------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccc------cchHHHHHHHHhcCCC
Q psy12833        155 G-----------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS------MLNEKVRNFLARSIPA  217 (254)
Q Consensus       155 ~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~~~~~~~~~~~  217 (254)
                      .           ..+...|+.+|.+.+.+++.+++..   ++++..++|+.+.++...      .+............+.
T Consensus       148 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i  224 (341)
T d1sb8a_         148 DHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDV  224 (341)
T ss_dssp             TCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCC
T ss_pred             CCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCce
Confidence            2           2245789999999999999888765   678888888777654321      1222222222222111


Q ss_pred             --------CCCCCCHHHHHHHHHHHhc-CCCcccceEEecCCc
Q psy12833        218 --------PQRLGHPDEFAQLVQSIIT-NPLINGEVIRIDGAL  251 (254)
Q Consensus       218 --------~~~~~~~~~va~~~~~l~~-~~~~~G~~i~~~gG~  251 (254)
                              ...+++++|++.++..++. .....|+.+.+..+.
T Consensus       225 ~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~  267 (341)
T d1sb8a_         225 YINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGG  267 (341)
T ss_dssp             EEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSC
T ss_pred             EEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeecccc
Confidence                    0347899999999998885 345678888876543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.7e-17  Score=135.02  Aligned_cols=221  Identities=16%  Similarity=0.107  Sum_probs=151.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC------Cc----hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLP------TS----EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~------~~----~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      |+||||||+|.||++++++|+++|++|+.+++.      ..    ..+........++.++++|++|.+++.+++...  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY--   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc--
Confidence            789999999999999999999999999988641      11    222222233678999999999999998888754  


Q ss_pred             HcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecccccc
Q psy12833         75 SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYE  154 (254)
Q Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~  154 (254)
                         .+++++|+|+.....          ...++....+++|+.+..++.+++..    .+      -.++++.||.....
T Consensus        81 ---~~~~i~h~Aa~~~~~----------~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~------v~~~i~~ss~~~~~  137 (346)
T d1ek6a_          81 ---SFMAVIHFAGLKAVG----------ESVQKPLDYYRVNLTGTIQLLEIMKA----HG------VKNLVFSSSATVYG  137 (346)
T ss_dssp             ---CEEEEEECCSCCCHH----------HHHHCHHHHHHHHHHHHHHHHHHHHH----TT------CCEEEEEEEGGGGC
T ss_pred             ---ccccccccccccCcH----------hhHhCHHHHHHhhhcccccccchhhh----cC------cccccccccceeee
Confidence               788999999865322          23344567789999999888776543    22      35788988876553


Q ss_pred             CC------------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc------------ccchHHHHHH
Q psy12833        155 GQ------------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNF  210 (254)
Q Consensus       155 ~~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~------------~~~~~~~~~~  210 (254)
                      ..            .+...|+.+|...+...+.+++.  ..+.....+.|+.+.++..            ....+.....
T Consensus       138 ~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  215 (346)
T d1ek6a_         138 NPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQV  215 (346)
T ss_dssp             SCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHH
T ss_pred             ccccccccccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHH
Confidence            21            24457999999999888876653  3467777777766654321            1112222222


Q ss_pred             HHh-cC---------CCC-----CCCCCHHHHHHHHHHHhc--CCCcccceEEecCCcc
Q psy12833        211 LAR-SI---------PAP-----QRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGALR  252 (254)
Q Consensus       211 ~~~-~~---------~~~-----~~~~~~~~va~~~~~l~~--~~~~~G~~i~~~gG~~  252 (254)
                      ... ..         +..     +.+++++|+|.++..++.  .....++++++.+|..
T Consensus       216 ~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~  274 (346)
T d1ek6a_         216 AIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG  274 (346)
T ss_dssp             HHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC
T ss_pred             HHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCc
Confidence            111 11         110     236899999999888763  3455678899887754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=3.4e-17  Score=136.17  Aligned_cols=213  Identities=18%  Similarity=0.195  Sum_probs=148.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++|||||||.||++++++|+++| ++|+.+++..+...+..+  ..++.++++|+++.+++.+.+.   +   ++|++||
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~--~~~~~~i~~Di~~~~~~~~~~~---~---~~d~Vih   73 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHV---K---KCDVVLP   73 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHH---H---HCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc--CCCeEEEECccCChHHHHHHHH---h---CCCcccc
Confidence            59999999999999999999999 589988887655444332  4679999999998776554322   1   5899999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--------  156 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--------  156 (254)
                      +|+.....          ...++....+++|+.+..++++++...           ..++++.||.......        
T Consensus        74 ~a~~~~~~----------~~~~~~~~~~~~nv~gt~~ll~~~~~~-----------~~~~~~~ss~~~~~~~~~~~~~~~  132 (342)
T d2blla1          74 LVAIATPI----------EYTRNPLRVFELDFEENLRIIRYCVKY-----------RKRIIFPSTSEVYGMCSDKYFDED  132 (342)
T ss_dssp             CBCCCCHH----------HHHHSHHHHHHHHTHHHHHHHHHHHHT-----------TCEEEEECCGGGGBTCCCSSBCTT
T ss_pred             cccccccc----------ccccCCccccccccccccccccccccc-----------cccccccccccccccccccccccc
Confidence            99975432          123444677899999999998886442           2456667776544321        


Q ss_pred             ----------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc----------chHHHHHHHHhcCC
Q psy12833        157 ----------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM----------LNEKVRNFLARSIP  216 (254)
Q Consensus       157 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~----------~~~~~~~~~~~~~~  216 (254)
                                .+...|+.+|.+.+.+++.+++.+   |+.+..+.|..+..+....          ....+.......-+
T Consensus       133 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  209 (342)
T d2blla1         133 HSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP  209 (342)
T ss_dssp             TCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCC
T ss_pred             cccccccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCC
Confidence                      134579999999999999888765   6888888887776653211          11222222222111


Q ss_pred             --------CCCCCCCHHHHHHHHHHHhcC--CCcccceEEecCC
Q psy12833        217 --------APQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGA  250 (254)
Q Consensus       217 --------~~~~~~~~~~va~~~~~l~~~--~~~~G~~i~~~gG  250 (254)
                              ....+++++|+++++..++..  +...|+++++.+|
T Consensus       210 ~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         210 IKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             EEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             ccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence                    102377999999999999964  3456899999544

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.75  E-value=5.8e-17  Score=135.27  Aligned_cols=211  Identities=15%  Similarity=0.069  Sum_probs=151.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      .+||+||||||||.||+++++.|.++|++|++++|+........+..  ..++.++.+|++|++++.++++..     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            37899999999999999999999999999999999877655544433  457999999999999999988877     89


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC----
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG----  155 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~----  155 (254)
                      |+++|+|+.....          ...+.....+.+|+.+..++++++...-.         ...++..||......    
T Consensus        81 ~~v~~~aa~~~~~----------~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~---------~~~~~~~s~~~~~~~~~~~  141 (356)
T d1rkxa_          81 EIVFHMAAQPLVR----------LSYSEPVETYSTNVMGTVYLLEAIRHVGG---------VKAVVNITSDKCYDNKEWI  141 (356)
T ss_dssp             SEEEECCSCCCHH----------HHHHCHHHHHHHHTHHHHHHHHHHHHHCC---------CCEEEEECCGGGBCCCCSS
T ss_pred             hhhhhhhcccccc----------ccccCCccccccccccchhhhhhhhcccc---------ccccccccccccccccccc
Confidence            9999999864322          23455677889999999988877765321         234555555443321    


Q ss_pred             --------CCCCccchhchHHHHHhHHHHHHHhc------cCCcEEEEEecCCcccccc---ccchHHHHHHHHhcCC--
Q psy12833        156 --------QSGQVAYSASKSGIVGMTLPMARDLA------GAGIRVNTIAPGLFDTPLL---SMLNEKVRNFLARSIP--  216 (254)
Q Consensus       156 --------~~~~~~Y~~sK~a~~~~~~~la~e~~------~~~i~v~~v~Pg~~~t~~~---~~~~~~~~~~~~~~~~--  216 (254)
                              ..+...|+.+|...+.+.+.++.++.      ..++.+..+.|+.+..+..   ..+...+........+  
T Consensus       142 ~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~  221 (356)
T d1rkxa_         142 WGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVI  221 (356)
T ss_dssp             SCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEE
T ss_pred             cccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceE
Confidence                    12456799999999999988887763      3478888999887765432   1222333333333221  


Q ss_pred             --C---CCCCCCHHHHHHHHHHHhc
Q psy12833        217 --A---PQRLGHPDEFAQLVQSIIT  236 (254)
Q Consensus       217 --~---~~~~~~~~~va~~~~~l~~  236 (254)
                        .   ...+.+++|++.++..++.
T Consensus       222 ~~~~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         222 IRNPHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             CSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             Eeeccccccccccccccchhhhhhh
Confidence              0   0245688999999888875

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.74  E-value=1.1e-17  Score=138.15  Aligned_cols=216  Identities=20%  Similarity=0.207  Sum_probs=151.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEE------EeeCCC--chhHHHHH-HhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVV------LCDLPT--SEGESVAK-ELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~------~~~r~~--~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++|||||+|.||++++++|.++|+.|.      ..++..  ........ +...++.++.+|+++.........      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR------   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc------
Confidence            599999999999999999999997543      333211  11111111 124678999999999987665443      


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ  156 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~  156 (254)
                       .+|+++|+|+.....          .........+++|+.+..++++++..    ..      ..++|++||.+.+.+.
T Consensus        76 -~~d~vi~~a~~~~~~----------~~~~~~~~~~~~N~~gt~~ll~~~~~----~~------~~~~I~~Ss~~~yg~~  134 (322)
T d1r6da_          76 -GVDAIVHFAAESHVD----------RSIAGASVFTETNVQGTQTLLQCAVD----AG------VGRVVHVSTNQVYGSI  134 (322)
T ss_dssp             -TCCEEEECCSCCCHH----------HHHHCCHHHHHHHTHHHHHHHHHHHH----TT------CCEEEEEEEGGGGCCC
T ss_pred             -ccceEEeeccccccc----------ccccchHHHhhhhHHHHHHHHHHHHH----cC------CceEEEeecceeecCC
Confidence             789999999875433          23344566788999999999887754    22      3589999998776432


Q ss_pred             -----------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc--chHHHHHHHHhcCCC----C-
Q psy12833        157 -----------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPA----P-  218 (254)
Q Consensus       157 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~----~-  218 (254)
                                 .+...|+.+|.+.+.+++.+++++   ++.+..++|+.+..|....  ..+.+.......-+.    . 
T Consensus       135 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g  211 (322)
T d1r6da_         135 DSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDG  211 (322)
T ss_dssp             SSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTS
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCC
Confidence                       245689999999999999998765   7899999998887764322  223333333222221    0 


Q ss_pred             ---CCCCCHHHHHHHHHHHhcCCCcccceEEecCCcc
Q psy12833        219 ---QRLGHPDEFAQLVQSIITNPLINGEVIRIDGALR  252 (254)
Q Consensus       219 ---~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~~  252 (254)
                         ..+++++|+|+++..++..+. .|+++++..|..
T Consensus       212 ~~~r~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~  247 (322)
T d1r6da_         212 ANVREWVHTDDHCRGIALVLAGGR-AGEIYHIGGGLE  247 (322)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHCC-TTCEEEECCCCE
T ss_pred             CeEEccEEHHHHHHHHHHHHhCCC-CCCeeEEeeccc
Confidence               236799999999999997543 578888876654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=1.1e-17  Score=131.94  Aligned_cols=221  Identities=11%  Similarity=0.017  Sum_probs=142.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCE--EEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGR--VVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++||||||+|.||++++++|+++|+.  |+...|+++..    .++..+++++.+|++|.+++.++++       ++|.+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   72 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK----EKIGGEADVFIGDITDADSINPAFQ-------GIDAL   72 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH----HHTTCCTTEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH----HhccCCcEEEEeeeccccccccccc-------cceee
Confidence            69999999999999999999999975  55566765443    3445789999999999999888776       78999


Q ss_pred             EeCCccCCCccccc-c--CCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         83 VNCAGISCAFKIFN-Y--NKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        83 i~~ag~~~~~~~~~-~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      ||+++......... .  ................+|+.+...+........          .+...+.++.....+..+.
T Consensus        73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~s~~~~~~~~~~~  142 (252)
T d2q46a1          73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG----------VKHIVVVGSMGGTNPDHPL  142 (252)
T ss_dssp             EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT----------CSEEEEEEETTTTCTTCGG
T ss_pred             EEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc----------ccccccccccccCCCCccc
Confidence            99998654322111 0  011112223345566788888877766554432          4677778887766665444


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPL  239 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  239 (254)
                      ..+..++.........  ......|+++..++|+.+..+......... .............++++|+|++++.++..+.
T Consensus       143 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~  219 (252)
T d2q46a1         143 NKLGNGNILVWKRKAE--QYLADSGTPYTIIRAGGLLDKEGGVRELLV-GKDDELLQTDTKTVPRADVAEVCIQALLFEE  219 (252)
T ss_dssp             GGGGGCCHHHHHHHHH--HHHHHSSSCEEEEEECEEECSCTTSSCEEE-ESTTGGGGSSCCEEEHHHHHHHHHHHTTCGG
T ss_pred             ccccccchhhhhhhhh--hhhhcccccceeecceEEECCCcchhhhhh-ccCcccccCCCCeEEHHHHHHHHHHHhCCcc
Confidence            4444444333222211  222346899999999998766432210000 0000000111456789999999999998777


Q ss_pred             cccceEEecC
Q psy12833        240 INGEVIRIDG  249 (254)
Q Consensus       240 ~~G~~i~~~g  249 (254)
                      ..|+++++-+
T Consensus       220 ~~g~~~~i~~  229 (252)
T d2q46a1         220 AKNKAFDLGS  229 (252)
T ss_dssp             GTTEEEEEEE
T ss_pred             ccCcEEEEee
Confidence            7899998854

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.9e-17  Score=130.56  Aligned_cols=200  Identities=15%  Similarity=0.114  Sum_probs=137.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      |++|++|||||||.||++++++|.++|.  +|++++|++......   ...++....+|+.+.+++.+.+       ...
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---~~~~i~~~~~D~~~~~~~~~~~-------~~~   81 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---AYKNVNQEVVDFEKLDDYASAF-------QGH   81 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---GGGGCEEEECCGGGGGGGGGGG-------SSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---ccceeeeeeecccccccccccc-------ccc
Confidence            5679999999999999999999999995  899999976543321   1245777788888766554444       378


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCC
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ  159 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~  159 (254)
                      |++|||+|..             ..........++|+.++..+++.+..    .+      -.+++++|+.......  .
T Consensus        82 d~vi~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~a~~----~~------v~~fi~~Ss~~~~~~~--~  136 (232)
T d2bkaa1          82 DVGFCCLGTT-------------RGKAGAEGFVRVDRDYVLKSAELAKA----GG------CKHFNLLSSKGADKSS--N  136 (232)
T ss_dssp             SEEEECCCCC-------------HHHHHHHHHHHHHTHHHHHHHHHHHH----TT------CCEEEEECCTTCCTTC--S
T ss_pred             cccccccccc-------------ccccchhhhhhhcccccceeeecccc----cC------ccccccCCccccccCc--c
Confidence            9999999853             12344556678899888888777643    22      4689999998776543  3


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCc-EEEEEecCCccccccccch-HHHHHHHHhcCCCC---CCCCCHHHHHHHHHHH
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGI-RVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAP---QRLGHPDEFAQLVQSI  234 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~va~~~~~l  234 (254)
                      ..|+.+|...+...+.       .+. ++..++||.+..+...... +.....+...++..   ...++++|+|++++..
T Consensus       137 ~~Y~~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~  209 (232)
T d2bkaa1         137 FLYLQVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNN  209 (232)
T ss_dssp             SHHHHHHHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHH
T ss_pred             chhHHHHHHhhhcccc-------ccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHH
Confidence            4699999877765433       233 5788999999876543322 22222232222221   2346789999999988


Q ss_pred             hcCCCcccc
Q psy12833        235 ITNPLINGE  243 (254)
Q Consensus       235 ~~~~~~~G~  243 (254)
                      +..+...+.
T Consensus       210 ~~~~~~~~~  218 (232)
T d2bkaa1         210 VVRPRDKQM  218 (232)
T ss_dssp             HTSCCCSSE
T ss_pred             HhcCccCCe
Confidence            865544443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=5.7e-16  Score=127.16  Aligned_cols=188  Identities=12%  Similarity=0.110  Sum_probs=134.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |+||||||+|.||++|+++|+++|+.++++++..                 ++|+.|.+.+.++++.-     .+|+++|
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------~~~~~~~~~~~~~~~~~-----~~d~v~~   60 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------ELNLLDSRAVHDFFASE-----RIDQVYL   60 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------TCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------hccccCHHHHHHHHhhc-----CCCEEEE
Confidence            7899999999999999999999999988765532                 26899999998887744     7999999


Q ss_pred             CCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCC--------
Q psy12833         85 CAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--------  156 (254)
Q Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~--------  156 (254)
                      +|+......         .........+..|+.++.++++++...    +      -.++|++||.+.+.+.        
T Consensus        61 ~a~~~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~------v~~~i~~SS~~vyg~~~~~~~~E~  121 (315)
T d1e6ua_          61 AAAKVGGIV---------ANNTYPADFIYQNMMIESNIIHAAHQN----D------VNKLLFLGSSCIYPKLAKQPMAES  121 (315)
T ss_dssp             CCCCCCCHH---------HHHHCHHHHHHHHHHHHHHHHHHHHHT----T------CCEEEEECCGGGSCTTCCSSBCGG
T ss_pred             cchhccccc---------cchhhHHHHHHHHHHHHHHHHHHHHHc----C------CCEEEEECCceEcCCCCCCCccCC
Confidence            987643322         123444556788999999988776553    2      3579999998876432        


Q ss_pred             --------CCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccccc------chHHH-----HHHHHhc---
Q psy12833        157 --------SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------LNEKV-----RNFLARS---  214 (254)
Q Consensus       157 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~------~~~~~-----~~~~~~~---  214 (254)
                              ++...|+.+|.+.+.+++.+.++.   |+++..++|+.+..|....      .....     .......   
T Consensus       122 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (315)
T d1e6ua_         122 ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDV  198 (315)
T ss_dssp             GTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEE
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCce
Confidence                    123469999999999999988765   7899999998887653221      11111     1111111   


Q ss_pred             ------CCCCCCCCCHHHHHHHHHHHhcC
Q psy12833        215 ------IPAPQRLGHPDEFAQLVQSIITN  237 (254)
Q Consensus       215 ------~~~~~~~~~~~~va~~~~~l~~~  237 (254)
                            .+. ..+.+++|++.++..++..
T Consensus       199 ~~~g~g~~~-~~~~~v~d~~~~~~~~~~~  226 (315)
T d1e6ua_         199 VVWGSGTPM-REFLHVDDMAAASIHVMEL  226 (315)
T ss_dssp             EEESCSCCE-ECEEEHHHHHHHHHHHHHS
T ss_pred             EEcCCCceE-EEEEEeehhHHHHHHhhhh
Confidence                  111 3456899999999888853

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.66  E-value=1.1e-14  Score=122.57  Aligned_cols=167  Identities=23%  Similarity=0.195  Sum_probs=120.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHH-cCCEEEEeeC---------CCchhHHHHHHh-----------CCCceEEecCCCCHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVR-EGGRVVLCDL---------PTSEGESVAKEL-----------GPDVKFAPVDVTSEE   63 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~-~g~~v~~~~r---------~~~~~~~~~~~~-----------~~~~~~~~~Dls~~~   63 (254)
                      -+||||||+|.||++++++|++ .|++|+++++         ..+..++....+           ..++.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            3799999999999999999985 6899998864         111122222111           345788999999999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcE
Q psy12833         64 DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGV  143 (254)
Q Consensus        64 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~  143 (254)
                      .++++++..    .++|+|||+|+......          ..+.....+++|+.+...++++....    .      ..+
T Consensus        83 ~l~~~~~~~----~~~d~ViH~Aa~~~~~~----------~~~~~~~~~~~N~~~t~~~l~~~~~~----~------~~~  138 (383)
T d1gy8a_          83 FLNGVFTRH----GPIDAVVHMCAFLAVGE----------SVRDPLKYYDNNVVGILRLLQAMLLH----K------CDK  138 (383)
T ss_dssp             HHHHHHHHS----CCCCEEEECCCCCCHHH----------HHHCHHHHHHHHHHHHHHHHHHHHHT----T------CCE
T ss_pred             Hhhhhhhcc----ceeehhhcccccccccc----------cccccccccccccccccccchhhhcc----C------Ccc
Confidence            888887643    47899999998654321          23445567889999999888776643    2      356


Q ss_pred             EEEEeccccccC------------------CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccc
Q psy12833        144 IINTASIAAYEG------------------QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP  198 (254)
Q Consensus       144 ii~vss~~~~~~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~  198 (254)
                      +++.+|......                  ..+...|+.+|.+.+.+++.+...+   |+.+.+++|+.+..+
T Consensus       139 ~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~  208 (383)
T d1gy8a_         139 IIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGA  208 (383)
T ss_dssp             EEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECC
T ss_pred             cccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeecc
Confidence            777776654421                  1245789999999999998887754   688888888776554

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.54  E-value=1.3e-13  Score=110.64  Aligned_cols=191  Identities=16%  Similarity=0.174  Sum_probs=126.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||||.||++++++|.++|++|+.++|+.                  +|+.|.++++++++..     ++|++||+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------~D~~d~~~~~~~l~~~-----~~d~vih~   59 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------LDITNVLAVNKFFNEK-----KPNVVINC   59 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------CCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------ccCCCHHHHHHHHHHc-----CCCEEEee
Confidence            599999999999999999999999999998852                  5899999999988866     78999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC----------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG----------  155 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~----------  155 (254)
                      ++.....          .........+..|+.....+.......           ...+++.||...+..          
T Consensus        60 a~~~~~~----------~~~~~~~~~~~~n~~~~~~~~~~~~~~-----------~~~~~~~ss~~v~~~~~~~~~~e~~  118 (281)
T d1vl0a_          60 AAHTAVD----------KCEEQYDLAYKINAIGPKNLAAAAYSV-----------GAEIVQISTDYVFDGEAKEPITEFD  118 (281)
T ss_dssp             CCCCCHH----------HHHHCHHHHHHHHTHHHHHHHHHHHHH-----------TCEEEEEEEGGGSCSCCSSCBCTTS
T ss_pred             ccccccc----------cccccchhhcccccccccccccccccc-----------cccccccccceeeeccccccccccc
Confidence            8864322          122333455666766665554443332           245666666543321          


Q ss_pred             -CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHHHHhcCC------CCCCCCCHHHHH
Q psy12833        156 -QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP------APQRLGHPDEFA  228 (254)
Q Consensus       156 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va  228 (254)
                       ..+...|+.+|...+.+.+.       .+.+...+.|+.+..+.... ...+........+      ......+++|++
T Consensus       119 ~~~~~~~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~  190 (281)
T d1vl0a_         119 EVNPQSAYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNF-VKTMINLGKTHDELKVVHDQVGTPTSTVDLA  190 (281)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCH-HHHHHHHHHHCSEEEEESSCEECCEEHHHHH
T ss_pred             cccchhhhhhhhhHHHHHHHH-------hCCCccccceeEEeCCCccc-ccchhhhhccCCceeecCCceeccchhhhhh
Confidence             22456788888876655533       35678889999997764332 2222222222211      113567999999


Q ss_pred             HHHHHHhcCCCcccceEEecCC
Q psy12833        229 QLVQSIITNPLINGEVIRIDGA  250 (254)
Q Consensus       229 ~~~~~l~~~~~~~G~~i~~~gG  250 (254)
                      +++..++... .+| .+++.+|
T Consensus       191 ~~~~~~~~~~-~~g-~~~~~~~  210 (281)
T d1vl0a_         191 RVVLKVIDEK-NYG-TFHCTCK  210 (281)
T ss_dssp             HHHHHHHHHT-CCE-EEECCCB
T ss_pred             hhhhhhhhhc-ccC-ceeEeCC
Confidence            9999999653 234 5555444

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.48  E-value=2.2e-14  Score=111.01  Aligned_cols=193  Identities=13%  Similarity=0.108  Sum_probs=119.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      -|++|||||||.||++++++|.++|+  +|+...|+....          ...+..+..|..++..      ...+.+|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----------~~~~~~~~~d~~~~~~------~~~~~~d~   65 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----------HPRLDNPVGPLAELLP------QLDGSIDT   65 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----------CTTEECCBSCHHHHGG------GCCSCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----------cccccccccchhhhhh------ccccchhe
Confidence            48999999999999999999999997  666666654221          1123455555443321      22346899


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCcc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA  161 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~  161 (254)
                      +|+|+|....            .....+...++|+.++..+++++..    ..      -.+++++||..+....  ...
T Consensus        66 vi~~~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~a~~----~~------v~~~i~~Ss~~~~~~~--~~~  121 (212)
T d2a35a1          66 AFCCLGTTIK------------EAGSEEAFRAVDFDLPLAVGKRALE----MG------ARHYLVVSALGADAKS--SIF  121 (212)
T ss_dssp             EEECCCCCHH------------HHSSHHHHHHHHTHHHHHHHHHHHH----TT------CCEEEEECCTTCCTTC--SSH
T ss_pred             eeeeeeeecc------------ccccccccccchhhhhhhccccccc----cc------cccccccccccccccc--ccc
Confidence            9999985421            1122345678888888888776533    22      4689999998765443  457


Q ss_pred             chhchHHHHHhHHHHHHHhccCCc-EEEEEecCCccccccccchHHHH-HHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy12833        162 YSASKSGIVGMTLPMARDLAGAGI-RVNTIAPGLFDTPLLSMLNEKVR-NFLARSIPAPQRLGHPDEFAQLVQSIITNPL  239 (254)
Q Consensus       162 Y~~sK~a~~~~~~~la~e~~~~~i-~v~~v~Pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  239 (254)
                      |..+|...+...+       ..+. ++..++|+.+..+.......... .......+.-.+.++++|+|++++.++.++.
T Consensus       122 y~~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         122 YNRVKGELEQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHHHHHHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hhHHHHHHhhhcc-------ccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            9999987665443       2343 57889999987654322111000 0000000000123688999999999987543


Q ss_pred             cccce
Q psy12833        240 INGEV  244 (254)
Q Consensus       240 ~~G~~  244 (254)
                       .|..
T Consensus       195 -~g~~  198 (212)
T d2a35a1         195 -KGVR  198 (212)
T ss_dssp             -SEEE
T ss_pred             -CCCE
Confidence             4443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.43  E-value=1.2e-12  Score=105.58  Aligned_cols=196  Identities=13%  Similarity=0.067  Sum_probs=119.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++|||||+|.||++++++|.++|..|.+ +++...              +.+|++|.+.++++++..     ++|+|||+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~--------------~~~Dl~~~~~~~~~i~~~-----~~D~Vih~   61 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE--------------FCGDFSNPKGVAETVRKL-----RPDVIVNA   61 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS--------------SCCCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc--------------ccCcCCCHHHHHHHHHHc-----CCCEEEEe
Confidence            5999999999999999999998865544 444321              457999999999988876     79999999


Q ss_pred             CccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC----------
Q psy12833         86 AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG----------  155 (254)
Q Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~----------  155 (254)
                      ||......          ..+.....+..|+.+...+..+...    .       ..+++++||.....+          
T Consensus        62 Aa~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~----~-------~~~~~~~ss~~~~~~~~~~~~~E~~  120 (298)
T d1n2sa_          62 AAHTAVDK----------AESEPELAQLLNATSVEAIAKAANE----T-------GAWVVHYSTDYVFPGTGDIPWQETD  120 (298)
T ss_dssp             CCCCCHHH----------HTTCHHHHHHHHTHHHHHHHHHHTT----T-------TCEEEEEEEGGGSCCCTTCCBCTTS
T ss_pred             cccccccc----------cccCccccccccccccccchhhhhc----c-------ccccccccccccccCCCCCCCcccc
Confidence            99653321          1233356678888888877666532    2       356778887765432          


