Psyllid ID: psy12854

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
MPIFGTKTVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSSEVFRRFRGRDPCFKPFLDMFRLN
ccccccccEEccEEEEEcccccccccccccccccHHHHHHHHHcHHHHHHcccccccccccccccccccEEccHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHcccccccHHHHHHcccc
ccccccccEEcEEEEEEEcccccccccccEcccHHHHHHHHHHcccHHHHEEEEcccccccccccccccEEccHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHEEEccccccccccccHHHHEccccHHcHHHHHHHHHHHHHHHHHHHHHccccHHHHHccHHHHHcccccccHHHHHHHHHHHHHccccccHHHHHHHHccccccHHHHHHHcccc
mpifgtktvitpLNTLilnltepqygkpclltfKQVENLFFHFGSLLQRsltathysdvsgvnnvewdSVYIINYFLTHFLYEERVFAELNShfatgeklKMTDEQLKALRAHNAGIDVCSELFKANLdlqlhngpkphwseisrelyplhfgfpidkysnlpcrfvevgsgdlaAGYYSFLWSKLVSADIFYAFkedgegrledesgrsdsgvsggertepnvgsrlrdtfltfggschssEVFRrfrgrdpcfkpfldmfrln
mpifgtktvitplnTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKEdgegrledesgrsdsgvsggertepnvgsrlrDTFLTFGGSCHssevfrrfrgrdpcfkpfldmfrln
MPIFGTKtvitplntlilnltEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSSEVFRRFRGRDPCFKPFLDMFRLN
**IFGTKTVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFK********************************RDTFLTFGGSCHSSEVFRRFRGRDPCFKPFLDMF***
*******TVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSSEVFRRFRGRDPCFKPFLDMFRL*
MPIFGTKTVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKEDGE**********************NVGSRLRDTFLTFGGSCHSSEVFRRFRGRDPCFKPFLDMFRLN
****GTKTVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKEDGEGR***ESGRSDS**SGGERTEPNVGSRLRDTFLTFGGSCHSSEVFRRFRGRDPCFKPFLDMF***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MPIFGTKTVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSSEVFRRFRGRDPCFKPFLDMFRLN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query265 2.2.26 [Sep-21-2011]
P44573681 Oligopeptidase A OS=Haemo yes N/A 0.879 0.342 0.307 9e-26
P27237680 Oligopeptidase A OS=Salmo yes N/A 0.890 0.347 0.303 1e-25
P27298680 Oligopeptidase A OS=Esche N/A N/A 0.890 0.347 0.3 1e-25
Q8C1A5687 Thimet oligopeptidase OS= yes N/A 0.837 0.323 0.272 1e-17
P24155687 Thimet oligopeptidase OS= yes N/A 0.837 0.323 0.272 2e-17
P52888689 Thimet oligopeptidase OS= yes N/A 0.837 0.322 0.268 3e-17
Q1JPJ8687 Thimet oligopeptidase OS= yes N/A 0.833 0.321 0.271 9e-17
P47788687 Thimet oligopeptidase OS= yes N/A 0.837 0.323 0.272 2e-16
Q02038704 Neurolysin, mitochondrial no N/A 0.852 0.321 0.266 1e-13
Q54DD2673 Thimet-like oligopeptidas yes N/A 0.875 0.344 0.281 4e-13
>sp|P44573|OPDA_HAEIN Oligopeptidase A OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=prlC PE=3 SV=1 Back     alignment and function desciption
 Score =  117 bits (293), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 24/257 (9%)

Query: 8   TVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEW 67
           ++ TP+  L  N   P   KP L T  +V  LF  FG  +   LT    SDV+G+N V W
Sbjct: 437 SIETPVAYLTCNFNAPIGNKPALFTHNEVTTLFHEFGHGIHHMLTQIDVSDVAGINGVPW 496

Query: 68  DSVYIINYFLTHFLYEERVFAELNSHFATGEKL-KMTDEQLKALRAHNAGIDVCSELFKA 126
           D+V + + F+ ++ +EE   A ++ H+ TGE L K    QL   +   A + +  +L   
Sbjct: 497 DAVELPSQFMENWCWEEEALAFISGHYETGEPLPKEKLTQLLKAKNFQAAMFILRQLEFG 556

Query: 127 NLDLQLHNG-PKPHWSEISRELYPLHFGFPIDK---YSNLPCRFVEVGSGDLAAGYYSFL 182
             D +LH+       ++I   L  +     + K   ++  P  F  + +G  AAGYYS+L
Sbjct: 557 IFDFRLHHTFDAEKTNQILDTLKSVKSQVAVIKGVDWARAPHSFSHIFAGGYAAGYYSYL 616

Query: 183 WSKLVSADIFYAFKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSS 242
           W++++SAD +  F+E+G                      P  G    D  LT GGS    
Sbjct: 617 WAEVLSADAYSRFEEEG-------------------IFNPITGKSFLDEILTRGGSEEPM 657

Query: 243 EVFRRFRGRDPCFKPFL 259
           E+F+RFRGR+P     L
Sbjct: 658 ELFKRFRGREPQLDALL 674
May play a specific role in the degradation of signal peptides after they are released from precursor forms of secreted proteins. Can cleave N-acetyl-L-Ala(4).
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 7EC: 0
>sp|P27237|OPDA_SALTY Oligopeptidase A OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=prlC PE=1 SV=1 Back     alignment and function description
>sp|P27298|OPDA_ECOLI Oligopeptidase A OS=Escherichia coli (strain K12) GN=prlC PE=3 SV=3 Back     alignment and function description
>sp|Q8C1A5|THOP1_MOUSE Thimet oligopeptidase OS=Mus musculus GN=Thop1 PE=1 SV=1 Back     alignment and function description
>sp|P24155|THOP1_RAT Thimet oligopeptidase OS=Rattus norvegicus GN=Thop1 PE=1 SV=4 Back     alignment and function description
>sp|P52888|THOP1_HUMAN Thimet oligopeptidase OS=Homo sapiens GN=THOP1 PE=1 SV=2 Back     alignment and function description
>sp|Q1JPJ8|THOP1_BOVIN Thimet oligopeptidase OS=Bos taurus GN=THOP1 PE=2 SV=3 Back     alignment and function description
>sp|P47788|THOP1_PIG Thimet oligopeptidase OS=Sus scrofa GN=THOP1 PE=2 SV=2 Back     alignment and function description
>sp|Q02038|NEUL_PIG Neurolysin, mitochondrial OS=Sus scrofa GN=NLN PE=1 SV=1 Back     alignment and function description
>sp|Q54DD2|THOPL_DICDI Thimet-like oligopeptidase OS=Dictyostelium discoideum GN=DDB_G0292362 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query265
193582327 725 PREDICTED: oligopeptidase A-like [Acyrth 0.860 0.314 0.418 2e-53
347963460 763 AGAP000252-PA [Anopheles gambiae str. PE 0.879 0.305 0.420 8e-51
170051681 741 oligopeptidase A [Culex quinquefasciatus 0.894 0.319 0.423 4e-49
189235813 725 PREDICTED: similar to oligopeptidase [Tr 0.860 0.314 0.419 2e-47
270004671 1084 hypothetical protein TcasGA2_TC010332 [T 0.860 0.210 0.419 2e-47
157123352 736 oligopeptidase [Aedes aegypti] gi|108884 0.860 0.309 0.422 4e-47
357629137 653 putative oligopeptidase [Danaus plexippu 0.920 0.373 0.404 7e-47
312379604 754 hypothetical protein AND_08495 [Anophele 0.845 0.297 0.419 7e-47
332376601 725 unknown [Dendroctonus ponderosae] 0.886 0.324 0.417 5e-46
307214741 734 Oligopeptidase A [Harpegnathos saltator] 0.875 0.316 0.384 6e-46
>gi|193582327|ref|XP_001945759.1| PREDICTED: oligopeptidase A-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/251 (41%), Positives = 160/251 (63%), Gaps = 23/251 (9%)