Q ss_pred             -CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCc-cccccccchHHHHHHHHhcCC------CCCCCCCHHHH
Q psy12833        156 -QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF-DTPLLSMLNEKVRNFLARSIP------APQRLGHPDEF  227 (254)
Q Consensus       156 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~-~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v  227 (254)
                       ..+...|+.+|.+.+.+.+..    ....   ..+.++.. ..+.. .....+........+      ......+.+|+
T Consensus       121 ~~~p~~~y~~~k~~~e~~~~~~----~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  192 (298)
T d1n2sa_         121 ATSPLNVYGKTKLAGEKALQDN----CPKH---LIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVINDQYGAPTGAELL  192 (298)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHH----CSSE---EEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEECSCEECCEEHHHH
T ss_pred             ccCCCchHhhhhhhhhhhHHhh----hccc---ccccccceeeccCC-ccchhhhhhhcccceeecccceeecccccchH
Confidence             124568999998877665432    2211   12222211 11111 111112222222111      00334577888


Q ss_pred             HHHHHHHhc---CCCcccceEEecCC
Q psy12833        228 AQLVQSIIT---NPLINGEVIRIDGA  250 (254)
Q Consensus       228 a~~~~~l~~---~~~~~G~~i~~~gG  250 (254)
                      ++.+..++.   ...-.++++++.++
T Consensus       193 ~~~~~~~i~~~~~~~~~~~~~n~~~~  218 (298)
T d1n2sa_         193 ADCTAHAIRVALNKPEVAGLYHLVAG  218 (298)
T ss_dssp             HHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             HHHHHHHHhhhhccccccccccccCC
Confidence            888877763   23345677777554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.34  E-value=1.2e-12  Score=106.26  Aligned_cols=205  Identities=10%  Similarity=0.030  Sum_probs=118.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH-----HHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE-----SVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++||||||||.||++++++|.++|++|+++.|+.....     ........++.++++|+.|.+++.+.+.       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            46999999999999999999999999999999755321     1111225679999999999998887776       67


Q ss_pred             cEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC-C
Q psy12833         80 DVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-G  158 (254)
Q Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~-~  158 (254)
                      +.++++++.....                     .|..+...++.++    .+..      ..++++.||.......+ .
T Consensus        77 ~~~~~~~~~~~~~---------------------~~~~~~~~~l~~a----~~~~------~~~~v~~Ss~g~~~~~~~~  125 (312)
T d1qyda_          77 DVVISALAGGVLS---------------------HHILEQLKLVEAI----KEAG------NIKRFLPSEFGMDPDIMEH  125 (312)
T ss_dssp             SEEEECCCCSSSS---------------------TTTTTHHHHHHHH----HHSC------CCSEEECSCCSSCTTSCCC
T ss_pred             chhhhhhhhcccc---------------------cchhhhhHHHHHH----HHhc------CCcEEEEeeccccCCCccc
Confidence            8888888643211                     1111222222222    2222      34566666654333221 1


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHH--HHhcCC------CCCCCCCHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNF--LARSIP------APQRLGHPDEFAQL  230 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~va~~  230 (254)
                      ...|...+.........+   ....++.+..++|+.+..+............  ..+...      ....+++++|+|++
T Consensus       126 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  202 (312)
T d1qyda_         126 ALQPGSITFIDKRKVRRA---IEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTY  202 (312)
T ss_dssp             CCSSTTHHHHHHHHHHHH---HHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHH
T ss_pred             ccchhhhhhHHHHHHHHh---hcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHH
Confidence            122333333333333322   2245778888888887554321110000000  000010      01346799999999


Q ss_pred             HHHHhcCCCcccceE-EecCC
Q psy12833        231 VQSIITNPLINGEVI-RIDGA  250 (254)
Q Consensus       231 ~~~l~~~~~~~G~~i-~~~gG  250 (254)
                      ++.++.++...|+.+ .+.++
T Consensus       203 ~~~~l~~~~~~~~~~~~~~~~  223 (312)
T d1qyda_         203 TIKSIDDPQTLNKTMYIRPPM  223 (312)
T ss_dssp             HHHHTTCGGGSSSEEECCCGG
T ss_pred             HHHHhcCccccCceEEEeCCC
Confidence            999997765555554 44444

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.29  E-value=7.6e-12  Score=100.80  Aligned_cols=201  Identities=11%  Similarity=0.056  Sum_probs=118.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHH------HHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESV------AKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      |++|||||||.||++++++|.++|++|++++|+.......      .......+.++.+|+.+..+..+.++       .
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~   76 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------N   76 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------h
Confidence            7899999999999999999999999999999976543221      11125678999999999998887776       6


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCC
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG  158 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~  158 (254)
                      .+.++++++.....                         +...+.++..    ...      ...+++.||.........
T Consensus        77 ~~~vi~~~~~~~~~-------------------------~~~~~~~a~~----~~~------~~~~~~~s~~~~~~~~~~  121 (307)
T d1qyca_          77 VDVVISTVGSLQIE-------------------------SQVNIIKAIK----EVG------TVKRFFPSEFGNDVDNVH  121 (307)
T ss_dssp             CSEEEECCCGGGSG-------------------------GGHHHHHHHH----HHC------CCSEEECSCCSSCTTSCC
T ss_pred             ceeeeecccccccc-------------------------hhhHHHHHHH----Hhc------cccceeeecccccccccc
Confidence            78899987643110                         1111222222    222      245666666544333333


Q ss_pred             CccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHHHHHH--------HHhcCCCCCCCCCHHHHHHH
Q psy12833        159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNF--------LARSIPAPQRLGHPDEFAQL  230 (254)
Q Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~va~~  230 (254)
                      ...+...+...........   ...++.+..++|+.+..+............        +...... ..+++++|+|++
T Consensus       122 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~~  197 (307)
T d1qyca_         122 AVEPAKSVFEVKAKVRRAI---EAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNAR-VVFVKEEDIGTF  197 (307)
T ss_dssp             CCTTHHHHHHHHHHHHHHH---HHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCE-EEEECHHHHHHH
T ss_pred             ccccccccccccccccchh---hccCCCceecccceecCCCccchhhhhhhhhhcccceeeeccccc-ccCCcHHHHHHH
Confidence            3333333333322222222   234778888999888665332211000000        0000001 346799999999


Q ss_pred             HHHHhcCCCcccceEE-ecCCc
Q psy12833        231 VQSIITNPLINGEVIR-IDGAL  251 (254)
Q Consensus       231 ~~~l~~~~~~~G~~i~-~~gG~  251 (254)
                      ++.++..+.-.|+.+. +.+|.
T Consensus       198 ~~~~l~~~~~~~~~~~~~~~~~  219 (307)
T d1qyca_         198 TIKAVDDPRTLNKTLYLRLPAN  219 (307)
T ss_dssp             HHTTSSCGGGTTEEEECCCGGG
T ss_pred             HHHHhcChhhcCceeEEeCCCC
Confidence            9999976544444444 34443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=2.9e-10  Score=91.55  Aligned_cols=209  Identities=14%  Similarity=0.104  Sum_probs=119.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHH--HcCCCcEEE
Q psy12833          7 GLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKD--SFGKLDVNV   83 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--~~~~id~li   83 (254)
                      ||||||+|.||++++++|+++|+ .|+.+++-....+ ......    ...+|..+.+   .+......  .+..+++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~   73 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVD----LNIADYMDKE---DFLIQIMAGEEFGDVEAIF   73 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHHHHT----SCCSEEEEHH---HHHHHHHTTCCCSSCCEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hhcccc----cchhhhccch---HHHHHHhhhhcccchhhhh
Confidence            89999999999999999999997 5777764222211 111111    1222333333   23333333  235688899


Q ss_pred             eCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccC--------
Q psy12833         84 NCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--------  155 (254)
Q Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~--------  155 (254)
                      |.|+.....            ....+...+.|+.+...+.++....    .       -++++.||.....+        
T Consensus        74 ~~aa~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~----~-------i~~v~~ss~~~~~~~~~~~~~~  130 (307)
T d1eq2a_          74 HEGACSSTT------------EWDGKYMMDNNYQYSKELLHYCLER----E-------IPFLYASSAATYGGRTSDFIES  130 (307)
T ss_dssp             ECCSCCCTT------------CCCHHHHHHHTHHHHHHHHHHHHHH----T-------CCEEEEEEGGGGTTCCSCBCSS
T ss_pred             hhccccccc------------ccccccccccccccccccccccccc----c-------cccccccccccccccccccccc
Confidence            988754321            1223445566677766665544432    2       23555555444322        


Q ss_pred             ---CCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccccc------ccchHHHHHHHHhcC-C--------C
Q psy12833        156 ---QSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLL------SMLNEKVRNFLARSI-P--------A  217 (254)
Q Consensus       156 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~------~~~~~~~~~~~~~~~-~--------~  217 (254)
                         .++...|+.+|.+.+.+.+.+...   .++.+..++|..+..|..      ..........+.... +        .
T Consensus       131 ~~~~~~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  207 (307)
T d1eq2a_         131 REYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENF  207 (307)
T ss_dssp             GGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------
T ss_pred             ccccccccccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccce
Confidence               235678999999999988877654   467777777766655422      122222222221110 0        1


Q ss_pred             CCCCCCHHHHHHHHHHHhcCCCcccceEEecCCc
Q psy12833        218 PQRLGHPDEFAQLVQSIITNPLINGEVIRIDGAL  251 (254)
Q Consensus       218 ~~~~~~~~~va~~~~~l~~~~~~~G~~i~~~gG~  251 (254)
                      ...+.+++|++.++..++..+.  ...+++..|.
T Consensus       208 ~r~~~~v~d~~~~~~~~~~~~~--~~~~~~~~~~  239 (307)
T d1eq2a_         208 KRDFVYVGDVADVNLWFLENGV--SGIFNLGTGR  239 (307)
T ss_dssp             CBCEEEHHHHHHHHHHHHHHCC--CEEEEESCSC
T ss_pred             eeeeeecccHHHHHHHHhhhcc--cccccccccc
Confidence            1356789999999998886442  2456665554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.15  E-value=6.7e-10  Score=91.69  Aligned_cols=201  Identities=10%  Similarity=0.012  Sum_probs=118.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHH-HHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEED-VQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~-~~~~~~~~~~~~~~id~   81 (254)
                      +.|+++||||||.||++++++|.++|++|+++.|+.+......-....++..+++|+.|..+ ++.++       ...|.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~-------~~~~~   74 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLF-------EGAHL   74 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHH-------TTCSE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHh-------cCCce
Confidence            46899999999999999999999999999999998776543322234578999999998654 33333       36787


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCC--CC
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS--GQ  159 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~--~~  159 (254)
                      ++.+.....            ..          ++....+++.++.    +..      ..++++.||.....+.+  ..
T Consensus        75 ~~~~~~~~~------------~~----------~~~~~~~~~~aa~----~ag------v~~~v~~Ss~~~~~~~~~~~~  122 (350)
T d1xgka_          75 AFINTTSQA------------GD----------EIAIGKDLADAAK----RAG------TIQHYIYSSMPDHSLYGPWPA  122 (350)
T ss_dssp             EEECCCSTT------------SC----------HHHHHHHHHHHHH----HHS------CCSEEEEEECCCGGGTSSCCC
T ss_pred             EEeeccccc------------ch----------hhhhhhHHHHHHH----HhC------CCceEEEeeccccccCCcccc
Confidence            776643211            01          1112222333332    222      34677777766544332  23


Q ss_pred             ccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCccccccccchHH-----HHH-HHHhcCCCCC----CCCC-HHHHH
Q psy12833        160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-----VRN-FLARSIPAPQ----RLGH-PDEFA  228 (254)
Q Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~~~~~~~~~-----~~~-~~~~~~~~~~----~~~~-~~~va  228 (254)
                      ..|..+|...+.+.+       ..++....++|+.+..+........     ... ...-..+..+    .+++ .+|++
T Consensus       123 ~~~~~~k~~~~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva  195 (350)
T d1xgka_         123 VPMWAPKFTVENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVG  195 (350)
T ss_dssp             CTTTHHHHHHHHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHH
T ss_pred             hhhhhhHHHHHHHHH-------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHH
Confidence            456667765544433       2457788888887755432111000     000 0000011101    1233 47899


Q ss_pred             HHHHHHhcC--CCcccceEEecC
Q psy12833        229 QLVQSIITN--PLINGEVIRIDG  249 (254)
Q Consensus       229 ~~~~~l~~~--~~~~G~~i~~~g  249 (254)
                      ..+..++.+  +...|+.+.+.|
T Consensus       196 ~~v~~~l~~~~~~~~G~~~~~~g  218 (350)
T d1xgka_         196 PALLQIFKDGPQKWNGHRIALTF  218 (350)
T ss_dssp             HHHHHHHHHCHHHHTTCEEEECS
T ss_pred             HHHHHHHhCChhhcCCeEEEEeC
Confidence            999888853  345788888865

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.14  E-value=4.6e-15  Score=113.45  Aligned_cols=167  Identities=16%  Similarity=0.135  Sum_probs=92.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC---CCc--------------eEEecCCCCHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG---PDV--------------KFAPVDVTSEEDVQKA   68 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~--------------~~~~~Dls~~~~~~~~   68 (254)
                      ++.|+||+|++|+++|+.|++.|++|++.+|++++++++.+++.   ...              ...............+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            46788888999999999999999999999999999888877661   111              1222222222222222


Q ss_pred             HHHHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEe
Q psy12833         69 VLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA  148 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vs  148 (254)
                      ....... ..................                   .+..+...+.+.....+....      ....+++.
T Consensus        82 ~~~~~~~-~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  135 (212)
T d1jaya_          82 RDLKNIL-REKIVVSPLVPVSRGAKG-------------------FTYSSERSAAEIVAEVLESEK------VVSALHTI  135 (212)
T ss_dssp             HHTHHHH-TTSEEEECCCCEECCTTC-------------------CEECCSSCHHHHHHHHHTCSC------EEECCTTC
T ss_pred             HHhhhhh-cccccccccccccccccc-------------------ccccccchhhhhhhhhhhhhc------ccccceee
Confidence            2222111 111111111111100000                   000011111222233333322      23333333


Q ss_pred             ccccccCCCCCccchhchHHHHHhHHHHHHHhccCCcEEEEEecCCcccc
Q psy12833        149 SIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP  198 (254)
Q Consensus       149 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~~~t~  198 (254)
                      |.....+.+....|...+++....++..+.++....+.++.++||.+++.
T Consensus       136 ~~~~~~~~~~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a  185 (212)
T d1jaya_         136 PAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNS  185 (212)
T ss_dssp             CHHHHHCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGH
T ss_pred             cHHHhcCcccccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHH
Confidence            44444444455678888888888888888888777888899999998764

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.39  E-value=1.1e-06  Score=63.59  Aligned_cols=73  Identities=21%  Similarity=0.342  Sum_probs=57.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      ++++++||.|+ |++|+.+++.|.++|+ +++++.|+.++.+++.++++..  +..     .+++.+.+.       ..|
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~--~~~-----~~~~~~~l~-------~~D   86 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE--AVR-----FDELVDHLA-------RSD   86 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE--ECC-----GGGHHHHHH-------TCS
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc--ccc-----chhHHHHhc-------cCC
Confidence            57899999998 9999999999999998 6999999999999998887532  222     233333333       789


Q ss_pred             EEEeCCccC
Q psy12833         81 VNVNCAGIS   89 (254)
Q Consensus        81 ~li~~ag~~   89 (254)
                      ++|++.+..
T Consensus        87 ivi~atss~   95 (159)
T d1gpja2          87 VVVSATAAP   95 (159)
T ss_dssp             EEEECCSSS
T ss_pred             EEEEecCCC
Confidence            999998753

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.29  E-value=3.7e-06  Score=62.29  Aligned_cols=80  Identities=16%  Similarity=0.196  Sum_probs=62.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHH---Hh--CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAK---EL--GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~---~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +++|+|+|.|+ ||.|++++..|.+.|. +++++.|+.+..+++..   ++  ........+|+.+.+++...+.     
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   89 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-----   89 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-----
Confidence            47899999999 7999999999999998 78899999887665443   33  2334456788999887776665     


Q ss_pred             cCCCcEEEeCCccC
Q psy12833         76 FGKLDVNVNCAGIS   89 (254)
Q Consensus        76 ~~~id~li~~ag~~   89 (254)
                        ..|++||+....
T Consensus        90 --~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 --SADILTNGTKVG  101 (182)
T ss_dssp             --TCSEEEECSSTT
T ss_pred             --ccceeccccCCc
Confidence              789999997653

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.28  E-value=1.8e-06  Score=63.39  Aligned_cols=75  Identities=13%  Similarity=0.170  Sum_probs=58.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      ++|+++|.|| |.+|+.+|+.|+++|++|++++|+.++++++.+++.. ......+..+.......+.       ..|.+
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~-~~~~~~~~~~~~~~~~~i~-------~~~~~   71 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQH-STPISLDVNDDAALDAEVA-------KHDLV   71 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTT-EEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccc-cccccccccchhhhHhhhh-------cccee
Confidence            4689999988 9999999999999999999999999999998876533 3444556666666655554       56777


Q ss_pred             EeCC
Q psy12833         83 VNCA   86 (254)
Q Consensus        83 i~~a   86 (254)
                      +...
T Consensus        72 i~~~   75 (182)
T d1e5qa1          72 ISLI   75 (182)
T ss_dssp             EECS
T ss_pred             Eeec
Confidence            7554

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.22  E-value=2.2e-06  Score=63.47  Aligned_cols=79  Identities=22%  Similarity=0.199  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.++||+||++++|.+.++.....|++|+.+++++++.+.+ .+++....+..-|-...   +...+...  ..++|++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~-~~~Ga~~vi~~~~~~~~---~~~~~~~~--~~Gvd~v  102 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAFNYKTVNSL---EEALKKAS--PDGYDCY  102 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTSCSCH---HHHHHHHC--TTCEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH-HhhhhhhhcccccccHH---HHHHHHhh--cCCCcee
Confidence            588999999999999999998889999999999987765554 44444333333333322   22222221  1369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       103 ~D~vG  107 (182)
T d1v3va2         103 FDNVG  107 (182)
T ss_dssp             EESSC
T ss_pred             EEecC
Confidence            99987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.7e-06  Score=63.56  Aligned_cols=77  Identities=14%  Similarity=0.123  Sum_probs=55.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      +|.++||+||+|++|...++.....|++|+.+++++++.+. ..+++..- .  .|.++.+    +.+++.+..  .++|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~-~~~~Ga~~-v--i~~~~~~----~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQNGAHE-V--FNHREVN----YIDKIKKYVGEKGID   99 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSE-E--EETTSTT----HHHHHHHHHCTTCEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccc-ccccCccc-c--ccccccc----HHHHhhhhhccCCce
Confidence            58899999999999999999888889999999987665544 45565432 1  3555554    333444332  2589


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9998876

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=6e-06  Score=60.38  Aligned_cols=75  Identities=15%  Similarity=0.195  Sum_probs=56.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||+++|.|+ ||.+++++..|.+.|.+|+++.|+.++.+++.+.+.........+..+.            ...+.|+
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~------------~~~~~dl   82 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL------------EGHEFDL   82 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG------------TTCCCSE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc------------cccccce
Confidence            46899999998 8999999999999999999999999999988887643322333333221            1136899


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +||+....
T Consensus        83 iIN~Tp~G   90 (170)
T d1nyta1          83 IINATSSG   90 (170)
T ss_dssp             EEECCSCG
T ss_pred             eecccccC
Confidence            99997554

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.05  E-value=2e-05  Score=57.30  Aligned_cols=82  Identities=27%  Similarity=0.354  Sum_probs=57.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcC-CCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFG-KLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-~id~   81 (254)
                      .|.+++|+| +|++|...++.+...|++|+++++++++++.. ++++....+ ..|- ..++.....+.+.+..+ .+|+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a-~~~ga~~~~-~~~~-~~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNCGADVTL-VVDP-AKEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEEE-ECCT-TTSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHH-HHcCCcEEE-eccc-cccccchhhhhhhcccccCCce
Confidence            478999997 58999999998888999999999998887655 445443332 2222 12233445556665554 6999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.++|.
T Consensus       102 vid~~g~  108 (170)
T d1e3ja2         102 TIDCSGN  108 (170)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999873

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.02  E-value=4.4e-06  Score=61.74  Aligned_cols=77  Identities=21%  Similarity=0.160  Sum_probs=55.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      +|.++||+||++++|...++.+...|++|+++.++.++.+. .++.+... .  .|-.+++    +.+++.+..  .++|
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~-l~~~Ga~~-v--i~~~~~~----~~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-LSRLGVEY-V--GDSRSVD----FADEILELTDGYGVD   96 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHTTCCSE-E--EETTCST----HHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc-cccccccc-c--ccCCccC----HHHHHHHHhCCCCEE
Confidence            47899999999999999999888889999999988766544 44554432 2  2444443    334444433  3699


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      +++.++|
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999887

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.02  E-value=1.1e-05  Score=56.35  Aligned_cols=71  Identities=17%  Similarity=0.263  Sum_probs=58.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +++|.|+ |.+|+.+++.|.++|+.|++++++++..+++.+++  .+.++..|.+|++.++++      .....|.++..
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~--~~~vi~Gd~~~~~~l~~~------~i~~a~~vv~~   72 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDA------GIEDADMYIAV   72 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHT------TTTTCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh--hhhhccCcccchhhhhhc------Chhhhhhhccc
Confidence            6899998 99999999999999999999999999888877664  467899999999866555      11367887764

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=5.5e-06  Score=60.98  Aligned_cols=77  Identities=17%  Similarity=0.127  Sum_probs=56.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id   80 (254)
                      .|+++||+||++++|...++.....|++|+.+++++++.+.+ .+++...   .+|.++++-    .+++.+..  ..+|
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~-~~lGa~~---vi~~~~~d~----~~~v~~~t~g~g~d   99 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA-LKAGAWQ---VINYREEDL----VERLKEITGGKKVR   99 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSE---EEETTTSCH----HHHHHHHTTTCCEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHH-HhcCCeE---EEECCCCCH----HHHHHHHhCCCCeE
Confidence            588999999999999999998888899999999998887665 4555432   235555443    33333332  3689


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (179)
T d1qora2         100 VVYDSVG  106 (179)
T ss_dssp             EEEECSC
T ss_pred             EEEeCcc
Confidence            9998876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.98  E-value=1.2e-05  Score=59.28  Aligned_cols=80  Identities=20%  Similarity=0.147  Sum_probs=55.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      +|.++||+|+ |++|...++.+...|+ +|+++++++++.+.. ++++... .+...-.+..+.   .+.+.+..  .++
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-vi~~~~~~~~~~---~~~i~~~~~~~g~  101 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGADL-TLNRRETSVEER---RKAIMDITHGRGA  101 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCSE-EEETTTSCHHHH---HHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccccceE-EEeccccchHHH---HHHHHHhhCCCCc
Confidence            5899999997 8999999998888998 799999988877644 5665433 232222233333   33333332  258


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|.++|.
T Consensus       102 Dvvid~vG~  110 (182)
T d1vj0a2         102 DFILEATGD  110 (182)
T ss_dssp             EEEEECSSC
T ss_pred             eEEeecCCc
Confidence            999999874

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=8.5e-06  Score=51.03  Aligned_cols=42  Identities=26%  Similarity=0.283  Sum_probs=36.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESV   44 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~   44 (254)
                      ++.++||+||++|+|...++.+...|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            467899999999999999998888899999999988776554

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.88  E-value=1.5e-05  Score=58.22  Aligned_cols=73  Identities=16%  Similarity=0.276  Sum_probs=56.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCC--ceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPD--VKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      .+||+++|.|+ ||.+++++..|.+.+.+|+++.|+.++++.+.+.++..  +.....|-.              .....
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~--------------~~~~~   80 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI--------------PLQTY   80 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC--------------CCSCC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc--------------ccccc
Confidence            47899999988 88899999999998889999999999999988877433  333333311              12478


Q ss_pred             cEEEeCCccC
Q psy12833         80 DVNVNCAGIS   89 (254)
Q Consensus        80 d~li~~ag~~   89 (254)
                      |++||+....
T Consensus        81 diiIN~tp~g   90 (171)
T d1p77a1          81 DLVINATSAG   90 (171)
T ss_dssp             SEEEECCCC-
T ss_pred             ceeeeccccc
Confidence            9999997654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.83  E-value=5.4e-05  Score=55.12  Aligned_cols=75  Identities=24%  Similarity=0.224  Sum_probs=53.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      -+|+++||+||+|++|...++.+...|++|+.+++++++.+.. .+++....+   |..+.      .++.. ...++|+
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~-~~lGa~~~i---~~~~~------~~~~~-~~~g~D~   94 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEEAA---TYAEV------PERAK-AWGGLDL   94 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSEEE---EGGGH------HHHHH-HTTSEEE
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccc-cccccceee---ehhhh------hhhhh-ccccccc
Confidence            3688999999999999999998888899999999987766654 455543222   33221      12222 2347999


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|.+.|
T Consensus        95 v~d~~G  100 (171)
T d1iz0a2          95 VLEVRG  100 (171)
T ss_dssp             EEECSC
T ss_pred             cccccc
Confidence            998766

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=6.5e-05  Score=57.08  Aligned_cols=80  Identities=26%  Similarity=0.308  Sum_probs=55.6

Q ss_pred             CCCcEEEEeCCC----------------ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHH
Q psy12833          2 LKGVVGLVTGGA----------------SGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         2 l~~~~~lItGas----------------~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~   65 (254)
                      |+|+++|||+|.                |.+|.+||+++.++|++|+++.......      ....+..+..  .+.+++
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~------~p~~~~~~~~--~t~~~m   75 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP------TPPFVKRVDV--MTALEM   75 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC------CCTTEEEEEC--CSHHHH
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC------ccccccccee--hhhHHH
Confidence            689999999875                8999999999999999999876643321      1123344443  344554


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCccCCCc
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAGISCAF   92 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~   92 (254)
                      .+.+.   +.+...|++|++|+++...
T Consensus        76 ~~~~~---~~~~~~D~~i~aAAvsDf~   99 (223)
T d1u7za_          76 EAAVN---ASVQQQNIFIGCAAVADYR   99 (223)
T ss_dssp             HHHHH---HHGGGCSEEEECCBCCSEE
T ss_pred             HHHHH---hhhccceeEeeeechhhhh
Confidence            44444   3444689999999986543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.77  E-value=9.3e-06  Score=59.62  Aligned_cols=78  Identities=18%  Similarity=0.178  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.++||+||+||+|.+.++-....|++|+.+++++++.+.. ++++.....   |-++..  .+.....  ..+++|++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~-~~lGa~~vi---~~~~~~--~~~~~~~--~~~gvD~v  102 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKEVL---AREDVM--AERIRPL--DKQRWAAA  102 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSEEE---ECC-----------C--CSCCEEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH-Hhcccceee---ecchhH--HHHHHHh--hccCcCEE
Confidence            468899999999999999998888999999999988876655 455544322   222211  1111111  12479999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      +.+.|.
T Consensus       103 id~vgg  108 (176)
T d1xa0a2         103 VDPVGG  108 (176)
T ss_dssp             EECSTT
T ss_pred             EEcCCc
Confidence            999873

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.77  E-value=0.00014  Score=51.34  Aligned_cols=113  Identities=15%  Similarity=0.174  Sum_probs=67.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |-+++++.|.|+ |.+|..++..|+.+|  .+|++++++++.++-...++      .........|..            
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~------------   68 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS------------   68 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG------------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH------------
Confidence            566789999996 999999999999988  48999999886554333222      223334444431            


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                        ....-|++|.++|.....            .++-.+.+..|.    .+.+...+.+.+..+     .+.++++|-
T Consensus        69 --~~~~adivvitag~~~~~------------g~~r~~l~~~N~----~i~~~~~~~i~~~~p-----~aivivvtN  122 (146)
T d1ez4a1          69 --DCKDADLVVITAGAPQKP------------GESRLDLVNKNL----NILSSIVKPVVDSGF-----DGIFLVAAN  122 (146)
T ss_dssp             --GGTTCSEEEECCCC----------------------CHHHHH----HHHHHHHHHHHHTTC-----CSEEEECSS
T ss_pred             --HhccccEEEEecccccCC------------CCCHHHHHHHHH----HHHHHHHHHHhhcCC-----CcEEEEeCC
Confidence              223679999999864321            122233344444    445555565655541     456666553

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.72  E-value=4e-05  Score=56.81  Aligned_cols=84  Identities=19%  Similarity=0.211  Sum_probs=53.2