Query: 10  ITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDS 69
           + PL  LI+N    Q   P LL+F QV+ LF  FG LLQ  L   HY++VSG++NVEWD+
Sbjct: 486 VLPLTALIMNFPSMQNKNPSLLSFDQVKILFGKFGHLLQNVLCQVHYAEVSGLSNVEWDA 545

Query: 70  VYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHNAGIDVCSELFKANLD 129
           V I + F+ H+LY++  F  +NSH+ TG++L   ++QL  ++ H AG + C EL+K+ +D
Sbjct: 546 VGITSNFMIHWLYDKDTFDSINSHYKTGKRL--PNDQLTEMKQHMAGFNTCDELYKSMID 603

Query: 130 LQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDL-AAGYYSFLWSKLVS 188
           +++H   K +W+++ +E++  ++GFP+ K+++ PCRF EV S +  AA YYS LWS++++
Sbjct: 604 IKMHT-IKTNWNDLVKEMWSNYYGFPLSKWNSFPCRFAEVMSNEQGAASYYSGLWSRIIA 662

Query: 189 ADIFYAFKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSSEVFRRF 248
           AD+F +FK   E                   T  N+G+  RDTF  FGGSC S E+FRRF
Sbjct: 663 ADVFQSFKAPDE-------------------TTKNLGNNFRDTFFAFGGSCPSGEIFRRF 703

Query: 249 RGRDPCFKPFL 259
           +GRDP  + F+
Sbjct: 704 KGRDPNPEAFI 714

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|347963460|ref|XP_310873.5| AGAP000252-PA [Anopheles gambiae str. PEST] gi|333467189|gb|EAA06437.5| AGAP000252-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|170051681|ref|XP_001861876.1| oligopeptidase A [Culex quinquefasciatus] gi|167872832|gb|EDS36215.1| oligopeptidase A [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|189235813|ref|XP_971989.2| PREDICTED: similar to oligopeptidase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270004671|gb|EFA01119.1| hypothetical protein TcasGA2_TC010332 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|157123352|ref|XP_001660130.1| oligopeptidase [Aedes aegypti] gi|108884523|gb|EAT48748.1| AAEL000231-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|357629137|gb|EHJ78104.1| putative oligopeptidase [Danaus plexippus] Back     alignment and taxonomy information
>gi|312379604|gb|EFR25825.1| hypothetical protein AND_08495 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|332376601|gb|AEE63440.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|307214741|gb|EFN89661.1| Oligopeptidase A [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query265
FB|FBgn0039252730 CG11771 [Drosophila melanogast 0.660 0.239 0.368 1.7e-37
TAIR|locus:2142484701 AT5G10540 [Arabidopsis thalian 0.833 0.315 0.336 8.2e-26
TAIR|locus:2155705791 AT5G65620 [Arabidopsis thalian 0.833 0.279 0.336 8.4e-26
UNIPROTKB|P27298680 prlC [Escherichia coli K-12 (t 0.830 0.323 0.308 6.3e-23
TIGR_CMR|SO_4699679 SO_4699 "oligopeptidase A" [Sh 0.803 0.313 0.303 1.6e-21
UNIPROTKB|Q9KVF8680 VC0188 "Oligopeptidase A" [Vib 0.781 0.304 0.319 2e-21
TIGR_CMR|VC_0188680 VC_0188 "oligopeptidase A" [Vi 0.781 0.304 0.319 2e-21
TIGR_CMR|CBU_0039677 CBU_0039 "oligopeptidase A" [C 0.792 0.310 0.285 2.2e-19
ZFIN|ZDB-GENE-040718-47707 zgc:92139 "zgc:92139" [Danio r 0.652 0.244 0.289 2.9e-18
UNIPROTKB|J9JIN0690 LOC100623428 "Uncharacterized 0.652 0.250 0.284 1.1e-17
FB|FBgn0039252 CG11771 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 330 (121.2 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
 Identities = 66/179 (36%), Positives = 112/179 (62%)

Query:    22 EPQY--GKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTH 79
             EPQ    KP LL +  ++ LF  FGS LQ  LT   YSD++G++N+EWD+  +  + +++
Sbjct:   493 EPQSPDAKPPLLGYDDLQMLFKTFGSGLQHLLTQAGYSDLAGLSNIEWDASQVSGHVMSN 552

Query:    80 FLYEERVFAELNSHFATGEKLKMT-DEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKP 138
             FL +  V   L+ HF++GE L+    ++++ L+   AG ++C +L+ A+LD++LH     
Sbjct:   553 FLDDPTVIRSLSGHFSSGEPLEAELSQKMRLLKTQLAGYNLCQDLYLADLDVELHRS-NA 611

Query:   139 HWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKE 197
              W E+ R+L+P++   P+DK    PC   ++ +GD AA  +S L+S+L++ADI  +F E
Sbjct:   612 FWLEVVRKLWPVYQCMPLDKKDAHPCSLTDIFAGDWAAAQFSHLYSRLIAADISSSFAE 670
GO:0004222 "metalloendopeptidase activity" evidence=ISS
GO:0006508 "proteolysis" evidence=IEA
TAIR|locus:2142484 AT5G10540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155705 AT5G65620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P27298 prlC [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_4699 SO_4699 "oligopeptidase A" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KVF8 VC0188 "Oligopeptidase A" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0188 VC_0188 "oligopeptidase A" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0039 CBU_0039 "oligopeptidase A" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-47 zgc:92139 "zgc:92139" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|J9JIN0 LOC100623428 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.24LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
cd09605590 cd09605, M3A, Peptidase M3A family includes Thimet 1e-43
pfam01432450 pfam01432, Peptidase_M3, Peptidase family M3 8e-41
COG0339683 COG0339, Dcp, Zn-dependent oligopeptidases [Amino 2e-38
cd06456654 cd06456, M3A_DCP, Peptidase family M3 dipeptidyl c 4e-35
cd06455637 cd06455, M3A_TOP, Peptidase M3 Thimet oligopeptida 9e-32
PRK10911680 PRK10911, PRK10911, oligopeptidase A; Provisional 5e-30
cd06457606 cd06457, M3A_MIP, Peptidase M3 mitochondrial inter 2e-18
PRK10280681 PRK10280, PRK10280, dipeptidyl carboxypeptidase II 3e-17
cd06258400 cd06258, M3_like, Peptidase M3-like family, a zinc 0.003
>gnl|CDD|189012 cd09605, M3A, Peptidase M3A family includes Thimet oligopeptidase, dipeptidyl carboxypeptidase and mitochondrial intermediate peptidase Back     alignment and domain information 
 Score =  155 bits (394), Expect = 1e-43
 Identities = 81/264 (30%), Positives = 114/264 (43%), Gaps = 39/264 (14%)