Q ss_pred             CCcEEEE-eCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH---HHhCCCceEEecCCCCHHHHHHHHHHHHHH-cC
Q psy12833          3 KGVVGLV-TGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGPDVKFAPVDVTSEEDVQKAVLLCKDS-FG   77 (254)
Q Consensus         3 ~~~~~lI-tGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~~   77 (254)
                      +|.+++| +||+|++|.+.++-....|++|+.+.|+.+..++..   .+++....+. -|-.+..+..+.+.++.+. .+
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhccC
Confidence            4555566 799999999999877778999999988877665544   3445433222 1111112233444444443 34


Q ss_pred             CCcEEEeCCc
Q psy12833         78 KLDVNVNCAG   87 (254)
Q Consensus        78 ~id~li~~ag   87 (254)
                      ++|+++.+.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999998876

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=3.3e-05  Score=57.18  Aligned_cols=78  Identities=21%  Similarity=0.143  Sum_probs=52.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +++|||+||+||+|...++-....|++ |+.+++++++..++..+++....+   |..+++ ..+.++++..  .++|++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi---~~~~~~-~~~~~~~~~~--~GvDvv  104 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAV---NYKTGN-VAEQLREACP--GGVDVY  104 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEE---ETTSSC-HHHHHHHHCT--TCEEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEe---eccchh-HHHHHHHHhc--cCceEE
Confidence            379999999999999999977778986 445677777777777777654322   333322 2333333322  369999


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      +.+.|
T Consensus       105 ~D~vG  109 (187)
T d1vj1a2         105 FDNVG  109 (187)
T ss_dssp             EESSC
T ss_pred             EecCC
Confidence            99876

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.68  E-value=2.8e-05  Score=54.15  Aligned_cols=73  Identities=16%  Similarity=0.189  Sum_probs=55.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |+++|.|+ |-+|+.+++.|.++|++|++++.+++..+++.+   .....+.+|.++++.++++    .  ..+.|.+|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~---~~~~~~~gd~~~~~~l~~a----~--i~~a~~vi~   70 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSL----G--IRNFEYVIV   70 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT---TCSEEEECCTTCTTHHHHH----T--GGGCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH---hCCcceeeecccchhhhcc----C--CccccEEEE
Confidence            56788877 899999999999999999999999888777643   2355678899998866554    1  125687776


Q ss_pred             CCc
Q psy12833         85 CAG   87 (254)
Q Consensus        85 ~ag   87 (254)
                      ..+
T Consensus        71 ~~~   73 (134)
T d2hmva1          71 AIG   73 (134)
T ss_dssp             CCC
T ss_pred             EcC
Confidence            543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=0.00025  Score=51.35  Aligned_cols=80  Identities=26%  Similarity=0.427  Sum_probs=57.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id   80 (254)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.. ++++... ++..+-.+..+..+.++   ... .++|
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~Ga~~-~~~~~~~~~~~~~~~~~---~~~g~g~D   99 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGADL-VLQISKESPQEIARKVE---GQLGCKPE   99 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCSE-EEECSSCCHHHHHHHHH---HHHTSCCS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhCCcc-ccccccccccccccccc---ccCCCCce
Confidence            5789999987 9999999998889999 799999998877754 5665433 33333344544444433   333 3799


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|.++|.
T Consensus       100 vvid~~G~  107 (171)
T d1pl8a2         100 VTIECTGA  107 (171)
T ss_dssp             EEEECSCC
T ss_pred             EEEeccCC
Confidence            99999883

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.57  E-value=6.5e-05  Score=54.48  Aligned_cols=68  Identities=22%  Similarity=0.303  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++|+++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.++.  ..+.. ..               ....|+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~--~~~~~-~~---------------~~~~Dl   76 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY--AYINS-LE---------------NQQADI   76 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC--EEESC-CT---------------TCCCSE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhh--hhhhc-cc---------------ccchhh
Confidence            5789999998 9999999999999997 799999999998888776642  22211 11               125799


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +||+....
T Consensus        77 iINaTpiG   84 (167)
T d1npya1          77 LVNVTSIG   84 (167)
T ss_dssp             EEECSSTT
T ss_pred             heeccccC
Confidence            99987643

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.53  E-value=0.00035  Score=50.43  Aligned_cols=76  Identities=18%  Similarity=0.213  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.+++|.|+ |++|...++.+...|++|+++++++++++.. ++++....+-.-+-.+      ..   .+..+.+|++
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~lGa~~~i~~~~~~~------~~---~~~~~~~d~v   95 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMGADHYIATLEEGD------WG---EKYFDTFDLI   95 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSEEEEGGGTSC------HH---HHSCSCEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hccCCcEEeeccchHH------HH---HhhhcccceE
Confidence            5789999997 8999998887778899999999998877654 5566443222222221      11   1223478999


Q ss_pred             EeCCccC
Q psy12833         83 VNCAGIS   89 (254)
Q Consensus        83 i~~ag~~   89 (254)
                      +.+.+..
T Consensus        96 i~~~~~~  102 (168)
T d1piwa2          96 VVCASSL  102 (168)
T ss_dssp             EECCSCS
T ss_pred             EEEecCC
Confidence            9987754

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.48  E-value=0.00035  Score=50.88  Aligned_cols=80  Identities=20%  Similarity=0.265  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +|.+++|.|+ ||+|...++.+...|+ +|+++++++++++. ..+++....+-.-|-.+.  .+...+..  ...++|+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~-Ak~~GA~~~in~~~~~~~--~~~~~~~~--~g~G~d~  102 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEK-AMAVGATECISPKDSTKP--ISEVLSEM--TGNNVGY  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHHTCSEEECGGGCSSC--HHHHHHHH--HTSCCCE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHH-HHhcCCcEEECccccchH--HHHHHHHh--ccccceE
Confidence            5789999987 9999999999999995 89999999888774 456655433322232221  12222211  1237999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.+.|.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9999873

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.0002  Score=51.68  Aligned_cols=74  Identities=24%  Similarity=0.313  Sum_probs=53.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      .|.+|+|.|+ |++|...++.+...|+++++++++.++.+ ..++++....   .|..+.+...       ....++|++
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~lGad~~---i~~~~~~~~~-------~~~~~~D~v   97 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGADEV---VNSRNADEMA-------AHLKSFDFI   97 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCSEE---EETTCHHHHH-------TTTTCEEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhccCCcEE---EECchhhHHH-------HhcCCCcee
Confidence            5789999986 89999998887788999999999887754 4466664322   3555554322       222479999


Q ss_pred             EeCCcc
Q psy12833         83 VNCAGI   88 (254)
Q Consensus        83 i~~ag~   88 (254)
                      |.++|.
T Consensus        98 id~~g~  103 (168)
T d1uufa2          98 LNTVAA  103 (168)
T ss_dssp             EECCSS
T ss_pred             eeeeec
Confidence            999874

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.47  E-value=0.00018  Score=52.40  Aligned_cols=77  Identities=18%  Similarity=0.261  Sum_probs=50.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEE-EeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc-CCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVV-LCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF-GKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id   80 (254)
                      .|.+++|.|+ |++|...++.+...|++++ ++++++.+++. .++++.. +++  |..+.+    ..+++.+.. +++|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-a~~~Ga~-~~i--~~~~~~----~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL-AKQLGAT-HVI--NSKTQD----PVAAIKEITDGGVN   98 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHHHTCS-EEE--ETTTSC----HHHHHHHHTTSCEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHH-HHHcCCe-EEE--eCCCcC----HHHHHHHHcCCCCc
Confidence            5789999998 8999999988888898654 55666655554 4566542 233  333322    233333332 4799


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|.|+|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999883

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.45  E-value=0.00014  Score=52.71  Aligned_cols=78  Identities=18%  Similarity=0.224  Sum_probs=54.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      .|.+++|.|+++++|...++.+...|+ +|+++++++++.+.. ++++.. +.+.  .++.+.    .+++.+..  +.+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~-~~~Ga~-~~i~--~~~~~~----~~~~~~~~~~~~~   98 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGAD-YVIN--ASMQDP----LAEIRRITESKGV   98 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCS-EEEE--TTTSCH----HHHHHHHTTTSCE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHH-HHcCCc-eeec--cCCcCH----HHHHHHHhhcccc
Confidence            478999999999999999998888885 888889887765554 445543 2333  333332    33333332  358


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|.++|.
T Consensus        99 d~vid~~g~  107 (170)
T d1jvba2          99 DAVIDLNNS  107 (170)
T ss_dssp             EEEEESCCC
T ss_pred             hhhhccccc
Confidence            999999874

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.45  E-value=0.00023  Score=51.80  Aligned_cols=80  Identities=21%  Similarity=0.334  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+.. .+++....+...|-.  +.+.+..+....  +++|+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a-~~~Ga~~~i~~~~~~--~~~~~~~~~~~~--~G~D~  101 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGATECVNPQDYK--KPIQEVLTEMSN--GGVDF  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSEEECGGGCS--SCHHHHHHHHTT--SCBSE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH-HHhCCeeEEecCCch--hHHHHHHHHHhc--CCCCE
Confidence            5789999999 7899999999999985 888889888876644 455433222222221  223333333322  47999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|-+.|.
T Consensus       102 vid~~G~  108 (176)
T d2jhfa2         102 SFEVIGR  108 (176)
T ss_dssp             EEECSCC
T ss_pred             EEecCCc
Confidence            9999874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.44  E-value=0.001  Score=44.54  Aligned_cols=82  Identities=15%  Similarity=0.112  Sum_probs=52.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch-hHHHHHHh-------------CCCceEEecCCCCHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE-GESVAKEL-------------GPDVKFAPVDVTSEEDVQK   67 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~-------------~~~~~~~~~Dls~~~~~~~   67 (254)
                      ++||++||.|+ |.+|..-++.|.+.|++|++++..... .....++-             -.....+.+..+|.+--.+
T Consensus        10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~n~~   88 (113)
T d1pjqa1          10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDTVNQR   88 (113)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHHHHHH
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCCCHHHHHH
Confidence            68999999999 669999999999999999998875543 22222211             0113334444555554455


Q ss_pred             HHHHHHHHcCCCcEEEeCCcc
Q psy12833         68 AVLLCKDSFGKLDVNVNCAGI   88 (254)
Q Consensus        68 ~~~~~~~~~~~id~li~~ag~   88 (254)
                      +.+..++    -.++||.+..
T Consensus        89 i~~~a~~----~~ilVNv~D~  105 (113)
T d1pjqa1          89 VSDAAES----RRIFCNVVDA  105 (113)
T ss_dssp             HHHHHHH----TTCEEEETTC
T ss_pred             HHHHHHH----cCCEEEeCCC
Confidence            5555544    3667776653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00033  Score=45.29  Aligned_cols=73  Identities=18%  Similarity=0.186  Sum_probs=51.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++||+++|.|. |..|.++++.|.++|++|++.+.+.....  .+++.....+...... .+    .+.       .+|.
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~~~~~~~~~~~-~~----~~~-------~~d~   67 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLPEAVERHTGSLN-DE----WLM-------AADL   67 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSCTTSCEEESBCC-HH----HHH-------HCSE
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHhhccceeecccc-hh----hhc-------cCCE
Confidence            57999999998 77899999999999999999998654221  1223334444444432 11    122       5799


Q ss_pred             EEeCCccC
Q psy12833         82 NVNCAGIS   89 (254)
Q Consensus        82 li~~ag~~   89 (254)
                      +|...|+.
T Consensus        68 vi~SPGi~   75 (93)
T d2jfga1          68 IVASPGIA   75 (93)
T ss_dssp             EEECTTSC
T ss_pred             EEECCCCC
Confidence            99999874

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.43  E-value=8.2e-05  Score=53.91  Aligned_cols=74  Identities=22%  Similarity=0.232  Sum_probs=50.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCCcE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKLDV   81 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~id~   81 (254)
                      +.+|||+||+||+|.+.++-....|++|+.+.+++++.+.+ .+++.....   |   .+   +...+.....  +++|+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-~~lGad~vi---~---~~---~~~~~~~~~~~~~gvd~   93 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEVI---S---RE---DVYDGTLKALSKQQWQG   93 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEEE---E---HH---HHCSSCCCSSCCCCEEE
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-HhhcccceE---e---cc---chhchhhhcccCCCceE
Confidence            56899999999999999987777899999999988877665 445443321   1   11   1111111211  36899


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      +|.+.|
T Consensus        94 vid~vg   99 (167)
T d1tt7a2          94 AVDPVG   99 (167)
T ss_dssp             EEESCC
T ss_pred             EEecCc
Confidence            998876

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.42  E-value=0.0013  Score=46.34  Aligned_cols=73  Identities=25%  Similarity=0.263  Sum_probs=50.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      .++++.|+|+ |.+|..++..|+.+|.  ++++.+++++.++-...++       ...+.....|..             
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~-------------   70 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD-------------   70 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG-------------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH-------------
Confidence            3578999997 9999999999998875  7999999877654433333       223333333321             


Q ss_pred             HHcCCCcEEEeCCccCC
Q psy12833         74 DSFGKLDVNVNCAGISC   90 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~   90 (254)
                       ....-|++|.++|...
T Consensus        71 -~l~daDvvvitag~~~   86 (148)
T d1ldna1          71 -DCRDADLVVICAGANQ   86 (148)
T ss_dssp             -GTTTCSEEEECCSCCC
T ss_pred             -HhccceeEEEeccccc
Confidence             1236799999998753

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.40  E-value=9.1e-05  Score=54.06  Aligned_cols=77  Identities=14%  Similarity=0.085  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc--CCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF--GKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~~i   79 (254)
                      +|.+++|.|+ |++|...++.+...|+ +|+++++++++.+.. ++++.. ++  +|..+.+    ..+++.+..  ..+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lGa~-~~--i~~~~~~----~~~~v~~~t~g~G~   97 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYGAT-DI--LNYKNGH----IEDQVMKLTNGKGV   97 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHTCS-EE--ECGGGSC----HHHHHHHHTTTSCE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-HhhCcc-cc--ccccchh----HHHHHHHHhhccCc
Confidence            5788999987 8999999988888897 699999987775554 556542 22  2333322    223333332  259


Q ss_pred             cEEEeCCcc
Q psy12833         80 DVNVNCAGI   88 (254)
Q Consensus        80 d~li~~ag~   88 (254)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999984

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.35  E-value=0.0006  Score=47.84  Aligned_cols=114  Identities=15%  Similarity=0.106  Sum_probs=66.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhC--CCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++.|+||+|.+|.+++..|+.+|.  ++++++.+..+.+.+  .+.  ........-+ ...+..+.++       .-|+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~--Dl~~~~~~~~~~~~~-~~~~~~~~~~-------~aDi   71 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA--DLSHIETRATVKGYL-GPEQLPDCLK-------GCDV   71 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH--HHTTSSSSCEEEEEE-SGGGHHHHHT-------TCSE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH--HHhhhhhhcCCCeEE-cCCChHHHhC-------CCCE
Confidence            689999999999999999998885  799999876543332  221  1111111111 1222223333       6899


Q ss_pred             EEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         82 NVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      +|..+|......         ++   -.+.++.|..-.    +...+.+.+..+     ++.++++|..
T Consensus        72 vVitag~~~~~g---------~s---R~~ll~~N~~i~----~~i~~~i~~~~p-----~~iiivvtNP  119 (144)
T d1mlda1          72 VVIPAGVPRKPG---------MT---RDDLFNTNATIV----ATLTAACAQHCP-----DAMICIISNP  119 (144)
T ss_dssp             EEECCSCCCCTT---------CC---GGGGHHHHHHHH----HHHHHHHHHHCT-----TSEEEECSSC
T ss_pred             EEECCCcCCCCC---------CC---cchHHHHHHHHH----HHHHHHHHhcCC-----CeEEEEecCc
Confidence            999999643221         11   222355555443    444555554431     5677777654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=0.00014  Score=53.08  Aligned_cols=46  Identities=30%  Similarity=0.351  Sum_probs=38.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP   50 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   50 (254)
                      +.++||+||+||+|...++-....|++|+.++|++++.+.+ ++++.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~lGa   77 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLGA   77 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTE
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhhcc
Confidence            35899999999999999998888899999999988876655 45543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.27  E-value=0.00065  Score=49.29  Aligned_cols=80  Identities=23%  Similarity=0.265  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++++++++ +.++++.... +...-.| +......+...  .+++|+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~Ga~~~-i~~~~~~-~~~~~~~~~~~--~~G~d~  101 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKALGATDC-LNPRELD-KPVQDVITELT--AGGVDY  101 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTCSEE-ECGGGCS-SCHHHHHHHHH--TSCBSE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHhCCCcc-cCCccch-hhhhhhHhhhh--cCCCcE
Confidence            5789999976 9999999999989998 5778888877654 4566654332 2211111 12233333222  248999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.|+|.
T Consensus       102 vie~~G~  108 (174)
T d1e3ia2         102 SLDCAGT  108 (174)
T ss_dssp             EEESSCC
T ss_pred             EEEeccc
Confidence            9999984

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.26  E-value=0.00012  Score=52.24  Aligned_cols=77  Identities=19%  Similarity=0.077  Sum_probs=45.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC---------EEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG---------RVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAV   69 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~---------~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~   69 (254)
                      +.-++.|+||+|.+|..++..|+..+.         +++...++.+.++....++    ......+...-.+    .+.+
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   78 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDP----KVAF   78 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCH----HHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCch----hhhc
Confidence            344899999999999999999987653         2222333334444333333    1222333332222    1222


Q ss_pred             HHHHHHcCCCcEEEeCCccCC
Q psy12833         70 LLCKDSFGKLDVNVNCAGISC   90 (254)
Q Consensus        70 ~~~~~~~~~id~li~~ag~~~   90 (254)
                             ...|++|..+|...
T Consensus        79 -------~~advViitaG~~~   92 (154)
T d1y7ta1          79 -------KDADYALLVGAAPR   92 (154)
T ss_dssp             -------TTCSEEEECCCCCC
T ss_pred             -------ccccEEEeecCcCC
Confidence                   37899999999753

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.26  E-value=0.0006  Score=49.36  Aligned_cols=80  Identities=26%  Similarity=0.385  Sum_probs=51.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      +|.+++|.|+ +|+|...++.+...|+ .|+.+++++++. +..++++..-.+..-+-  .+.+.+.++...  .+++|+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~lGa~~~i~~~~~--~~~~~~~~~~~~--~~g~D~  101 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFGATECINPQDF--SKPIQEVLIEMT--DGGVDY  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHTCSEEECGGGC--SSCHHHHHHHHT--TSCBSE
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHhCCcEEEeCCch--hhHHHHHHHHHc--CCCCcE
Confidence            5789999998 5999999998888897 566666666554 45567764332211121  122333333332  247999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.++|.
T Consensus       102 vid~~G~  108 (176)
T d2fzwa2         102 SFECIGN  108 (176)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999873

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.24  E-value=0.0032  Score=44.74  Aligned_cols=114  Identities=18%  Similarity=0.103  Sum_probs=69.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      ++.+++.|.|+ |.+|.+++..|+.+|.  ++++++++++..+-...++       +........|.++           
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~-----------   85 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV-----------   85 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG-----------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh-----------
Confidence            34678889997 9999999999999986  8999999876654333222       2222222233322           


Q ss_pred             HHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccc
Q psy12833         73 KDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA  151 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~  151 (254)
                         ...-|++|..||......         ++-   .+.+..|.    .+.+...+.+.+..+     ++.++++|--.
T Consensus        86 ---~~~adiVVitAg~~~~~g---------~tR---~~l~~~N~----~i~~~i~~~i~~~~p-----~aiiivvtNPv  140 (160)
T d1i0za1          86 ---TANSKIVVVTAGVRQQEG---------ESR---LNLVQRNV----NVFKFIIPQIVKYSP-----DCIIIVVSNPV  140 (160)
T ss_dssp             ---GTTCSEEEECCSCCCCTT---------CCG---GGGHHHHH----HHHHHHHHHHHHHCT-----TCEEEECSSSH
T ss_pred             ---cccccEEEEecCCccccC---------cch---HHHHHHHH----HHHHHHHHHHHhcCC-----CcEEEEeCCch
Confidence               226799999999653221         111   12233333    456666666666542     56777776543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.22  E-value=0.00077  Score=47.61  Aligned_cols=78  Identities=13%  Similarity=0.042  Sum_probs=53.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++.|.||.|-+|..+++.|.++|++|.+.+|+.....+...+ ...+.....   ...++...+.++.....+=.+++.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~-~~~~v~~~~---~~~~~~~v~~~~~~~~~~~~iiiD   85 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA-NADVVIVSV---PINLTLETIERLKPYLTENMLLAD   85 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT-TCSEEEECS---CGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh-hcccccccc---chhhheeeeecccccccCCceEEE
Confidence            6899999999999999999999999999999987765544322 222333332   345666677777665444345554


Q ss_pred             CC
Q psy12833         85 CA   86 (254)
Q Consensus        85 ~a   86 (254)
                      .+
T Consensus        86 ~~   87 (152)
T d2pv7a2          86 LT   87 (152)
T ss_dssp             CC
T ss_pred             ec
Confidence            44

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.00092  Score=47.25  Aligned_cols=74  Identities=16%  Similarity=0.166  Sum_probs=57.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      .++|.|. +.+|+.+++.|.++|.+|+++..+++...+..++. ...+.++..|.+|++.++++--      .+.|.+|.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i------~~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGI------DRCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTT------TTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhcc------ccCCEEEE
Confidence            4778887 79999999999999999999999887665555443 5678999999999875444321      36788876


Q ss_pred             CC
Q psy12833         85 CA   86 (254)
Q Consensus        85 ~a   86 (254)
                      ..
T Consensus        78 ~~   79 (153)
T d1id1a_          78 LS   79 (153)
T ss_dssp             CS
T ss_pred             cc
Confidence            64

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.22  E-value=0.0087  Score=41.69  Aligned_cols=33  Identities=21%  Similarity=0.200  Sum_probs=29.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPT   38 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~   38 (254)
                      ++.|+||+|.+|.+++..|+.+|.  +++++++++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            589999999999999999999984  899999875

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.18  E-value=0.0004  Score=50.58  Aligned_cols=43  Identities=16%  Similarity=0.149  Sum_probs=38.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE   47 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~   47 (254)
                      +|++-|.|+ |.+|.+++..|+++|++|.+.+|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            479999999 9999999999999999999999998887776653

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.18  E-value=0.0018  Score=46.28  Aligned_cols=80  Identities=13%  Similarity=0.025  Sum_probs=54.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----------CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----------GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----------~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      ++.|.|. |-+|.++++.|.++|++|++.+|+++..++..+.-           -.+...+-. ....++++++++++..
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIil-avp~~~~~~vl~~l~~   79 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFL-CTPIQLILPTLEKLIP   79 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEE-CSCHHHHHHHHHHHGG
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccc-cCcHhhhhhhhhhhhh
Confidence            4667766 99999999999999999999999987766654421           011222222 2246778888888876


Q ss_pred             HcCCCcEEEeCCc
Q psy12833         75 SFGKLDVNVNCAG   87 (254)
Q Consensus        75 ~~~~id~li~~ag   87 (254)
                      ...+=.+++..++
T Consensus        80 ~l~~~~iv~~~~s   92 (165)
T d2f1ka2          80 HLSPTAIVTDVAS   92 (165)
T ss_dssp             GSCTTCEEEECCS
T ss_pred             hcccccceeeccc
Confidence            6555556655543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.16  E-value=0.00091  Score=47.92  Aligned_cols=76  Identities=21%  Similarity=0.252  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +|.+++|.|+ |++|...++.+...|++|+.+++++++++.. ++++... ++  |.++.+..+    .+.+...+.+.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a-~~~Ga~~-~i--~~~~~~~~~----~~~~~~~g~~~~   97 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA-RKLGASL-TV--NARQEDPVE----AIQRDIGGAHGV   97 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSE-EE--ETTTSCHHH----HHHHHHSSEEEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh-hccCccc-cc--cccchhHHH----HHHHhhcCCccc
Confidence            5789999886 9999999988888899999999988777654 4555432 22  333333333    233333455555


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      |.+++
T Consensus        98 i~~~~  102 (166)
T d1llua2          98 LVTAV  102 (166)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            55554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.14  E-value=0.0022  Score=44.90  Aligned_cols=114  Identities=14%  Similarity=0.124  Sum_probs=66.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      |++.|+|+ |.+|.+++..|+.+|.  ++++.+++++.++-...++       .........|.   +           .
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~-----------~   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---A-----------A   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---G-----------G
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---H-----------H
Confidence            67889996 8999999999998874  8999999877654333322       22223333332   1           1


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      ...-|++|..||....... .       +-.+-.+.++.|.    .+.+...+.+.+..+     ++.++++|--
T Consensus        67 l~~adiVVitaG~~~~~~~-~-------~g~~R~~l~~~N~----~i~~~i~~~i~~~~p-----~aivivvtNP  124 (146)
T d1hyha1          67 LADADVVISTLGNIKLQQD-N-------PTGDRFAELKFTS----SMVQSVGTNLKESGF-----HGVLVVISNP  124 (146)
T ss_dssp             GTTCSEEEECCSCGGGTC---------------CTTHHHHH----HHHHHHHHHHHHTTC-----CSEEEECSSS
T ss_pred             hccccEEEEeccccccccc-c-------CCccHHHHHHHHH----HHHHHHHHHHhhcCC-----CeEEEEecCc
Confidence            2267999999986432110 0       1111122334443    455666666665542     5677766653

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.13  E-value=0.0044  Score=43.09  Aligned_cols=109  Identities=19%  Similarity=0.176  Sum_probs=64.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh-------CCCceEEec-CCCCHHHHHHHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL-------GPDVKFAPV-DVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~-Dls~~~~~~~~~~~~~~~   75 (254)
                      |++.|+|+ |.+|.+++..|+.++. ++++.+.+++..+.....+       ........+ |..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            56778896 9999999999988874 8999999887655444333       222223322 2221              


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      ...-|++|.+||......            ++-.+.+..|.    .+.+...+.+.+..+     ++.++++|-
T Consensus        67 ~~~advvvitag~~~~~~------------~~r~dl~~~N~----~i~~~i~~~i~k~~p-----~aivivvtN  119 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKPG------------MSREDLIKVNA----DITRACISQAAPLSP-----NAVIIMVNN  119 (142)
T ss_dssp             GTTCSEEEECCSCC---------------------CHHHHH----HHHHHHHHHHGGGCT-----TCEEEECSS
T ss_pred             hcCCCEEEEeeeccCCcC------------cchhHHHhHHH----HHHHHHHHHHhccCC-----CceEEEeCC
Confidence            126799999999653221            22223344443    466777777776542     466665544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.08  E-value=0.0018  Score=46.08  Aligned_cols=80  Identities=11%  Similarity=0.044  Sum_probs=57.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----------CCCceEEecCCCCHHHHHHHH---HHHH
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----------GPDVKFAPVDVTSEEDVQKAV---LLCK   73 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dls~~~~~~~~~---~~~~   73 (254)
                      +-|.|- |-+|..+|+.|+++|++|++.+|++++.+++.+..          -.+...+-+-+.+.+++++++   +.+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            556655 89999999999999999999999988877766432          123455666677888888877   3344


Q ss_pred             HHcCCCcEEEeCCc
Q psy12833         74 DSFGKLDVNVNCAG   87 (254)
Q Consensus        74 ~~~~~id~li~~ag   87 (254)
                      ....+-+++|.+..
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            44444566666644

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.04  E-value=0.0049  Score=44.44  Aligned_cols=82  Identities=10%  Similarity=-0.012  Sum_probs=62.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------------------CCCceEEecCCCCHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------------------GPDVKFAPVDVTSEEDVQ   66 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------------------~~~~~~~~~Dls~~~~~~   66 (254)
                      +.+-|.|- |-+|..+++.|+++|++|++.+|++++.+++.++-                  -.....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            34666776 89999999999999999999999999888776531                  122344555667778888


Q ss_pred             HHHHHHHHHcCCCcEEEeCCc
Q psy12833         67 KAVLLCKDSFGKLDVNVNCAG   87 (254)
Q Consensus        67 ~~~~~~~~~~~~id~li~~ag   87 (254)
                      +..+.+.....+=+++|.+..
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888888877666677777654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.02  E-value=0.001  Score=47.60  Aligned_cols=46  Identities=33%  Similarity=0.347  Sum_probs=37.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP   50 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   50 (254)
                      +|.+++|.|+ |++|...++.+...|++|+++++++++++.. ++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~-k~~Ga   72 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGA   72 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTC
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh-hhcCc
Confidence            5789999976 8999998888888899999999988887655 44554

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.01  E-value=0.00094  Score=45.80  Aligned_cols=72  Identities=22%  Similarity=0.317  Sum_probs=54.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEE-eeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVL-CDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++.|.|++|.+|+++++.+.++|++++. ++++....      + .+.. +..|+|.|+...+.++.+.+.  ++-+++-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~-~~~D-VvIDFS~p~~~~~~l~~~~~~--~~p~ViG   71 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L-DSPD-VVIDFSSPEALPKTVDLCKKY--RAGLVLG   71 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C-SCCS-EEEECSCGGGHHHHHHHHHHH--TCEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h-ccCC-EEEEecCHHHHHHHHHHHHhc--CCCEEEE
Confidence            5899999999999999999999998764 34433211      1 1122 567999999999999999887  6777776


Q ss_pred             CCc
Q psy12833         85 CAG   87 (254)
Q Consensus        85 ~ag   87 (254)
                      ..|
T Consensus        72 TTG   74 (128)
T d1vm6a3          72 TTA   74 (128)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            666

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.01  E-value=0.0011  Score=48.01  Aligned_cols=79  Identities=20%  Similarity=0.256  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHH-HHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEE-DVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~-~~~~~~~~~~~~~~~id   80 (254)
                      +|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++.. ++++.... +  |.++.+ .+.+..+..  ..+.+|
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a-~~lGa~~~-i--~~~~~d~~~~~~~~~~--~~~G~d   99 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGATEC-L--NPKDYDKPIYEVICEK--TNGGVD   99 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTCSEE-E--CGGGCSSCHHHHHHHH--TTSCBS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH-HHcCCcEE-E--cCCCchhHHHHHHHHh--cCCCCc
Confidence            5789999996 8999999999988997 688889988877655 55554322 2  222111 122222222  124799


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|-++|.
T Consensus       100 ~vid~~g~  107 (174)
T d1p0fa2         100 YAVECAGR  107 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCC
Confidence            99998873

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.00  E-value=0.0061  Score=42.98  Aligned_cols=78  Identities=21%  Similarity=0.128  Sum_probs=51.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHH
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      |-+.+++.|.|+ |.+|..++..|+..+. ++++.+.+++.++-....+       +.+......+  +.+   +.++  
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--~~~---~~~~--   75 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEY--SYE---AALT--   75 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEEC--SHH---HHHT--
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccC--chh---hhhc--
Confidence            346688999998 9999999998888884 8999999887655444332       2222222221  221   1222  


Q ss_pred             HHHcCCCcEEEeCCccCCC
Q psy12833         73 KDSFGKLDVNVNCAGISCA   91 (254)
Q Consensus        73 ~~~~~~id~li~~ag~~~~   91 (254)
                           .-|++|..+|....
T Consensus        76 -----~adiVvitag~~~~   89 (154)
T d1pzga1          76 -----GADCVIVTAGLTKV   89 (154)
T ss_dssp             -----TCSEEEECCSCSSC
T ss_pred             -----CCCeEEEecccccC
Confidence                 67999999987643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.99  E-value=0.00039  Score=50.65  Aligned_cols=45  Identities=18%  Similarity=0.400  Sum_probs=39.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL   48 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   48 (254)
                      ++||+++|.|+ ||.+++++..|.+.| +|++..|+.++.+++.+++
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            57999999988 789999999997766 9999999999988887655

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.98  E-value=0.00073  Score=49.03  Aligned_cols=103  Identities=16%  Similarity=0.066  Sum_probs=57.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-------EEEEeeCCCc--hhHHHHHHh---C-CCceEEecCCCCHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG-------RVVLCDLPTS--EGESVAKEL---G-PDVKFAPVDVTSEEDVQKAVL   70 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~---~-~~~~~~~~Dls~~~~~~~~~~   70 (254)
                      ..+|.||||+|.||..++..|+....       .+.+.+.+..  .++...-++   . .....+.. -++.   .+.  
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~---~~~--   97 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDP---YEV--   97 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCH---HHH--
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccc---hhh--
Confidence            34799999999999999999987531       4555555443  223333232   1 11111111 1121   222  


Q ss_pred             HHHHHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Q psy12833         71 LCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHEN  133 (254)
Q Consensus        71 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  133 (254)
                           +...|++|..+|......         ++.   .+.+..|.    .+.+...+.+.+.
T Consensus        98 -----~~~aDvVvi~ag~~rkpg---------~tR---~Dll~~N~----~I~k~~~~~i~~~  139 (175)
T d7mdha1          98 -----FEDVDWALLIGAKPRGPG---------MER---AALLDING----QIFADQGKALNAV  139 (175)
T ss_dssp             -----TTTCSEEEECCCCCCCTT---------CCH---HHHHHHHH----HHHHHHHHHHHHH
T ss_pred             -----ccCCceEEEeeccCCCCC---------CcH---HHHHHHHH----HHHHHHHHHHHhh
Confidence                 237899999998753222         333   34455553    4456666666654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.98  E-value=0.012  Score=40.72  Aligned_cols=109  Identities=18%  Similarity=0.125  Sum_probs=66.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCc--hhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPTS--EGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~--~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++.|+||+|.+|.+++..|..++.  ++++.+.+..  .++-...++      ..+......|..              .
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~--------------~   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE--------------D   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG--------------G
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH--------------H
Confidence            688999999999999999998885  7889886432  222111111      333443333332              1


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      ...-|++|..||......            ++-.+.++.|.    .+.+...+.+.+..+     ++.++.+|-
T Consensus        68 ~~~aDiVvitaG~~~~~g------------~~R~dl~~~N~----~I~~~i~~~i~~~~p-----~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQPG------------QTRIDLAGDNA----PIMEDIQSSLDEHND-----DYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCCTT------------CCHHHHHHHHH----HHHHHHHHHHHTTCS-----CCEEEECCS
T ss_pred             hhhcCEEEEecccccccC------------CchhhHHHHHH----HHHHHHHHHHHhcCC-----CceEEEecC
Confidence            236899999999643211            22334455544    445666777766542     566776654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.97  E-value=0.0035  Score=44.52  Aligned_cols=112  Identities=17%  Similarity=0.074  Sum_probs=65.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      +..++.|+|+ |.+|..++..|+.+|.  ++++++++.+.++-...++       +........|.+             
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~-------------   83 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN-------------   83 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG-------------
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh-------------
Confidence            3456888896 9999999999998875  7999999876654333333       222222222332             


Q ss_pred             HHcCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                       ....-|++|..+|.........      .+      .++.|    ..+.+...+.+.+..+     ++.++++|--
T Consensus        84 -~~~~adivvitag~~~~~~~~R------~d------ll~~N----~~i~~~i~~~i~~~~p-----~~ivivvtNP  138 (159)
T d2ldxa1          84 -VSANSKLVIITAGARMVSGQTR------LD------LLQRN----VAIMKAIVPGVIQNSP-----DCKIIVVTNP  138 (159)
T ss_dssp             -GGTTEEEEEECCSCCCCTTTCS------SC------TTHHH----HHHHHHHTTTHHHHST-----TCEEEECSSS
T ss_pred             -hhccccEEEEecccccCCCCCH------HH------HHHHH----HHHHHHHHHHHhccCC-----CeEEEEeCCc
Confidence             2236799999998654332111      11      12223    3335555666655442     5777777653

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.94  E-value=0.0068  Score=43.03  Aligned_cols=81  Identities=11%  Similarity=0.088  Sum_probs=57.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----------CCCceEEecCCCCHHHHHHHHHH---H
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----------GPDVKFAPVDVTSEEDVQKAVLL---C   72 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dls~~~~~~~~~~~---~   72 (254)
                      ++-+.|- |-+|.++|++|.++|++|.+.+|+.++.+.+..+-          -.....+...+.+.+.++.++..   +
T Consensus         3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            5666654 89999999999999999999999988776655322          23345666667788888877654   3


Q ss_pred             HHHcCCCcEEEeCCc
Q psy12833         73 KDSFGKLDVNVNCAG   87 (254)
Q Consensus        73 ~~~~~~id~li~~ag   87 (254)
                      .....+=+++|.+..
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            444444466776654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.94  E-value=0.003  Score=43.98  Aligned_cols=108  Identities=17%  Similarity=0.107  Sum_probs=60.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHhCC------CceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKELGP------DVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++.|+|+ |.+|.+++..|+.++.  ++++++++++.++-...++..      .......   ++           +...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~-----------~~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY-----------SDVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GGGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH-----------HHhC
Confidence            4666697 9999999999998875  899999988765544444421      1111111   11           1233


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      .-|++|..+|.....            .++-...+..|.    .+.+...+.+.+..+     ++.++++|-
T Consensus        68 ~adivvitag~~~~~------------~~~r~~l~~~N~----~i~~~i~~~i~~~~p-----~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP------------GETRLDLAKKNV----MIAKEVTQNIMKYYN-----HGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC------------------CHHHHHHHHH----HHHHHHHHHHHHHCC-----SCEEEECSS
T ss_pred             CCceEEEecccccCc------------CcchhHHhhHHH----HHHHHHHHHhhccCC-----CceEEEecC
Confidence            679999999865321            122233444444    445555666665431     466766654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.91  E-value=0.014  Score=40.33  Aligned_cols=108  Identities=19%  Similarity=0.183  Sum_probs=65.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          6 VGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++.|.|+ |.+|.+++..|+.++  .++++.+++++.++-...++      ..+......|.   +           ...
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~-----------~~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---A-----------DLK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---G-----------GGT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---H-----------Hhc
Confidence            5677797 899999999998887  48999999877655433332      22333333332   1           112


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      .-|++|.++|......         ++-   .+.+..|.    .+.+...+.+.+..+     ++.++++|-
T Consensus        67 ~adivvitag~~~~~g---------~~r---~dl~~~N~----~I~~~i~~~i~~~~p-----~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKPG---------ETR---LQLLGRNA----RVMKEIARNVSKYAP-----DSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCSS---------CCH---HHHHHHHH----HHHHHHHHHHHHHCT-----TCEEEECSS
T ss_pred             CCCEEEEecccccCCC---------cch---hhhhcccc----chHHHHHHHHHhcCC-----CcEEEEeCC
Confidence            6799999998754321         222   22334443    356666666666542     466666553

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.89  E-value=0.0013  Score=47.44  Aligned_cols=78  Identities=19%  Similarity=0.284  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|.+++|.|+ |++|...++.+...|+ .|+++++++++++.. ++++.. +++.  .++ +.++...+...  ..++|+
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~-~~~ga~-~~i~--~~~-~~~~~~~~~~~--~~g~d~  103 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-ERLGAD-HVVD--ARR-DPVKQVMELTR--GRGVNV  103 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-HHTTCS-EEEE--TTS-CHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHH-hhcccc-eeec--Ccc-cHHHHHHHhhC--CCCceE
Confidence            4789999986 9999999888877886 667778877665544 445432 2332  222 22333332111  136999


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.++|.
T Consensus       104 vid~~g~  110 (172)
T d1h2ba2         104 AMDFVGS  110 (172)
T ss_dssp             EEESSCC
T ss_pred             EEEecCc
Confidence            9999884

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.85  E-value=0.0062  Score=43.35  Aligned_cols=77  Identities=16%  Similarity=0.245  Sum_probs=60.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ..+++|.|+ |-.|.+-++.....|+.|.+.+.+.+.++++.+....++.+.   .++.+.+.+.+.       .-|++|
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~-------~aDivI  100 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVA-------EADLLI  100 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHH-------TCSEEE
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhc-------cCcEEE
Confidence            468999998 778888888889999999999999999998887776655554   345666666555       679999


Q ss_pred             eCCccCCC
Q psy12833         84 NCAGISCA   91 (254)
Q Consensus        84 ~~ag~~~~   91 (254)
                      ..+-+.+.
T Consensus       101 ~aalipG~  108 (168)
T d1pjca1         101 GAVLVPGR  108 (168)
T ss_dssp             ECCCCTTS
T ss_pred             EeeecCCc
Confidence            98876543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.77  E-value=0.0077  Score=41.40  Aligned_cols=75  Identities=15%  Similarity=0.126  Sum_probs=53.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEEE-eeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          6 VGLVTGGASGLGKATVERIVRE-GGRVVL-CDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~-g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++.|.|++|.+|+++++...+. +++++. +++.. .+.....   .+.. +..|+|.|+...+.++.+.+.  ++-+++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~~~~---~~~D-vvIDFS~p~~~~~~~~~~~~~--~~~~Vi   73 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSLLTD---GNTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVV   73 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHHHHT---TTCS-EEEECCCTTTHHHHHHHHHHT--TCEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhhhcc---ccCC-EEEEcccHHHHHHHHHHHHhc--CCCEEE
Confidence            5889999999999999987654 567653 45433 2222221   1222 668999999999999999886  677777


Q ss_pred             eCCc
Q psy12833         84 NCAG   87 (254)
Q Consensus        84 ~~ag   87 (254)
                      -..|
T Consensus        74 GTTG   77 (135)
T d1yl7a1          74 GTTG   77 (135)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            5555

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.71  E-value=0.012  Score=40.87  Aligned_cols=109  Identities=17%  Similarity=0.142  Sum_probs=63.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      ++.|+|+ |.+|.+++..|+.+|.  ++++++++++.++-...++      .........+  +.+    .+       .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~----~~-------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPE----IC-------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGG----GG-------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHH----Hh-------h
Confidence            5677797 9999999999998885  8999999886654332222      1222222221  111    11       2


Q ss_pred             CCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      .-|++|..+|......         ++-   .+.+..|.    .+.+...+.+.+..+     ++.++++|-
T Consensus        69 daDvVVitaG~~~~~g---------~~R---~dl~~~N~----~i~~~i~~~i~~~~p-----~ai~ivvtN  119 (143)
T d1llda1          69 DADMVVITAGPRQKPG---------QSR---LELVGATV----NILKAIMPNLVKVAP-----NAIYMLITN  119 (143)
T ss_dssp             TCSEEEECCCCCCCTT---------CCH---HHHHHHHH----HHHHHHHHHHHHHCT-----TSEEEECCS
T ss_pred             CCcEEEEecccccCCC---------Cch---hhhhhhhH----HHHHHHHHHHHhhCC-----CeEEEEeCC
Confidence            5799999999643221         222   23445554    344555555555441     466666664

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.59  E-value=0.023  Score=39.23  Aligned_cols=71  Identities=21%  Similarity=0.225  Sum_probs=48.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          6 VGLVTGGASGLGKATVERIVREG--GRVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++.|+|+ |.+|.+++..|+..|  .++++.+++++.++-....+       ..+......+  |.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            4777897 999999999999988  48999999987665443322       2334333322  2221           2


Q ss_pred             CCCcEEEeCCccCC
Q psy12833         77 GKLDVNVNCAGISC   90 (254)
Q Consensus        77 ~~id~li~~ag~~~   90 (254)
                      ...|++|.++|...
T Consensus        68 ~dadvvvitag~~~   81 (142)
T d1guza1          68 ANSDIVIITAGLPR   81 (142)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             cCCeEEEEEEecCC
Confidence            36899999998743

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.014  Score=40.62  Aligned_cols=112  Identities=19%  Similarity=0.137  Sum_probs=63.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-C--CEEEEeeCCCchhHHHHHHh---CCCc-eEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          6 VGLVTGGASGLGKATVERIVRE-G--GRVVLCDLPTSEGESVAKEL---GPDV-KFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~-g--~~v~~~~r~~~~~~~~~~~~---~~~~-~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++.|+|++|.+|.+++..|+.+ +  .++.+.+..+ ..+-..-++   .... ......-.+.+    .++       .
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~----~~~-------~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP----ALE-------G   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHH----HHT-------T
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcc----ccC-------C
Confidence            6889999999999999988643 4  5899999864 333222233   1111 11122333333    222       5


Q ss_pred             CcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         79 LDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      -|++|..+|......         ++   -.+.+..|.    .+.+...+.+.+..+     ++.++++|.-
T Consensus        70 aDvvvitaG~~~k~g---------~~---R~dl~~~N~----~i~~~v~~~i~~~~p-----~aivivvtNP  120 (145)
T d2cmda1          70 ADVVLISAGVRRKPG---------MD---RSDLFNVNA----GIVKNLVQQVAKTCP-----KACIGIITNP  120 (145)
T ss_dssp             CSEEEECCSCCCCTT---------CC---GGGGHHHHH----HHHHHHHHHHHHHCT-----TSEEEECSSS
T ss_pred             CCEEEECCCccCCCC---------cc---hhhHHHHHH----HHHHHHHHHHHhhCC-----CcEEEEccCC
Confidence            799999999753222         12   222345553    344555555555432     4667777654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.58  E-value=0.015  Score=41.39  Aligned_cols=81  Identities=9%  Similarity=0.014  Sum_probs=56.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------------CCCceEEecCCCCHHHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------------GPDVKFAPVDVTSEEDVQKAV   69 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dls~~~~~~~~~   69 (254)
                      |+++|.|. |-||..+++.|.+.|+  +|+..+|+++..+...+..             .....++.+. ..++.+.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila-~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-SPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-SCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc-CCchhhhhhh
Confidence            57899986 9999999999999996  7888999887776655431             0112233332 3467788888


Q ss_pred             HHHHHHcCCCcEEEeCCc
Q psy12833         70 LLCKDSFGKLDVNVNCAG   87 (254)
Q Consensus        70 ~~~~~~~~~id~li~~ag   87 (254)
                      +++.....+-.+++...+
T Consensus        80 ~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHSCTTCEEEECCS
T ss_pred             hhhhcccccccccccccc
Confidence            888877655556655544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0018  Score=47.59  Aligned_cols=41  Identities=24%  Similarity=0.207  Sum_probs=36.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK   46 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~   46 (254)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.+++..+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~   45 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   45 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh
Confidence            68999999 789999999999999999999999887665554

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.016  Score=38.33  Aligned_cols=69  Identities=17%  Similarity=0.140  Sum_probs=54.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      .++.|.|| |-+|+-++....+.|+++++.+.+...-...     .--.++..|..|.+.+.++....     .+|++-+
T Consensus        12 ~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~-----va~~~i~~~~~d~~~l~~~~~~~-----~~DviT~   80 (111)
T d1kjqa2          12 TRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH-----VAHRSHVINMLDGDALRRVVELE-----KPHYIVP   80 (111)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG-----GSSEEEECCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             CEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhh-----cCCeEEECCCCCHHHHHHHHHhh-----CCceEEE
Confidence            57999995 8999999999999999999999876532211     11257889999999999988765     7898853

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.52  E-value=0.0011  Score=49.20  Aligned_cols=43  Identities=21%  Similarity=0.352  Sum_probs=37.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA   45 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~   45 (254)
                      ++||+++|-| .|.+|..+++.|.+.|++|++++.+........
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            6899999987 588999999999999999999998876665543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.0028  Score=49.66  Aligned_cols=24  Identities=17%  Similarity=0.188  Sum_probs=21.8

Q ss_pred             ChHHHHHHHHHHHcCCEEEEeeCC
Q psy12833         14 SGLGKATVERIVREGGRVVLCDLP   37 (254)
Q Consensus        14 ~giG~a~a~~l~~~g~~v~~~~r~   37 (254)
                      |..|.++|+.|..+|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            789999999999999999988654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.48  E-value=0.03  Score=39.06  Aligned_cols=116  Identities=19%  Similarity=0.143  Sum_probs=67.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      .++-|.|+ |.+|.+++..|..++. ++++.+++++..+-...++       +.+......+  +.           +..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc-----------ccc
Confidence            46888896 9999999988877774 8999999887655444333       3333343332  11           122


Q ss_pred             CCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEecc
Q psy12833         77 GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASI  150 (254)
Q Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~  150 (254)
                      ..-|++|.++|.........       ...+-...+..|.    .+.+.+.+.+.+..+     ++.++++|--
T Consensus        70 ~~advvvitag~~~~~g~~~-------~~~~R~~l~~~N~----~iv~~i~~~i~~~~p-----~aivivvtNP  127 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSD-------KEWNRDDLLPLNN----KIMIEIGGHIKKNCP-----NAFIIVVTNP  127 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCS-------TTCCGGGGHHHHH----HHHHHHHHHHHHHCT-----TSEEEECSSS
T ss_pred             CCCcEEEEecccccCCCCCc-------cccchhHHHHHHH----HHHHHHHHHHHhcCC-----CeEEEEecCc
Confidence            36899999999754432211       0011122344443    445555566655541     4666666653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.44  E-value=0.0062  Score=42.64  Aligned_cols=35  Identities=23%  Similarity=0.378  Sum_probs=31.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~   37 (254)
                      ++||++||+|| |.+|..-++.|.+.|++|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57999999999 669999999999999999998753

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.41  E-value=0.0088  Score=43.52  Aligned_cols=40  Identities=15%  Similarity=0.147  Sum_probs=34.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA   45 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~   45 (254)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.+++..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            56889999 88999999999999999999999987655443

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.41  E-value=0.0092  Score=42.90  Aligned_cols=79  Identities=20%  Similarity=0.172  Sum_probs=55.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC---------------------CCceEEecCCCCHHHH
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG---------------------PDVKFAPVDVTSEEDV   65 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~---------------------~~~~~~~~Dls~~~~~   65 (254)
                      +-|. |.|-+|.+++++|+++|++|++.+|++++.+++.++..                     .....+..-+.+...+
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            3344 45899999999999999999999999999888876531                     1223334445555666


Q ss_pred             HHHHHHHHHHcCCCcEEEeCC
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~a   86 (254)
                      ...+..+...+.+=++++.+.
T Consensus        83 ~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhhccccceecccC
Confidence            677777766665556666654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.28  E-value=0.0033  Score=46.29  Aligned_cols=79  Identities=19%  Similarity=0.212  Sum_probs=50.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.. ++++...  + .|-.+.+ +.+.+.++. ....+|+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-~~~Ga~~--~-~~~~~~~-~~~~i~~~t-~g~g~D~   97 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFEI--A-DLSLDTP-LHEQIAALL-GEPEVDC   97 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCEE--E-ETTSSSC-HHHHHHHHH-SSSCEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh-hhccccE--E-EeCCCcC-HHHHHHHHh-CCCCcEE
Confidence            5889999987 8999877777667787 788888887766544 4554322  1 2323322 222222222 1236899


Q ss_pred             EEeCCcc
Q psy12833         82 NVNCAGI   88 (254)
Q Consensus        82 li~~ag~   88 (254)
                      +|.+.|.
T Consensus        98 vid~vG~  104 (195)
T d1kola2          98 AVDAVGF  104 (195)
T ss_dssp             EEECCCT
T ss_pred             EEECccc
Confidence            9999884

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.27  E-value=0.0084  Score=41.99  Aligned_cols=42  Identities=24%  Similarity=0.394  Sum_probs=36.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-CEEEEeeCCCchhHHHHHHh
Q psy12833          6 VGLVTGGASGLGKATVERIVREG-GRVVLCDLPTSEGESVAKEL   48 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~   48 (254)
                      ++.+.|+ |-+|.++++.|.+.| ++|++++|++++.+++.++.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            4667777 999999999998887 89999999999988888775

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.26  E-value=0.015  Score=41.51  Aligned_cols=79  Identities=23%  Similarity=0.388  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHH-HHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEED-VQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~-~~~~~~~~~~~~~~id   80 (254)
                      +|.+++|.|+ +|+|...+..+...|+ +|+.+++++++++.. .+++..- ++  |..+.+. .++..+....  +++|
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a-~~~GAd~-~i--n~~~~~~~~~~~~~~~~~--~G~d  100 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGATD-FV--NPNDHSEPISQVLSKMTN--GGVD  100 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCCE-EE--CGGGCSSCHHHHHHHHHT--SCBS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH-HHcCCcE-EE--cCCCcchhHHHHHHhhcc--CCcc
Confidence            5789999986 7788888887888876 688888887777654 5565332 22  2222111 2222222222  3799


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|-++|.
T Consensus       101 ~vid~~G~  108 (175)
T d1cdoa2         101 FSLECVGN  108 (175)
T ss_dssp             EEEECSCC
T ss_pred             eeeeecCC
Confidence            99999884

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.25  E-value=0.0039  Score=42.51  Aligned_cols=70  Identities=16%  Similarity=0.120  Sum_probs=51.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |.++|.|. +.+|+.+++.|.  |..|+++..+++..+....   ..+.++.+|.++++.++++      ...+.+.+|.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~---~~~~~i~Gd~~~~~~L~~a------~i~~A~~vi~   68 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKA------NVRGARAVIV   68 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH---TTCEEEESCTTSHHHHHHT------TCTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh---cCccccccccCCHHHHHHh------hhhcCcEEEE
Confidence            45788875 889999999994  5668888988887776643   4688999999998755542      1235677776


Q ss_pred             CC
Q psy12833         85 CA   86 (254)
Q Consensus        85 ~a   86 (254)
                      +.
T Consensus        69 ~~   70 (129)
T d2fy8a1          69 NL   70 (129)
T ss_dssp             CC
T ss_pred             ec
Confidence            43

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.20  E-value=0.0069  Score=42.52  Aligned_cols=63  Identities=11%  Similarity=0.157  Sum_probs=47.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~a   86 (254)
                      +.+.| .|-+|.++++.|.+.|+++++++|+.++.+++.++++..+.      .+   .+++++       .-|++|.+.
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~------~~---~~~~~~-------~~dvIilav   65 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA------MS---HQDLID-------QVDLVILGI   65 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC------SS---HHHHHH-------TCSEEEECS
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee------ch---hhhhhh-------ccceeeeec
Confidence            55555 59999999999999999999999999888888777754321      12   333444       679999874

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.0064  Score=43.23  Aligned_cols=45  Identities=13%  Similarity=0.155  Sum_probs=38.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK   46 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~   46 (254)
                      ++||+++|.|-|.-+|+-++..|.++|++|+.+.+....+++...
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~   79 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE   79 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh
Confidence            579999999999999999999999999999998877665554443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.14  E-value=0.082  Score=36.30  Aligned_cols=108  Identities=16%  Similarity=0.086  Sum_probs=63.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCCchhHHHHHHh-------CCCceEEec-CCCCHHHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG--RVVLCDLPTSEGESVAKEL-------GPDVKFAPV-DVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~-Dls~~~~~~~~~~~~~~~   75 (254)
                      ++.|+|+ |.+|.+++..|+.+|.  ++++.+++++.++-..-++       ......... |..              .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~--------------~   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS--------------L   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG--------------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH--------------H
Confidence            5677796 9999999999998874  7999999876644322222       222333322 221              1


Q ss_pred             cCCCcEEEeCCccCCCccccccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEec
Q psy12833         76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS  149 (254)
Q Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss  149 (254)
                      ...-|++|..+|......         ++   -.+.+..|    ..+.+...+.+.+..+     ++.++++|-
T Consensus        67 ~~~adiVvitag~~~~~g---------~~---r~~l~~~n----~~i~~~i~~~i~~~~p-----~aivivvtN  119 (142)
T d1ojua1          67 LKGSEIIVVTAGLARKPG---------MT---RLDLAHKN----AGIIKDIAKKIVENAP-----ESKILVVTN  119 (142)
T ss_dssp             GTTCSEEEECCCCCCCSS---------CC---HHHHHHHH----HHHHHHHHHHHHTTST-----TCEEEECSS
T ss_pred             hccccEEEEeccccCCCC---------Cc---hHHHHHHh----hHHHHHHHHHHHhhCC-----CcEEEEecC
Confidence            126799999988643221         22   22333333    3445556666665541     466666655

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0056  Score=43.81  Aligned_cols=44  Identities=16%  Similarity=0.273  Sum_probs=39.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA   45 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~   45 (254)
                      ++||+++|.|-|.-+|+-++..|.++|++|+.+.+....+.+..
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~   80 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV   80 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHH
Confidence            57999999999999999999999999999999988776665443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.10  E-value=0.018  Score=36.99  Aligned_cols=72  Identities=18%  Similarity=0.126  Sum_probs=47.1

Q ss_pred             CCCcEEEEeCCCChHH-HHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLG-KATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG-~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      -+.|++.+.|- +|+| .++|+.|.++|+.|...++......+...+.+  +.....+-.  +           ...+.|
T Consensus         6 ~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~G--i~v~~g~~~--~-----------~i~~~d   69 (96)
T d1p3da1           6 RRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAG--AKIYIGHAE--E-----------HIEGAS   69 (96)
T ss_dssp             TTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTT--CEEEESCCG--G-----------GGTTCS
T ss_pred             hhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCC--CeEEECCcc--c-----------cCCCCC
Confidence            45688888886 3444 56899999999999999987554443334433  333333321  1           112679