Query: 8   TVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEW 67
           +   P+  L+ N T+P  GKP LLT  +VE LF  FG  L   L+ T Y  +SG   VE 
Sbjct: 351 SRQLPVAALVCNFTKPTGGKPALLTHDEVETLFHEFGHALHGLLSRTKYPSLSG-TRVER 409

Query: 68  D-----SVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAH---NAGIDV 119
           D     S       + ++ ++  V      H+ TGE   + DE ++ L A    N G+  
Sbjct: 410 DFVELPSQ-----LMENWAWDPEVLKLFARHYETGEP--LPDELVEKLIAARNFNQGLAT 462

Query: 120 CSELFKANLDLQLHNGPKPHWSEIS----RELYPLHFGFPIDKYSNLPCRFVEVGSGDLA 175
             +L  A LDL LH+   P   +        L       P    +     F  +  G  A
Sbjct: 463 LRQLAFALLDLALHSLDPPEDGDDVTFELAALREEGLPVPPVPGTYFQASFGHLFGGGYA 522

Query: 176 AGYYSFLWSKLVSADIFYAFKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTF 235
           AGYYS+LW+++++AD F AF E G          +              G R RD  L+ 
Sbjct: 523 AGYYSYLWAEVLAADAFSAFFEAG--------PLN-----------RETGERFRDEILSP 563

Query: 236 GGSCHSSEVFRRFRGRDPCFKPFL 259
           GGS    E+FR F GR+P  +  L
Sbjct: 564 GGSKDPMELFRDFLGREPSIEALL 587

The peptidase M3-like family, also called neurolysin-like family, is part of the "zincins" metallopeptidases, and includes M3, M2 and M32 families of metallopeptidases. The M3 family is subdivided into two subfamilies: the widespread M3A, which comprises a number of high-molecular mass endo- and exopeptidases from bacteria, archaea, protozoa, fungi, plants and animals, and the small M3B, whose members are enzymes primarily from bacteria. Well-known mammalian/eukaryotic M3A endopeptidases are the thimet oligopeptidase (TOP; endopeptidase 3.4.24.15), neurolysin (alias endopeptidase 3.4.24.16), and the mitochondrial intermediate peptidase. The first two are intracellular oligopeptidases, which act only on relatively short substrates of less than 20 amino acid residues, while the latter cleaves N-terminal octapeptides from proteins during their import into the mitochondria. The M3A subfamily also contains several bacterial endopeptidases, collectively called oligopeptidases A, as well as a large number of bacterial carboxypeptidases, called dipeptidyl peptidases (Dcp; Dcp II; peptidyl dipeptidase; EC 3.4.15.5). The peptidases in the M3 family contain the HEXXH motif that forms the active site in conjunction with a C-terminally-located Glutamic acid (Glu) residue. A single zinc ion is ligated by the side-chains of the two Histidine (His) residues, and the more C-terminal Glu. Most of the peptidases are synthesized without signal peptides or propeptides, and function intracellularly. The structure of neurolysin shows similarities to those of angiotensin-converting enzyme (ACE; peptidyl-dipeptidase A) peptidase unit 2 belonging to peptidase family M2. ACE is an enzyme responsible for cleavage of dipeptides from the C-termini of proteins, notably converting angiotensin I to angiotensin II in mammals. There are similarities to the thermostable carboxypeptidases from Pyrococcus furiosus carboxypeptidase (PfuCP), and Thermus aquaticus (TaqCP), belonging to peptidase family M32. Little is known about function of this family, including carboxypeptidases Taq and Pfu. Length = 590
>gnl|CDD|216500 pfam01432, Peptidase_M3, Peptidase family M3 Back     alignment and domain information
>gnl|CDD|223416 COG0339, Dcp, Zn-dependent oligopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|188995 cd06456, M3A_DCP, Peptidase family M3 dipeptidyl carboxypeptidase (DCP) Back     alignment and domain information
>gnl|CDD|188994 cd06455, M3A_TOP, Peptidase M3 Thimet oligopeptidase (TOP) also includes neurolysin Back     alignment and domain information
>gnl|CDD|182832 PRK10911, PRK10911, oligopeptidase A; Provisional Back     alignment and domain information
>gnl|CDD|188996 cd06457, M3A_MIP, Peptidase M3 mitochondrial intermediate peptidase (MIP) Back     alignment and domain information
>gnl|CDD|182353 PRK10280, PRK10280, dipeptidyl carboxypeptidase II; Provisional Back     alignment and domain information
>gnl|CDD|188993 cd06258, M3_like, Peptidase M3-like family, a zincin metallopeptidase, includes M3 and M32 families Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 265
COG0339683 Dcp Zn-dependent oligopeptidases [Amino acid trans 100.0
PRK10280681 dipeptidyl carboxypeptidase II; Provisional 100.0
PRK10911680 oligopeptidase A; Provisional 100.0
KOG2089|consensus718 100.0
cd06456422 M3A_DCP_Oligopeptidase_A Peptidase family M3 dipep 100.0
cd06457458 M3A_MIP Peptidase M3 mitochondrial intermediate pe 100.0
cd06455472 M3A_TOP Peptidase M3 Thimet oligopeptidase (TOP; P 100.0
KOG2090|consensus704 100.0
PF01432458 Peptidase_M3: Peptidase family M3 This Prosite mot 100.0
cd06258365 Peptidase_M3_like The peptidase M3-like family, al 100.0
TIGR00181591 pepF oligoendopeptidase F. This family represents 100.0
TIGR02290587 M3_fam_3 oligoendopeptidase, pepF/M3 family. The M 100.0
cd06459427 M3B_Oligoendopeptidase_F Peptidase family M3B Olig 100.0
TIGR02289549 M3_not_pepF oligoendopeptidase, M3 family. This fa 99.97
COG1164598 Oligoendopeptidase F [Amino acid transport and met 99.93
cd06460396 M32_Taq Peptidase family M32 is a subclass of meta 99.76
cd06461477 M2_ACE Peptidase family M2 Angiotensin converting 99.3
PF02074494 Peptidase_M32: Carboxypeptidase Taq (M32) metallop 98.73
COG2317497 Zn-dependent carboxypeptidase [Amino acid transpor 98.28
PF01401595 Peptidase_M2: Angiotensin-converting enzyme This P 98.25
KOG3690|consensus646 97.05
COG2856213 Predicted Zn peptidase [Amino acid transport and m 92.85
PF14247220 DUF4344: Domain of unknown function (DUF4344) 88.91
PF00413154 Peptidase_M10: Matrixin This Prosite motif covers 88.78
PF06114122 DUF955: Domain of unknown function (DUF955); Inter 88.35
cd04268165 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_ 85.68
cd04279156 ZnMc_MMP_like_1 Zinc-dependent metalloprotease; MM 85.04
cd04278157 ZnMc_MMP Zinc-dependent metalloprotease, matrix me 84.81
PF13058126 DUF3920: Protein of unknown function (DUF3920) 84.29
cd04277186 ZnMc_serralysin_like Zinc-dependent metalloproteas 83.28
PF13688196 Reprolysin_5: Metallo-peptidase family M12; PDB: 2 81.95
PF05572154 Peptidase_M43: Pregnancy-associated plasma protein 81.89
PF13582124 Reprolysin_3: Metallo-peptidase family M12B Reprol 81.88
PF13583206 Reprolysin_4: Metallo-peptidase family M12B Reprol 81.81
smart00235140 ZnMc Zinc-dependent metalloprotease. Neutral zinc 81.58
PF13398200 Peptidase_M50B: Peptidase M50B-like 81.5
PF13574173 Reprolysin_2: Metallo-peptidase family M12B Reprol 81.37
>COG0339 Dcp Zn-dependent oligopeptidases [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.6e-72  Score=545.64  Aligned_cols=239  Identities=34%  Similarity=0.551  Sum_probs=227.3