Q ss_pred             EEEeCCccC
Q psy12833         81 VNVNCAGIS   89 (254)
Q Consensus        81 ~li~~ag~~   89 (254)
                      .+|...++.
T Consensus        70 ~vV~S~AI~   78 (96)
T d1p3da1          70 VVVVSSAIK   78 (96)
T ss_dssp             EEEECTTSC
T ss_pred             EEEECCCcC
Confidence            999998864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.10  E-value=0.03  Score=40.22  Aligned_cols=85  Identities=24%  Similarity=0.163  Sum_probs=55.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHH---------------HHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEE---------------DVQKA   68 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~---------------~~~~~   68 (254)
                      .-+++|.|| +-.|.+-++.....|++|.+.+.+.+.++++.+..+   .++..+..+.+               ..++.
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~---~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~  104 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG---KFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  104 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC---EECCC-----------------------CCH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc---ceEEEeccccccccccccchhhcCHHHHHHH
Confidence            357899998 788888888888999999999999999888876432   22222222221               12223


Q ss_pred             HHHHHHHcCCCcEEEeCCccCCCc
Q psy12833         69 VLLCKDSFGKLDVNVNCAGISCAF   92 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~ag~~~~~   92 (254)
                      -+.+.+...+-|++|..+-+.+..
T Consensus       105 ~~~l~~~l~~aDlVI~talipG~~  128 (183)
T d1l7da1         105 AEAVLKELVKTDIAITTALIPGKP  128 (183)
T ss_dssp             HHHHHHHHTTCSEEEECCCCTTSC
T ss_pred             HHHHHHHHHhhhhheeeeecCCcc
Confidence            344444455789999988765443

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.07  E-value=0.014  Score=38.84  Aligned_cols=35  Identities=17%  Similarity=0.134  Sum_probs=31.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .|+++|.|| |-+|..+|..|++.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            378999998 89999999999999999999988654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0073  Score=42.78  Aligned_cols=39  Identities=26%  Similarity=0.494  Sum_probs=35.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      |+.||+++|.|- |-+|+.+|+.|...|++|+++..++-+
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            578999999986 589999999999999999999987644

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.88  E-value=0.0057  Score=43.83  Aligned_cols=80  Identities=20%  Similarity=0.194  Sum_probs=51.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCC--CCHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDV--TSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl--s~~~~~~~~~~~~~~~~~~i   79 (254)
                      ++||.++|.|-|.=+|+=++..|+++|++|+.+.++........... .-......|+  -..+.+++...       ..
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lk~~~~-------~a   98 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL-KLNKHHVEDLGEYSEDLLKKCSL-------DS   98 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS-SCCCCEEEEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccce-eeeeeccccccccchhHHhhccc-------cC
Confidence            57999999999999999999999999999998876532210000000 0001111121  23455555555       56


Q ss_pred             cEEEeCCccC
Q psy12833         80 DVNVNCAGIS   89 (254)
Q Consensus        80 d~li~~ag~~   89 (254)
                      |++|..+|..
T Consensus        99 DIvIsavG~p  108 (171)
T d1edza1          99 DVVITGVPSE  108 (171)
T ss_dssp             SEEEECCCCT
T ss_pred             CEEEEccCCC
Confidence            9999888864

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.86  E-value=0.033  Score=40.75  Aligned_cols=37  Identities=19%  Similarity=0.281  Sum_probs=33.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      +.||++.|.|- |.||+.+++.|..-|++|+..++...
T Consensus        41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            57899999997 89999999999999999999887654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.85  E-value=0.016  Score=42.30  Aligned_cols=37  Identities=24%  Similarity=0.195  Sum_probs=33.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      +.||++.|.|. |.||+.+++.|...|++|+..++...
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            57899999987 89999999999999999999888654

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=95.83  E-value=0.033  Score=36.98  Aligned_cols=82  Identities=18%  Similarity=0.076  Sum_probs=58.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ||++||.--..-+-..+...|.+.|++|+..+.+..++-+..++....+.+...++-+. +=-++++++++....+-+++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~~mp~~-~G~e~~~~ir~~~~~~pvi~   79 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEM-NGIDAIKEIMKIDPNAKIIV   79 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGG-CHHHHHHHHHHHCTTCCEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEecCCCCC-CHHHHHHHHHHhCCCCcEEE
Confidence            78999999999999999999999999998767666555555555444444444444443 34467777777777777776


Q ss_pred             eCC
Q psy12833         84 NCA   86 (254)
Q Consensus        84 ~~a   86 (254)
                      ..+
T Consensus        80 ls~   82 (118)
T d1u0sy_          80 CSA   82 (118)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.81  E-value=0.012  Score=39.51  Aligned_cols=35  Identities=17%  Similarity=0.212  Sum_probs=31.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .|+++|.|| |-||..+|..|++.|.+|.++.|+..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            378999998 89999999999999999999988654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.80  E-value=0.0071  Score=42.75  Aligned_cols=36  Identities=17%  Similarity=0.027  Sum_probs=32.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE   42 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~   42 (254)
                      +++|.|+ |.+|..++..|++.|++|.+++|+.+..+
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            6889998 99999999999999999999999877544

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.80  E-value=0.019  Score=38.18  Aligned_cols=34  Identities=18%  Similarity=0.106  Sum_probs=30.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      |+++|.|| |-+|..+|..|.+.|.+|.++.|...
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            67888887 89999999999999999999998754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.021  Score=38.50  Aligned_cols=34  Identities=9%  Similarity=0.048  Sum_probs=30.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      |+++|.|| |-||..+|..|++.|.+|+++.|+..
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            78999998 68999999999999999999999754

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.65  E-value=0.014  Score=42.20  Aligned_cols=37  Identities=16%  Similarity=0.128  Sum_probs=33.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      +.||++.|.|. |.||+.+++.+...|++|+..+|+..
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            67999999998 56999999999999999999998754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.63  E-value=0.019  Score=38.29  Aligned_cols=35  Identities=11%  Similarity=-0.007  Sum_probs=31.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .|+++|.|| |-+|.++|..|++.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            478899988 89999999999999999999998653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.63  E-value=0.038  Score=36.93  Aligned_cols=37  Identities=19%  Similarity=0.181  Sum_probs=32.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      ++++++|.|| |.+|.++|..|+++|.+|.++.+...-
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            4688999988 999999999999999999999987643

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.58  E-value=0.016  Score=40.71  Aligned_cols=24  Identities=25%  Similarity=0.239  Sum_probs=21.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC
Q psy12833          5 VVGLVTGGASGLGKATVERIVREG   28 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g   28 (254)
                      -++.|+||+|.+|.+++..|+..+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHH
Confidence            479999999999999999998654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.55  E-value=0.0063  Score=45.84  Aligned_cols=47  Identities=26%  Similarity=0.409  Sum_probs=40.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG   49 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   49 (254)
                      |+||+++|-|- |.+|..+++.|.+.|++|+.++.+...++....+.+
T Consensus        37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g   83 (230)
T d1leha1          37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG   83 (230)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC
Confidence            67899988875 889999999999999999999988877777776654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.01  Score=45.15  Aligned_cols=74  Identities=19%  Similarity=0.198  Sum_probs=46.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++++|+|.|+ ||+|..++..|++.|. ++++++.+.-+..++.+    ++-+-+-|+..+. ++.+.+.+.+..+.+.+
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~R----Q~l~~~~diG~~K-~~~a~~~l~~~np~~~i  102 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQR----QTLHSDATVGQPK-VESARDALTRINPHIAI  102 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGT----CTTCCGGGTTSBH-HHHHHHHHHHHCTTSEE
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhh----hccccHhhcCchH-HHHHHHHHHHhhcccch
Confidence            5689999996 8999999999999997 78899887544433322    1222233444332 34444444444444444


Q ss_pred             E
Q psy12833         82 N   82 (254)
Q Consensus        82 l   82 (254)
                      .
T Consensus       103 ~  103 (247)
T d1jw9b_         103 T  103 (247)
T ss_dssp             E
T ss_pred             h
Confidence            3

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.44  E-value=0.0066  Score=44.35  Aligned_cols=42  Identities=17%  Similarity=0.218  Sum_probs=36.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE   47 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~   47 (254)
                      +++.|.|| |-.|.++|..|++.|++|.+.+|+++..+.+.+.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            57889998 6799999999999999999999998877766543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.39  E-value=0.034  Score=36.70  Aligned_cols=35  Identities=17%  Similarity=0.145  Sum_probs=30.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .|+++|.|| |.+|..+|..|++.|.+|.++.|...
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            378888887 99999999999999999999988654

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.33  E-value=0.076  Score=33.32  Aligned_cols=68  Identities=16%  Similarity=0.193  Sum_probs=46.0

Q ss_pred             EEEEeCCCChHHH-HHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGK-ATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~-a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++-+.|- +|+|- ++|+.|.++|+.|...|+......+..++.+.++. ..-|.++.              ...|.+|+
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~-~gh~~~~i--------------~~~d~vV~   66 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIF-VPHSADNW--------------YDPDLVIK   66 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEE-SSCCTTSC--------------CCCSEEEE
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEE-eeeccccc--------------CCCCEEEE
Confidence            4566654 56664 78999999999999999987655555555554332 22233321              36899999


Q ss_pred             CCccC
Q psy12833         85 CAGIS   89 (254)
Q Consensus        85 ~ag~~   89 (254)
                      ..++.
T Consensus        67 SsAI~   71 (89)
T d1j6ua1          67 TPAVR   71 (89)
T ss_dssp             CTTCC
T ss_pred             ecCcC
Confidence            98874

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=95.33  E-value=0.44  Score=37.18  Aligned_cols=76  Identities=12%  Similarity=0.042  Sum_probs=52.5

Q ss_pred             CCcEEEEeCC-CChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGG-ASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         3 ~~~~~lItGa-s~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +|++||=..+ +|+++.+    .++.|+ .|+.++.+...++...+..      ..++.+++.|.-      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            5888887775 5555533    345677 6999999988777666543      246788998862      34555555


Q ss_pred             HcCCCcEEEeCCcc
Q psy12833         75 SFGKLDVNVNCAGI   88 (254)
Q Consensus        75 ~~~~id~li~~ag~   88 (254)
                      ...++|+||.....
T Consensus       214 ~~~~fD~Ii~DPP~  227 (317)
T d2b78a2         214 HHLTYDIIIIDPPS  227 (317)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             hcCCCCEEEEcChh
Confidence            55689999998654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.20  E-value=0.033  Score=40.24  Aligned_cols=39  Identities=28%  Similarity=0.253  Sum_probs=33.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchh
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEG   41 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~   41 (254)
                      +.||++.|.|. |.||+++++.+..-|++|+..++.....
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~   80 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPA   80 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHH
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChh
Confidence            56899999985 9999999999999999999998876543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.17  E-value=0.021  Score=38.32  Aligned_cols=36  Identities=19%  Similarity=0.282  Sum_probs=31.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      ++|+++|.|| |.+|..+|..|++.|.+|+++.+...
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            3678888877 89999999999999999999988653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.16  E-value=0.018  Score=40.58  Aligned_cols=39  Identities=18%  Similarity=0.370  Sum_probs=35.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          1 MLKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      |+.||+++|.|= |-+|+.+|++|...|++|+++..++-.
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            689999999987 789999999999999999999887644

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.10  E-value=0.018  Score=43.30  Aligned_cols=35  Identities=17%  Similarity=0.138  Sum_probs=31.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      ..|+|+|.|| |-.|.+.|..|+++|++|.++.|+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3468999998 8999999999999999999999864

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.08  E-value=0.042  Score=39.81  Aligned_cols=37  Identities=14%  Similarity=0.079  Sum_probs=32.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      ++++++.|.|. |.||+++++.|...|.+|+..++...
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          42 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             ccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            56899999996 89999999999999999999998644

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.07  E-value=0.027  Score=37.77  Aligned_cols=60  Identities=12%  Similarity=-0.062  Sum_probs=42.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      ++++|.|| |-||.++|..|.+.|.+|.++.|++ .+.                -.|++-.+.+.+.+.+.  ++++..+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~-~l~----------------~~D~~~~~~l~~~l~~~--Gv~i~~~   80 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI-LLR----------------GFDQDMANKIGEHMEEH--GIKFIRQ   80 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS-SST----------------TSCHHHHHHHHHHHHHT--TEEEEES
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEech-hhc----------------cCCHHHHHHHHHHHHHC--CCEEEEC
Confidence            56888887 8999999999999999999998752 221                12566555555555554  5776443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.00  E-value=0.029  Score=37.61  Aligned_cols=36  Identities=17%  Similarity=0.130  Sum_probs=31.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      .|.++|.|| |-||..+|..|.+.|.+|.++.|+..-
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            468899988 899999999999999999999987644

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.97  E-value=0.054  Score=35.87  Aligned_cols=36  Identities=22%  Similarity=0.147  Sum_probs=32.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .+|.++|.|| |-+|..+|..|++.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4688999887 89999999999999999999998654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.88  E-value=0.047  Score=37.09  Aligned_cols=37  Identities=19%  Similarity=0.210  Sum_probs=32.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      ++|+++|.|| |-+|.++|..|.+.|.+|.++.+...-
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            4688999987 999999999999999999999986543

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.82  E-value=0.033  Score=41.94  Aligned_cols=71  Identities=15%  Similarity=0.060  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++++|=.|+++|.   ++..|+++|.+|+.++.+++-++...+.   .+.++.++..|+.+.+           ..+++
T Consensus        37 ~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~~f  102 (246)
T d1y8ca_          37 VFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INRKF  102 (246)
T ss_dssp             CTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSCCE
T ss_pred             CCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------ccccc
Confidence            46789999988775   6778899999999999998876655443   3668999999886532           12478


Q ss_pred             cEEEeCCc
Q psy12833         80 DVNVNCAG   87 (254)
Q Consensus        80 d~li~~ag   87 (254)
                      |++++..+
T Consensus       103 D~i~~~~~  110 (246)
T d1y8ca_         103 DLITCCLD  110 (246)
T ss_dssp             EEEEECTT
T ss_pred             cccceeee
Confidence            98886543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.78  E-value=0.065  Score=35.53  Aligned_cols=35  Identities=17%  Similarity=0.032  Sum_probs=31.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .++++|.|| |-||..+|..|++.|.+|.++.++..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            478999998 89999999999999999999988654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.76  E-value=0.024  Score=41.54  Aligned_cols=70  Identities=20%  Similarity=0.196  Sum_probs=50.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +.||+||=.|+++|+   ++..++..|+ +|+.++.++..++...+ .-.++.++.+|+.+.             .+++|
T Consensus        47 l~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~-N~~~~~~~~~D~~~l-------------~~~fD  109 (197)
T d1ne2a_          47 IGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKR-NCGGVNFMVADVSEI-------------SGKYD  109 (197)
T ss_dssp             SBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHH-HCTTSEEEECCGGGC-------------CCCEE
T ss_pred             CCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHH-ccccccEEEEehhhc-------------CCcce
Confidence            468999999987763   3334667775 69999998776665444 346789999998542             25899


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      ++|.|...
T Consensus       110 ~Vi~NPPf  117 (197)
T d1ne2a_         110 TWIMNPPF  117 (197)
T ss_dssp             EEEECCCC
T ss_pred             EEEeCccc
Confidence            99998653

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.74  E-value=0.029  Score=40.27  Aligned_cols=58  Identities=19%  Similarity=0.129  Sum_probs=45.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----------------CCCceEEecCCCCHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----------------GPDVKFAPVDVTSEE   63 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dls~~~   63 (254)
                      +|++||..|++.|   ..+..|+++|++|+.++.++..++...+..                +..+.++.+|..+..
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            5789999999777   366688999999999999988887776654                234567788876643

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.73  E-value=0.065  Score=38.87  Aligned_cols=38  Identities=16%  Similarity=0.070  Sum_probs=33.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      ++||++.|.|. |.||+.+++.+...|.+|+..++....
T Consensus        45 l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          45 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             ecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            46899999987 899999999999999999998876553

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.57  E-value=0.2  Score=34.62  Aligned_cols=79  Identities=9%  Similarity=0.062  Sum_probs=55.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC---------CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG---------PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +-+.|- |-+|..++++|.+.|+.+ ...|+.++.++..++.+         .....+-..+.+.+.+......+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            455565 889999999999988765 57888887777666541         1233444556677888888887777665


Q ss_pred             CCcEEEeCCc
Q psy12833         78 KLDVNVNCAG   87 (254)
Q Consensus        78 ~id~li~~ag   87 (254)
                      +-.++|.+..
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            6666666654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.42  E-value=0.5  Score=33.11  Aligned_cols=75  Identities=17%  Similarity=0.252  Sum_probs=42.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHH-c----CCEEEEeeCCCchhHHHHHHh-------CCCceEEecCCCCHHHHHHHHHH
Q psy12833          4 GVVGLVTGGASGLGKATVERIVR-E----GGRVVLCDLPTSEGESVAKEL-------GPDVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~-~----g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      ..++.|.||++.....++..+.. .    +.++++.+.++++++.....+       +.........  |   .++.++ 
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d---~~eal~-   76 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--D---PEEAFT-   76 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--C---HHHHHS-
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--C---hhhccC-
Confidence            44677778765322223333333 2    248999999988776433322       3444433331  2   122333 


Q ss_pred             HHHHcCCCcEEEeCCccCC
Q psy12833         72 CKDSFGKLDVNVNCAGISC   90 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~   90 (254)
                            .-|++|+.+|...
T Consensus        77 ------~AD~Vvitag~~~   89 (167)
T d1u8xx1          77 ------DVDFVMAHIRVGK   89 (167)
T ss_dssp             ------SCSEEEECCCTTH
T ss_pred             ------CCCEEEECCCcCC
Confidence                  6899999998753

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.39  E-value=0.19  Score=39.39  Aligned_cols=78  Identities=13%  Similarity=0.059  Sum_probs=53.1

Q ss_pred             CCCcEEEEeCCC-ChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---C-CCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGA-SGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---G-PDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas-~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      .+|++||=.++. |+++.+    ++..+.+|+.++.+...++...+..   + .++.++..|..+      +.+......
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTT
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhh
Confidence            467888888864 555443    3455779999999988877766543   3 467888888633      334444444


Q ss_pred             CCCcEEEeCCccC
Q psy12833         77 GKLDVNVNCAGIS   89 (254)
Q Consensus        77 ~~id~li~~ag~~   89 (254)
                      .++|+||.+....
T Consensus       214 ~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         214 ERFDLVVLDPPAF  226 (318)
T ss_dssp             CCEEEEEECCCCS
T ss_pred             cCCCEEEEcCCcc
Confidence            6899999987543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=94.29  E-value=0.06  Score=37.94  Aligned_cols=79  Identities=14%  Similarity=0.235  Sum_probs=53.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEE-EeeCCCch-h-HHH---H-------------HHhCCCceEEecCCCCHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVRE-GGRVV-LCDLPTSE-G-ESV---A-------------KELGPDVKFAPVDVTSEEDV   65 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~-g~~v~-~~~r~~~~-~-~~~---~-------------~~~~~~~~~~~~Dls~~~~~   65 (254)
                      ++.|.|++|.+|+++++...++ +++++ .++|.... . ++.   .             ++.-..+. +..|+|.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHHH
Confidence            6899999999999999988765 56654 34443211 0 000   0             00011122 55899999999


Q ss_pred             HHHHHHHHHHcCCCcEEEeCCc
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCAG   87 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~ag   87 (254)
                      .+.++.+.+.  ++.+|+-..|
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG  104 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTG  104 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCC
T ss_pred             HHHHHHHHhc--cceeEEecCC
Confidence            9999988876  7888887666

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.27  E-value=0.077  Score=39.74  Aligned_cols=70  Identities=16%  Similarity=0.038  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      +++++|=.|+++|   .++..|+++|++|+.++.++.-++...+..   +.++.+++.|+.+.+.           -+..
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence            3578999998776   345668899999999999987666555443   5679999999866431           1368


Q ss_pred             cEEEeCC
Q psy12833         80 DVNVNCA   86 (254)
Q Consensus        80 d~li~~a   86 (254)
                      |.+++.-
T Consensus       107 D~I~~~~  113 (251)
T d1wzna1         107 DAVTMFF  113 (251)
T ss_dssp             EEEEECS
T ss_pred             chHhhhh
Confidence            9887653

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.25  E-value=0.24  Score=35.98  Aligned_cols=70  Identities=17%  Similarity=0.210  Sum_probs=50.2

Q ss_pred             CCCcEEEEeCCCCh-HHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASG-LGKATVERIVREGG-RVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~g-iG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      ++|+++|=.|+++| +|.    .++.+|+ +|+.++.++..++...+.+   +.+..++.+|..+.             .
T Consensus        45 l~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------~  107 (201)
T d1wy7a1          45 IEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------N  107 (201)
T ss_dssp             STTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------C
T ss_pred             CCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------C
Confidence            47889999997655 443    3456776 8999999987766665533   66778888886432             3


Q ss_pred             CCCcEEEeCCcc
Q psy12833         77 GKLDVNVNCAGI   88 (254)
Q Consensus        77 ~~id~li~~ag~   88 (254)
                      +++|++|.|...
T Consensus       108 ~~fD~Vi~nPP~  119 (201)
T d1wy7a1         108 SRVDIVIMNPPF  119 (201)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CcCcEEEEcCcc
Confidence            589999998764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.25  E-value=0.036  Score=37.05  Aligned_cols=34  Identities=18%  Similarity=0.230  Sum_probs=30.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      +|.++|.|| |.+|.++|..|++.|.+|+++.|++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            467888887 9999999999999999999998864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.24  E-value=0.038  Score=39.69  Aligned_cols=37  Identities=22%  Similarity=0.139  Sum_probs=33.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      +.|+++|.|| |.-|.+.|..|+++|++|+++.++..-
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            5689999998 889999999999999999999987653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.22  E-value=0.24  Score=35.48  Aligned_cols=37  Identities=16%  Similarity=0.064  Sum_probs=32.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      +.++++.|.|. |.||+.+++.+...|++|+..++...
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          42 ARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence            46889999965 99999999999999999999988643

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.22  E-value=0.036  Score=38.42  Aligned_cols=37  Identities=19%  Similarity=0.091  Sum_probs=28.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC----CEEEEeeCCCchh
Q psy12833          5 VVGLVTGGASGLGKATVERIVREG----GRVVLCDLPTSEG   41 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g----~~v~~~~r~~~~~   41 (254)
                      |++-|.||||-.|+.+.+.|.++.    .+++..++++...
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g   42 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ   42 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccc
Confidence            478899999999999999877653    3677677665543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.16  E-value=0.03  Score=42.83  Aligned_cols=34  Identities=18%  Similarity=0.107  Sum_probs=30.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      +|+|+|.|| |.-|.+.|.+|+++|++|.++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999998 7788999999999999999998754

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.15  E-value=0.025  Score=40.73  Aligned_cols=35  Identities=9%  Similarity=0.050  Sum_probs=31.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~~   39 (254)
                      +|+|+|.|| |..|...|..|+++|++ |+++.|+..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            689999998 89999999999999995 988888654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.01  E-value=0.069  Score=37.09  Aligned_cols=40  Identities=10%  Similarity=0.076  Sum_probs=31.6

Q ss_pred             CcEEEEeC-CCChHHHHHHHHHHHcCCEEEEeeCCCchhHH
Q psy12833          4 GVVGLVTG-GASGLGKATVERIVREGGRVVLCDLPTSEGES   43 (254)
Q Consensus         4 ~~~~lItG-as~giG~a~a~~l~~~g~~v~~~~r~~~~~~~   43 (254)
                      ++.++|.+ +++-||.++|..|+++|++|.++.+...-+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~~   79 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANYM   79 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTHH
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccccc
Confidence            45666654 56899999999999999999999987644433

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.93  E-value=0.26  Score=33.55  Aligned_cols=83  Identities=7%  Similarity=-0.065  Sum_probs=59.4

Q ss_pred             CCcEEEEeCCC---ChHHHHHHHHHHHcCCEEEEeeCCCchhH-----HHHHHhCCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGA---SGLGKATVERIVREGGRVVLCDLPTSEGE-----SVAKELGPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         3 ~~~~~lItGas---~giG~a~a~~l~~~g~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      +-|++.|.|+|   +..|..+.+.|.+.|++|+.+..+.....     ....++...+..+..- ..++.+.++++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~-vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLF-VKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEEC-SCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEE-eCHHHHHHHHHHHHH
Confidence            35899999998   47999999999999999999877644221     1112233445554443 368889999999888


Q ss_pred             HcCCCcEEEeCCcc
Q psy12833         75 SFGKLDVNVNCAGI   88 (254)
Q Consensus        75 ~~~~id~li~~ag~   88 (254)
                      .  ++..++...|.
T Consensus        97 ~--g~k~v~~~~G~  108 (139)
T d2d59a1          97 K--GAKVVWFQYNT  108 (139)
T ss_dssp             H--TCSEEEECTTC
T ss_pred             h--CCCEEEEeccc
Confidence            6  56778777764

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.87  E-value=0.14  Score=37.37  Aligned_cols=71  Identities=14%  Similarity=-0.073  Sum_probs=50.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +.+||=.|+++|.   ++..|++.|++|+.++.+...++...+.   .+.++.++..|..+..          ...+..|
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~----------~~~~~fD  104 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------FEDKTFD  104 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC----------SCTTCEE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc----------ccCcCce
Confidence            4578999988776   5667889999999999987776655543   3566788888876532          1113689


Q ss_pred             EEEeCCc
Q psy12833         81 VNVNCAG   87 (254)
Q Consensus        81 ~li~~ag   87 (254)
                      ++++...
T Consensus       105 ~I~~~~~  111 (226)
T d1ve3a1         105 YVIFIDS  111 (226)
T ss_dssp             EEEEESC
T ss_pred             EEEEecc
Confidence            8887643

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.041  Score=41.03  Aligned_cols=56  Identities=9%  Similarity=0.079  Sum_probs=43.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---------------------CCCceEEecCCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---------------------GPDVKFAPVDVTS   61 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---------------------~~~~~~~~~Dls~   61 (254)
                      +|++||..|++.|   ..+..|+++|++|+.++-++..++...++.                     +.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            4679999998776   457778999999999999998887766543                     2457778888653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.86  E-value=0.062  Score=36.04  Aligned_cols=35  Identities=17%  Similarity=0.165  Sum_probs=31.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .+.++|.|| |-||..+|..|.+.|.+|+++.+...
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            478999998 89999999999999999999988654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.79  E-value=0.034  Score=39.94  Aligned_cols=33  Identities=18%  Similarity=0.287  Sum_probs=29.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      ++.|.|+ |..|.++|..|++.|.+|.+.+|+.+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            5778887 89999999999999999999998544

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.028  Score=46.27  Aligned_cols=41  Identities=24%  Similarity=0.349  Sum_probs=33.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHH
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGES   43 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~   43 (254)
                      |++.+|||.|+ ||+|..+++.|+..|. ++.+++.+.-+..+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sN   76 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSN   76 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGG
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhh
Confidence            34568999999 8899999999999998 78999887544333

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.49  E-value=0.052  Score=39.69  Aligned_cols=37  Identities=19%  Similarity=0.188  Sum_probs=32.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      +.||++.|.|. |.||+.+++.|..-|++|+..++...
T Consensus        43 l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          43 LGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            46899999997 88999999999999999999988654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.31  E-value=0.14  Score=36.55  Aligned_cols=72  Identities=13%  Similarity=0.089  Sum_probs=43.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      +|-|.||||-.|..+.+.|.++.. ++..+..+....+.+.+-......-......+.+.+   .+       .+|+++.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~---~~-------~~dvvf~   72 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKV---SK-------NCDVLFT   72 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHH---HH-------HCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhHh---cc-------ccceEEE
Confidence            699999999999999999998754 666555544444444322111111112333344322   22       4799888


Q ss_pred             CCc
Q psy12833         85 CAG   87 (254)
Q Consensus        85 ~ag   87 (254)
                      +..
T Consensus        73 a~p   75 (176)
T d1vkna1          73 ALP   75 (176)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            765

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.22  E-value=0.093  Score=36.29  Aligned_cols=39  Identities=15%  Similarity=0.026  Sum_probs=31.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK   46 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~   46 (254)
                      +-|.| .|-+|.++++.|.++|++|+..+++.+.......
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~   41 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA   41 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh
Confidence            45555 4999999999999999999999888776554443

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.13  E-value=0.37  Score=37.68  Aligned_cols=77  Identities=16%  Similarity=0.028  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCC-ChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGA-SGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         3 ~~~~~lItGas-~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +|++||=.++. |+++.++    ++.|+ +|+.++.+++.++...+.+     ..+++++..|..      +.+..+...
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            47888888864 5555543    45676 7999999988777665543     245777777753      234444444