Q ss_pred             CccccceEEEEeccCCCCCCCCCccCcccHHHHHhHHhHHHhHHhhcCCCCCCcccCCccchhHhhchHHHHHHhccHHH
Q psy12854          7 KTVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERV   86 (265)
Q Consensus         7 ~~~~~p~~~l~~nf~~p~~~~p~ll~~~~v~tLfHEfGHalH~lls~~~~~~~sg~~~~~~d~~E~pS~~~E~~~~~~~~   86 (265)
                      +.+|+||++++|||.+|++++|+||+|+||+||||||||+||++|++++|+.+|||+ |||||||+||||||||||+|++
T Consensus       439 ~~~q~PV~ylvCNF~~p~~gkPaLls~dEV~TLFHEfGHgLH~mlt~v~~~~vsGt~-v~wDfVElPSQ~mE~w~~~p~v  517 (683)
T COG0339         439 GGGQKPVIYLVCNFTKPVGGKPALLSHDEVTTLFHEFGHGLHHLLTRVKYPGVSGTN-VPWDFVELPSQFMENWCWEPEV  517 (683)
T ss_pred             CCcccceEEEeccCCCCCCCCCceeeHHHHHHHHHHhhhHHHHHhhcCCccccCCCC-CCcchhhccHHHHHHhhcCHHH
Confidence            458999999999999999999999999999999999999999999999999999996 9999999999999999999999


Q ss_pred             HHHHHhhhcCCcccHHH-HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCC----CcHHHHHHHHccccCCCCCCCCCC
Q psy12854         87 FAELNSHFATGEKLKMT-DEQLKALRAHNAGIDVCSELFKANLDLQLHNGPK----PHWSEISRELYPLHFGFPIDKYSN  161 (265)
Q Consensus        87 L~~ls~h~~t~~~lp~~-~~~l~~~~~~~~~~~~~~ql~~a~~D~~lh~~~~----~~~~~l~~~l~~~~~~~~~~~~~~  161 (265)
                      |..+++||+||++||++ +++++++++++.|+.++||+.+|+|||.+|...+    ..+.++.+++.++..-.+..++.+
T Consensus       518 L~~~a~Hy~TGe~lP~~ll~k~laaknf~~g~~t~rql~fal~Dm~~H~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~~~  597 (683)
T COG0339         518 LAKYARHYQTGEPLPKELLDKMLAAKNFQAGLFTLRQLEFALFDMRLHTEFDPDANADILEFEAEVLKKVAVLPSIPPRR  597 (683)
T ss_pred             HHHHHHhhccCCcCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhccCCcccccCHHHHHHHHHHHhCCCCCcchhh
Confidence            99999999999999999 9999999999999999999999999999999873    357889999998877665567788


Q ss_pred             cCccccccCCCCccCCchhhHhHHHHHHHHHHHHHHcCCCCcccccCCCCCCCCCCCCCchHHHHHHHHHHhcCCCCccH
Q psy12854        162 LPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHS  241 (265)
Q Consensus       162 ~~~~f~Hl~s~~Y~a~YYsYl~s~~~A~dv~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yR~~iL~~Ggs~~~  241 (265)
                      |+++|+|||+|||+||||||+||+|+++|.|.+|.+.|.    +|               +++|+|||+.||+.|||++|
T Consensus       598 ~~~~F~HIFagGYsAGYYSY~WaeVLsaDafa~Fee~g~----~~---------------~e~G~rfrd~ILs~GGS~dp  658 (683)
T COG0339         598 RPHSFGHIFAGGYSAGYYSYLWAEVLSADAFAAFEEEGP----FN---------------RETGQRFRDAILSRGGSRDP  658 (683)
T ss_pred             ccccccceecCcccchhHHHHHHHHHhhHHHHHHHhcCC----CC---------------HHHHHHHHHHHHhccCCcCH
Confidence            999999999999999999999999999999999999876    66               99999999999999999999


Q ss_pred             HHHHHHhhCCCCCchHHHHhcCCC
Q psy12854        242 SEVFRRFRGRDPCFKPFLDMFRLN  265 (265)
Q Consensus       242 ~e~l~~flGr~ps~~a~~~~~g~~  265 (265)
                      ++++++|+||+|+.||+|+++|+.
T Consensus       659 ~e~f~~frGrep~~dalLr~~Gl~  682 (683)
T COG0339         659 MELFKAFRGREPSIDALLRHRGLA  682 (683)
T ss_pred             HHHHHHHhcCCCChhHHHHhcCCC
Confidence            999999999999999999999974