Q ss_pred             cCCCcEEEeCCccC
Q psy12833         76 FGKLDVNVNCAGIS   89 (254)
Q Consensus        76 ~~~id~li~~ag~~   89 (254)
                      ..++|+||.+....
T Consensus       215 ~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         215 GEKFDIVVLDPPAF  228 (324)
T ss_dssp             TCCEEEEEECCCCS
T ss_pred             cCCCCchhcCCccc
Confidence            46899999987643

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.09  E-value=0.12  Score=34.54  Aligned_cols=76  Identities=18%  Similarity=0.160  Sum_probs=53.1

Q ss_pred             CcEEEEeCCCC-hH---------HHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          4 GVVGLVTGGAS-GL---------GKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         4 ~~~~lItGas~-gi---------G~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      -|++||.|++. -|         +.+.+++|.++|++++++..|++....-. ...+++.|-+.   +.+++.+.++.- 
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~-d~aD~lYfePl---t~e~v~~Ii~~E-   81 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP-EMADATYIEPI---HWEVVRKIIEKE-   81 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG-GGSSEEECSCC---CHHHHHHHHHHH-
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh-hhcceeeeecC---CHHHHHHHHHHh-
Confidence            48999999864 33         35667788999999999999887643321 23455555555   467777777654 


Q ss_pred             HHcCCCcEEEeCCcc
Q psy12833         74 DSFGKLDVNVNCAGI   88 (254)
Q Consensus        74 ~~~~~id~li~~ag~   88 (254)
                          ++|.++...|.
T Consensus        82 ----~pd~il~~~GG   92 (127)
T d1a9xa3          82 ----RPDAVLPTMGG   92 (127)
T ss_dssp             ----CCSEEECSSSH
T ss_pred             ----CcCCeEEEeee
Confidence                89999877663

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.05  E-value=0.085  Score=38.24  Aligned_cols=74  Identities=20%  Similarity=0.216  Sum_probs=55.4

Q ss_pred             EeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          9 VTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         9 ItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      +|-|+||...++.+.+ . +.+|+.++++++.++...+.+   +.++.++..+.++.+.+   +....  .+++|.++..
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~--~~~vdgIl~D  102 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG--IEKVDGILMD  102 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT--CSCEEEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC--CCCcceeeec
Confidence            4778888988888876 3 578999999998887776654   67899999988775432   22211  2589999999


Q ss_pred             CccC
Q psy12833         86 AGIS   89 (254)
Q Consensus        86 ag~~   89 (254)
                      .|++
T Consensus       103 lGvS  106 (192)
T d1m6ya2         103 LGVS  106 (192)
T ss_dssp             CSCC
T ss_pred             cchh
Confidence            8874

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.85  E-value=0.52  Score=32.41  Aligned_cols=50  Identities=16%  Similarity=0.158  Sum_probs=36.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc--CCEEEE--eeCCCchhHHHHHHhCCCceE
Q psy12833          5 VVGLVTGGASGLGKATVERIVRE--GGRVVL--CDLPTSEGESVAKELGPDVKF   54 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~--g~~v~~--~~r~~~~~~~~~~~~~~~~~~   54 (254)
                      |++.|.|+||-||......+.+.  .++|+.  +.++.+.+.+...++..+..+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~   55 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAV   55 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccc
Confidence            68999999999999998887766  467764  445566677777777654433

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.84  E-value=0.085  Score=39.54  Aligned_cols=35  Identities=20%  Similarity=0.081  Sum_probs=30.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .++|+|.|| |--|..+|..|+++|.+|+++.|+..
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            578999998 78889999999999999999998653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.81  E-value=0.085  Score=36.96  Aligned_cols=35  Identities=26%  Similarity=0.256  Sum_probs=30.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--EEEEeeCCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG--RVVLCDLPT   38 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~--~v~~~~r~~   38 (254)
                      .||+++|.|| |-.|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999999 7789999999999874  788887765

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.74  E-value=0.076  Score=41.62  Aligned_cols=36  Identities=19%  Similarity=0.220  Sum_probs=31.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      ++|+++|.|| |--|..+|..|+++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4789999998 77889999999999999999987654

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=92.72  E-value=0.085  Score=41.20  Aligned_cols=43  Identities=16%  Similarity=0.213  Sum_probs=27.5

Q ss_pred             cEEEEeCCCCh-H---HHHHHHHHHHcCCEEEEeeCCCchhHHHHHH
Q psy12833          5 VVGLVTGGASG-L---GKATVERIVREGGRVVLCDLPTSEGESVAKE   47 (254)
Q Consensus         5 ~~~lItGas~g-i---G~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~   47 (254)
                      |+++|++|+.| -   ..+++++|.++|++|..++.......+...+
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~   47 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK   47 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccc
Confidence            56777665444 2   3478999999999998776543332333333

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.60  E-value=0.1  Score=38.80  Aligned_cols=36  Identities=19%  Similarity=0.235  Sum_probs=31.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .+|+++|.|| |..|...|.+|+++|++|+++.++..
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            4689999998 77799999999999999999987654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.51  E-value=0.21  Score=38.77  Aligned_cols=71  Identities=17%  Similarity=0.177  Sum_probs=48.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhH--HHHHH--hCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGE--SVAKE--LGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~--~~~~~--~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      .+||+||-.|++.|+   ++..+++.|+ +|+.++.++....  +...+  ...++.++..|+.+...          ..
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~~  100 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------PV  100 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------SC
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------cc
Confidence            478999999998876   5666778887 7999998765321  11112  25678899988876421          12


Q ss_pred             CCCcEEEeC
Q psy12833         77 GKLDVNVNC   85 (254)
Q Consensus        77 ~~id~li~~   85 (254)
                      .++|+++..
T Consensus       101 ~~~D~Ivse  109 (311)
T d2fyta1         101 EKVDVIISE  109 (311)
T ss_dssp             SCEEEEEEC
T ss_pred             ccceEEEEe
Confidence            478998875

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.40  E-value=0.41  Score=37.17  Aligned_cols=76  Identities=11%  Similarity=-0.012  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCCC-hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGAS-GLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         3 ~~~~~lItGas~-giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++++||=..+.+ +++.+    +++.|++|+.++.+...++...+..      ..++.++..|+.      ++++...+.
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            577888777654 44433    4567999999999988777666533      235788888763      345555555


Q ss_pred             cCCCcEEEeCCcc
Q psy12833         76 FGKLDVNVNCAGI   88 (254)
Q Consensus        76 ~~~id~li~~ag~   88 (254)
                      ..+.|+||++.-.
T Consensus       202 ~~~fD~IilDPP~  214 (309)
T d2igta1         202 GSTYDIILTDPPK  214 (309)
T ss_dssp             TCCBSEEEECCCS
T ss_pred             CCCCCEEEECCCc
Confidence            5689999998653

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.38  E-value=0.084  Score=40.84  Aligned_cols=33  Identities=18%  Similarity=0.198  Sum_probs=29.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCD   35 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~   35 (254)
                      ++||+++|-|- |-+|..+++.|.+.|++|+.++
T Consensus        34 L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          34 FGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            57899988886 8999999999999999998765

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=92.18  E-value=0.42  Score=36.03  Aligned_cols=70  Identities=21%  Similarity=0.221  Sum_probs=49.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      .+|+++|=.|+++|+   ++..+++.|++|+.++.++..++...+..   +.+..++..|+.+      .     ...++
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~-----~~~~~  184 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------A-----LPFGP  184 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------H-----GGGCC
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------c-----ccccc
Confidence            368899999988876   23356778999999999998877666433   5567777776421      1     12257


Q ss_pred             CcEEEeC
Q psy12833         79 LDVNVNC   85 (254)
Q Consensus        79 id~li~~   85 (254)
                      .|+++.|
T Consensus       185 fD~V~an  191 (254)
T d2nxca1         185 FDLLVAN  191 (254)
T ss_dssp             EEEEEEE
T ss_pred             cchhhhc
Confidence            8999876

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=92.11  E-value=0.58  Score=30.55  Aligned_cols=81  Identities=14%  Similarity=0.098  Sum_probs=54.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ||++||.--...+-..+.+.|.+.|++|..+. +...+-+..++....+.+....+-+.+. -++++++++....+-+++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~-~g~eal~~~~~~~~dlillD~~mP~~~G-~el~~~lr~~~~~~pvi~   78 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAA-NGLQALDIVTKERPDLVLLDMKIPGMDG-IEILKRMKVIDENIRVII   78 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHHCCSEEEEESCCTTCCH-HHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeC-CHHHHHHHHHhCCCCEEEEeccCCCCCH-HHHHHHHHHhCCCCcEEE
Confidence            68999999999999999999999999998654 3434333444444444444444444443 356777877766677776


Q ss_pred             eCC
Q psy12833         84 NCA   86 (254)
Q Consensus        84 ~~a   86 (254)
                      ..+
T Consensus        79 lt~   81 (119)
T d1peya_          79 MTA   81 (119)
T ss_dssp             EES
T ss_pred             Eec
Confidence            654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.00  E-value=0.19  Score=36.80  Aligned_cols=76  Identities=28%  Similarity=0.325  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +|.+||-.|+++|--.++..++...+.+|+.++.+++..+...+.+    -.++.++..|..+.          ....++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~----------~~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG----------VPEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc----------cccccc
Confidence            4779999998887766666556666679999999887766665544    34667777775431          112247


Q ss_pred             CcEEEeCCcc
Q psy12833         79 LDVNVNCAGI   88 (254)
Q Consensus        79 id~li~~ag~   88 (254)
                      +|+++.+++.
T Consensus       145 fD~I~~~~~~  154 (213)
T d1dl5a1         145 YDVIFVTVGV  154 (213)
T ss_dssp             EEEEEECSBB
T ss_pred             hhhhhhhccH
Confidence            8999887764

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.81  E-value=0.33  Score=31.65  Aligned_cols=35  Identities=20%  Similarity=0.144  Sum_probs=28.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHH---cCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVR---EGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~---~g~~v~~~~r~~~   39 (254)
                      .|+++|.|| |.+|-++|..|.+   .|.+|.++.|...
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            478999998 8999999986654   4889999988654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.75  E-value=0.28  Score=32.09  Aligned_cols=35  Identities=20%  Similarity=0.174  Sum_probs=27.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHH---cCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIVR---EGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~---~g~~v~~~~r~~~   39 (254)
                      .++++|.|| |.+|..+|..|.+   +|.+|+++.|...
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            478999998 9999999976554   4568999988643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.73  E-value=0.11  Score=40.18  Aligned_cols=34  Identities=12%  Similarity=0.147  Sum_probs=30.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      .|+|+|.|| |--|...|..|+++|++|.++.++.
T Consensus        30 pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          30 PKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            478999998 6779999999999999999998754

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.66  E-value=0.42  Score=32.79  Aligned_cols=72  Identities=17%  Similarity=0.146  Sum_probs=47.7

Q ss_pred             CCCcEEEEeCCCC-hHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGAS-GLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         2 l~~~~~lItGas~-giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      ++|+++|=.|+++ .+|.    +.+++|+ +|+.++.+++..+...+.+     ..++.+++.|..+      +++   .
T Consensus        13 ~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---~   79 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---C   79 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---H
T ss_pred             CCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---c
Confidence            4688888787654 4554    3456786 7999999988766555443     3457888888432      222   2


Q ss_pred             HcCCCcEEEeCC
Q psy12833         75 SFGKLDVNVNCA   86 (254)
Q Consensus        75 ~~~~id~li~~a   86 (254)
                      ...+.|+++.+.
T Consensus        80 ~~~~fDiIf~DP   91 (152)
T d2esra1          80 LTGRFDLVFLDP   91 (152)
T ss_dssp             BCSCEEEEEECC
T ss_pred             cccccceeEech
Confidence            235789998764

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.62  E-value=0.56  Score=34.01  Aligned_cols=82  Identities=11%  Similarity=0.037  Sum_probs=56.0

Q ss_pred             CcEEEEeCCCChHHH-----HHHHHHHHcC-----CEEEEeeCCCchhHHHHHH-----------------hCCCceEEe
Q psy12833          4 GVVGLVTGGASGLGK-----ATVERIVREG-----GRVVLCDLPTSEGESVAKE-----------------LGPDVKFAP   56 (254)
Q Consensus         4 ~~~~lItGas~giG~-----a~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~-----------------~~~~~~~~~   56 (254)
                      .-+.+|.||||.+.+     |+-. |.+.|     .+|+.++|+.-..++..+.                 +-.++.++.
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~-L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWW-LFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHH-HHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CcEEEEECcccHHHHhHHHHHHHH-HHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            457899999999885     3333 44444     5899999976544433332                 235688899


Q ss_pred             cCCCCHHHHHHHHHHHHHHcC--CCcEEEeCC
Q psy12833         57 VDVTSEEDVQKAVLLCKDSFG--KLDVNVNCA   86 (254)
Q Consensus        57 ~Dls~~~~~~~~~~~~~~~~~--~id~li~~a   86 (254)
                      +|++|+++..++-+.+.+...  ..+.+++.|
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            999999999998887766422  334566654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.56  E-value=0.38  Score=34.16  Aligned_cols=71  Identities=18%  Similarity=0.173  Sum_probs=48.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +|.++|=.|+++|   .++..|++.+.+|+.++.++..++...+.+     ..++.++.+|..          +......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            4677787887665   333456677889999999988776665543     368889998741          1222335


Q ss_pred             CCcEEEeCC
Q psy12833         78 KLDVNVNCA   86 (254)
Q Consensus        78 ~id~li~~a   86 (254)
                      .+|.++.+.
T Consensus       100 ~~D~v~~~~  108 (186)
T d1l3ia_         100 DIDIAVVGG  108 (186)
T ss_dssp             CEEEEEESC
T ss_pred             CcCEEEEeC
Confidence            789988764

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.56  E-value=0.71  Score=30.09  Aligned_cols=80  Identities=14%  Similarity=0.075  Sum_probs=54.0

Q ss_pred             cEEEEeCCCC---hHHHHHHHHHHHcCCEEEEeeCCCchhH-----HHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          5 VVGLVTGGAS---GLGKATVERIVREGGRVVLCDLPTSEGE-----SVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         5 ~~~lItGas~---giG~a~a~~l~~~g~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |++.|.|+|.   ..|..+.+.|.+.|++|+.+..+.+...     ....++...+.....- ..++.+.++++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi~-vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFV-VPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEEC-SCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEEE-eCHHHHHHHHHHHHhc-
Confidence            6899999984   6899999999999999998876544321     1112333445544332 3577788888888775 


Q ss_pred             CCCcEEEeCCc
Q psy12833         77 GKLDVNVNCAG   87 (254)
Q Consensus        77 ~~id~li~~ag   87 (254)
                       ++..++...|
T Consensus        80 -g~k~v~~~~g   89 (116)
T d1y81a1          80 -GFKKLWFQPG   89 (116)
T ss_dssp             -TCCEEEECTT
T ss_pred             -CCceEEeccc
Confidence             4666665544

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=91.48  E-value=0.056  Score=39.46  Aligned_cols=31  Identities=26%  Similarity=0.234  Sum_probs=27.1

Q ss_pred             cEEEEeCCCChHHH-----HHHHHHHHcCCEEEEee
Q psy12833          5 VVGLVTGGASGLGK-----ATVERIVREGGRVVLCD   35 (254)
Q Consensus         5 ~~~lItGas~giG~-----a~a~~l~~~g~~v~~~~   35 (254)
                      |+++|||.++|.|+     .++..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999999989997     56778999999999876

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.45  E-value=0.19  Score=37.02  Aligned_cols=75  Identities=23%  Similarity=0.162  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH---hC-CCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LG-PDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +|.+||..|+++|--.++..+|.  |.+|+.+.++++-.+...+.   ++ .++.++..|..+          .....++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~----------g~~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK----------GFPPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG----------CCGGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECcccc----------CCcccCc
Confidence            57789999999998888888776  46799999986655444433   33 678999998753          1123357


Q ss_pred             CcEEEeCCccC
Q psy12833         79 LDVNVNCAGIS   89 (254)
Q Consensus        79 id~li~~ag~~   89 (254)
                      .|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            99998887753

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=91.41  E-value=1.1  Score=31.81  Aligned_cols=70  Identities=13%  Similarity=0.004  Sum_probs=42.7

Q ss_pred             CCCcEEEEeCCCC-------------hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHH
Q psy12833          2 LKGVVGLVTGGAS-------------GLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKA   68 (254)
Q Consensus         2 l~~~~~lItGas~-------------giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~   68 (254)
                      +++||+++.|-|-             |-+..+++.|-..+.+|+-.+.+-.......++                   ..
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~-------------------~~   61 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND-------------------GQ   61 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS-------------------SH
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh-------------------hh
Confidence            4789999999872             345566666655677877666655443332211                   12


Q ss_pred             HHHHHHHcCCCcEEEeCCccCC
Q psy12833         69 VLLCKDSFGKLDVNVNCAGISC   90 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~ag~~~   90 (254)
                      +..+.....+.|++|.+.|...
T Consensus        62 ~~~~~~~~~~~D~vvi~~G~ND   83 (208)
T d2o14a2          62 LEAILKYIKPGDYFMLQLGIND   83 (208)
T ss_dssp             HHHHHTTCCTTCEEEEECCTGG
T ss_pred             HHHHHHhcCCCCEEEEEcCCCc
Confidence            3333444456799998888654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.93  E-value=0.31  Score=32.17  Aligned_cols=77  Identities=17%  Similarity=0.145  Sum_probs=51.4

Q ss_pred             CCcEEEEeCCCC-hH---------HHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGAS-GL---------GKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         3 ~~~~~lItGas~-gi---------G~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      ..|++||.|++. -|         +.+.++.|.+.|++++++..|++...-- ....+++.|-+.   ..+.+.+.++.-
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd-~d~aD~lYfepl---t~e~v~~Ii~~E   78 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD-YDTSDRLYFEPV---TLEDVLEIVRIE   78 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS-TTSSSEEECCCC---SHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC-hhhcCceEEccC---CHHHHHHHHHHh
Confidence            358899999864 33         3567788999999999999987754321 112344555454   456666666543


Q ss_pred             HHHcCCCcEEEeCCcc
Q psy12833         73 KDSFGKLDVNVNCAGI   88 (254)
Q Consensus        73 ~~~~~~id~li~~ag~   88 (254)
                           ++|.++...|.
T Consensus        79 -----~p~~ii~~~GG   89 (121)
T d1a9xa4          79 -----KPKGVIVQYGG   89 (121)
T ss_dssp             -----CCSEEECSSST
T ss_pred             -----CCCEEEeehhh
Confidence                 78888877663

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.90  E-value=0.14  Score=38.72  Aligned_cols=32  Identities=25%  Similarity=0.343  Sum_probs=29.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      -|+|.|| |-.|.++|.+|+++|.+|+++.+..
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3888887 8999999999999999999999865

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=90.79  E-value=0.26  Score=36.49  Aligned_cols=73  Identities=23%  Similarity=0.083  Sum_probs=50.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCCc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLD   80 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id   80 (254)
                      +|.+||-.|+++|--.+   .|++.+.+|+.+.++++..+...+.+  ..++.++..|..+-          ....++.|
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g----------~~~~~pfD  136 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG----------YEEEKPYD  136 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC----------CGGGCCEE
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhc----------chhhhhHH
Confidence            47789999998885444   45556789999998877666554433  35788888887431          11235789


Q ss_pred             EEEeCCcc
Q psy12833         81 VNVNCAGI   88 (254)
Q Consensus        81 ~li~~ag~   88 (254)
                      .++.+++.
T Consensus       137 ~Iiv~~a~  144 (224)
T d1vbfa_         137 RVVVWATA  144 (224)
T ss_dssp             EEEESSBB
T ss_pred             HHHhhcch
Confidence            99887764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.61  E-value=0.17  Score=36.69  Aligned_cols=40  Identities=13%  Similarity=0.165  Sum_probs=32.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAK   46 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~   46 (254)
                      ++.|. |.|-+|..+|..|+++|++|+..+.+.+..+.+.+
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            35666 45999999999999999999999998776665543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.36  E-value=0.26  Score=36.71  Aligned_cols=33  Identities=24%  Similarity=0.251  Sum_probs=27.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHH-cCCEEEEee
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVR-EGGRVVLCD   35 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~-~g~~v~~~~   35 (254)
                      ++|++++|=| .|-+|+.+++.|.+ .|++|+.++
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            5788988776 69999999999975 599988664

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=90.31  E-value=0.12  Score=36.90  Aligned_cols=37  Identities=19%  Similarity=0.053  Sum_probs=31.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      +++.++|.|| |..|...|..+++.|.+|+++.+....
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~~~   40 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGMEKG   40 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSSTT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeeccc
Confidence            4678999998 668999999999999999999875543

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=90.19  E-value=0.65  Score=35.30  Aligned_cols=74  Identities=14%  Similarity=0.130  Sum_probs=48.2

Q ss_pred             cEEEEeCCCCh-HHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          5 VVGLVTGGASG-LGKATVERIVREGGRVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         5 ~~~lItGas~g-iG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      ++++-.|+++| |+.+++ +  ...++|+.++.+++.++-..+..     ..++.++..|+.+.         .....++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            45665565555 555544 2  35789999999988766555432     34566778887643         3334468


Q ss_pred             CcEEEeCCccCC
Q psy12833         79 LDVNVNCAGISC   90 (254)
Q Consensus        79 id~li~~ag~~~   90 (254)
                      +|++|.|.-...
T Consensus       180 fDlIVsNPPYI~  191 (271)
T d1nv8a_         180 IEMILSNPPYVK  191 (271)
T ss_dssp             CCEEEECCCCBC
T ss_pred             ccEEEEcccccC
Confidence            999999987653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.04  E-value=0.19  Score=38.03  Aligned_cols=33  Identities=15%  Similarity=0.260  Sum_probs=29.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCD   35 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~   35 (254)
                      ++|++++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            5789999998 69999999999999999988654

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=89.89  E-value=1  Score=35.00  Aligned_cols=80  Identities=18%  Similarity=0.089  Sum_probs=45.0

Q ss_pred             cEEEEeCCCChH-H--HHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCC----------------CHHHH
Q psy12833          5 VVGLVTGGASGL-G--KATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT----------------SEEDV   65 (254)
Q Consensus         5 ~~~lItGas~gi-G--~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls----------------~~~~~   65 (254)
                      |+++.++||+|= =  .+++++|.++|++|++++.  +...+..++.+..+..+..+..                -...+
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~--~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP--PDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVV   79 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC--GGGHHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHH
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC--hhhHhHHHHCCCeEEECCccHHHHhhChhhhhHHHHHHHHHHH
Confidence            455556676432 2  4789999999999998774  3334444443322221111111                02335


Q ss_pred             HHHHHHHHHHcCCCcEEEeCC
Q psy12833         66 QKAVLLCKDSFGKLDVNVNCA   86 (254)
Q Consensus        66 ~~~~~~~~~~~~~id~li~~a   86 (254)
                      ...++.+.+...++|.+|...
T Consensus        80 ~~~~~~l~~~~~~~D~vi~~~  100 (391)
T d1pn3a_          80 AEWFDKVPAAIEGCDAVVTTG  100 (391)
T ss_dssp             HHHHHHHHHHHTTCSEEEEEE
T ss_pred             HHHHHHHHHHhcCCCeEEEcc
Confidence            555566666556789888743

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.88  E-value=0.38  Score=35.47  Aligned_cols=76  Identities=20%  Similarity=0.141  Sum_probs=55.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---------CCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---------GPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      +|.+||-.|+++|--.++..++.....+|+.++++++-.+...+.+         ..++.+...|..+.          .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~----------~  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------Y  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----------C
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc----------c
Confidence            4679999999999888888888888889999999887666554432         24567777775421          1


Q ss_pred             HHcCCCcEEEeCCcc
Q psy12833         74 DSFGKLDVNVNCAGI   88 (254)
Q Consensus        74 ~~~~~id~li~~ag~   88 (254)
                      ...+++|.++.+++.
T Consensus       146 ~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         146 AEEAPYDAIHVGAAA  160 (224)
T ss_dssp             GGGCCEEEEEECSBB
T ss_pred             chhhhhhhhhhhcch
Confidence            122478999988764

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=89.85  E-value=0.32  Score=34.67  Aligned_cols=73  Identities=15%  Similarity=0.125  Sum_probs=49.4

Q ss_pred             CCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCCccCC
Q psy12833         12 GASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISC   90 (254)
Q Consensus        12 as~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~   90 (254)
                      ||-|-|-+ ++.+++++.+|+.++|+++..+...+....++.++..+.++.+.   .+....  .+++|.++..-|++.
T Consensus        25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~---~l~~~~--~~~vdgIl~DLGvSs   97 (182)
T d1wg8a2          25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKR---HLAALG--VERVDGILADLGVSS   97 (182)
T ss_dssp             TTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHH---HHHHTT--CSCEEEEEEECSCCH
T ss_pred             eCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhccccceeEeehHHHHHHH---HHHHcC--CCccCEEEEEccCCH
Confidence            33333333 34555667899999999988776655456788999988876443   333221  357999999988754

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=89.84  E-value=0.69  Score=30.34  Aligned_cols=81  Identities=9%  Similarity=-0.050  Sum_probs=54.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCC--CHHHHHHHHHHHHHHcCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT--SEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls--~~~~~~~~~~~~~~~~~~i   79 (254)
                      |+..++||.--...+...+...|.+.|++|.. ..+.+.+.+..++  .++..+-+|+.  +.+. -++++++++....+
T Consensus         1 M~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~-a~~~~~al~~~~~--~~~dlvi~D~~mp~~~G-~e~~~~lr~~~~~~   76 (123)
T d1dbwa_           1 MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKM-HQSAEAFLAFAPD--VRNGVLVTDLRMPDMSG-VELLRNLGDLKINI   76 (123)
T ss_dssp             CCCCEEEEEESSHHHHHHHHHHHHHTTCEEEE-ESCHHHHHHHGGG--CCSEEEEEECCSTTSCH-HHHHHHHHHTTCCC
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEE-ECCHHHHHHHHhh--cCCcEEEEeccCccccc-hHHHHHHHhcCCCC
Confidence            46679999999999999999999999999865 4444444444443  34555555554  4333 35677777766667


Q ss_pred             cEEEeCC
Q psy12833         80 DVNVNCA   86 (254)
Q Consensus        80 d~li~~a   86 (254)
                      -+++..+
T Consensus        77 ~iI~lt~   83 (123)
T d1dbwa_          77 PSIVITG   83 (123)
T ss_dssp             CEEEEEC
T ss_pred             eEEEEEe
Confidence            7666554

>d1ptma_ c.77.1.3 (A:) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: PdxA-like
domain: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA
species: Escherichia coli [TaxId: 562]

Probab=89.78  E-value=0.68  Score=36.22  Aligned_cols=46  Identities=22%  Similarity=0.320  Sum_probs=29.9

Q ss_pred             CCCCcEEEEeCCC-ChHHHHHHHHHHHcC--CEEEEeeCCCchhHHHHHH
Q psy12833          1 MLKGVVGLVTGGA-SGLGKATVERIVREG--GRVVLCDLPTSEGESVAKE   47 (254)
Q Consensus         1 ml~~~~~lItGas-~giG~a~a~~l~~~g--~~v~~~~r~~~~~~~~~~~   47 (254)
                      |++.|+++||=|- .|||-+++..++++.  .++++++ +...+++..+.
T Consensus         1 M~k~krIaIT~GDPaGIGPEIilK~~~~~~~~~~ivig-d~~~l~~~~~~   49 (329)
T d1ptma_           1 MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCA-DATLLTNRAAM   49 (329)
T ss_dssp             CCCCCEEEEECCSTTSSHHHHHHHHTTSCCSSEEEEEE-CHHHHHHHHHH
T ss_pred             CCCCCeEEEEcCCccHhHHHHHHHHHhhcCCCCEEEEE-CHHHHHHHHHH
Confidence            8898888887664 799999998866543  3555443 33344444433

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.71  E-value=0.17  Score=35.61  Aligned_cols=31  Identities=10%  Similarity=-0.047  Sum_probs=26.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEe
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLC   34 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~   34 (254)
                      +++.++|.|| |.+|..++..|.+.|.++.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            4678999988 899999999999999865443

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.63  E-value=0.19  Score=38.03  Aligned_cols=31  Identities=23%  Similarity=0.389  Sum_probs=27.7