>PRK10280 dipeptidyl carboxypeptidase II; Provisional Back     alignment and domain information
>PRK10911 oligopeptidase A; Provisional Back     alignment and domain information
>KOG2089|consensus Back     alignment and domain information
>cd06456 M3A_DCP_Oligopeptidase_A Peptidase family M3 dipeptidyl carboxypeptidase (DCP; Dcp II; peptidyl dipeptidase; EC 3 Back     alignment and domain information
>cd06457 M3A_MIP Peptidase M3 mitochondrial intermediate peptidase (MIP; EC 3 Back     alignment and domain information
>cd06455 M3A_TOP Peptidase M3 Thimet oligopeptidase (TOP; PZ-peptidase; endo-oligopeptidase A; endopeptidase 24 Back     alignment and domain information
>KOG2090|consensus Back     alignment and domain information
>PF01432 Peptidase_M3: Peptidase family M3 This Prosite motif covers only the active site Back     alignment and domain information
>cd06258 Peptidase_M3_like The peptidase M3-like family, also called neurolysin-like family, is part of the "zincins" metallopeptidases, and includes M3, M2 and M32 families of metallopeptidases Back     alignment and domain information
>TIGR00181 pepF oligoendopeptidase F Back     alignment and domain information
>TIGR02290 M3_fam_3 oligoendopeptidase, pepF/M3 family Back     alignment and domain information
>cd06459 M3B_Oligoendopeptidase_F Peptidase family M3B Oligopeptidase F (PepF; Pz-peptidase B; EC 3 Back     alignment and domain information
>TIGR02289 M3_not_pepF oligoendopeptidase, M3 family Back     alignment and domain information
>COG1164 Oligoendopeptidase F [Amino acid transport and metabolism] Back     alignment and domain information
>cd06460 M32_Taq Peptidase family M32 is a subclass of metallocarboxypeptidases which are distributed mainly in bacteria and archaea, and contain a HEXXH motif that coordinates a divalent cation such as Zn2+ or Co2+, so far only observed in the active site of neutral metallopeptidases but not in carboxypeptidases Back     alignment and domain information
>cd06461 M2_ACE Peptidase family M2 Angiotensin converting enzyme (ACE, EC 3 Back     alignment and domain information
>PF02074 Peptidase_M32: Carboxypeptidase Taq (M32) metallopeptidase; InterPro: IPR001333 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG2317 Zn-dependent carboxypeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PF01401 Peptidase_M2: Angiotensin-converting enzyme This Prosite motif covers only the active site Back     alignment and domain information
>KOG3690|consensus Back     alignment and domain information
>COG2856 Predicted Zn peptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PF14247 DUF4344: Domain of unknown function (DUF4344) Back     alignment and domain information
>PF00413 Peptidase_M10: Matrixin This Prosite motif covers only the active site Back     alignment and domain information
>PF06114 DUF955: Domain of unknown function (DUF955); InterPro: IPR010359 This is a family of bacterial and viral proteins with undetermined function Back     alignment and domain information
>cd04268 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_like subfamily Back     alignment and domain information
>cd04279 ZnMc_MMP_like_1 Zinc-dependent metalloprotease; MMP_like sub-family 1 Back     alignment and domain information
>cd04278 ZnMc_MMP Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family Back     alignment and domain information
>PF13058 DUF3920: Protein of unknown function (DUF3920) Back     alignment and domain information
>cd04277 ZnMc_serralysin_like Zinc-dependent metalloprotease, serralysin_like subfamily Back     alignment and domain information
>PF13688 Reprolysin_5: Metallo-peptidase family M12; PDB: 2FV5_B 3EWJ_A 3KME_A 3L0T_B 1BKC_E 3G42_D 2I47_D 2FV9_B 3LEA_A 1ZXC_B Back     alignment and domain information
>PF05572 Peptidase_M43: Pregnancy-associated plasma protein-A; InterPro: IPR008754 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13582 Reprolysin_3: Metallo-peptidase family M12B Reprolysin-like; PDB: 3P24_C Back     alignment and domain information
>PF13583 Reprolysin_4: Metallo-peptidase family M12B Reprolysin-like Back     alignment and domain information
>smart00235 ZnMc Zinc-dependent metalloprotease Back     alignment and domain information
>PF13398 Peptidase_M50B: Peptidase M50B-like Back     alignment and domain information
>PF13574 Reprolysin_2: Metallo-peptidase family M12B Reprolysin-like; PDB: 1KAP_P 1JIW_P 1AKL_A 1OM7_A 1OM8_A 1O0T_A 1OM6_A 1H71_P 1O0Q_A 1OMJ_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
1s4b_P674 Crystal Structure Of Human Thimet Oligopeptidase Le 2e-16
2o36_A674 Crystal Structure Of Engineered Thimet Oligopeptida 7e-16
2o3e_A678 Crystal Structure Of Engineered Neurolysin With Thi 6e-13
1i1i_P681 Neurolysin (Endopeptidase 24.16) Crystal Structure 2e-12
1y79_1680 Crystal Structure Of The E.Coli Dipeptidyl Carboxyp 5e-08
>pdb|1S4B|P Chain P, Crystal Structure Of Human Thimet Oligopeptidase Length = 674 Back     alignment and structure 
Iteration: 1

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 31/244 (12%)
Query: 22  EPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFL 81
           +P    P LL   +VE  F  FG ++ +  +   ++  SG  +VE D V   +  L +++
Sbjct: 439 KPTADAPSLLQHDEVETYFHEFGHVMHQLCSQAEFAMFSG-THVERDFVEAPSQMLENWV 497
Query: 82  YEERVFAELNSHFATGEKL-KMTDEQLKALRAHNAGIDVCSELFKANLDLQLHN----GP 136
           +E+     ++ H+ TG  + +   E+L   R  N G+    ++  A +D  LH      P
Sbjct: 498 WEQEPLLRMSRHYRTGSAVPRELLEKLIESRQANTGLFNLRQIVLAKVDQALHTQTDADP 557
Query: 137 KPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSKLVSADIFYA-F 195
              ++ + +E+     G P    +N+P  F  +  G   A YY +LWS++ S D+F+  F
Sbjct: 558 AEEYARLCQEI----LGVPATPGTNMPATFGHLAGG-YDAQYYGYLWSEVYSMDMFHTRF 612
Query: 196 KEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSSEVFRRFRGRDPCF 255
           K++G                        VG   R   L  GGS  +S + RRF GRDP  
Sbjct: 613 KQEG-------------------VLNSKVGMDYRSCILRPGGSEDASAMLRRFLGRDPKQ 653
Query: 256 KPFL 259
             FL
Sbjct: 654 DAFL 657
>pdb|2O36|A Chain A, Crystal Structure Of Engineered Thimet Oligopeptidase With Neurolysin Specificity In Neurotensin Cleavage Site Length = 674 Back     alignment and structure
>pdb|2O3E|A Chain A, Crystal Structure Of Engineered Neurolysin With Thimet Oligopeptidase Specificity For Neurotensin Cleavage Site Length = 678 Back     alignment and structure
>pdb|1I1I|P Chain P, Neurolysin (Endopeptidase 24.16) Crystal Structure Length = 681 Back     alignment and structure
>pdb|1Y79|1 Chain 1, Crystal Structure Of The E.Coli Dipeptidyl Carboxypeptidase Dcp In Complex With A Peptidic Inhibitor Length = 680 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
2o36_A674 ThiMet oligopeptidase; thermolysin-like domain, su 2e-40
2o3e_A678 Neurolysin; thermolysin-like domain, substrate-bin 6e-40
1y79_1680 Peptidyl-dipeptidase DCP; hinge bending, carboxype 6e-37
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P Length = 674 Back     alignment and structure
 Score =  146 bits (372), Expect = 2e-40
 Identities = 67/256 (26%), Positives = 110/256 (42%), Gaps = 27/256 (10%)

Query: 8   TVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEW 67
           +    +  ++ N T+P    P LL   +V   F  FG ++ +  +   ++  SG  +VE 
Sbjct: 425 SRQIAIAAMVANFTKPTADAPSLLQHDEVRTYFHEFGHVMHQLCSQAEFAMFSGT-HVET 483

Query: 68  DSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDE---QLKALRAHNAGIDVCSELF 124
           D V   +  L ++++E+     ++ H+ TG    +  E   +L   R  N G+    ++ 
Sbjct: 484 DFVEAPSQMLENWVWEQEPLLRMSRHYRTGS--AVPRELLEKLIESRQANTGLFNLRQIV 541

Query: 125 KANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWS 184
            A +D  LH       +E    L     G P    +N+P  F  +  G   A YY +LWS
Sbjct: 542 LAKVDQALHTQTDADPAEEYARLCQEILGVPATPGTNMPATFGHLAGG-YDAQYYGYLWS 600

Query: 185 KLVSADIFYA-FKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSSE 243
           ++ S D+F+  FK++G   + +                  VG   R   L  GGS  +S 
Sbjct: 601 EVYSMDMFHTRFKQEG---VLN----------------SKVGMDYRSCILRPGGSEDASA 641

Query: 244 VFRRFRGRDPCFKPFL 259
           + RRF GRDP    FL
Sbjct: 642 MLRRFLGRDPKQDAFL 657
>2o3e_A Neurolysin; thermolysin-like domain, substrate-binding channel, hydrolase; 2.20A {Rattus norvegicus} PDB: 1i1i_P Length = 678 Back     alignment and structure
>1y79_1 Peptidyl-dipeptidase DCP; hinge bending, carboxypeptidase, neurolysin, ACE, hydrolase; HET: TRP; 2.00A {Escherichia coli} Length = 680 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query265
1y79_1680 Peptidyl-dipeptidase DCP; hinge bending, carboxype 100.0
2o3e_A678 Neurolysin; thermolysin-like domain, substrate-bin 100.0
2o36_A674 ThiMet oligopeptidase; thermolysin-like domain, su 100.0
2qr4_A587 Peptidase M3B, oligoendopeptidase F; structural ge 100.0
3ce2_A618 Putative peptidase; structural genomics, unknown f 100.0
3ahn_A564 Oligopeptidase, PZ peptidase A; hydrolase, hydrola 100.0
3sks_A567 Putative oligoendopeptidase F; structural genomics 100.0
1uze_A589 Angiotensin converting enzyme; metalloprotease, in 99.87
1r42_A615 Angiotensin I converting enzyme 2; zinc metallopep 99.86
1ka2_A499 M32 carboxypeptidase; hexxh motif, M32 family, met 99.47
3nxq_A629 Angiotensin-converting enzyme; dicarboxy zinc meta 99.46
2x96_A598 Angiotensin converting enzyme; hydrolase, ACE inhi 99.12
3hq2_A501 Bacillus subtilis M32 carboxypeptidase; hydrolase, 99.03
3hoa_A509 Thermostable carboxypeptidase 1; proline-rich loop 98.85
3dwc_A505 TCMCP-1, metallocarboxypeptidase; cowrin family of 98.8
2jsd_A160 Matrix metalloproteinase-20; MMP-NNGH, structural 84.48
2xs4_A167 Karilysin protease; hydrolase, bacterial MMP, viru 83.32
2ovx_A159 Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) 82.11
1hy7_A173 Stromelysin-1, MMP-3; mixed alpha beta structure, 82.05
1cge_A168 Fibroblast collagenase; hydrolase (metalloprotease 81.37
>1y79_1 Peptidyl-dipeptidase DCP; hinge bending, carboxypeptidase, neurolysin, ACE, hydrolase; HET: TRP; 2.00A {Escherichia coli} Back     alignment and structure
Probab=100.00  E-value=1.5e-61  Score=483.48  Aligned_cols=237  Identities=25%  Similarity=0.417  Sum_probs=221.6

Q ss_pred             cccceEEEEeccCCCCCCCCCccCcccHHHHHhHHhHHHhHHhhcCCCCCCcccCCccchhHhhchHHHHHHhccHHHHH
Q psy12854          9 VITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEERVFA   88 (265)
Q Consensus         9 ~~~p~~~l~~nf~~p~~~~p~ll~~~~v~tLfHEfGHalH~lls~~~~~~~sg~~~~~~d~~E~pS~~~E~~~~~~~~L~   88 (265)
                      ++.|+++|+|||++|++++|+||+++||.|||||||||||+++++++|+.++|+ +++|||||+|||+||+|||+|++|.
T Consensus       437 ~~~Pv~~i~~Nf~~p~~~~p~LLt~~dV~TLfHE~GHalH~~ls~~~~~~~sgt-~~~~d~vE~pS~~~E~~~~~p~~L~  515 (680)
T 1y79_1          437 KTHPVIYNVCNYQKPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGT-NTPRDFVEFPSQINEHWATHPQVFA  515 (680)
T ss_dssp             TBCCEEEEEEEECCCCTTSCCBCCHHHHHHHHHHHHHHHHHHTCCCSSGGGSTT-CSCHHHHHHHHHHHHHGGGSHHHHH
T ss_pred             CcCCeEEEeccCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCcccccCc-cccchhhhccchhhhhHhcCHHHHH
Confidence            378999999999999999999999999999999999999999999999999998 5999999999999999999999999


Q ss_pred             HHHhhhcCCcccHHH-HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCC----CcHHHHHHHHccccCCC-CCCCCCCc
Q psy12854         89 ELNSHFATGEKLKMT-DEQLKALRAHNAGIDVCSELFKANLDLQLHNGPK----PHWSEISRELYPLHFGF-PIDKYSNL  162 (265)
Q Consensus        89 ~ls~h~~t~~~lp~~-~~~l~~~~~~~~~~~~~~ql~~a~~D~~lh~~~~----~~~~~l~~~l~~~~~~~-~~~~~~~~  162 (265)
                      .++.|++||+++|++ +++++++++++.++.+++|+.++.||+.+|....    ..+.+++++++++++.+ +..+.+++
T Consensus       516 ~~~~h~~t~e~~p~~l~~~l~~~~~~~~~~~~~rq~~~a~fD~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  595 (680)
T 1y79_1          516 RYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEENEAMQDVDDFELRALVAENMDLPAIPPRYR  595 (680)
T ss_dssp             HHCBCTTTCCBCCHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCCCCHHHHHHHHHHHTTCCBTTBCCSSC
T ss_pred             HHHhhccCCCcCCHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHHHHhCCCCCCCCCCCc
Confidence            999999999999999 9999999999999999999999999999998532    36889999999998654 54567788


Q ss_pred             CccccccCCCCccCCchhhHhHHHHHHHHHHHHHHcCCCCcccccCCCCCCCCCCCCCchHHHHHHHHHHhcCCCCccHH
Q psy12854        163 PCRFVEVGSGDLAAGYYSFLWSKLVSADIFYAFKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSS  242 (265)
Q Consensus       163 ~~~f~Hl~s~~Y~a~YYsYl~s~~~A~dv~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yR~~iL~~Ggs~~~~  242 (265)
                      |++|+|||++||+++||+|+||+++|+|+|++|++++.    +|               +++|++||++||+.|||++|.
T Consensus       596 ~~~f~Hif~ggY~a~yYsY~~a~vla~~~~~~f~e~g~----~~---------------~~~g~~y~~~iL~~GGs~~~~  656 (680)
T 1y79_1          596 SSYFAHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQGG----LT---------------RENGLRFREAILSRGNSEDLE  656 (680)
T ss_dssp             GGGCHHHHTSSCTTTTHHHHHHHHHHHHHHHHHHHTTS----SC---------------HHHHHHHHHHTTTTTTSSCHH
T ss_pred             cCcccceecCCcCCCcHhHHHHHHHHHHHHHHHHHcCC----CC---------------HHHHHHHHHHHhhCCCCccHH
Confidence            99999999989999999999999999999999998754    45               899999998899999999999