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      |+|.|| |-.|..+|.+|+++|.+|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788887 8889999999999999999998853

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=89.57  E-value=0.39  Score=33.06  Aligned_cols=52  Identities=17%  Similarity=0.176  Sum_probs=37.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHc--CCEEEEe--eCCCchhHHHHHHhCCCceEE
Q psy12833          4 GVVGLVTGGASGLGKATVERIVRE--GGRVVLC--DLPTSEGESVAKELGPDVKFA   55 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~--g~~v~~~--~r~~~~~~~~~~~~~~~~~~~   55 (254)
                      -|++.|.|+||-||......+.+.  .++|+..  .++-+.+.+...++..+..++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i   57 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVI   57 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhcccccee
Confidence            489999999999999998887665  5777653  445556666666766555443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=89.13  E-value=1.5  Score=30.52  Aligned_cols=74  Identities=16%  Similarity=0.093  Sum_probs=44.5

Q ss_pred             CCcEEEEeCCCC-hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH---hCCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          3 KGVVGLVTGGAS-GLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         3 ~~~~~lItGas~-giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +|+++|=.|+++ .+|    -+.+++|++|+.++.++...+.+.+.   .+.....+..|.   +   .+.........+
T Consensus        41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d---~~~~~~~~~~~~  110 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---E---VFLPEAKAQGER  110 (171)
T ss_dssp             TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---H---HHHHHHHHTTCC
T ss_pred             CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeeh---h---cccccccccCCc
Confidence            567777666554 444    34667899999999988877655443   344444444332   2   123333333357


Q ss_pred             CcEEEeCC
Q psy12833         79 LDVNVNCA   86 (254)
Q Consensus        79 id~li~~a   86 (254)
                      .|+++.+.
T Consensus       111 fD~If~DP  118 (171)
T d1ws6a1         111 FTVAFMAP  118 (171)
T ss_dssp             EEEEEECC
T ss_pred             cceeEEcc
Confidence            99998874

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.07  E-value=0.21  Score=38.29  Aligned_cols=32  Identities=16%  Similarity=0.264  Sum_probs=27.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      .|+|.|| |-+|.++|.+|+++|. +|.++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4888888 7999999999999996 699998864

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.55  E-value=0.83  Score=32.50  Aligned_cols=71  Identities=15%  Similarity=0.137  Sum_probs=48.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh---C-CCceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL---G-PDVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +++.+||=.|++.|.   .+..|+++|++|+.++.+++.++...+..   + .++.+...|+.+..     .      -+
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~------~~   94 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----F------DG   94 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----C------CC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----c------cc
Confidence            456689999986543   45678899999999999988776554432   2 34677777876532     0      13


Q ss_pred             CCcEEEeCC
Q psy12833         78 KLDVNVNCA   86 (254)
Q Consensus        78 ~id~li~~a   86 (254)
                      ..|+++.+.
T Consensus        95 ~fD~I~~~~  103 (198)
T d2i6ga1          95 EYDFILSTV  103 (198)
T ss_dssp             CEEEEEEES
T ss_pred             cccEEEEee
Confidence            689887654

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.48  E-value=1.6  Score=28.86  Aligned_cols=85  Identities=18%  Similarity=0.292  Sum_probs=55.7

Q ss_pred             CCCcEEEEeCCC---ChHHHHHHHHHHHcC-CEEEEeeCCCchhHH-----HHHHhCCCceEEecCCCCHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTGGA---SGLGKATVERIVREG-GRVVLCDLPTSEGES-----VAKELGPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         2 l~~~~~lItGas---~giG~a~a~~l~~~g-~~v~~~~r~~~~~~~-----~~~~~~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      ++-|++.|.|+|   +..|..+.+.|.+.| .+|+.+..+.+...-     ..+++...+.....-+ ..+.+.++++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi~v-p~~~~~~~~~~~   84 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVV-PKRFVKDTLIQC   84 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECS-CHHHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEEec-ChHHhHHHHHHH
Confidence            456999999999   789999999887655 589888776543211     1112233444444433 578888899988


Q ss_pred             HHHcCCCc-EEEeCCccC
Q psy12833         73 KDSFGKLD-VNVNCAGIS   89 (254)
Q Consensus        73 ~~~~~~id-~li~~ag~~   89 (254)
                      .+.  ++. +++..+|+.
T Consensus        85 ~~~--g~~~~vi~s~Gf~  100 (129)
T d2csua1          85 GEK--GVKGVVIITAGFG  100 (129)
T ss_dssp             HHH--TCCEEEECCCSST
T ss_pred             HHc--CCCEEEEeccccc
Confidence            877  444 455555543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.36  E-value=0.16  Score=32.78  Aligned_cols=37  Identities=19%  Similarity=0.229  Sum_probs=30.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .+||+|+|.|+ |--|..++..|++.+.+++...|+..
T Consensus        30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            36899999998 47788999999988888777766543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.23  E-value=0.34  Score=36.28  Aligned_cols=33  Identities=18%  Similarity=0.377  Sum_probs=29.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEee
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCD   35 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~   35 (254)
                      ++||+++|=| .|-+|..+++.|.+.|++|+.++
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            5789999987 69999999999999999998655

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.81  E-value=2.4  Score=27.52  Aligned_cols=79  Identities=13%  Similarity=-0.026  Sum_probs=53.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHH-HHHHHHHHHHHHcCCCcEEE
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEE-DVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~-~~~~~~~~~~~~~~~id~li   83 (254)
                      .++||.--...+...+...|.+.|++|..+ .+...+-+..++  .++..+-+|+.-++ +=-++++++.+....+-+++
T Consensus         4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a-~~~~~a~~~l~~--~~~dlii~D~~mp~~~G~el~~~l~~~~~~~piI~   80 (123)
T d1krwa_           4 GIVWVVDDDSSIRWVLERALAGAGLTCTTF-ENGNEVLAALAS--KTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII   80 (123)
T ss_dssp             CEEEEESSSHHHHHHHHHHHHHTTCEEEEE-SSSHHHHHHHTT--CCCSEEEECCSSSSSTTHHHHHHHHHHSSSCCEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEe-CCHHHHHHHHHh--CCCCEEEehhhcCCchHHHHHHHHHHhCCCCeEEE
Confidence            479999999999999999999999999864 444444333333  34566666654332 12346777777776777766


Q ss_pred             eCC
Q psy12833         84 NCA   86 (254)
Q Consensus        84 ~~a   86 (254)
                      ..+
T Consensus        81 ~t~   83 (123)
T d1krwa_          81 MTA   83 (123)
T ss_dssp             SCC
T ss_pred             Eec
Confidence            554

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.58  E-value=1  Score=34.81  Aligned_cols=70  Identities=20%  Similarity=0.208  Sum_probs=47.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHH-----HhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVAK-----ELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +||+||-.|++.|+   ++..+++.|+ +|+.++.++. .....+     .+..++.++..|..+.+          ...
T Consensus        33 ~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~----------~~~   98 (316)
T d1oria_          33 KDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE----------LPV   98 (316)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC----------CSS
T ss_pred             CcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc----------ccc
Confidence            68999999998875   4556778886 6999987754 222222     12567889988887643          112


Q ss_pred             CCCcEEEeCC
Q psy12833         77 GKLDVNVNCA   86 (254)
Q Consensus        77 ~~id~li~~a   86 (254)
                      .++|+++...
T Consensus        99 ~~~D~ivs~~  108 (316)
T d1oria_          99 EKVDIIISEW  108 (316)
T ss_dssp             SCEEEEEECC
T ss_pred             ceeEEEeeee
Confidence            4789887653

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.54  E-value=1.2  Score=30.56  Aligned_cols=79  Identities=18%  Similarity=0.193  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCC-----CceEEecCCCCHHHHHHHHHHHHHHcC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGP-----DVKFAPVDVTSEEDVQKAVLLCKDSFG   77 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dls~~~~~~~~~~~~~~~~~   77 (254)
                      +|+++.|.+.|||.|--++..+.+.|.++  ..-+++..+++.+.+..     +..-+-.+ .+.+...+.++.+.+. +
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~~d-~   77 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLLQD-P   77 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHHHS-T
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHHcC-C
Confidence            58899999999999999999999999776  33344444454444421     22222233 3567777777766654 5


Q ss_pred             CCcEEEeC
Q psy12833         78 KLDVNVNC   85 (254)
Q Consensus        78 ~id~li~~   85 (254)
                      .+|.++..
T Consensus        78 ~vd~v~v~   85 (163)
T d2csua3          78 NVDMLIAI   85 (163)
T ss_dssp             TCSEEEEE
T ss_pred             CcCEEEEe
Confidence            68876543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.13  E-value=0.36  Score=35.64  Aligned_cols=35  Identities=29%  Similarity=0.356  Sum_probs=29.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhH
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGE   42 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~   42 (254)
                      |+|.|| |.-|..+|..|+++|++|+++.++.....
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~g~   39 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKLGR   39 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCCCc
Confidence            788888 67889999999999999999998765443

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.91  E-value=0.3  Score=35.79  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=29.2

Q ss_pred             CcEEEEeCCCChHHH-----HHHHHHHHcCCEEEEeeCC
Q psy12833          4 GVVGLVTGGASGLGK-----ATVERIVREGGRVVLCDLP   37 (254)
Q Consensus         4 ~~~~lItGas~giG~-----a~a~~l~~~g~~v~~~~r~   37 (254)
                      ||++.|+|+-||.|+     .++..|+++|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            689999999999986     5677788999999999865

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=86.87  E-value=2.6  Score=27.16  Aligned_cols=80  Identities=14%  Similarity=0.047  Sum_probs=54.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++||.--..-+-..+...|.+.|++|..+.. .+.+-+..++....+......+-+.+.. +++.++++....+.+++.
T Consensus         3 krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~-~~~al~~l~~~~~dlillD~~mp~~~G~-~~~~~~r~~~~~~~ii~l   80 (121)
T d1mvoa_           3 KKILVVDDEESIVTLLQYNLERSGYDVITASD-GEEALKKAETEKPDLIVLDVMLPKLDGI-EVCKQLRQQKLMFPILML   80 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESS-HHHHHHHHHHHCCSEEEEESSCSSSCHH-HHHHHHHHTTCCCCEEEE
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCEEEEECC-HHHHHHHHhcccccEEEecccccCCCCc-hhhhhhhccCCCCEEEEE
Confidence            78999999999999999999999999886544 4444444444444555555555555444 456667776555666655


Q ss_pred             CC
Q psy12833         85 CA   86 (254)
Q Consensus        85 ~a   86 (254)
                      .+
T Consensus        81 t~   82 (121)
T d1mvoa_          81 TA   82 (121)
T ss_dssp             EC
T ss_pred             Ee
Confidence            44

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.85  E-value=0.28  Score=37.23  Aligned_cols=33  Identities=15%  Similarity=0.098  Sum_probs=29.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      .|+|.|| |..|..+|..|+++|.+|.++.++.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4888998 48999999999999999999998753

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=86.82  E-value=3.9  Score=28.98  Aligned_cols=130  Identities=11%  Similarity=0.027  Sum_probs=73.5

Q ss_pred             hHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeCCccCCCccc
Q psy12833         15 GLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKI   94 (254)
Q Consensus        15 giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   94 (254)
                      ....+++..|...|..++.+.-...                    .+.+.+.    ......+.++.+|+..+.......
T Consensus        38 ~~~~~l~~~l~~~g~~~~~~~~~~~--------------------~~~~~l~----~~~~~~~~~~~vv~l~~~~~~~~~   93 (209)
T d2fr1a2          38 ETSTAAREALESAGARVRELVVDAR--------------------CGRDELA----ERLRSVGEVAGVLSLLAVDEAEPE   93 (209)
T ss_dssp             HHHHHHHHHHHTTSCEEEEEECCTT--------------------CCHHHHH----HHHTTSCCCSEEEECTTTTCCCCS
T ss_pred             HHHHHHHHHHHhCCCeEEEecCCCc--------------------cCHHHHH----HHhhccCCCCeEEEeCCCCCCCCc
Confidence            5778888899999998876544321                    1223222    223344678888887664322111


Q ss_pred             cccCCCCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCCcEEEEEeccccccCCCCCccchhchHHHHHhHH
Q psy12833         95 FNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL  174 (254)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ii~vss~~~~~~~~~~~~Y~~sK~a~~~~~~  174 (254)
                               ..+...    ..+...+.++|.+..   ...      ..++.+++....... +.-..-....+++-+|.|
T Consensus        94 ---------~~~~~~----~~~~~~l~l~qal~~---~~~------~~~l~~vT~~a~~~~-~~d~~~~p~~A~l~Gl~r  150 (209)
T d2fr1a2          94 ---------EAPLAL----ASLADTLSLVQAMVS---AEL------GCPLWTVTESAVATG-PFERVRNAAHGALWGVGR  150 (209)
T ss_dssp             ---------SCGGGC----HHHHHHHHHHHHHHH---TTC------CCCEEEEEESCSCSS-TTSCCSCGGGHHHHHHHH
T ss_pred             ---------chhHHH----HHHHHHHHHHHHHHh---CCC------CCcEEEEEcCCcccC-CCcccCCHhHHhHHHHHH
Confidence                     011111    113344555555432   111      345666666443222 222334678999999999


Q ss_pred             HHHHHhccCCcEEEEEe
Q psy12833        175 PMARDLAGAGIRVNTIA  191 (254)
Q Consensus       175 ~la~e~~~~~i~v~~v~  191 (254)
                      +++.|+....++...+.
T Consensus       151 ~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         151 VIALENPAVWGGLVDVP  167 (209)
T ss_dssp             HHHHHCGGGEEEEEEEC
T ss_pred             HHHHhCCCceEEEEECC
Confidence            99999987666666663

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.73  E-value=0.67  Score=34.07  Aligned_cols=76  Identities=17%  Similarity=0.070  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHH-HcC----CEEEEeeCCCchhHHHHHHh---------CCCceEEecCCCCHHHHHHH
Q psy12833          3 KGVVGLVTGGASGLGKATVERIV-REG----GRVVLCDLPTSEGESVAKEL---------GPDVKFAPVDVTSEEDVQKA   68 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~-~~g----~~v~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dls~~~~~~~~   68 (254)
                      +|.+||..|+++|--.++..+++ ..|    .+|+.+.++++-.+...+.+         ..++.++..|..+       
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~-------  152 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-------  152 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccc-------
Confidence            47899999999998888777776 445    48999999876554443221         2478888888753       


Q ss_pred             HHHHHHHcCCCcEEEeCCcc
Q psy12833         69 VLLCKDSFGKLDVNVNCAGI   88 (254)
Q Consensus        69 ~~~~~~~~~~id~li~~ag~   88 (254)
                         .....++.|.++.+++.
T Consensus       153 ---~~~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         153 ---GYPPNAPYNAIHVGAAA  169 (223)
T ss_dssp             ---CCGGGCSEEEEEECSCB
T ss_pred             ---ccccccceeeEEEEeec
Confidence               11233578999888775

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.62  E-value=0.31  Score=36.39  Aligned_cols=40  Identities=15%  Similarity=0.268  Sum_probs=33.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA   45 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~   45 (254)
                      .-++|.|| |.-|...|.+|+++|.+|.++.++.....++.
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k~~   44 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL   44 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCceE
Confidence            34888888 77888999999999999999999877655543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.58  E-value=0.36  Score=35.06  Aligned_cols=31  Identities=16%  Similarity=0.081  Sum_probs=27.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      |+|.|| |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788886 7888999999999999999998865

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.48  E-value=0.51  Score=36.04  Aligned_cols=34  Identities=21%  Similarity=0.170  Sum_probs=28.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP   37 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~   37 (254)
                      +.++|+|+|| |--|...|.+|+++|++|.+.-.+
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            3467999998 777899999999999999987543

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=86.45  E-value=0.81  Score=31.25  Aligned_cols=34  Identities=18%  Similarity=0.117  Sum_probs=26.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC----CEEEEeeCCCc
Q psy12833          6 VGLVTGGASGLGKATVERIVREG----GRVVLCDLPTS   39 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g----~~v~~~~r~~~   39 (254)
                      ++.|.||||-.|..+.+.|.++.    .++...+.++.
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~   39 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQI   39 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCC
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccc
Confidence            58999999999999999887643    46665555443

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=86.06  E-value=0.89  Score=32.95  Aligned_cols=73  Identities=11%  Similarity=-0.007  Sum_probs=49.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh----CCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL----GPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      .+.+||=.|++.|.-   +..|+++|++|+.++.+++.++...+..    ..++.++.+|..+..    +      ..+.
T Consensus        15 ~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~----~------~~~~   81 (231)
T d1vl5a_          15 GNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP----F------TDER   81 (231)
T ss_dssp             SCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC----S------CTTC
T ss_pred             CcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc----c------cccc
Confidence            367899999887743   3557788999999999887655543322    356889999887642    0      1146


Q ss_pred             CcEEEeCCcc
Q psy12833         79 LDVNVNCAGI   88 (254)
Q Consensus        79 id~li~~ag~   88 (254)
                      .|+++.+...
T Consensus        82 fD~v~~~~~l   91 (231)
T d1vl5a_          82 FHIVTCRIAA   91 (231)
T ss_dssp             EEEEEEESCG
T ss_pred             cccccccccc
Confidence            8988876543

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.03  E-value=3.9  Score=28.21  Aligned_cols=73  Identities=19%  Similarity=0.145  Sum_probs=41.7

Q ss_pred             EEEEeCC-CChHHHHHHHHHHHcC----CEEEEeeCCCch--hHHHHH-------HhCCCceEEecCCCCHHHHHHHHHH
Q psy12833          6 VGLVTGG-ASGLGKATVERIVREG----GRVVLCDLPTSE--GESVAK-------ELGPDVKFAPVDVTSEEDVQKAVLL   71 (254)
Q Consensus         6 ~~lItGa-s~giG~a~a~~l~~~g----~~v~~~~r~~~~--~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~~~~   71 (254)
                      ++.|.|| |.|.+.+++..+....    .++++.+.+++.  ++.+..       +.+.++...  ..+|..   +.++ 
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td~~---~al~-   76 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLDRR---RALD-   76 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESCHH---HHHT-
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCCch---hhcC-
Confidence            4667776 5577777777655432    389999998753  332221       112233322  233432   2222 


Q ss_pred             HHHHcCCCcEEEeCCccCC
Q psy12833         72 CKDSFGKLDVNVNCAGISC   90 (254)
Q Consensus        72 ~~~~~~~id~li~~ag~~~   90 (254)
                            .-|++|+.++...
T Consensus        77 ------gaDvVv~ta~~~~   89 (169)
T d1s6ya1          77 ------GADFVTTQFRVGG   89 (169)
T ss_dssp             ------TCSEEEECCCTTH
T ss_pred             ------CCCEEEEccccCC
Confidence                  6799999999754

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=85.99  E-value=0.9  Score=29.54  Aligned_cols=81  Identities=6%  Similarity=-0.046  Sum_probs=53.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      -++||.--..-+...+...|.+.|++|..+....+.++.+.+.....+..+...+-+.+ --++++++++....+-+++.
T Consensus         3 ~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~~dliilD~~lp~~~-G~el~~~ir~~~~~~pii~l   81 (118)
T d2b4aa1           3 FRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLSTCDLLIVSDQLVDLS-IFSLLDIVKEQTKQPSVLIL   81 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGGSCSEEEEETTCTTSC-HHHHHHHHTTSSSCCEEEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHHHHHHHHHhcCCCCEEEEeCCCCCCC-HHHHHHHHHhcCCCCcEEEE
Confidence            47899999999999999999999999986654343333333322223444444444433 44677888777666777776


Q ss_pred             CC
Q psy12833         85 CA   86 (254)
Q Consensus        85 ~a   86 (254)
                      .+
T Consensus        82 t~   83 (118)
T d2b4aa1          82 TT   83 (118)
T ss_dssp             ES
T ss_pred             EC
Confidence            54

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=85.96  E-value=0.35  Score=36.56  Aligned_cols=36  Identities=22%  Similarity=0.204  Sum_probs=30.4

Q ss_pred             CcEEEEeCCCChHHHH-----HHHHHHHcCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKA-----TVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a-----~a~~l~~~g~~v~~~~r~~~   39 (254)
                      +++++|+.|=||.|+.     ++..|+++|++|.+++.+..
T Consensus        19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            6778888889999975     47889999999999999864

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.93  E-value=0.77  Score=31.52  Aligned_cols=34  Identities=21%  Similarity=0.134  Sum_probs=27.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCE-EEEeeCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGR-VVLCDLPT   38 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~-v~~~~r~~   38 (254)
                      +++|+|.|| |..|..+|..+.+.|++ |+++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            467888876 88899999999999985 77777754

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=85.62  E-value=0.46  Score=34.75  Aligned_cols=70  Identities=10%  Similarity=0.023  Sum_probs=51.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++++++|=.|++.|.   ++..|+++|++|+.++.+++.++...+....++.++..|+.+..           ..+++|+
T Consensus        19 ~~~~~VLDiGcG~G~---~~~~l~~~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~-----------~~~~fD~   84 (225)
T d2p7ia1          19 FRPGNLLELGSFKGD---FTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ-----------LPRRYDN   84 (225)
T ss_dssp             CCSSCEEEESCTTSH---HHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC-----------CSSCEEE
T ss_pred             CCCCcEEEEeCCCcH---HHHHHHHcCCeEEEEeCcHHHhhhhhcccccccccccccccccc-----------ccccccc
Confidence            467788888886653   24567888999999999988887777777778888888875431           1137898


Q ss_pred             EEeC
Q psy12833         82 NVNC   85 (254)
Q Consensus        82 li~~   85 (254)
                      +++.
T Consensus        85 I~~~   88 (225)
T d2p7ia1          85 IVLT   88 (225)
T ss_dssp             EEEE
T ss_pred             cccc
Confidence            8754

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.58  E-value=1.6  Score=33.87  Aligned_cols=70  Identities=16%  Similarity=0.160  Sum_probs=46.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHH---HHh--CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGG-RVVLCDLPTSEGESVA---KEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~---~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +|++||-.|++.|+   ++..++++|+ +|+.++.++ .++...   .+.  ..++.++..|+.+.+          -..
T Consensus        38 ~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~~  103 (328)
T d1g6q1_          38 KDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LPF  103 (328)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CSS
T ss_pred             CcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Ccc
Confidence            68999999988774   4556678887 788888775 222222   222  457888988887642          011


Q ss_pred             CCCcEEEeCC
Q psy12833         77 GKLDVNVNCA   86 (254)
Q Consensus        77 ~~id~li~~a   86 (254)
                      .++|+++...
T Consensus       104 ~~~D~i~se~  113 (328)
T d1g6q1_         104 PKVDIIISEW  113 (328)
T ss_dssp             SCEEEEEECC
T ss_pred             cceeEEEEEe
Confidence            3689887753

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=85.36  E-value=0.13  Score=35.49  Aligned_cols=38  Identities=13%  Similarity=0.113  Sum_probs=27.8

Q ss_pred             CCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhC
Q psy12833         12 GASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELG   49 (254)
Q Consensus        12 as~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   49 (254)
                      |+|-+|+++++.|.+.+..+.+.+|+.++++++.++.+
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~   43 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG   43 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence            45889999999886544334588999999999888764

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=85.22  E-value=4.3  Score=28.03  Aligned_cols=73  Identities=21%  Similarity=0.319  Sum_probs=43.1

Q ss_pred             EEEEeCCCC-hHHHHHHHHHHHc----CCEEEEeeCCCchhHHHHH-------HhCCCceEEecCCCCHHHHHHHHHHHH
Q psy12833          6 VGLVTGGAS-GLGKATVERIVRE----GGRVVLCDLPTSEGESVAK-------ELGPDVKFAPVDVTSEEDVQKAVLLCK   73 (254)
Q Consensus         6 ~~lItGas~-giG~a~a~~l~~~----g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~~~~~~   73 (254)
                      ++.|.||++ |...++...|+..    +.++++.++++++++....       ..+........  +|.   ++.++   
T Consensus         4 KI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~---~eaL~---   75 (171)
T d1obba1           4 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNL---DDVII---   75 (171)
T ss_dssp             EEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCH---HHHHT---
T ss_pred             EEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CCh---hhccc---
Confidence            577778633 4444566556543    3599999999877654332       22444444333  232   22333   


Q ss_pred             HHcCCCcEEEeCCccCC
Q psy12833         74 DSFGKLDVNVNCAGISC   90 (254)
Q Consensus        74 ~~~~~id~li~~ag~~~   90 (254)
                          ..|++|+.++...
T Consensus        76 ----dad~Vv~~~~~g~   88 (171)
T d1obba1          76 ----DADFVINTAMVGG   88 (171)
T ss_dssp             ----TCSEEEECCCTTH
T ss_pred             ----CCCeEeeeccccc
Confidence                7899999988653

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=85.13  E-value=2.2  Score=30.43  Aligned_cols=85  Identities=13%  Similarity=0.100  Sum_probs=50.6

Q ss_pred             CCCCcEEE-EeCCCChHHH-----HHHHHHHHcC-----CEEEEeeCCCchhHHHHHH-----------------hCCCc
Q psy12833          1 MLKGVVGL-VTGGASGLGK-----ATVERIVREG-----GRVVLCDLPTSEGESVAKE-----------------LGPDV   52 (254)
Q Consensus         1 ml~~~~~l-ItGas~giG~-----a~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~-----------------~~~~~   52 (254)
                      |..-++++ |.||||.+.+     ++-+ |..+|     .+|+.++|+.-..++..+.                 +-.++
T Consensus         1 ~~e~~t~lVIFGaTGDLa~RKL~PAL~~-L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~   79 (195)
T d1h9aa1           1 VSEIKTLVTFFGGTGDLAKRKLYPSVFN-LYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHF   79 (195)
T ss_dssp             CCCCCEEEEEETTTSHHHHHTHHHHHHH-HHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTE
T ss_pred             CCCCceEEEEECcccHHHHhHHHHHHHH-HHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhcc
Confidence            33446666 6799999986     3333 34444     5788999976543333221                 13467


Q ss_pred             eEEecCCCCHHHHHHHHHHH---HHHcC-CCcEEEeCC
Q psy12833         53 KFAPVDVTSEEDVQKAVLLC---KDSFG-KLDVNVNCA   86 (254)
Q Consensus        53 ~~~~~Dls~~~~~~~~~~~~---~~~~~-~id~li~~a   86 (254)
                      .+++.|++++++..++.+.+   .+..+ .-..+++.|
T Consensus        80 ~y~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~rifYLA  117 (195)
T d1h9aa1          80 SYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMS  117 (195)
T ss_dssp             EEEECCTTCTTTHHHHHHHHHHHHHHHTCCSCEEEEEC
T ss_pred             ceeeEeeccHhhHHHHHHHHHHHHhhcCCCcceEEEEe
Confidence            78888888776555554444   44433 335566654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.88  E-value=0.4  Score=34.90  Aligned_cols=74  Identities=18%  Similarity=0.120  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCCChHH-HHHHHHHHHcCCEEEEeeCCCchhHHHHHHh--CCCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          3 KGVVGLVTGGASGLG-KATVERIVREGGRVVLCDLPTSEGESVAKEL--GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         3 ~~~~~lItGas~giG-~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      .|.+||=.|+++|.- .+++. +...| +|+.++.++..++.+.+..  ..++.++..|..++......       ...+
T Consensus        56 pg~~VLDlGcG~G~~~~~la~-~v~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~-------~~~v  126 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLAD-IVDEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGI-------VEKV  126 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHH-HTTTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTT-------CCCE
T ss_pred             CCCEEEEeCCcCCHHHHHHHH-hccCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccc-------cceE
Confidence            467899999877743 33443 33444 8999999988777665543  46788888888876543222       2356


Q ss_pred             cEEEeC
Q psy12833         80 DVNVNC   85 (254)
Q Consensus        80 d~li~~   85 (254)
                      |++++.
T Consensus       127 d~v~~~  132 (209)
T d1nt2a_         127 DLIYQD  132 (209)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            766654

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.52  E-value=0.36  Score=35.22  Aligned_cols=34  Identities=24%  Similarity=0.255  Sum_probs=28.9

Q ss_pred             cEEEEeCCCChHHH-----HHHHHHHHcCCEEEEeeCCC
Q psy12833          5 VVGLVTGGASGLGK-----ATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         5 ~~~lItGas~giG~-----a~a~~l~~~g~~v~~~~r~~   38 (254)
                      |++.|+++-||.|+     .+|..|+++|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            78999999999986     56677899999999998764

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.48  E-value=2.3  Score=29.89  Aligned_cols=75  Identities=13%  Similarity=0.157  Sum_probs=49.9

Q ss_pred             CCCcEEEEeC-CCChHHHHHHHHHHHcCC-EEEEeeCCCchhHHHHHHh-----CCCceEEecCCCCHHHHHHHHHHHHH
Q psy12833          2 LKGVVGLVTG-GASGLGKATVERIVREGG-RVVLCDLPTSEGESVAKEL-----GPDVKFAPVDVTSEEDVQKAVLLCKD   74 (254)
Q Consensus         2 l~~~~~lItG-as~giG~a~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~   74 (254)
                      ++|+++|=.. |||.+|.+    .+++|+ +|+.++.+.+..+.+.+.+     ..++.++..|..      ++++...+
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~~  109 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFYE  109 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHHH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhcc
Confidence            3566766655 45667764    456788 6999999987766655433     346778888863      34555555


Q ss_pred             HcCCCcEEEeCC
Q psy12833         75 SFGKLDVNVNCA   86 (254)
Q Consensus        75 ~~~~id~li~~a   86 (254)
                      ...+.|+++...
T Consensus       110 ~~~~fDlIflDP  121 (182)
T d2fhpa1         110 EKLQFDLVLLDP  121 (182)
T ss_dssp             TTCCEEEEEECC
T ss_pred             cCCCcceEEech
Confidence            545789998764

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.44  E-value=0.58  Score=31.82  Aligned_cols=36  Identities=25%  Similarity=0.273  Sum_probs=28.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC---CEEEEeeCCCchh
Q psy12833          6 VGLVTGGASGLGKATVERIVREG---GRVVLCDLPTSEG   41 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g---~~v~~~~r~~~~~   41 (254)
                      +|.|.||||-.|+.+.+.|.+++   .++...+.+....
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G   42 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG   42 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC
Confidence            58999999999999999998665   3677666554443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=84.06  E-value=0.45  Score=35.64  Aligned_cols=32  Identities=25%  Similarity=0.267  Sum_probs=28.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      .|+|.|| |--|...|.+|+++|++|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4889998 7788999999999999999998753

>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: DNA-binding response regulator MicA, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.92  E-value=3.7  Score=26.20  Aligned_cols=79  Identities=11%  Similarity=0.103  Sum_probs=50.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEe
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVN   84 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~   84 (254)
                      |++||.--...+...+...|.+.|++|..+ .+.+++-+..++....+......+.+.+. -++++++.+. ..+-+++.
T Consensus         1 KrILiVdDd~~~~~~l~~~L~~~g~~v~~a-~~~~eal~~~~~~~~dlillD~~mp~~~G-~~~~~~i~~~-~~~pvI~l   77 (117)
T d2a9pa1           1 KKILIVDDEKPISDIIKFNMTKEGYEVVTA-FNGREALEQFEAEQPDIIILDLMLPEIDG-LEVAKTIRKT-SSVPILML   77 (117)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SSHHHHHHHHHHHCCSEEEECSSCSSSCH-HHHHHHHHTT-CCCCEEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEE-CCHHHHHHHHHhcCCCEEEeccccCCCCc-cHHHHHHHhC-CCCCEEEE
Confidence            689999999999999999999999999855 44444444444433344444444444444 3566677654 34555554


Q ss_pred             CC
Q psy12833         85 CA   86 (254)
Q Consensus        85 ~a   86 (254)
                      .+
T Consensus        78 t~   79 (117)
T d2a9pa1          78 SA   79 (117)
T ss_dssp             ES
T ss_pred             ec
Confidence            43

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.79  E-value=0.6  Score=35.66  Aligned_cols=31  Identities=23%  Similarity=0.382  Sum_probs=27.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      |+|.|+ |..|...|.+|+++|++|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            788887 8889999999999999999998754

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.70  E-value=0.67  Score=31.83  Aligned_cols=34  Identities=12%  Similarity=0.188  Sum_probs=26.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC---EEEEeeCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGG---RVVLCDLP   37 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~---~v~~~~r~   37 (254)
                      |-+|.|.||||-.|.++.+.|.++.+   ++...+.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~   37 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA   37 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECG
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccc
Confidence            45789999999999999999998864   44444443

>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional activator sigm54 (NtrC1), N-terminal domain
species: Aquifex aeolicus [TaxId: 63363]

Probab=83.68  E-value=2.6  Score=27.90  Aligned_cols=79  Identities=14%  Similarity=0.011  Sum_probs=53.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEEEeC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNC   85 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~   85 (254)
                      ++||.--...+...+...|.+.|++|.. +.+.+.+-+...+....+.+....+-+.+.+ ++++.+++....+-+++..
T Consensus         2 kILiVDDd~~~~~~l~~~L~~~g~~v~~-a~~~~eAl~~l~~~~~dlvilD~~mp~~~G~-e~~~~lr~~~~~~piI~lT   79 (137)
T d1ny5a1           2 NVLVIEDDKVFRGLLEEYLSMKGIKVES-AERGKEAYKLLSEKHFNVVLLDLLLPDVNGL-EILKWIKERSPETEVIVIT   79 (137)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHHTCEEEE-ESSHHHHHHHHHHSCCSEEEEESBCSSSBHH-HHHHHHHHHCTTSEEEEEE
T ss_pred             EEEEEecCHHHHHHHHHHHHHCCCEEEE-ECCHHHHHHHhhccccccchHHHhhhhhhHH-HHHHHHHHhCCCCCEEEEE
Confidence            5888888889999999999999999875 4455554444444344444444445555544 6777787776677777655


Q ss_pred             C
Q psy12833         86 A   86 (254)
Q Consensus        86 a   86 (254)
                      +
T Consensus        80 ~   80 (137)
T d1ny5a1          80 G   80 (137)
T ss_dssp             E
T ss_pred             C
Confidence            4

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=83.59  E-value=1.9  Score=35.46  Aligned_cols=76  Identities=17%  Similarity=0.086  Sum_probs=50.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHH---HHhCCCceEEecCCCCHHHHHHHHHHHHHHcCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVA---KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGK   78 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~   78 (254)
                      +.||++.|.|+ +....++++.|.+.|.+|+.++......+...   +.++...  +..|=.|..++.+++++.     +
T Consensus       343 l~Gkrv~i~~~-~~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~--~i~~d~~~~el~~~i~~~-----~  414 (477)
T d1m1na_         343 LEGKRVMLYIG-GLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDST--LLYDDVTGYEFEEFVKRI-----K  414 (477)
T ss_dssp             HTTCEEEECBS-SSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTC--EEEESCBHHHHHHHHHHH-----C
T ss_pred             hcCCcEEEecC-chhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCc--EEecCCCHHHHHHHHHhc-----C
Confidence            47899999876 45778899989899999887765443322222   2223322  223334677777777766     8


Q ss_pred             CcEEEeC
Q psy12833         79 LDVNVNC   85 (254)
Q Consensus        79 id~li~~   85 (254)
                      +|+++-+
T Consensus       415 pDL~ig~  421 (477)
T d1m1na_         415 PDLIGSG  421 (477)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEC
Confidence            9999854

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

Probab=83.27  E-value=3.5  Score=29.09  Aligned_cols=81  Identities=14%  Similarity=0.051  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHcCCCcEE
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVN   82 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l   82 (254)
                      +.|+++|.|| +|.|+.+...+.+.+++++..--+....+ ....+ .+..++ .-+.|...-+++++.+.+...++..+
T Consensus         1 k~kkl~i~Ga-gg~~~~v~di~~~~~~~~~~f~dd~~~~~-~~~~~-~~~~~~-iaIG~~~~R~~~~~~~~~~~~~~~~~   76 (193)
T d3bswa1           1 RTEKIYIYGA-SGHGLVCEDVAKNMGYKECIFLDDFKGMK-FESTL-PKYDFF-IAIGNNEIRKKIYQKISENGFKIVNL   76 (193)
T ss_dssp             CCSEEEEEC---CHHHHHHHHHHHHTCCEEEECCCCTTGG-GGGGS-CCCEEE-ECCSCHHHHHHHHHHHHHTTCCBCCE
T ss_pred             CCCEEEEEcC-CHhHHHHHHHHHhCCCcEEEEEcCCCCcc-ccccc-ccccEE-EEECCcHHHHHHHHHhhhhcccccee
Confidence            4689999998 57899999988888988765432222221 11222 233333 34678877788888887764455556


Q ss_pred             EeCCc
Q psy12833         83 VNCAG   87 (254)
Q Consensus        83 i~~ag   87 (254)
                      ||-..
T Consensus        77 I~p~a   81 (193)
T d3bswa1          77 IHKSA   81 (193)
T ss_dssp             ECTTC
T ss_pred             cCCCc
Confidence            66543

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.17  E-value=4.1  Score=26.18  Aligned_cols=78  Identities=17%  Similarity=0.019  Sum_probs=52.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCC--CCHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDV--TSEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dl--s~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++||.--...+...+...|.+.|++|..+. +..++-+..++.  ++..+-+|+  -+.+. -++++++++....+-+++
T Consensus         3 kILiVDD~~~~~~~l~~~L~~~g~~v~~a~-~~~eal~~~~~~--~~dlvl~D~~mP~~~G-~el~~~ir~~~~~~piI~   78 (121)
T d1ys7a2           3 RVLVVDDDSDVLASLERGLRLSGFEVATAV-DGAEALRSATEN--RPDAIVLDINMPVLDG-VSVVTALRAMDNDVPVCV   78 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHS--CCSEEEEESSCSSSCH-HHHHHHHHHTTCCCCEEE
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHHhC--CCCEEEEEeeccCccc-HHHHHHHHhcCCCCEEEE
Confidence            688888888999999999999999988554 444444444443  344555554  44433 467777877666677776


Q ss_pred             eCCc
Q psy12833         84 NCAG   87 (254)
Q Consensus        84 ~~ag   87 (254)
                      ..+-
T Consensus        79 lt~~   82 (121)
T d1ys7a2          79 LSAR   82 (121)
T ss_dssp             EECC
T ss_pred             EEee
Confidence            6553

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=83.13  E-value=1.5  Score=33.20  Aligned_cols=73  Identities=12%  Similarity=0.044  Sum_probs=49.8

Q ss_pred             cEEEEeC-CCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHH---hC-CCceEEecCCCCHHHHHHHHHHHHHHcCCC
Q psy12833          5 VVGLVTG-GASGLGKATVERIVREGGRVVLCDLPTSEGESVAKE---LG-PDVKFAPVDVTSEEDVQKAVLLCKDSFGKL   79 (254)
Q Consensus         5 ~~~lItG-as~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i   79 (254)
                      .++|=.| |||-||.+++..+  ..++|+.++.+...++-..+.   ++ .++.++..|+-+.-         .  ..++
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~---------~--~~~f  176 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---------A--GQQF  176 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---------T--TCCE
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc---------C--CCce
Confidence            3566667 4667777776654  357999999988776655443   34 36999999986531         1  1479


Q ss_pred             cEEEeCCccCC
Q psy12833         80 DVNVNCAGISC   90 (254)
Q Consensus        80 d~li~~ag~~~   90 (254)
                      |++|.|.-...
T Consensus       177 DlIvsNPPYi~  187 (274)
T d2b3ta1         177 AMIVSNPPYID  187 (274)
T ss_dssp             EEEEECCCCBC
T ss_pred             eEEEecchhhh
Confidence            99999976543

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=83.01  E-value=4.1  Score=30.98  Aligned_cols=28  Identities=14%  Similarity=0.031  Sum_probs=21.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEe
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLC   34 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~   34 (254)
                      .+|+..+|..|.+++..-+..|.+++++
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~   98 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKII   98 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEE
T ss_pred             eeeeeccchhhHHHHHhhcccccceeec
Confidence            4777888888888888887888765443

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.00  E-value=1.4  Score=31.73  Aligned_cols=73  Identities=19%  Similarity=0.062  Sum_probs=41.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC------CchhHHHHHHhCCCce----EEecCCCCHHHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLP------TSEGESVAKELGPDVK----FAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~------~~~~~~~~~~~~~~~~----~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++++.| ++-.|..+.+.|.+.|++|+.+-..      .......+.+.+..+.    ...-+..+++    +++.+.+.
T Consensus         2 kI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p~~~~~~~~v~~~a~~~~ipv~~~~~~~~~~~~~~~----~~~~l~~~   76 (203)
T d2bw0a2           2 KIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPD----VVAKYQAL   76 (203)
T ss_dssp             EEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHH----HHHHHHTT
T ss_pred             EEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCCCcCcCCChhhhhHHhcCCcccccccccccccccHH----HHHHHHHh
Confidence            355554 4679999999999999998754321      1233344444443322    1223444444    34444443


Q ss_pred             cCCCcEEEeC
Q psy12833         76 FGKLDVNVNC   85 (254)
Q Consensus        76 ~~~id~li~~   85 (254)
                        ++|++|..
T Consensus        77 --~~Dliv~~   84 (203)
T d2bw0a2          77 --GAELNVLP   84 (203)
T ss_dssp             --CCSEEEES
T ss_pred             --CCCceEEe
Confidence              78987764

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.95  E-value=3.9  Score=29.17  Aligned_cols=71  Identities=15%  Similarity=0.068  Sum_probs=42.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEee-CCC--------chhHHHHHHhCCCceEEe-cCCCCHHHHHHHHHHHHHH
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCD-LPT--------SEGESVAKELGPDVKFAP-VDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~-r~~--------~~~~~~~~~~~~~~~~~~-~Dls~~~~~~~~~~~~~~~   75 (254)
                      ++++. |++..|..+.+.|.+.|++|..+- +..        ....+.+++.+  +.++. -++.+++    +++.+.+.
T Consensus         2 kiv~~-~~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~--i~~~~~~~~~~~~----~~~~i~~~   74 (203)
T d2blna2           2 KTVVF-AYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERG--IPVYAPDNVNHPL----WVERIAQL   74 (203)
T ss_dssp             EEEEE-ECHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHT--CCEECCSCCCSHH----HHHHHHHT
T ss_pred             eEEEE-ecCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcC--Ccceecccccchh----hhhhhhhh
Confidence            34555 557799999999999999986543 222        22344444444  33333 4666654    33444433


Q ss_pred             cCCCcEEEeC
Q psy12833         76 FGKLDVNVNC   85 (254)
Q Consensus        76 ~~~id~li~~   85 (254)
                        ++|++|..
T Consensus        75 --~~Dlii~~   82 (203)
T d2blna2          75 --SPDVIFSF   82 (203)
T ss_dssp             --CCSEEEEE
T ss_pred             --cccceeee
Confidence              78987654

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.95  E-value=0.54  Score=36.07  Aligned_cols=33  Identities=9%  Similarity=0.205  Sum_probs=28.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCc
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      -++|.|| |--|..+|.+|+++|.+|.++.++..
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            5889988 88899999999999999999987654

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.73  E-value=0.87  Score=32.92  Aligned_cols=36  Identities=14%  Similarity=0.193  Sum_probs=30.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      ++||+|+|.|++ --|-.+|..+++.++.++.+.|+.
T Consensus        30 ~~gK~V~VvG~G-~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          30 FSGQRVGVIGTG-SSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CBTCEEEEECCS-HHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCEEEEECCC-ccHHHHHHHHHhhhcccccccccc
Confidence            579999999874 468999999999999988887764

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.19  E-value=2.5  Score=34.96  Aligned_cols=71  Identities=14%  Similarity=0.049  Sum_probs=50.7

Q ss_pred             CcEEEEeCC-CChHHHHHHHHHH-HcCCEEEEeeCCC--chhHHHH--HHhCCCceEEecCCCCHHHHHHHHHHHHHH
Q psy12833          4 GVVGLVTGG-ASGLGKATVERIV-REGGRVVLCDLPT--SEGESVA--KELGPDVKFAPVDVTSEEDVQKAVLLCKDS   75 (254)
Q Consensus         4 ~~~~lItGa-s~giG~a~a~~l~-~~g~~v~~~~r~~--~~~~~~~--~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~   75 (254)
                      +|.+.|.|| ||..|.|.+..+. .++.+|++..-+.  +..++.+  ...+.+++.+.+| .+.|+++.+++++...
T Consensus       150 ~~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~-G~fDDcq~~vk~~f~d  226 (511)
T d1kl7a_         150 KKQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT-GTFDNCQDIVKAIFGD  226 (511)
T ss_dssp             CCCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred             CceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEec-cChHHHHHHHHHHHhh
Confidence            455666555 6789999999997 4467888776542  2333222  2226789999998 6899999999999874

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=82.16  E-value=0.79  Score=33.38  Aligned_cols=32  Identities=16%  Similarity=0.267  Sum_probs=26.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEeeCCC
Q psy12833          6 VGLVTGGASGLGKATVERIVREGG-RVVLCDLPT   38 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~-~v~~~~r~~   38 (254)
                      .|+|.|| |--|...|..|+++|. +|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4788888 7788899999999996 699987754

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.95  E-value=0.79  Score=35.19  Aligned_cols=31  Identities=26%  Similarity=0.293  Sum_probs=26.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          7 GLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         7 ~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      |+|.|| |--|.+.|.+|+++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            678887 6778999999999999999997654

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.88  E-value=1.2  Score=29.65  Aligned_cols=35  Identities=17%  Similarity=0.037  Sum_probs=28.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHH----HcCCEEEEeeCCCc
Q psy12833          4 GVVGLVTGGASGLGKATVERIV----REGGRVVLCDLPTS   39 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~----~~g~~v~~~~r~~~   39 (254)
                      .|+++|.|| |.+|-.+|..|+    +.|.+|+++.+...
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            578899987 899988888885    35899999887544

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.77  E-value=0.69  Score=32.61  Aligned_cols=69  Identities=10%  Similarity=-0.003  Sum_probs=44.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEE-EeeCCCchhHHHHHHhCCC--ceEEecCCCCHHHHHHHHHHHHHHcCCCcE
Q psy12833          6 VGLVTGGASGLGKATVERIVRE-GGRVV-LCDLPTSEGESVAKELGPD--VKFAPVDVTSEEDVQKAVLLCKDSFGKLDV   81 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~-g~~v~-~~~r~~~~~~~~~~~~~~~--~~~~~~Dls~~~~~~~~~~~~~~~~~~id~   81 (254)
                      ++.|.|+ |.+|+..++.|... +++|+ +++++.++++++.++.+..  ..++    +|   ++++++.     ..+|+
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~---~~~ll~~-----~~iD~   69 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GS---YESLLED-----PEIDA   69 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SS---HHHHHHC-----TTCCE
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----Cc---HHHhhhc-----cccce
Confidence            4677786 67899988888765 56776 5688888777777765421  2221    23   3344432     36899


Q ss_pred             EEeCCc
Q psy12833         82 NVNCAG   87 (254)
Q Consensus        82 li~~ag   87 (254)
                      ++.+..
T Consensus        70 v~I~tp   75 (184)
T d1ydwa1          70 LYVPLP   75 (184)
T ss_dssp             EEECCC
T ss_pred             eeeccc
Confidence            887654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=81.52  E-value=1.1  Score=26.89  Aligned_cols=35  Identities=20%  Similarity=0.045  Sum_probs=30.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCch
Q psy12833          5 VVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSE   40 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~   40 (254)
                      |++.|.|+ |-+|+-++..-.+.|.++++.+.+.+.
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            78999998 889999999999999999999876543

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=81.52  E-value=0.46  Score=35.71  Aligned_cols=34  Identities=15%  Similarity=0.244  Sum_probs=27.6

Q ss_pred             cEEEEeCCCChHHH-----HHHHHHHHcCCEEEEeeCCCc
Q psy12833          5 VVGLVTGGASGLGK-----ATVERIVREGGRVVLCDLPTS   39 (254)
Q Consensus         5 ~~~lItGas~giG~-----a~a~~l~~~g~~v~~~~r~~~   39 (254)
                      |++.|+| =||.|+     .++..|+++|++|.+++.+..
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            6888998 788886     456688999999999998753

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.41  E-value=5.7  Score=30.35  Aligned_cols=42  Identities=26%  Similarity=0.266  Sum_probs=26.6

Q ss_pred             cEEEEeCCCCh-H--HHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh
Q psy12833          5 VVGLVTGGASG-L--GKATVERIVREGGRVVLCDLPTSEGESVAKEL   48 (254)
Q Consensus         5 ~~~lItGas~g-i--G~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   48 (254)
                      |.++.++||+| +  ..+++++|.++|++|++++.  +...+..++.
T Consensus         2 kil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~--~~~~~~v~~~   46 (401)
T d1iira_           2 RVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP--PDCAERLAEV   46 (401)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEEC--GGGHHHHHHT
T ss_pred             EEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeC--cchHHHHHHc
Confidence            44444555532 2  35799999999999998763  3444444443

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.35  E-value=2  Score=30.27  Aligned_cols=71  Identities=14%  Similarity=0.071  Sum_probs=48.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHh------CCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          3 KGVVGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKEL------GPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         3 ~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      +++++|=.|++.|   .++..|++.+.+|+.++.++...+...+.+      ..++.++.+|+.+.-         .  -
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~---------~--~  117 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV---------K--D  117 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC---------T--T
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh---------c--c
Confidence            5788998997666   334456677889999999877666554432      345788888875421         1  1


Q ss_pred             CCCcEEEeCCc
Q psy12833         77 GKLDVNVNCAG   87 (254)
Q Consensus        77 ~~id~li~~ag   87 (254)
                      +..|+++.|..
T Consensus       118 ~~fD~Ii~~~p  128 (194)
T d1dusa_         118 RKYNKIITNPP  128 (194)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCceEEEEccc
Confidence            37899998754

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=81.26  E-value=4.4  Score=26.83  Aligned_cols=83  Identities=13%  Similarity=0.004  Sum_probs=49.2

Q ss_pred             CCcEEEEeCCCC---hHHHHHHHHHHHcCCEEEEeeCCCc--hh-----HHHHHHhCCCceEEecCCCCHHHHHHHHHHH
Q psy12833          3 KGVVGLVTGGAS---GLGKATVERIVREGGRVVLCDLPTS--EG-----ESVAKELGPDVKFAPVDVTSEEDVQKAVLLC   72 (254)
Q Consensus         3 ~~~~~lItGas~---giG~a~a~~l~~~g~~v~~~~r~~~--~~-----~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~   72 (254)
                      +.|++.|.|+|.   ..|..+.+.|.+.|++++.+.-+..  ..     -....++...+..+.+-+ .++.+.++++++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v~~-p~~~v~~~v~~~   90 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFR-PPSALMDHLPEV   90 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECS-CHHHHTTTHHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEEec-cHHHHHHHHHHH
Confidence            458999999985   6999999999999999887754321  00     000112223333333322 456666666666


Q ss_pred             HHHcCCCcEEEeCCcc
Q psy12833         73 KDSFGKLDVNVNCAGI   88 (254)
Q Consensus        73 ~~~~~~id~li~~ag~   88 (254)
                      .+.  ++..++...|.
T Consensus        91 ~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          91 LAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHH--CCSCEEECTTC
T ss_pred             Hhh--CCCeEEEecCc
Confidence            554  34445555554

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=81.20  E-value=1.9  Score=29.57  Aligned_cols=74  Identities=14%  Similarity=0.231  Sum_probs=39.5

Q ss_pred             CCCCcEEEEeCCCChHHHHH-HHHHHHc-CCEEEE-eeCCCc-hhHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHHHc
Q psy12833          1 MLKGVVGLVTGGASGLGKAT-VERIVRE-GGRVVL-CDLPTS-EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSF   76 (254)
Q Consensus         1 ml~~~~~lItGas~giG~a~-a~~l~~~-g~~v~~-~~r~~~-~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~   76 (254)
                      |.+--++-|.| +|++|... .+.|.+. ..+++. ++|+.+ ......++.+..+  . .     ++++.+.+..  .+
T Consensus         1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~--~-~-----~~~d~l~~~~--~~   69 (157)
T d1nvmb1           1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTT--T-Y-----AGVEGLIKLP--EF   69 (157)
T ss_dssp             CCSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCE--E-S-----SHHHHHHHSG--GG
T ss_pred             CCCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcc--c-c-----cceeeeeecc--cc
Confidence            44444788999 89999865 4555443 346654 566654 3334444443221  1 1     1233333322  22


Q ss_pred             CCCcEEEeC
Q psy12833         77 GKLDVNVNC   85 (254)
Q Consensus        77 ~~id~li~~   85 (254)
                      ..+|+++.+
T Consensus        70 ~~iDiVf~A   78 (157)
T d1nvmb1          70 ADIDFVFDA   78 (157)
T ss_dssp             GGEEEEEEC
T ss_pred             cccCEEEEc
Confidence            368998765

>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Escherichia coli [TaxId: 562]

Probab=81.10  E-value=4.9  Score=25.67  Aligned_cols=77  Identities=19%  Similarity=0.074  Sum_probs=52.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCCchhHHHHHHhCCCceEEecCCC--CHHHHHHHHHHHHHHcCCCcEEE
Q psy12833          6 VGLVTGGASGLGKATVERIVREGGRVVLCDLPTSEGESVAKELGPDVKFAPVDVT--SEEDVQKAVLLCKDSFGKLDVNV   83 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dls--~~~~~~~~~~~~~~~~~~id~li   83 (254)
                      ++||.--..-+...+...|.+.|++|.. +.+.+++.+..++.  ++..+-+|+.  +.+.+ ++++++.+....+-+++
T Consensus         2 rILvVDDd~~~~~~l~~~L~~~G~~v~~-a~~g~eal~~l~~~--~~dliilD~~mP~~~G~-e~~~~i~~~~~~~pvi~   77 (119)
T d2pl1a1           2 RVLVVEDNALLRHHLKVQIQDAGHQVDD-AEDAKEADYYLNEH--IPDIAIVDLGLPDEDGL-SLIRRWRSNDVSLPILV   77 (119)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEE-ESSHHHHHHHHHHS--CCSEEEECSCCSSSCHH-HHHHHHHHTTCCSCEEE
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEEE-ECCHHHHHHHHHhc--ccceeehhccCCCchhH-HHHHHHHhcCcccceEe
Confidence            5888888889999999999999999875 44444444444443  3445555544  55544 57778877766666766


Q ss_pred             eCC
Q psy12833         84 NCA   86 (254)
Q Consensus        84 ~~a   86 (254)
                      ..+
T Consensus        78 lt~   80 (119)
T d2pl1a1          78 LTA   80 (119)
T ss_dssp             EES
T ss_pred             eec
Confidence            654

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.97  E-value=1.5  Score=30.26  Aligned_cols=36  Identities=19%  Similarity=0.277  Sum_probs=32.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCC
Q psy12833          2 LKGVVGLVTGGASGLGKATVERIVREGGRVVLCDLP   37 (254)
Q Consensus         2 l~~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~   37 (254)
                      ++|+++++.|-.+.+.++++..|.+.|+++.+++-.
T Consensus         2 l~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           2 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            689999999999999999999999999999988764

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.19  E-value=1.1  Score=34.57  Aligned_cols=34  Identities=21%  Similarity=0.199  Sum_probs=27.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC--CEEEEeeCCCc
Q psy12833          5 VVGLVTGGASGLGKATVERIVREG--GRVVLCDLPTS   39 (254)
Q Consensus         5 ~~~lItGas~giG~a~a~~l~~~g--~~v~~~~r~~~   39 (254)
                      |+|+|.|| |--|.++|..|+++|  .+|++..|+..
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            78999998 667778888898877  58999888753

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.02  E-value=0.73  Score=32.62  Aligned_cols=34  Identities=9%  Similarity=-0.041  Sum_probs=28.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCEEEEeeCCC
Q psy12833          4 GVVGLVTGGASGLGKATVERIVREGGRVVLCDLPT   38 (254)
Q Consensus         4 ~~~~lItGas~giG~a~a~~l~~~g~~v~~~~r~~   38 (254)
                      ++.++|.|| |..|...|..+++.|.+++++.+..
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            478999998 5688999999999999999887643

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.01  E-value=1.1  Score=31.55  Aligned_cols=31  Identities=19%  Similarity=0.178  Sum_probs=25.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEE-EeeC
Q psy12833          6 VGLVTGGASGLGKATVERIVRE-GGRVV-LCDL   36 (254)
Q Consensus         6 ~~lItGas~giG~a~a~~l~~~-g~~v~-~~~r   36 (254)
                      +|.|.||||-.|..+.+.|.++ ..++. +.++
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~   35 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVS   35 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEee
Confidence            7999999999999999999998 45664 3443