Q ss_pred             HHHHHhhCCCCCchHHHHhcCCC
Q psy12854        243 EVFRRFRGRDPCFKPFLDMFRLN  265 (265)
Q Consensus       243 e~l~~flGr~ps~~a~~~~~g~~  265 (265)
                      +++++||||+|+.++|+++.||.
T Consensus       657 el~~~f~G~dp~~~a~l~~~Gl~  679 (680)
T 1y79_1          657 RLYRQWRGKAPKIMPMLQHRGLN  679 (680)
T ss_dssp             HHHHHHHSSCCCSHHHHHHTTCC
T ss_pred             HHHHHhcCCCCChhHHHHHCCCC
Confidence            99999999999999999999974
>2o3e_A Neurolysin; thermolysin-like domain, substrate-binding channel, hydrolase; 2.20A {Rattus norvegicus} PDB: 1i1i_P Back     alignment and structure
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P Back     alignment and structure
>2qr4_A Peptidase M3B, oligoendopeptidase F; structural genomics, PSI-2, protein ST initiative; 2.50A {Enterococcus faecium} Back     alignment and structure
>3ce2_A Putative peptidase; structural genomics, unknown function, P protein structure initiative; 2.60A {Chlamydophila abortus} Back     alignment and structure
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase, hydrolase-hydrolase inhibitor complex; HET: 3A1; 1.80A {Geobacillus SP} PDB: 3ahm_A* 3aho_A* 2h1n_A 2h1j_A Back     alignment and structure
>3sks_A Putative oligoendopeptidase F; structural genomics, center for structural genomics of infec diseases, csgid, protease, hydrolase; 2.05A {Bacillus anthracis} Back     alignment and structure
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A* Back     alignment and structure
>1r42_A Angiotensin I converting enzyme 2; zinc metallopeptidase domain, Na open conformation, chloride ION binding site; HET: NAG; 2.20A {Homo sapiens} SCOP: d.92.1.5 PDB: 1r4l_A* 3sci_A 3scj_A 2ajf_A* 3kbh_A* 3d0g_A* 3d0h_A* 3d0i_A* 3sck_A 3scl_A Back     alignment and structure
>1ka2_A M32 carboxypeptidase; hexxh motif, M32 family, metallopeptidase; 2.20A {Pyrococcus furiosus} SCOP: d.92.1.5 PDB: 1k9x_A 1ka4_A Back     alignment and structure
>3nxq_A Angiotensin-converting enzyme; dicarboxy zinc metallopeptidase, hydrolase, hydrolase-hydrol inhibitor complex; HET: RX4 NAG FUC BMA P6G PG4; 1.99A {Homo sapiens} PDB: 2xyd_A* 2c6n_A* 2c6f_A* Back     alignment and structure
>2x96_A Angiotensin converting enzyme; hydrolase, ACE inhibitor, zinc metallopeptidase; HET: RX3 EPE NAG BMA MAN; 1.85A {Drosophila melanogaster} PDB: 2x8z_A* 2x90_A* 2x91_A* 2x8y_A* 2x97_A* 2xhm_A* 3zqz_A* 2x94_A* 2x92_A* 2x93_A* 2x95_A* 1j36_A* 1j37_A* 1j38_A Back     alignment and structure
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis} SCOP: d.92.1.0 Back     alignment and structure
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase; 2.10A {Thermus thermophilus HB27} SCOP: d.92.1.0 PDB: 1wgz_A Back     alignment and structure
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypept carboxypeptidase, hydrolase; 2.10A {Trypanosoma cruzi} Back     alignment and structure
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens} Back     alignment and structure
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A Back     alignment and structure
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A* Back     alignment and structure
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ... Back     alignment and structure
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 265
d1s4bp_654 d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thi 2e-44
d1i1ip_665 d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thi 3e-41
d2ajfa1597 d.92.1.5 (A:19-615) Angiotensin converting enzyme 2e-08
d1uzea_579 d.92.1.5 (A:) Angiotensin converting enzyme, ACE { 8e-05
d1j36a_598 d.92.1.5 (A:) Angiotensin converting enzyme, ACE { 1e-04
>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]} Length = 654 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Neurolysin-like
domain: Neurolysin (endopeptidase 24.16, thimet oligopeptidase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 2e-44
 Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 25/255 (9%)

Query: 8   TVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEW 67
           +    +  ++ N T+P    P LL   +VE  F  FG ++ +  +   ++  SG  +VE 
Sbjct: 417 SRQIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMHQLCSQAEFAMFSG-THVER 475

Query: 68  DSVYIINYFLTHFLYEERVFAELNSHFATGEKLKMTDEQLKALRAHN--AGIDVCSELFK 125
           D V   +  L ++++E+     ++ H+ TG  +   +   K + +     G+    ++  
Sbjct: 476 DFVEAPSQMLENWVWEQEPLLRMSRHYRTGSAVPR-ELLEKLIESRQANTGLFNLRQIVL 534

Query: 126 ANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPCRFVEVGSGDLAAGYYSFLWSK 185
           A +D  LH       +E    L     G P    +N+P  F  +  G   A YY +LWS+
Sbjct: 535 AKVDQALHTQTDADPAEEYARLCQEILGVPATPGTNMPATFGHLAGG-YDAQYYGYLWSE 593

Query: 186 LVSADIFYA-FKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSSEV 244
           + S D+F+  FK++G                        VG   R   L  GGS  +S +
Sbjct: 594 VYSMDMFHTRFKQEGV-------------------LNSKVGMDYRSCILRPGGSEDASAM 634

Query: 245 FRRFRGRDPCFKPFL 259
            RRF GRDP    FL
Sbjct: 635 LRRFLGRDPKQDAFL 649
>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 665 Back     information, alignment and structure
>d2ajfa1 d.92.1.5 (A:19-615) Angiotensin converting enzyme 2, ACE2 {Human (Homo sapiens) [TaxId: 9606]} Length = 597 Back     information, alignment and structure
>d1uzea_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Human (Homo sapiens) [TaxId: 9606]} Length = 579 Back     information, alignment and structure
>d1j36a_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 598 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query265
d1s4bp_654 Neurolysin (endopeptidase 24.16, thimet oligopepti 100.0
d1i1ip_665 Neurolysin (endopeptidase 24.16, thimet oligopepti 100.0
d2ajfa1597 Angiotensin converting enzyme 2, ACE2 {Human (Homo 99.97
d1uzea_579 Angiotensin converting enzyme, ACE {Human (Homo sa 99.97
d1j36a_598 Angiotensin converting enzyme, ACE {Fruit fly (Dro 99.95
d1k9xa_497 Thermostable carboxypeptidase 1 {Archaeon Pyrococc 98.97
d1j7na2223 Anthrax toxin lethal factor, N- and C-terminal dom 92.87
d1hfca_157 Fibroblast collagenase (MMP-1) {Human (Homo sapien 88.93
d1rm8a_169 Matrix metalloproteinase-16 (MMP-16) {Human (Homo 87.61
d1qiba_161 Gelatinase A {Human (Homo sapiens) [TaxId: 9606]} 87.31
d1y93a1158 Macrophage elastase (MMP-12) {Human (Homo sapiens) 87.28
d1hy7a_168 Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibro 87.26
d1mmqa_166 Matrilysin (MMP-7) {Human (Homo sapiens) [TaxId: 9 87.14
d1xuca1169 Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxI 86.91
d1i76a_163 Neutrophil collagenase (MMP-8) {Human (Homo sapien 86.47
d1hv5a_162 Stromelysin-3 (MMP-11) {Mouse (Mus musculus) [TaxI 86.11
d2ovxa1159 Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 86.07
d1k7ia2241 Metalloprotease {Erwinia chrysanthemi [TaxId: 556] 82.43
d1g9ka2242 Metalloprotease {Pseudomonas sp., tac ii 18 [TaxId 82.41
d1sata2243 Metalloprotease {Serratia marcescens [TaxId: 615]} 82.23
d1kapp2246 Metalloprotease {Pseudomonas aeruginosa [TaxId: 28 81.71
d1bqqm_174 Membrane-type matrix metalloproteinase (CDMT1-MMP) 81.49
>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Neurolysin-like
domain: Neurolysin (endopeptidase 24.16, thimet oligopeptidase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-69  Score=533.24  Aligned_cols=238  Identities=29%  Similarity=0.474  Sum_probs=227.8

Q ss_pred             CCccccceEEEEeccCCCCCCCCCccCcccHHHHHhHHhHHHhHHhhcCCCCCCcccCCccchhHhhchHHHHHHhccHH
Q psy12854          6 TKTVITPLNTLILNLTEPQYGKPCLLTFKQVENLFFHFGSLLQRSLTATHYSDVSGVNNVEWDSVYIINYFLTHFLYEER   85 (265)
Q Consensus         6 ~~~~~~p~~~l~~nf~~p~~~~p~ll~~~~v~tLfHEfGHalH~lls~~~~~~~sg~~~~~~d~~E~pS~~~E~~~~~~~   85 (265)
                      ++.+|+|+++++|||++|++++|+||+|++|+||||||||+||++|++++|++++||+ |||||||+||||||+|+|+|+
T Consensus       415 ~~~~q~Pv~~lvcNf~~p~~~~p~lLs~~ev~TlFHEfGHalH~ll~~~~y~~~sGt~-~~~DfvE~pSql~E~~~~~~~  493 (654)
T d1s4bp_         415 DGSRQIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMHQLCSQAEFAMFSGTH-VERDFVEAPSQMLENWVWEQE  493 (654)
T ss_dssp             TSCEECEEEEEECCCCCCBTTBCCBCCHHHHHHHHHHHHHHHHHHHCCCSSGGGSTTC-SCTTTTTHHHHHHHGGGGSHH
T ss_pred             cccccCCeEEEEeecCCCCCCCCceecHHHhhhHHHHHHHHHHHHhcccccccccccc-cHHHHHHHHHHHHHhccCChH
Confidence            4678999999999999999999999999999999999999999999999999999985 999999999999999999999


Q ss_pred             HHHHHHhhhcCCcccHHH-HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHccccCCCCCCCCCCcCc
Q psy12854         86 VFAELNSHFATGEKLKMT-DEQLKALRAHNAGIDVCSELFKANLDLQLHNGPKPHWSEISRELYPLHFGFPIDKYSNLPC  164 (265)
Q Consensus        86 ~L~~ls~h~~t~~~lp~~-~~~l~~~~~~~~~~~~~~ql~~a~~D~~lh~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  164 (265)
                      +|+.+++|++||++||++ +++++++++++.++.+++|+.+|.+||.+|+..+..+.++++++++++.++|..++++|++
T Consensus       494 vL~~~a~h~~tge~lp~~l~~~~~~~~~~~~~~~~~~ql~~a~~D~~lH~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  573 (654)
T d1s4bp_         494 PLLRMSRHYRTGSAVPRELLEKLIESRQANTGLFNLRQIVLAKVDQALHTQTDADPAEEYARLCQEILGVPATPGTNMPA  573 (654)
T ss_dssp             HHHHTCCCTTTCCCCCHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHTTSSCCCTTCCGGG
T ss_pred             HHhcccccCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHhcCCCCCCCCCCCC
Confidence            999999999999999999 9999999999999999999999999999999877779999999999999998888899999


Q ss_pred             cccccCCCCccCCchhhHhHHHHHHHHHHH-HHHcCCCCcccccCCCCCCCCCCCCCchHHHHHHHHHHhcCCCCccHHH
Q psy12854        165 RFVEVGSGDLAAGYYSFLWSKLVSADIFYA-FKEDGEGRLEDESGRSDSGVSGGERTEPNVGSRLRDTFLTFGGSCHSSE  243 (265)
Q Consensus       165 ~f~Hl~s~~Y~a~YYsYl~s~~~A~dv~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yR~~iL~~Ggs~~~~e  243 (265)
                      +|+||++ ||+|+||||+||+|+|+|+|+. |+++|.    +|               +++|++||++||++|||++|++
T Consensus       574 ~F~Hl~~-gY~a~YYsYlws~vlaad~~~~~F~~~g~----~~---------------~~~G~~~r~~iL~~Ggs~~~~e  633 (654)
T d1s4bp_         574 TFGHLAG-GYDAQYYGYLWSEVYSMDMFHTRFKQEGV----LN---------------SKVGMDYRSCILRPGGSEDASA  633 (654)
T ss_dssp             GCGGGGT-TCTTTTTHHHHHHHHHHHHHHHTHHHHCT----TC---------------HHHHHHHHHHTTTTGGGSCHHH
T ss_pred             cCccccC-CcccchHHHHHHHHHHHHHHHHHHHhcCC----CC---------------HHHHHHHHHHHhccCCCcCHHH
Confidence            9999974 6999999999999999999975 888765    56               9999999999999999999999


Q ss_pred             HHHHhhCCCCCchHHHHhcCC
Q psy12854        244 VFRRFRGRDPCFKPFLDMFRL  264 (265)
Q Consensus       244 ~l~~flGr~ps~~a~~~~~g~  264 (265)
                      ++++||||+|+++|||+++||
T Consensus       634 ~~~~f~Gr~p~~~a~l~~~gl  654 (654)
T d1s4bp_         634 MLRRFLGRDPKQDAFLLSKGL  654 (654)
T ss_dssp             HHHHHHSSCCCSHHHHHHTTC
T ss_pred             HHHHhcCCCCChhHHHHhCCC
Confidence            999999999999999999997
>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2ajfa1 d.92.1.5 (A:19-615) Angiotensin converting enzyme 2, ACE2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uzea_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j36a_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1k9xa_ d.92.1.5 (A:) Thermostable carboxypeptidase 1 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1j7na2 d.92.1.14 (A:551-773) Anthrax toxin lethal factor, N- and C-terminal domains {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1hfca_ d.92.1.11 (A:) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rm8a_ d.92.1.11 (A:) Matrix metalloproteinase-16 (MMP-16) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qiba_ d.92.1.11 (A:) Gelatinase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y93a1 d.92.1.11 (A:106-263) Macrophage elastase (MMP-12) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hy7a_ d.92.1.11 (A:) Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibroblast [TaxId: 9606]} Back     information, alignment and structure
>d1mmqa_ d.92.1.11 (A:) Matrilysin (MMP-7) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xuca1 d.92.1.11 (A:104-272) Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i76a_ d.92.1.11 (A:) Neutrophil collagenase (MMP-8) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hv5a_ d.92.1.11 (A:) Stromelysin-3 (MMP-11) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2ovxa1 d.92.1.11 (A:110-443) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k7ia2 d.92.1.6 (A:18-258) Metalloprotease {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1g9ka2 d.92.1.6 (A:3-244) Metalloprotease {Pseudomonas sp., tac ii 18 [TaxId: 306]} Back     information, alignment and structure
>d1sata2 d.92.1.6 (A:4-246) Metalloprotease {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kapp2 d.92.1.6 (P:1-246) Metalloprotease {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1bqqm_ d.92.1.11 (M:) Membrane-type matrix metalloproteinase (CDMT1-MMP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure