Psyllid ID: psy12894

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120----
Protein Sequence
MIISSSHFLSDSSDVIVDFNVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIHFSVSNT
Secondary Structure (PSIPRED)
cEEcccEEEEccccEEEcccccccccccccccccccccccccccccEEccccccccccccEEEEEEccEEEEEEEEEcccEEEEccccccccccccEEEEEccEEccccccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
cEEEEccccccccccccccccccccccccccccccccccccccccccEccEEccccccccEEEEEccccEEEEEEEccccEEEEcHHHcccccHHHcEEEEcccEcccccccccEEEEEEEEcc
Coil and Loop (DISEMBL)
miissshflsdssdvivdfnvddlttinssmnhcncacgqvernqrivggnvtklhefpwIAALTKKGKFYCGATLIAKRHVLTAAHciegvnpkeIKVTlgehdrlsknesvpVIIHFSVSNT
Flexible Loop (DISEMBL)
miissshflsdssdVIVDFNVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLgehdrlsknesvpviihfsvsnt
Low Complexity Region (SEG)
MIIssshflsdssDVIVDFNVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIHFSVSNT
Disordered region (IsUnstruct)
*************DVIVDFNVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD******SVPVIIHF*****
Disordered Region (DISOPRED)
*I***SHFLSDSSDVIVDFNV****************CGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESV*****F*****
Disordered Region (DISEMBL)
********LSDSSDVIVDFNVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIHFSVSNT
Disordered Region (DISPRO)
MIISSSHFLSDSSDVIVDFNVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIHFSVS**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIISSSHFLSDSSDVIVDFNVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIHFSVSNT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	124	2.2.26 [Sep-21-2011]
Q8MQS8	405	Venom serine protease 34	no	N/A	0.669	0.204	0.453	2e-13
Q3UP87	265	Neutrophil elastase OS=Mu	yes	N/A	0.516	0.241	0.461	1e-12
Q14C59	416	Transmembrane protease se	no	N/A	0.548	0.163	0.465	2e-11
Q9DBI0	811	Transmembrane protease se	no	N/A	0.685	0.104	0.406	4e-11
P79953	1004	Ovochymase-2 OS=Xenopus l	N/A	N/A	0.540	0.066	0.455	7e-11
P06868	812	Plasminogen OS=Bos taurus	no	N/A	0.766	0.116	0.372	1e-10
P98074	1034	Enteropeptidase OS=Sus sc	no	N/A	0.677	0.081	0.377	2e-10
Q66TN7	980	Ovochymase-2 OS=Rhinella	N/A	N/A	0.483	0.061	0.459	6e-10
P80009	333	Plasminogen (Fragment) OS	no	N/A	0.637	0.237	0.428	7e-10
Q8NF86	280	Serine protease 33 OS=Hom	yes	N/A	0.548	0.242	0.449	1e-09

>sp|Q8MQS8|SP34_APIME Venom serine protease 34 OS=Apis mellifera PE=2 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 35  NCACGQVERNQRIVGGNVTKLHEFPWIAAL--TKKGKFYCGATLIAKRHVLTAAHCIEGV 92
           NC CG  +   RIVGG  T ++EFP +A +  T +    CGAT+I+KR+VLTAAHCI   
Sbjct: 150 NCNCGW-KNPSRIVGGTNTGINEFPMMAGIKRTYEPGMICGATIISKRYVLTAAHCIIDE 208

Query: 93  NPKEIKVTLGEHDRLSKNESVPVIIH 118
           N  ++ + +GEHD  SK E+   ++H
Sbjct: 209 NTTKLAIVVGEHDWSSKTETNATVLH 234

Apis mellifera (taxid: 7460)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: -

>sp|Q3UP87|ELNE_MOUSE Neutrophil elastase OS=Mus musculus GN=Elane PE=2 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H +P++A+L ++G  +CGATLIA+  V++AAHC+ G+N + ++V LG HD 
Sbjct: 29  IVGGRPARPHAWPFMASLQRRGGHFCGATLIARNFVMSAAHCVNGLNFRSVQVVLGAHD- 87

Query: 107 LSKNE 111
           L + E
Sbjct: 88  LRRQE 92

Medullasin modifies the functions of natural killer cells, monocytes and granulocytes. Inhibits C5a-dependent neutrophil enzyme release and chemotaxis.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q14C59|TM11L_MOUSE Transmembrane protease serine 11B-like protein OS=Mus musculus GN=Tmprss11bnl PE=2 SV=2

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 5/73 (6%)

Query: 35  NCACGQVER----NQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIE 90
           N  CG+  R      RI GG+     E+PW A+L   GK YCGA+LI +R +LTAAHC +
Sbjct: 169 NNRCGRRPRMSATYDRITGGSTAHKGEWPWQASLRVNGKHYCGASLIGERFLLTAAHCFQ 228

Query: 91  GV-NPKEIKVTLG 102
           G  NPK + V+ G
Sbjct: 229 GTNNPKNLTVSFG 241

Probable serine protease.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|Q9DBI0|TMPS6_MOUSE Transmembrane protease serine 6 OS=Mus musculus GN=Tmprss6 PE=1 SV=4

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 6/91 (6%)

Query: 35  NCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--- 91
           +C CG    + RIVGG V+   E+PW A+L  +G+  CG  LIA R V+TAAHC +    
Sbjct: 565 HCDCGLQGLSSRIVGGTVSSEGEWPWQASLQIRGRHICGGALIADRWVITAAHCFQEDSM 624

Query: 92  VNPKEIKVTLGEHDRLSKNESVPVIIHFSVS 122
            +PK   V LG   ++ +N   P  + F VS
Sbjct: 625 ASPKLWTVFLG---KMRQNSRWPGEVSFKVS 652

Serine protease which hydrolyzes a range of proteins including type I collagen, fibronectin and fibrinogen. Can also activate urokinase-type plasminogen activator with low efficiency (By similarity). May play a specialized role in matrix remodeling processes in liver. Required to sense iron deficiency. Overexpression suppresses activation of the HAMP promoter.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|P79953|OVCH2_XENLA Ovochymase-2 OS=Xenopus laevis GN=ovch2 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 46  RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPK-EIKVTLGEH 104
           RIVGG  +K  + PW  +L + GK +CG TL++  HVLTAAHC+   N K  ++V +GE+
Sbjct: 45  RIVGGRESKKGQHPWTVSLKRNGKHFCGGTLVSHCHVLTAAHCLLDRNVKLYMRVYIGEY 104

Query: 105 DRLSKNES 112
           D++ K E+
Sbjct: 105 DQILKEET 112

Converts the glycoprotein envelope surrounding the egg from an unfertlizable to a fertlizable form during its transit through the pars recta portion of the oviduct by selectively hydrolyzing the envelope glycoprotein gp43. The egg envelope is converted to a sperm-penetrable form, via an increase in sperm binding.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

EC: 2

EC: 0

>sp|P06868|PLMN_BOVIN Plasminogen OS=Bos taurus GN=PLG PE=1 SV=2

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 7/102 (6%)

Query: 19  FNVDDLTTINSSMNHCNCACGQVERNQ---RIVGGNVTKLHEFPWIAALTKKGKFYCGAT 75
           F+  D+    SS +   C   +VE  +   RIVGG V+K H +PW  +L +  + +CG T
Sbjct: 556 FDYCDVPQCESSFD---CGKPKVEPKKCSGRIVGGCVSKPHSWPWQVSLRRSSRHFCGGT 612

Query: 76  LIAKRHVLTAAHCIEGVNPKEI-KVTLGEHDRLSKNESVPVI 116
           LI+ + VLTAAHC++ +      KV LG H+   + +SV  I
Sbjct: 613 LISPKWVLTAAHCLDNILALSFYKVILGAHNEKVREQSVQEI 654

Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated by CSPG4. Binds to cells.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

>sp|P98074|ENTK_PIG Enteropeptidase OS=Sus scrofa GN=TMPRSS15 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 6/90 (6%)

Query: 32  NHCNCACGQV--ERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCI 89
           NH +C   QV  E + +IVGGN ++   +PW+ AL   G+  CGA+L+++  +++AAHC+
Sbjct: 783 NHKSCGKKQVAQEVSPKIVGGNDSREGAWPWVVALYYNGQLLCGASLVSRDWLVSAAHCV 842

Query: 90  EGVN--PKEIKVTLGEHDRLSKNESVPVII 117
            G N  P + K  LG H  ++ N + P I+
Sbjct: 843 YGRNLEPSKWKAILGLH--MTSNLTSPQIV 870

Responsible for initiating activation of pancreatic proteolytic proenzymes (trypsin, chymotrypsin and carboxypeptidase A). It catalyzes the conversion of trypsinogen to trypsin which in turn activates other proenzymes including chymotrypsinogen, procarboxypeptidases, and proelastases.

Sus scrofa (taxid: 9823)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 9

>sp|Q66TN7|OVCH2_RHIAE Ovochymase-2 OS=Rhinella arenarum GN=OVCH2 PE=2 SV=2

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 46  RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPK-EIKVTLGEH 104
           RIVGG      E PW+ +L + GK +CG T+I+ +HVLTAAHC+   N +  ++V++G+H
Sbjct: 49  RIVGGTSAVKGESPWMVSLKRDGKHFCGGTIISDKHVLTAAHCVLDKNIEYHVRVSIGDH 108

Query: 105 D 105
           D
Sbjct: 109 D 109

Mediates gamete interaction by affecting the vitelline coat.

Bufo arenarum (taxid: 38577)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

EC: 2

EC: 0

>sp|P80009|PLMN_CANFA Plasminogen (Fragment) OS=Canis familiaris GN=PLG PE=1 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 5/84 (5%)

Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPW-IAALTKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +   R+VGG V   H +PW I+  T+ GK +CG TLI+   VLTAAHC+E
Sbjct: 89  DCGKPQVEPKKCPGRVVGGCVANPHSWPWQISLRTRYGKHFCGGTLISPEWVLTAAHCLE 148

Query: 91  -GVNPKEIKVTLGEHDRLSKNESV 113
               P   KV LG H  ++    V
Sbjct: 149 RSSRPASYKVILGAHKEVNLESDV 172

Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated by CSPG4. Binds to cells.

Canis familiaris (taxid: 9615)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

>sp|Q8NF86|PRS33_HUMAN Serine protease 33 OS=Homo sapiens GN=PRSS33 PE=1 SV=3

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 35  NCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCI-EGVN 93
           + ACGQ   + RIVGG   +  E+PW A++  +G   CG +LIA + VLTAAHC      
Sbjct: 25  SAACGQPRMSSRIVGGRDGRDGEWPWQASIQHRGAHVCGGSLIAPQWVLTAAHCFPRRAL 84

Query: 94  PKEIKVTLG 102
           P E +V LG
Sbjct: 85  PAEYRVRLG 93

Serine protease that has amidolytic activity, cleaving its substrates before Arg residues.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
242019714	315	trypsin, putative [Pediculus humanus cor	0.782	0.307	0.557	6e-26
189234557	286	PREDICTED: similar to oviductin [Triboli	0.685	0.297	0.541	9e-22
357619638	642	serine protease-like protein [Danaus ple	0.677	0.130	0.558	6e-20
347972160	327	AGAP004566-PA [Anopheles gambiae str. PE	0.653	0.247	0.518	6e-19
195129139	377	GI13812 [Drosophila mojavensis] gi|19392	0.75	0.246	0.473	1e-18
307208933	223	Serine protease 27 [Harpegnathos saltato	0.588	0.327	0.540	1e-18
328777198	302	PREDICTED: trypsin-7-like [Apis mellifer	0.612	0.251	0.552	3e-18
350401720	302	PREDICTED: trypsin-7-like [Bombus impati	0.612	0.251	0.552	3e-18
340718310	302	PREDICTED: trypsin-7-like [Bombus terres	0.612	0.251	0.552	3e-18
380027809	302	PREDICTED: trypsin-7-like [Apis florea]	0.612	0.251	0.552	3e-18

>gi|242019714|ref|XP_002430304.1| trypsin, putative [Pediculus humanus corporis] gi|212515419|gb|EEB17566.1| trypsin, putative [Pediculus humanus corporis]

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 73/104 (70%), Gaps = 7/104 (6%)

Query: 17  VDF--NVDDLTTIN---SSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFY 71
           +DF  N    + IN     + HC C CG   R  RIVGGNVTK+ E+PWIAA+ +KGKFY
Sbjct: 38  IDFVNNTTSTSIINKPVGDLPHCGCYCGTGGRKHRIVGGNVTKISEYPWIAAMFRKGKFY 97

Query: 72  CGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR--LSKNESV 113
           CG  LI +RHVLTAAHCI G NP+++KV LGEHDR  L++ ++V
Sbjct: 98  CGGALITRRHVLTAAHCIYGFNPQDLKVVLGEHDRDVLTETDTV 141

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234557|ref|XP_974113.2| PREDICTED: similar to oviductin [Tribolium castaneum] gi|270002766|gb|EEZ99213.1| serine protease P11 [Tribolium castaneum]

 Score =  107 bits (267), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 60/85 (70%)

Query: 34  CNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
           C+C CG   R  R+VGGN+TK+HEFPWIA L K G+F+CGATLI +RH+LTAAHC+ G  
Sbjct: 23  CDCVCGVSNRQMRVVGGNITKVHEFPWIAGLGKGGEFHCGATLITRRHLLTAAHCVNGFA 82

Query: 94  PKEIKVTLGEHDRLSKNESVPVIIH 118
             E  V L +HDR S++    +I+ 
Sbjct: 83  VNEFTVVLADHDRDSQDRFSTIIVR 107

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357619638|gb|EHJ72128.1| serine protease-like protein [Danaus plexippus]

 Score =  101 bits (252), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 2/86 (2%)

Query: 30  SMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCI 89
           S N CNC CG+     RIVGG  T ++EFPW+A LT   KFYCG  LI  R++LTAAHC+
Sbjct: 386 SQNRCNCRCGERNEESRIVGGVETSVNEFPWVARLTYFNKFYCGGMLINDRYILTAAHCV 445

Query: 90  EGVNPKEIKVTLGEHDRLSKNESVPV 115
           +G+    IKVTLGEH+R   N+S PV
Sbjct: 446 KGLMWFMIKVTLGEHNRC--NDSRPV 469

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347972160|ref|XP_313869.5| AGAP004566-PA [Anopheles gambiae str. PEST] gi|333469199|gb|EAA09293.5| AGAP004566-PA [Anopheles gambiae str. PEST]

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 58/81 (71%)

Query: 36  CACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPK 95
           C CG+  R  RIVGG  T+++++PW+A L   G FYCG +LI+ RHVLTAAHC+ G N  
Sbjct: 72  CKCGRTNRLTRIVGGQETQVNQYPWMAMLQYSGTFYCGGSLISDRHVLTAAHCVHGFNRN 131

Query: 96  EIKVTLGEHDRLSKNESVPVI 116
           +I V L EHDR+S +ES+ ++
Sbjct: 132 KISVVLMEHDRVSTSESMTMV 152

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195129139|ref|XP_002009016.1| GI13812 [Drosophila mojavensis] gi|193920625|gb|EDW19492.1| GI13812 [Drosophila mojavensis]

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/93 (47%), Positives = 58/93 (62%)

Query: 19  FNVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIA 78
           FN ++    +S    C+C CG+     RIVGG  T + E+PW+A L+   +FYCG TLI 
Sbjct: 103 FNRNNSPAAHSQTATCSCRCGERNDESRIVGGTTTGVSEYPWMARLSYFNRFYCGGTLIN 162

Query: 79  KRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE 111
            R+VLTAAHC++G     IKVT GEHDR +  E
Sbjct: 163 DRYVLTAAHCVKGFMWFMIKVTFGEHDRCNDKE 195

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307208933|gb|EFN86144.1| Serine protease 27 [Harpegnathos saltator]

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 1/74 (1%)

Query: 35  NCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNP 94
           +C CG V R  RIVGGNVT ++E+PW+ ++TKKG FYC  ++I+++HVLTAAHC+EG + 
Sbjct: 83  DCVCG-VGRKTRIVGGNVTSVYEYPWLVSMTKKGMFYCAGSIISRKHVLTAAHCLEGFDI 141

Query: 95  KEIKVTLGEHDRLS 108
           K IK+ L +++R S
Sbjct: 142 KTIKLVLADNERPS 155

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777198|ref|XP_003249299.1| PREDICTED: trypsin-7-like [Apis mellifera]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 53/76 (69%)

Query: 34  CNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
           C C+CG      RIVGG  T+++EFPW+A L+   KFYCG TLI  R+VLTAAHC++G  
Sbjct: 50  CYCSCGLRNEESRIVGGQTTRMNEFPWMARLSYLNKFYCGGTLINDRYVLTAAHCVKGFM 109

Query: 94  PKEIKVTLGEHDRLSK 109
              IKVT GEHDR ++
Sbjct: 110 WFMIKVTFGEHDRCTE 125

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401720|ref|XP_003486239.1| PREDICTED: trypsin-7-like [Bombus impatiens]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 53/76 (69%)

Query: 34  CNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
           C C+CG      RIVGG  T+++EFPW+A L+   KFYCG TLI  R+VLTAAHC++G  
Sbjct: 50  CYCSCGLRNEESRIVGGQTTRMNEFPWMARLSYLNKFYCGGTLINDRYVLTAAHCVKGFM 109

Query: 94  PKEIKVTLGEHDRLSK 109
              IKVT GEHDR ++
Sbjct: 110 WFMIKVTFGEHDRCTE 125

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340718310|ref|XP_003397612.1| PREDICTED: trypsin-7-like [Bombus terrestris]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 53/76 (69%)

Query: 34  CNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
           C C+CG      RIVGG  T+++EFPW+A L+   KFYCG TLI  R+VLTAAHC++G  
Sbjct: 50  CYCSCGLRNEESRIVGGQTTRMNEFPWMARLSYLNKFYCGGTLINDRYVLTAAHCVKGFM 109

Query: 94  PKEIKVTLGEHDRLSK 109
              IKVT GEHDR ++
Sbjct: 110 WFMIKVTFGEHDRCTE 125

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027809|ref|XP_003697609.1| PREDICTED: trypsin-7-like [Apis florea]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 53/76 (69%)

Query: 34  CNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
           C C+CG      RIVGG  T+++EFPW+A L+   KFYCG TLI  R+VLTAAHC++G  
Sbjct: 50  CYCSCGLRNEESRIVGGQTTRMNEFPWMARLSYLNKFYCGGTLINDRYVLTAAHCVKGFM 109

Query: 94  PKEIKVTLGEHDRLSK 109
              IKVT GEHDR ++
Sbjct: 110 WFMIKVTFGEHDRCTE 125

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
FB|FBgn0036436	374	CG4914 [Drosophila melanogaste	0.677	0.224	0.5	2.2e-18
FB|FBgn0039272	325	CG11836 [Drosophila melanogast	0.701	0.267	0.425	9.5e-18
FB|FBgn0034661	372	CG4386 [Drosophila melanogaste	0.653	0.217	0.444	3.9e-16
FB|FBgn0034666	352	CG9294 [Drosophila melanogaste	0.645	0.227	0.412	4.2e-15
FB|FBgn0042098	364	CG18735 [Drosophila melanogast	0.572	0.195	0.478	4.8e-15
UNIPROTKB|A6QPP7	267	ELA2 "ELA2 protein" [Bos tauru	0.516	0.239	0.476	1e-12
UNIPROTKB|G3MWP1	286	ELANE "Uncharacterized protein	0.516	0.223	0.476	1.5e-12
MGI|MGI:2679229	265	Elane "elastase, neutrophil ex	0.516	0.241	0.461	1.7e-12
UNIPROTKB|I3LK80	267	ELANE "Uncharacterized protein	0.524	0.243	0.454	2.3e-12
FB|FBgn0036427	411	CG4613 [Drosophila melanogaste	0.758	0.228	0.395	3e-12

FB|FBgn0036436 CG4914 [Drosophila melanogaster (taxid:7227)]

 Score = 225 (84.3 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 42/84 (50%), Positives = 54/84 (64%)

Query:    28 NSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAH 87
             N +   C+C CG+     RIVGG  T + E+PW+A L+   +FYCG TLI  R+VLTAAH
Sbjct:   109 NQTSPTCSCRCGERNDESRIVGGTTTGVSEYPWMARLSYFNRFYCGGTLINDRYVLTAAH 168

Query:    88 CIEGVNPKEIKVTLGEHDRLSKNE 111
             C++G     IKVT GEHDR +  E
Sbjct:   169 CVKGFMWFMIKVTFGEHDRCNDKE 192

GO:0004252 "serine-type endopeptidase activity" evidence=ISS;NAS

GO:0006508 "proteolysis" evidence=IEA;NAS

FB|FBgn0039272 CG11836 [Drosophila melanogaster (taxid:7227)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 37/87 (42%), Positives = 59/87 (67%)

Query:    26 TINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTA 85
             T NSS+ +C+C CG      RIVGG  T ++++PW+A +   GKF+CG +L+ K +VL+A
Sbjct:    68 TENSSLKNCDCDCGFSNEEIRIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSA 127

Query:    86 AHCIEGVNPKEIKVTLGEHDRLSKNES 112
             AHC++ +   +I+V  G+HD+   +ES
Sbjct:   128 AHCVKKLRKSKIRVIFGDHDQEITSES 154

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

FB|FBgn0034661 CG4386 [Drosophila melanogaster (taxid:7227)]

 Score = 205 (77.2 bits), Expect = 3.9e-16, P = 3.9e-16
 Identities = 36/81 (44%), Positives = 52/81 (64%)

Query:    26 TINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTA 85
             T+N   N  +C CG     +RIVGG  T++H++PW+A L   G+FYC A+L+  + +LTA
Sbjct:   106 TLNPPRNCSDCVCGIANIQKRIVGGQETEVHQYPWVAMLLYGGRFYCAASLLNDQFLLTA 165

Query:    86 AHCIEGVNPKEIKVTLGEHDR 106
             +HC+ G   + I V L EHDR
Sbjct:   166 SHCVYGFRKERISVRLLEHDR 186

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

FB|FBgn0034666 CG9294 [Drosophila melanogaster (taxid:7227)]

 Score = 195 (73.7 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 33/80 (41%), Positives = 51/80 (63%)

Query:    36 CACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPK 95
             C CG +    +IVGG  T++H++PW+A +    +FYC  +LI   +VLTAAHC+EGV P+
Sbjct:    90 CRCGLINTLYKIVGGQETRVHQYPWMAVILIYNRFYCSGSLINDLYVLTAAHCVEGVPPE 149

Query:    96 EIKVTLGEHDRLSKNESVPV 115
              I +   EH+R   N+ + +
Sbjct:   150 LITLRFLEHNRSHSNDDIVI 169

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

FB|FBgn0042098 CG18735 [Drosophila melanogaster (taxid:7227)]

 Score = 195 (73.7 bits), Expect = 4.8e-15, P = 4.8e-15
 Identities = 34/71 (47%), Positives = 47/71 (66%)

Query:    36 CACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPK 95
             C+CG +    RIVGG  T++HE+PW+  L   G FYCGA+L+  ++ LTAAHC+ G   +
Sbjct:    72 CSCGNINTRHRIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCVNGFYHR 131

Query:    96 EIKVTLGEHDR 106
              I V L EH+R
Sbjct:   132 LITVRLLEHNR 142

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

GO:0006508 "proteolysis" evidence=IEA;NAS

UNIPROTKB|A6QPP7 ELA2 "ELA2 protein" [Bos taurus (taxid:9913)]

 Score = 169 (64.5 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 31/65 (47%), Positives = 47/65 (72%)

Query:    47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
             IVGG   + H +P+IA+L ++G  +CGATLIA+  VL+AAHC+ G+N + ++V LG H+ 
Sbjct:    30 IVGGRAARPHAWPFIASLQRRGGHFCGATLIARNFVLSAAHCLNGLNFRSVRVVLGAHN- 88

Query:   107 LSKNE 111
             L + E
Sbjct:    89 LRRQE 93

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|G3MWP1 ELANE "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 169 (64.5 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 31/65 (47%), Positives = 47/65 (72%)

Query:    47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
             IVGG   + H +P+IA+L ++G  +CGATLIA+  VL+AAHC+ G+N + ++V LG H+ 
Sbjct:    30 IVGGRAARPHAWPFIASLQRRGGHFCGATLIARNFVLSAAHCLNGLNFRSVRVVLGAHN- 88

Query:   107 LSKNE 111
             L + E
Sbjct:    89 LRRQE 93

GO:0070947 "neutrophil mediated killing of fungus" evidence=IEA

GO:0050900 "leukocyte migration" evidence=IEA

GO:0050778 "positive regulation of immune response" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0045416 "positive regulation of interleukin-8 biosynthetic process" evidence=IEA

GO:0045415 "negative regulation of interleukin-8 biosynthetic process" evidence=IEA

GO:0045079 "negative regulation of chemokine biosynthetic process" evidence=IEA

GO:0044130 "negative regulation of growth of symbiont in host" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0030141 "secretory granule" evidence=IEA

GO:0019955 "cytokine binding" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0009411 "response to UV" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0002438 "acute inflammatory response to antigenic stimulus" evidence=IEA

GO:0002020 "protease binding" evidence=IEA

GO:0001878 "response to yeast" evidence=IEA

MGI|MGI:2679229 Elane "elastase, neutrophil expressed" [Mus musculus (taxid:10090)]

 Score = 167 (63.8 bits), Expect = 1.7e-12, P = 1.7e-12
 Identities = 30/65 (46%), Positives = 47/65 (72%)

Query:    47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
             IVGG   + H +P++A+L ++G  +CGATLIA+  V++AAHC+ G+N + ++V LG HD 
Sbjct:    29 IVGGRPARPHAWPFMASLQRRGGHFCGATLIARNFVMSAAHCVNGLNFRSVQVVLGAHD- 87

Query:   107 LSKNE 111
             L + E
Sbjct:    88 LRRQE 92

GO:0001878 "response to yeast" evidence=IMP

GO:0002020 "protease binding" evidence=ISO

GO:0002438 "acute inflammatory response to antigenic stimulus" evidence=IDA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004175 "endopeptidase activity" evidence=ISO

GO:0004252 "serine-type endopeptidase activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006508 "proteolysis" evidence=ISO

GO:0006909 "phagocytosis" evidence=IMP

GO:0008152 "metabolic process" evidence=IDA

GO:0008201 "heparin binding" evidence=ISO

GO:0008233 "peptidase activity" evidence=ISO

GO:0008236 "serine-type peptidase activity" evidence=IEA

GO:0009411 "response to UV" evidence=ISO

GO:0009986 "cell surface" evidence=ISO

GO:0016787 "hydrolase activity" evidence=IEA

GO:0019955 "cytokine binding" evidence=ISO

GO:0030141 "secretory granule" evidence=ISO

GO:0032496 "response to lipopolysaccharide" evidence=IGI;IMP

GO:0044130 "negative regulation of growth of symbiont in host" evidence=IGI;IMP

GO:0045079 "negative regulation of chemokine biosynthetic process" evidence=ISO

GO:0045415 "negative regulation of interleukin-8 biosynthetic process" evidence=ISO

GO:0045416 "positive regulation of interleukin-8 biosynthetic process" evidence=ISO

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=ISO

GO:0050778 "positive regulation of immune response" evidence=IGI;IMP

GO:0050832 "defense response to fungus" evidence=IGI;IMP

GO:0050900 "leukocyte migration" evidence=IMP

GO:0070947 "neutrophil mediated killing of fungus" evidence=IMP

UNIPROTKB|I3LK80 ELANE "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 166 (63.5 bits), Expect = 2.3e-12, P = 2.3e-12
 Identities = 30/66 (45%), Positives = 47/66 (71%)

Query:    47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
             IVGG   + H +P++A+L ++G  +CG TLIA+  VL+AAHC+ G+N + ++V LG H+ 
Sbjct:    30 IVGGRPARPHAWPFMASLQRRGSHFCGGTLIARNFVLSAAHCLNGLNFRSVRVVLGAHN- 88

Query:   107 LSKNES 112
             L + ES
Sbjct:    89 LRRGES 94

GO:0070947 "neutrophil mediated killing of fungus" evidence=IEA

GO:0050900 "leukocyte migration" evidence=IEA

GO:0050778 "positive regulation of immune response" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0045416 "positive regulation of interleukin-8 biosynthetic process" evidence=IEA

GO:0045415 "negative regulation of interleukin-8 biosynthetic process" evidence=IEA

GO:0045079 "negative regulation of chemokine biosynthetic process" evidence=IEA

GO:0044130 "negative regulation of growth of symbiont in host" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0030141 "secretory granule" evidence=IEA

GO:0019955 "cytokine binding" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0009411 "response to UV" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0002438 "acute inflammatory response to antigenic stimulus" evidence=IEA

GO:0002020 "protease binding" evidence=IEA

GO:0001878 "response to yeast" evidence=IEA

FB|FBgn0036427 CG4613 [Drosophila melanogaster (taxid:7227)]

 Score = 171 (65.3 bits), Expect = 3.0e-12, P = 3.0e-12
 Identities = 38/96 (39%), Positives = 56/96 (58%)

Query:    25 TTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLT 84
             TT N + N    ACG V    RIVGG   + +++PWIA + +    +CG TLI  R+VLT
Sbjct:   154 TTSNPNFNPLT-ACG-VPNVNRIVGGTQVRTNKYPWIAQIIRGTFLFCGGTLINDRYVLT 211

Query:    85 AAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIHFS 120
             AAHC+ G++ + + V L + DR S +  V   + F+
Sbjct:   212 AAHCVHGMDMRGVSVRLLQLDRSSTHLGVTRSVAFA 247

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

GO:0006508 "proteolysis" evidence=IEA;NAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	124
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	7e-26
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	4e-24
pfam00089	218	pfam00089, Trypsin, Trypsin	9e-15
COG5640	413	COG5640, COG5640, Secreted trypsin-like serine pro	9e-09
COG3591	251	COG3591, COG3591, V8-like Glu-specific endopeptida	0.002

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score = 96.2 bits (240), Expect = 7e-26
 Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 6/79 (7%)

Query: 46  RIVGGNVTKLHEFPWIAALT-KKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           RIVGG+   +  FPW  +L    G+ +CG +LI+ R VLTAAHC+ G +P  I+V LG H
Sbjct: 1   RIVGGSEANIGSFPWQVSLQYGGGRHFCGGSLISPRWVLTAAHCVRGSDPSNIRVRLGSH 60

Query: 105 DRLSKNESV-----PVIIH 118
           D  S  E        VIIH
Sbjct: 61  DLSSGEEGQVIKVSKVIIH 79

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score = 92.0 bits (229), Expect = 4e-24
 Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 47  IVGGNVTKLHEFPWIAALT-KKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG+  K+  FPW  +L    G+ +CG +LI+ R VLTAAHC+    P    V LG HD
Sbjct: 1   IVGGSEAKIGSFPWQVSLQYTGGRHFCGGSLISPRWVLTAAHCVYSSAPSNYTVRLGSHD 60

Query: 106 RLSKNESV------PVIIH 118
             S            VI+H
Sbjct: 61  LSSNEGGGQVIKVKKVIVH 79

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score = 67.1 bits (164), Expect = 9e-15
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY-CGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG+  +   FPW  +L      + CG +LI++  VLTAAHC+   N K ++V LG H+
Sbjct: 1   IVGGDEAQPGSFPWQVSLQVSSGKHFCGGSLISENWVLTAAHCVS--NAKSVRVVLGAHN 58

Query: 106 RLSKNESVPVI 116
            + +       
Sbjct: 59  IVLREGGEQKF 69

Length = 218

>gnl|CDD|227927 COG5640, COG5640, Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

 Score = 51.4 bits (123), Expect = 9e-09
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)

Query: 46  RIVGGNVTKLHEFPWIAALTKKGKF-----YCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
           RI+GG+     E+P + AL  +        +CG + +  R+VLTAAHC +  +P    V 
Sbjct: 32  RIIGGSNANAGEYPSLVALVDRISDYVSGTFCGGSKLGGRYVLTAAHCADASSPISSDVN 91

Query: 101 LG 102
             
Sbjct: 92  RV 93

Length = 413

>gnl|CDD|226119 COG3591, COG3591, V8-like Glu-specific endopeptidase [Amino acid transport and metabolism]

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 52 VTKLHEFPW--IAAL-TKKGKFYCGATLIAKRHVLTAAHCI 89
          VT   +FP+  +       G+    ATLI    VLTA HCI
Sbjct: 43 VTDTTQFPYSAVVQFEAATGRLCTAATLIGPNTVLTAGHCI 83

Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	124
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	99.75
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	99.72
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	99.66
KOG3627|consensus	256		99.58
COG5640	413	Secreted trypsin-like serine protease [Posttransla	99.24
PF09342	267	DUF1986: Domain of unknown function (DUF1986); Int	98.55
PF03761	282	DUF316: Domain of unknown function (DUF316) ; Inte	98.4
COG3591	251	V8-like Glu-specific endopeptidase [Amino acid tra	96.21
PF13365	120	Trypsin_2: Trypsin-like peptidase domain; PDB: 1Y8	95.71

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=99.75  E-value=7.6e-18  Score=116.45  Aligned_cols=77  Identities=42%  Similarity=0.761  Sum_probs=65.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCC---C---CeecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSK---N---ESVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~---~---~~~~vi~Hp  119 (124)
                      |+||..+..++|||+|.+... ..+.|+|+||+++||||||||+.......+.|++|..+....   .   ...++++||
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~~~~~~~C~GtlIs~~~VLTaAhC~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp   80 (232)
T cd00190           1 IVGGSEAKIGSFPWQVSLQYTGGRHFCGGSLISPRWVLTAAHCVYSSAPSNYTVRLGSHDLSSNEGGGQVIKVKKVIVHP   80 (232)
T ss_pred             CcCCeECCCCCCCCEEEEEccCCcEEEEEEEeeCCEEEECHHhcCCCCCccEEEEeCcccccCCCCceEEEEEEEEEECC
Confidence            579999999999999999876 678999999999999999999986556789999998876542   1   134599999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        81 ~y~~   84 (232)
T cd00190          81 NYNP   84 (232)
T ss_pred             CCCC
Confidence            9974

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=99.72  E-value=2.2e-17  Score=114.42  Aligned_cols=78  Identities=45%  Similarity=0.841  Sum_probs=66.1

Q ss_pred             ceeCCEEcCCCCCceEEEEEeCC-ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC-----CeecEEECC
Q psy12894         46 RIVGGNVTKLHEFPWIAALTKKG-KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN-----ESVPVIIHF  119 (124)
Q Consensus        46 ri~gg~~~~~~~~Pw~v~l~~~~-~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~-----~~~~vi~Hp  119 (124)
                      |++||..+.+++|||++.+.... .+.|+|+||++++|||||||+.......+.|++|.++.....     ...++++||
T Consensus         1 ~~~~G~~~~~~~~Pw~~~i~~~~~~~~C~GtlIs~~~VLTaahC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~~~~~p   80 (229)
T smart00020        1 RIVGGSEANIGSFPWQVSLQYRGGRHFCGGSLISPRWVLTAAHCVYGSDPSNIRVRLGSHDLSSGEEGQVIKVSKVIIHP   80 (229)
T ss_pred             CccCCCcCCCCCCCcEEEEEEcCCCcEEEEEEecCCEEEECHHHcCCCCCcceEEEeCcccCCCCCCceEEeeEEEEECC
Confidence            58899999999999999998876 789999999999999999999865456899999988765443     244599999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        81 ~~~~   84 (229)
T smart00020       81 NYNP   84 (229)
T ss_pred             CCCC
Confidence            9973

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.66  E-value=3.5e-16  Score=107.44  Aligned_cols=75  Identities=40%  Similarity=0.757  Sum_probs=62.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC-ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG-KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~-~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp  119 (124)
                      |.||..+.+++|||++.+.... .++|+|+||+++||||||||+..  ...+.+++|.........      ..+++.||
T Consensus         1 i~~g~~~~~~~~p~~v~i~~~~~~~~C~G~li~~~~vLTaahC~~~--~~~~~v~~g~~~~~~~~~~~~~~~v~~~~~h~   78 (220)
T PF00089_consen    1 IVGGDPASPGEFPWVVSIRYSNGRFFCTGTLISPRWVLTAAHCVDG--ASDIKVRLGTYSIRNSDGSEQTIKVSKIIIHP   78 (220)
T ss_dssp             SBSSEECGTTSSTTEEEEEETTTEEEEEEEEEETTEEEEEGGGHTS--GGSEEEEESESBTTSTTTTSEEEEEEEEEEET
T ss_pred             CCCCEECCCCCCCeEEEEeeCCCCeeEeEEeccccccccccccccc--cccccccccccccccccccccccccccccccc
Confidence            6899999999999999999977 89999999999999999999985  467889999843332222      33489999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        79 ~~~~   82 (220)
T PF00089_consen   79 KYDP   82 (220)
T ss_dssp             TSBT
T ss_pred             cccc
Confidence            9985

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>KOG3627|consensus

Probab=99.58  E-value=1.3e-14  Score=102.84  Aligned_cols=79  Identities=39%  Similarity=0.697  Sum_probs=64.0

Q ss_pred             CCceeCCEEcCCCCCceEEEEEeCC--ceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCC---------CC
Q psy12894         44 NQRIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSK---------NE  111 (124)
Q Consensus        44 ~~ri~gg~~~~~~~~Pw~v~l~~~~--~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~---------~~  111 (124)
                      ..||+||..+.++++||++++....  .+.|||+||+++||||||||+... .. .+.|++|.++....         ..
T Consensus        10 ~~~i~~g~~~~~~~~Pw~~~l~~~~~~~~~Cggsli~~~~vltaaHC~~~~~~~-~~~V~~G~~~~~~~~~~~~~~~~~~   88 (256)
T KOG3627|consen   10 EGRIVGGTEAEPGSFPWQVSLQYGGNGRHLCGGSLISPRWVLTAAHCVKGASAS-LYTVRLGEHDINLSVSEGEEQLVGD   88 (256)
T ss_pred             cCCEeCCccCCCCCCCCEEEEEECCCcceeeeeEEeeCCEEEEChhhCCCCCCc-ceEEEECccccccccccCchhhhce
Confidence            5799999999999999999998875  689999999999999999999753 22 78999997643322         11


Q ss_pred             eecEEECCCCCC
Q psy12894        112 SVPVIIHFSVSN  123 (124)
Q Consensus       112 ~~~vi~Hp~y~~  123 (124)
                      ..++++||+|+.
T Consensus        89 v~~~i~H~~y~~  100 (256)
T KOG3627|consen   89 VEKIIVHPNYNP  100 (256)
T ss_pred             eeEEEECCCCCC
Confidence            334889999985

>COG5640 Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

Probab=99.24  E-value=4e-12  Score=93.02  Aligned_cols=79  Identities=28%  Similarity=0.495  Sum_probs=60.9

Q ss_pred             CCceeCCEEcCCCCCceEEEEEeC-----CceeEEEEEecCCEEEecccccCCCC---CceEEEEEceeecCCC--CCee
Q psy12894         44 NQRIVGGNVTKLHEFPWIAALTKK-----GKFYCGATLIAKRHVLTAAHCIEGVN---PKEIKVTLGEHDRLSK--NESV  113 (124)
Q Consensus        44 ~~ri~gg~~~~~~~~Pw~v~l~~~-----~~~~CgGsLi~~~~vlTaahC~~~~~---~~~~~V~~G~~~~~~~--~~~~  113 (124)
                      ..||+||..+..++||++|++..+     ...+|||+++..|||||||||+....   ....+|..+..+....  ...+
T Consensus        30 s~rIigGs~Anag~~P~~VaLv~~isd~~s~tfCGgs~l~~RYvLTAAHC~~~~s~is~d~~~vv~~l~d~Sq~~rg~vr  109 (413)
T COG5640          30 SSRIIGGSNANAGEYPSLVALVDRISDYVSGTFCGGSKLGGRYVLTAAHCADASSPISSDVNRVVVDLNDSSQAERGHVR  109 (413)
T ss_pred             ceeEecCcccccccCchHHHHHhhcccccceeEeccceecceEEeeehhhccCCCCccccceEEEecccccccccCcceE
Confidence            679999999999999999998653     34689999999999999999997643   2345555555444332  2456


Q ss_pred             cEEECCCCC
Q psy12894        114 PVIIHFSVS  122 (124)
Q Consensus       114 ~vi~Hp~y~  122 (124)
                      +++.|..|.
T Consensus       110 ~i~~~efY~  118 (413)
T COG5640         110 TIYVHEFYS  118 (413)
T ss_pred             EEeeecccc
Confidence            699999886

>PF09342 DUF1986: Domain of unknown function (DUF1986); InterPro: IPR015420 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.55  E-value=3.3e-07  Score=64.49  Aligned_cols=50  Identities=22%  Similarity=0.704  Sum_probs=43.5

Q ss_pred             CCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC--CCceEEEEEceee
Q psy12894         56 HEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV--NPKEIKVTLGEHD  105 (124)
Q Consensus        56 ~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~--~~~~~~V~~G~~~  105 (124)
                      ..|||.+.++..+.+.|.|.||.+.|+|++..|+.+.  ......|.+|...
T Consensus        14 y~WPWlA~IYvdG~~~CsgvLlD~~WlLvsssCl~~I~L~~~YvsallG~~K   65 (267)
T PF09342_consen   14 YHWPWLADIYVDGRYWCSGVLLDPHWLLVSSSCLRGISLSHHYVSALLGGGK   65 (267)
T ss_pred             ccCcceeeEEEcCeEEEEEEEeccceEEEeccccCCcccccceEEEEecCcc
Confidence            3599999999999999999999999999999999863  3467789999754

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found in serine endopeptidases belonging to MEROPS peptidase family S1A (clan PA). It is found in unusual mosaic proteins, which are encoded by the Drosophila nudel gene (see P98159 from SWISSPROT). Nudel is involved in defining embryonic dorsoventral polarity. Three proteases; ndl, gd and snk process easter to create active easter. Active easter defines cell identities along the dorsal-ventral continuum by activating the spz ligand for the Tl receptor in the ventral region of the embryo. Nudel, pipe and windbeutel together trigger the protease cascade within the extraembryonic perivitelline compartment which induces dorsoventral polarity of the Drosophila embryo [].

>PF03761 DUF316: Domain of unknown function (DUF316) ; InterPro: IPR005514 This is a family of uncharacterised proteins from Caenorhabditis elegans

Probab=98.40  E-value=4.4e-07  Score=65.43  Aligned_cols=55  Identities=29%  Similarity=0.709  Sum_probs=44.5

Q ss_pred             CCCCcc--CCCceeCCEEcCCCCCceEEEEEeCCc----eeEEEEEecCCEEEecccccCC
Q psy12894         37 ACGQVE--RNQRIVGGNVTKLHEFPWIAALTKKGK----FYCGATLIAKRHVLTAAHCIEG   91 (124)
Q Consensus        37 ~cg~~~--~~~ri~gg~~~~~~~~Pw~v~l~~~~~----~~CgGsLi~~~~vlTaahC~~~   91 (124)
                      .||...  ...++..|..+...+.||.+.+.....    ..++|+|||+|||||++||+..
T Consensus        30 ~CG~~~~~~~~~~~~g~~~~~~~~pW~v~v~~~~~~~~~~~~~gtlIS~RHiLtss~~~~~   90 (282)
T PF03761_consen   30 TCGKKKLPYPSKVFNGTPAESGEAPWAVSVYTKNHNEGNYFSTGTLISPRHILTSSHCVMN   90 (282)
T ss_pred             hcCCCCCCCcccccCCcccccCCCCCEEEEEeccCcccceecceEEeccCeEEEeeeEEEe
Confidence            799543  244578888888899999999977532    4579999999999999999974

>COG3591 V8-like Glu-specific endopeptidase [Amino acid transport and metabolism]

Probab=96.21  E-value=0.009  Score=42.75  Aligned_cols=39  Identities=38%  Similarity=0.629  Sum_probs=29.0

Q ss_pred             CCCCCceEEEEEeC---CceeEEEEEecCCEEEecccccCCC
Q psy12894         54 KLHEFPWIAALTKK---GKFYCGATLIAKRHVLTAAHCIEGV   92 (124)
Q Consensus        54 ~~~~~Pw~v~l~~~---~~~~CgGsLi~~~~vlTaahC~~~~   92 (124)
                      ....|||-+-....   +..-|+++||+++-+||++||+...
T Consensus        45 dt~~~Py~av~~~~~~tG~~~~~~~lI~pntvLTa~Hc~~s~   86 (251)
T COG3591          45 DTTQFPYSAVVQFEAATGRLCTAATLIGPNTVLTAGHCIYSP   86 (251)
T ss_pred             cCCCCCcceeEEeecCCCcceeeEEEEcCceEEEeeeEEecC
Confidence            34568988766542   3345666999999999999999753

>PF13365 Trypsin_2: Trypsin-like peptidase domain; PDB: 1Y8T_A 2Z9I_A 3QO6_A 1L1J_A 1QY6_A 2O8L_A 3OTP_E 2ZLE_I 1KY9_A 3CS0_A

Probab=95.71  E-value=0.016  Score=35.75  Aligned_cols=20  Identities=40%  Similarity=0.464  Sum_probs=18.5

Q ss_pred             EEEEEecCC-EEEecccccCC
Q psy12894         72 CGATLIAKR-HVLTAAHCIEG   91 (124)
Q Consensus        72 CgGsLi~~~-~vlTaahC~~~   91 (124)
                      |.|.+|.++ ++||++||+..
T Consensus         1 GTGf~i~~~g~ilT~~Hvv~~   21 (120)
T PF13365_consen    1 GTGFLIGPDGYILTAAHVVED   21 (120)
T ss_dssp             EEEEEEETTTEEEEEHHHHTC
T ss_pred             CEEEEEcCCceEEEchhheec
Confidence            689999999 99999999975

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	124
1qrz_A	246	Catalytic Domain Of Plasminogen Length = 246		2e-10
4dur_A	791	The X-Ray Crystal Structure Of Full-Length Type Ii		3e-10
1bui_B	250	Structure Of The Ternary Microplasmin-Staphylokinas		3e-10
1bml_A	250	Complex Of The Catalytic Domain Of Human Plasmin An		3e-10
1l4z_A	248	X-Ray Crystal Structure Of The Complex Of Microplas		3e-10
1l4d_A	249	Crystal Structure Of Microplasminogen-streptokinase		4e-10
3uir_A	247	Crystal Structure Of The Plasmin-Textilinin-1 Compl		4e-10
1ddj_A	247	Crystal Structure Of Human Plasminogen Catalytic Do		4e-10
2xxl_A	408	Crystal Structure Of Drosophila Grass Clip Serine P		4e-10
1fy3_A	225	[g175q]hbp, A Mutant Of Human Heparin Binding Prote		1e-09
1a7s_A	225	Atomic Resolution Structure Of Hbp Length = 225		1e-09
1rjx_B	247	Human Plasminogen Catalytic Domain, K698m Mutant Le		2e-09
1ym0_A	238	Crystal Structure Of Earthworm Fibrinolytic Enzyme		6e-09
1fuj_A	221	Pr3 (Myeloblastin) Length = 221		8e-09
1fy1_A	225	[r23s,F25e]hbp, A Mutant Of Human Heparin Binding P		1e-08
1fdp_A	235	Proenzyme Of Human Complement Factor D, Recombinant		2e-08
1ppg_E	218	The Refined 2.3 Angstroms Crystal Structure Of Huma		5e-08
1hne_E	218	Structure Of Human Neutrophil Elastase In Complex W		5e-08
2rg3_A	218	Covalent Complex Structure Of Elastase Length = 218		5e-08
4d9q_A	228	Inhibiting Alternative Pathway Complement Activatio		6e-08
1ppf_E	218	X-Ray Crystal Structure Of The Complex Of Human Leu		6e-08
2xwa_A	228	Crystal Structure Of Complement Factor D Mutant R20		7e-08
4dgj_A	235	Structure Of A Human Enteropeptidase Light Chain Va		8e-08
1gdu_A	224	Fusarium Oxysporum Trypsin At Atomic Resolution Len		8e-08
1dsu_A	228	Human Factor D, Complement Activating Enzyme Length		8e-08
1ppz_A	224	Trypsin Complexes At Atomic And Ultra-High Resoluti		8e-08
2xw9_A	228	Crystal Structure Of Complement Factor D Mutant S18		8e-08
1dst_A	228	Mutant Of Factor D With Enhanced Catalytic Activity		9e-08
1ekb_B	235	The Serine Protease Domain Of Enteropeptidase Bound		9e-08
1b0f_A	218	Crystal Structure Of Human Neutrophil Elastase With		1e-07
3h7t_A	235	Crystal Structure Of Scabies Mite Inactivated Prote		2e-07
1spj_A	238	Structure Of Mature Human Tissue Kallikrein (Human		2e-07
1xvm_A	224	Trypsin From Fusarium Oxysporum- Room Temperature T		3e-07
1elt_A	236	Structure Of Native Pancreatic Elastase From North		3e-07
1gvz_A	237	Prostate Specific Antigen (Psa) From Stallion Semin		4e-07
2b9l_A	394	Crystal Structure Of Prophenoloxidase Activating Fa		9e-07
2bq6_B	249	Crystal Structure Of Factor Xa In Complex With 21 L		1e-06
2olg_A	278	Crystal Structure Of The Serine Protease Domain Of		1e-06
1pyt_D	251	Ternary Complex Of Procarboxypeptidase A, Proprotei		2e-06
3gyl_B	261	Structure Of Prostasin At 1.3 Angstroms Resolution		2e-06
3e0p_B	271	The X-Ray Structure Of Human Prostasin In Complex W		2e-06
2wph_S	235	Factor Ixa Superactive Triple Mutant Length = 235		2e-06
2wpi_S	235	Factor Ixa Superactive Double Mutant Length = 235		2e-06
1pfx_C	235	Porcine Factor Ixa Length = 235		2e-06
1ybw_A	283	Protease Domain Of Hgfa With No Inhibitor Length =		2e-06
2wpm_S	235	Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Le		2e-06
1rfn_A	235	Human Coagulation Factor Ixa In Complex With P-Amin		2e-06
3t2n_A	372	Human Hepsin Protease In Complex With The Fab Fragm		2e-06
3dfj_A	263	Crystal Structure Of Human Prostasin Length = 263		2e-06
3kcg_H	235	Crystal Structure Of The Antithrombin-Factor Ixa- P		2e-06
1z8g_A	372	Crystal Structure Of The Extracellular Region Of Th		2e-06
1bru_P	241	Structure Of Porcine Pancreatic Elastase Complexed		2e-06
3f6u_H	240	Crystal Structure Of Human Activated Protein C (Apc		3e-06
1aut_C	250	Human Activated Protein C Length = 250		3e-06
1npm_A	225	Neuropsin, A Serine Protease Expressed In The Limbi		5e-06
1eq9_A	222	Crystal Structure Of Fire Ant Chymotrypsin Complexe		5e-06
1dan_H	254	Complex Of Active Site Inhibited Human Blood Coagul		5e-06
2f83_A	625	Crystal Structure At 2.9 Angstroms Resolution Of Hu		7e-06
1azz_A	226	Fiddler Crab Collagenase Complexed To Ecotin Length		7e-06
1xka_C	235	Factor Xa Complexed With A Synthetic Inhibitor Fx-2		7e-06
2y5f_A	234	Factor Xa - Cation Inhibitor Complex Length = 234		7e-06
1mq5_A	233	Crystal Structure Of 3-chloro-n-[4-chloro-2-[[(4-ch		7e-06
1fjs_A	234	Crystal Structure Of The Inhibitor Zk-807834 (Ci-10		7e-06
2bok_A	241	Factor Xa- Cation Length = 241		8e-06
3ens_B	238	Crystal Structure Of Human Fxa In Complex With Meth		8e-06
1mza_A	240	Crystal Structure Of Human Pro-Granzyme K Length =		8e-06
1hcg_A	241	Structure Of Human Des(1-45) Factor Xa At 2.2 Angst		9e-06
2gd4_H	241	Crystal Structure Of The Antithrombin-S195a Factor		9e-06
4igd_A	406	Crystal Structure Of The Zymogen Catalytic Region O		1e-05
2oq5_A	232	Crystal Structure Of Desc1, A New Member Of The Typ		1e-05
3rp2_A	224	The Structure Of Rat Mast Cell Protease Ii At 1.9-A		1e-05
1ezq_A	254	Crystal Structure Of Human Coagulation Factor Xa Co		1e-05
1c5m_D	255	Structural Basis For Selectivity Of A Small Molecul		1e-05
2cga_A	245	Bovine Chymotrypsinogen A. X-Ray Crystal Structure		1e-05
1a5i_A	265	Catalytic Domain Of Vampire Bat (Desmodus Rotundus)		1e-05
1o5e_H	255	Dissecting And Designing Inhibitor Selectivity Dete		1e-05
1a0l_A	244	Human Beta-Tryptase: A Ring-Like Tetramer With Acti		1e-05
2zeb_A	243	Potent, Nonpeptide Inhibitors Of Human Mast Cell Tr		1e-05
4h4f_A	249	Crystal Structure Of Human Chymotrypsin C (ctrc) Bo		1e-05
2bm2_A	245	Human Beta-Ii Tryptase In Complex With 4-(3-Aminome		1e-05
4an7_A	231	Kunitz Type Trypsin Inhibitor Complex With Porcine		1e-05
1fxy_A	228	Coagulation Factor Xa-Trypsin Chimera Inhibited Wit		1e-05
3fzz_A	227	Structure Of Grc Length = 227		1e-05
3g01_A	227	Structure Of Grc Mutant E192rE193G Length = 227		1e-05
1kdq_A	131	Crystal Structure Analysis Of The Mutant S189d Rat		1e-05
3nxp_A	424	Crystal Structure Of Human Prethrombin-1 Length = 4		1e-05
2f9n_A	245	Crystal Structure Of The Recombinant Human Alpha I		2e-05
2f9o_A	245	Crystal Structure Of The Recombinant Human Alpha I		2e-05
1lto_A	245	Human Alpha1-Tryptase Length = 245		2e-05
3gov_B	251	Crystal Structure Of The Catalytic Region Of Human		2e-05
1euf_A	227	Bovine Duodenase(New Serine Protease), Crystal Stru		2e-05
2zgc_A	240	Crystal Structure Of Active Human Granzyme M Length		2e-05
2zgj_A	240	Crystal Structure Of D86n-gzmm Complexed With Its O		2e-05
2any_A	241	Expression, Crystallization And The Three-Dimension		2e-05
1md8_A	329	Monomeric Structure Of The Active Catalytic Domain		2e-05
1md7_A	328	Monomeric Structure Of The Zymogen Of Complement Pr		2e-05
3tgj_E	233	S195a Trypsinogen Complexed With Bovine Pancreatic		3e-05
2anw_A	241	Expression, Crystallization And Three-Dimensional S		3e-05
1fax_A	254	Coagulation Factor Xa Inhibitor Complex Length = 25		3e-05
1co7_E	245	R117h Mutant Rat Anionic Trypsin Complexed With Bov		3e-05
1pyt_C	253	Ternary Complex Of Procarboxypeptidase A, Proprotei		3e-05
2psx_A	227	Crystal Structure Of Human Kallikrein 5 In Complex		3e-05
2jet_B	128	Crystal Structure Of A Trypsin-Like Mutant (S189d,		3e-05
3ela_H	254	Crystal Structure Of Active Site Inhibited Coagulat		3e-05
2f91_A	237	1.2a Resolution Structure Of A Crayfish Trypsin Com		3e-05
1au8_A	224	Human Cathepsin G Length = 224		3e-05
1kyn_B	235	Cathepsin-G Length = 235		4e-05
3tju_A	226	Crystal Structure Of Human Granzyme H With An Inhib		4e-05
4gaw_A	226	Crystal Structure Of Active Human Granzyme H Length		4e-05
1zjd_A	237	Crystal Structure Of The Catalytic Domain Of Coagul		4e-05
1mh0_A	287	Crystal Structure Of The Anticoagulant Slow Form Of		4e-05
2bdy_A	289	Thrombin In Complex With Inhibitor Length = 289		4e-05
1zlr_A	237	Factor Xi Catalytic Domain Complexed With 2-Guanidi		4e-05
1xx9_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		4e-05
1zpz_A	238	Factor Xi Catalytic Domain Complexed With N-((R)-1-		4e-05
1zhm_A	238	Crystal Structure Of The Catalytic Domain Of The Co		4e-05
1zhp_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		4e-05
1d9i_A	288	Structure Of Thrombin Complexed With Selective Non-		4e-05
3sor_A	238	Factor Xia In Complex With A Clorophenyl-tetrazole		4e-05
3bg8_A	238	Crystal Structure Of Factor Xia In Complex With Cla		4e-05
1klt_A	226	Crystal Structure Of Pmsf-Treated Human Chymase At		4e-05
1eoj_A	289	Design Of P1' And P3' Residues Of Trivalent Thrombi		4e-05
1zhr_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		4e-05
1jwt_A	305	Crystal Structure Of Thrombin In Complex With A Nov		4e-05
3sqe_E	290	Crystal Structure Of Prethrombin-2 Mutant S195a In		4e-05
1elv_A	333	Crystal Structure Of The Catalytic Domain Of Human		4e-05
1mct_A	223	The Refined 1.6 Angstroms Resolution Crystal Struct		5e-05
1d6w_A	287	Structure Of Thrombin Complexed With Selective Non-		5e-05
1xxd_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		5e-05
1nm6_A	287	Thrombin In Complex With Selective Macrocyclic Inhi		5e-05
1nu9_A	291	Staphylocoagulase-prethrombin-2 Complex Length = 29		5e-05
1dm4_B	260	Ser195ala Mutant Of Human Thrombin Complexed With F		5e-05
1hag_E	295	The Isomorphous Structures Of Prethrombin2, Hirugen		5e-05
3k65_B	308	Crystal Structure Of Prethombin-2FRAGMENT-2 Complex		5e-05
1tfx_A	223	Complex Of The Second Kunitz Domain Of Tissue Facto		5e-05
1an1_E	223	Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Len		5e-05
1sc8_U	262	Urokinase Plasminogen Activator B-Chain-J435 Comple		5e-05
1mtn_B	131	Bovine Alpha-Chymotrypsin:bpti Crystallization Leng		5e-05
1op0_A	234	Crystal Structure Of Aav-sp-i, A Glycosylated Snake		5e-05
2xrc_A	565	Human Complement Factor I Length = 565		5e-05
1aks_A	125	Crystal Structure Of The First Active Autolysate Fo		6e-05
3myw_A	223	The Bowman-Birk Type Inhibitor From Mung Bean In Te		6e-05
1f7z_A	233	Rat Trypsinogen K15a Complexed With Bovine Pancreat		6e-05
1dlk_B	230	Crystal Structure Analysis Of Delta-Chymotrypsin Bo		6e-05
1bda_A	265	Catalytic Domain Of Human Single Chain Tissue Plasm		7e-05
2zch_P	237	Crystal Structure Of Human Prostate Specific Antige		7e-05
4e7n_A	238	Crystal Structure Of Ahv_tl-I, A Glycosylated Snake		7e-05
4gso_A	232	Structure Of Jararacussin-I Length = 232		7e-05
1fi8_A	228	Rat Granzyme B [n66q] Complexed To Ecotin [81-84 Ie		7e-05
1op8_A	234	Crystal Structure Of Human Granzyme A Length = 234		8e-05
1orf_A	234	The Oligomeric Structure Of Human Granzyme A Reveal		8e-05
1h4w_A	224	Structure Of Human Trypsin Iv (Brain Trypsin) Lengt		8e-05
2bdg_A	223	Human Kallikrein 4 Complex With Nickel And P-aminob		9e-05
2r9p_A	224	Human Mesotrypsin Complexed With Bovine Pancreatic		9e-05
1gpz_A	399	The Crystal Structure Of The Zymogen Catalytic Doma		9e-05
1a0j_A	223	Crystal Structure Of A Non-Psychrophilic Trypsin Fr		9e-05
1op2_A	234	Crystal Structure Of Aav-Sp-Ii, A Glycosylated Snak		1e-04
2hnt_C	70	Crystallographic Structure Of Human Gamma-Thrombin		1e-04
1mkw_K	308	The Co-Crystal Structure Of Unliganded Bovine Alpha		1e-04
3s9a_A	234	Russell's Viper Venom Serine Proteinase, Rvv-V (Clo		1e-04
1nn6_A	228	Human Pro-Chymase Length = 228		1e-04
4afq_A	226	Human Chymase - Fynomer Complex Length = 226		1e-04
2vnt_A	276	Urokinase-Type Plasminogen Activator Inhibitor Comp		1e-04
3n7o_A	226	X-Ray Structure Of Human Chymase In Complex With Sm		1e-04
2kai_A	80	Refined 2.5 Angstroms X-Ray Crystal Structure Of Th		1e-04
1pjp_A	226	The 2.2 A Crystal Structure Of Human Chymase In Com		1e-04
1vzq_H	250	Complex Of Thrombin With Designed Inhibitor 7165 Le		1e-04
4dg4_A	224	Human Mesotrypsin-S39y Complexed With Bovine Pancre		1e-04
1bhx_B	147	X-Ray Structure Of The Complex Of Human Alpha Throm		2e-04
2a31_A	223	Trypsin In Complex With Borate Length = 223		2e-04
1h8d_H	260	X-Ray Structure Of The Human Alpha-Thrombin Complex		2e-04
3r3g_B	259	Structure Of Human Thrombin With Residues 145-150 O		2e-04
4f4o_C	347	Structure Of The Haptoglobin-Haemoglobin Complex Le		2e-04
2od3_B	259	Human Thrombin Chimera With Human Residues 184a, 18		2e-04
1tq0_B	257	Crystal Structure Of The Potent Anticoagulant Throm		2e-04
1qur_H	257	Human Alpha-Thrombin In Complex With Bivalent, Benz		2e-04
3gic_B	250	Structure Of Thrombin Mutant Delta(146-149e) In The		2e-04
1b7x_B	259	Structure Of Human Alpha-Thrombin Y225i Mutant Boun		2e-04
2a0q_B	257	Structure Of Thrombin In 400 Mm Potassium Chloride		2e-04
2bvr_H	252	Human Thrombin Complexed With Fragment-based Small		2e-04
2thf_B	259	Structure Of Human Alpha-thrombin Y225f Mutant Boun		2e-04
1bth_H	259	Structure Of Thrombin Complexed With Bovine Pancrea		2e-04
1z8i_B	259	Crystal Structure Of The Thrombin Mutant G193a Boun		2e-04
1abi_H	259	Structure Of The Hirulog 3-Thrombin Complex And Nat		2e-04
1wbg_B	259	Active Site Thrombin Inhibitors Length = 259		2e-04
1h8i_H	253	X-Ray Crystal Structure Of Human Alpha-Thrombin Wit		2e-04
1gj5_H	258	Selectivity At S1, H2o Displacement, Upa, Tpa, Ser1		2e-04
3ee0_B	259	Crystal Structure Of The W215aE217A MUTANT OF HUMAN		2e-04
1z8j_B	259	Crystal Structure Of The Thrombin Mutant G193p Boun		2e-04
1sfq_B	259	Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack		2e-04
2gp9_B	259	Crystal Structure Of The Slow Form Of Thrombin In A		2e-04
1jou_B	259	Crystal Structure Of Native S195a Thrombin With An		2e-04
1rd3_B	259	2.5a Structure Of Anticoagulant Thrombin Variant E2		2e-04
1thp_B	259	Structure Of Human Alpha-Thrombin Y225p Mutant Boun		2e-04
2pgb_B	259	Inhibitor-Free Human Thrombin Mutant C191a-C220a Le		2e-04
1twx_B	259	Crystal Structure Of The Thrombin Mutant D221aD222K		2e-04
3jz1_B	259	Crystal Structure Of Human Thrombin Mutant N143p In		2e-04
1j15_A	223	Benzamidine In Complex With Rat Trypsin Mutant X991		2e-04
3mwi_U	246	The Complex Crystal Structure Of Urokianse And 5-Ni		2e-04
3ig6_B	253	Low Molecular Weigth Human Urokinase Type Plasminog		2e-04
1w0z_U	247	Urokinase Type Plasminogen Activator Length = 247		2e-04
1trm_A	223	The Three-Dimensional Structure Of Asn102 Mutant Of		3e-04
1ejn_A	253	Urokinase Plasminogen Activator B-Chain Inhibitor C		3e-04
1ql9_A	223	Factor Xa Specific Inhibitor In Complex With Rat Tr		3e-04
2nwn_A	253	New Pharmacophore For Serine Protease Inhibition Re		3e-04
4fu7_A	246	Crystal Structure Of The Urokinase Length = 246		3e-04
2o8u_A	253	Crystal Structure And Binding Epitopes Of Urokinase		3e-04
1dpo_A	223	Structure Of Rat Trypsin Length = 223		3e-04
1amh_A	223	Uncomplexed Rat Trypsin Mutant With Asp 189 Replace		3e-04
1ezs_C	223	Crystal Structure Of Ecotin Mutant M84r, W67a, G68a		3e-04
3tgi_E	223	Wild-Type Rat Anionic Trypsin Complexed With Bovine		3e-04
1brb_E	223	Crystal Structures Of Rat Anionic Trypsin Complexed		3e-04
1and_A	223	Anionic Trypsin Mutant With Arg 96 Replaced By His		3e-04
1vr1_H	261	Specifity For Plasminogen Activator Inhibitor-1 Len		3e-04
1anb_A	223	Anionic Trypsin Mutant With Ser 214 Replaced By Glu		3e-04
1k9o_E	223	Crystal Structure Of Michaelis Serpin-Trypsin Compl		3e-04
1anc_A	223	Anionic Trypsin Mutant With Ser 214 Replaced By Lys		3e-04
1slw_B	223	Rat Anionic N143h, E151h Trypsin Complexed To A86h		3e-04
1slx_B	223	Rat Anionic N143h, E151h Trypsin Complexed To A86h		3e-04
3edx_B	258	Crystal Structure Of The W215aE217A MUTANT OF MURIN		3e-04
2ocv_B	259	Structural Basis Of Na+ Activation Mimicry In Murin		3e-04
3bn9_B	241	Crystal Structure Of Mt-Sp1 In Complex With Fab Inh		3e-04
3p8g_A	241	Crystal Structure Of Mt-Sp1 In Complex With Benzami		3e-04
1eaw_A	241	Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (A		3e-04
2pux_B	258	Crystal Structure Of Murine Thrombin In Complex Wit		3e-04
2wub_A	257	Crystal Structure Of Hgfa In Complex With The Allos		4e-04
2r0l_A	248	Short Form Hgfa With Inhibitory Fab75 Length = 248		4e-04
1tgs_Z	229	Three-Dimensional Structure Of The Complex Between		4e-04
1fq3_A	227	Crystal Structure Of Human Granzyme B Length = 227		4e-04
1zzz_A	237	Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes		4e-04
3i78_A	229	3599170186220-Loops Of Fxa In Sgt Length = 229		4e-04
1owd_A	245	Substituted 2-naphthamidine Inhibitors Of Urokinase		4e-04
3i77_A	230	3599170-Loops Of Fxa In Sgt Length = 230		4e-04
1owe_A	245	Substituted 2-Naphthamidine Inhibitors Of Urokinase		4e-04
1gi8_B	245	A Novel Serine Protease Inhibition Motif Involving		4e-04
1f0t_A	243	Bovine Trypsin Complexed With Rpr131247 Length = 24		5e-04
1bbr_H	150	The Structure Of Residues 7-16 Of The A Alpha Chain		5e-04
1fon_A	240	Crystal Structure Of Bovine Procarboxypeptidase A-S		5e-04
1fv9_A	245	Crystal Structure Of Human Microurokinase In Comple		5e-04
1iau_A	227	Human Granzyme B In Complex With Ac-Iepd-Cho Length		5e-04
1bbr_K	259	The Structure Of Residues 7-16 Of The A Alpha Chain		5e-04
1lmw_B	253	Lmw U-Pa Structure Complexed With Egrcmk (Glu-Gly-A		5e-04
1oph_B	243	Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh		5e-04
1dx5_M	259	Crystal Structure Of The Thrombin-Thrombomodulin Co		5e-04
1id5_H	256	Crystal Structure Of Bovine Thrombin Complex With P		5e-04
1gj7_B	253	Engineering Inhibitors Highly Selective For The S1		5e-04
1o5a_B	253	Dissecting And Designing Inhibitor Selectivity Dete		5e-04
1sgf_G	237	Crystal Structure Of 7s Ngf: A Complex Of Nerve Gro		6e-04
1kig_H	241	Bovine Factor Xa Length = 241		7e-04
1rtf_B	252	Complex Of Benzamidine With The Catalytic Domain Of		7e-04
1utj_A	242	Trypsin Specificity As Elucidated By Lie Calculatio		8e-04

>pdb|1QRZ|A Chain A, Catalytic Domain Of Plasminogen Length = 246

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +   R+VGG V   H +PW  +L T+ G+ +CG TLI+   VLTAAHC+E
Sbjct: 2   DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGQHFCGGTLISPEWVLTAAHCLE 61
Query: 91  -GVNPKEIKVTLGEHDRL 107
               P   KV LG H  +
Sbjct: 62  KSPRPSSYKVILGAHQEV 79

>pdb|4DUR|A Chain A, The X-Ray Crystal Structure Of Full-Length Type Ii Human Plasminogen Length = 791

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +   R+VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC+E
Sbjct: 547 DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 606
Query: 91  -GVNPKEIKVTLGEHDRLS 108
               P   KV LG H  ++
Sbjct: 607 KSPRPSSYKVILGAHQEVN 625

>pdb|1BUI|B Chain B, Structure Of The Ternary Microplasmin-Staphylokinase-Microplasmin Complex: A Proteinase-Cofactor-Substrate Complex In Action Length = 250

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +   R+VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC+E
Sbjct: 6   DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 65
Query: 91  -GVNPKEIKVTLGEHDRL 107
               P   KV LG H  +
Sbjct: 66  KSPRPSSYKVILGAHQEV 83

>pdb|1BML|A Chain A, Complex Of The Catalytic Domain Of Human Plasmin And Streptokinase Length = 250

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +   R+VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC+E
Sbjct: 6   DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 65
Query: 91  -GVNPKEIKVTLGEHDRL 107
               P   KV LG H  +
Sbjct: 66  KSPRPSSYKVILGAHQEV 83

>pdb|1L4Z|A Chain A, X-Ray Crystal Structure Of The Complex Of Microplasminogen With Alpha Domain Of Streptokinase In The Presence Cadmium Ions Length = 248

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +   R+VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC+E
Sbjct: 4   DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 63
Query: 91  -GVNPKEIKVTLGEHDRL 107
               P   KV LG H  +
Sbjct: 64  KSPRPSSYKVILGAHQEV 81

>pdb|1L4D|A Chain A, Crystal Structure Of Microplasminogen-streptokinase Alpha Domain Complex Length = 249

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +   R+VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC+E
Sbjct: 5   DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 64
Query: 91  -GVNPKEIKVTLGEHDRL 107
               P   KV LG H  +
Sbjct: 65  KSPRPSSYKVILGAHQEV 82

>pdb|3UIR|A Chain A, Crystal Structure Of The Plasmin-Textilinin-1 Complex Length = 247

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +   R+VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC+E
Sbjct: 3   DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 62
Query: 91  -GVNPKEIKVTLGEHDRL 107
               P   KV LG H  +
Sbjct: 63  KSPRPSSYKVILGAHQEV 80

>pdb|1DDJ|A Chain A, Crystal Structure Of Human Plasminogen Catalytic Domain Length = 247

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +   R+VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC+E
Sbjct: 3   DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 62
Query: 91  -GVNPKEIKVTLGEHDRL 107
               P   KV LG H  +
Sbjct: 63  KSPRPSSYKVILGAHQEV 80

>pdb|2XXL|A Chain A, Crystal Structure Of Drosophila Grass Clip Serine Protease Of Toll Pathway Length = 408

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 20  NVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKK----GKFYCGAT 75
           N+   + + S     N  CG    +QR+  G   KL   PW+A L  +     +F CG  
Sbjct: 93  NIQHNSKVMSLFKDENFDCGNF-LSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGA 151
Query: 76  LIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE 111
           +I++R++LTAAHC+ G+     ++ LGEH R+S  E
Sbjct: 152 MISERYILTAAHCVHGLQNDLYEIRLGEH-RISTEE 186

>pdb|1FY3|A Chain A, [g175q]hbp, A Mutant Of Human Heparin Binding Protein (cap37) Length = 225

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   +  +FP++A++  +G+ +CG  LI  R V+TAA C +  NP    V LG +D
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYD 59

>pdb|1A7S|A Chain A, Atomic Resolution Structure Of Hbp Length = 225

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   +  +FP++A++  +G+ +CG  LI  R V+TAA C +  NP    V LG +D
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYD 59

>pdb|1RJX|B Chain B, Human Plasminogen Catalytic Domain, K698m Mutant Length = 247

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 35  NCACGQVERNQ---RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           +C   QVE  +    +VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC+E
Sbjct: 3   DCGKPQVEPKKCPGAVVGGCVAYPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLE 62
Query: 91  -GVNPKEIKVTLGEHDRL 107
               P   KV LG H  +
Sbjct: 63  KSPRPSSYKVILGAHQEV 80

>pdb|1YM0|A Chain A, Crystal Structure Of Earthworm Fibrinolytic Enzyme Component B: A Novel, Glycosylated Two-chained Trypsin Length = 238

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK--FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           IVGG   + +EFPW  ++ +K     +CG ++I  R V+ AAHC++G  P  + + +GEH
Sbjct: 1   IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEH 60
Query: 105 D 105
           D
Sbjct: 61  D 61

>pdb|1FUJ|A Chain A, Pr3 (Myeloblastin) Length = 221

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           IVGG+  + H  P++A+L  +G     +CG TLI    VLTAAHC+  +  + + V LG 
Sbjct: 1   IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGA 60
Query: 104 HDRLSKNESVPVIIHFSVSN 123
           H+  ++    P   HFSV+ 
Sbjct: 61  HNVRTQE---PTQQHFSVAQ 77

>pdb|1FY1|A Chain A, [r23s,F25e]hbp, A Mutant Of Human Heparin Binding Protein (Cap37) Length = 225

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   +  +FP++A++  +G   CG  LI  R V+TAA C +  NP    V LG +D
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGSHECGGALIHARFVMTAASCFQSQNPGVSTVVLGAYD 59

>pdb|1FDP|A Chain A, Proenzyme Of Human Complement Factor D, Recombinant Profactor D Length = 235

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           RI+GG   + H  P++A++   G   CG  L+A++ VL+AAHC+E     +++V LG H 
Sbjct: 7   RILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHS 66
Query: 106 RLSKNE 111
            LS+ E
Sbjct: 67  -LSQPE 71

>pdb|1PPG|E Chain E, The Refined 2.3 Angstroms Crystal Structure Of Human Leukocyte Elastase In A Complex With A Valine Chloromethyl Ketone Inhibitor Length = 218

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H +P++ +L  +G  +CGATLIA   V++AAHC+  VN + ++V LG H+ 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHN- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSRRE 64

>pdb|1HNE|E Chain E, Structure Of Human Neutrophil Elastase In Complex With A Peptide Chloromethyl Ketone Inhibitor At 1.84-Angstroms Resolution Length = 218

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H +P++ +L  +G  +CGATLIA   V++AAHC+  VN + ++V LG H+ 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHN- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSRRE 64

>pdb|2RG3|A Chain A, Covalent Complex Structure Of Elastase Length = 218

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H +P++ +L  +G  +CGATLIA   V++AAHC+  VN + ++V LG H+ 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHN- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSRRE 64

>pdb|4D9Q|A Chain A, Inhibiting Alternative Pathway Complement Activation By Targeting The Exosite On Factor D Length = 228

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + H  P++A++   G+  CG  L+A++ VL+AAHC+E     +++V LG H  
Sbjct: 1   ILGGREAEAHARPYMASVQVNGEHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHS- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSQPE 64

>pdb|1PPF|E Chain E, X-Ray Crystal Structure Of The Complex Of Human Leukocyte Elastase (Pmn Elastase) And The Third Domain Of The Turkey Ovomucoid Inhibitor Length = 218

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H +P++ +L  +G  +CGATLIA   V++AAHC+  VN + ++V LG H+ 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHN- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSRRE 64

>pdb|2XWA|A Chain A, Crystal Structure Of Complement Factor D Mutant R202a Length = 228

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + H  P++A++   G   CG  L+A++ VL+AAHC+E     +++V LG H  
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHS- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSQPE 64

>pdb|4DGJ|A Chain A, Structure Of A Human Enteropeptidase Light Chain Variant Length = 235

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN--PKEIKVTLGEH 104
           IVGG+  K   +PW+  L    +  CGA+L++   +++AAHC+ G N  P +    LG H
Sbjct: 1   IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLH 60
Query: 105 DR--LSKNESVPVII 117
            +  L+  ++VP +I
Sbjct: 61  MKSNLTSPQTVPRLI 75

>pdb|1GDU|A Chain A, Fusarium Oxysporum Trypsin At Atomic Resolution Length = 224

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG      +FP+I ++++ G  +CG +L+    VLTAAHC+ G      ++  G   R
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSR 60
Query: 107 LSKN 110
            S  
Sbjct: 61  TSGG 64

>pdb|1DSU|A Chain A, Human Factor D, Complement Activating Enzyme Length = 228

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + H  P++A++   G   CG  L+A++ VL+AAHC+E     +++V LG H  
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHS- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSQPE 64

>pdb|1PPZ|A Chain A, Trypsin Complexes At Atomic And Ultra-High Resolution Length = 224

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG      +FP+I ++++ G  +CG +L+    VLTAAHC+ G      ++  G   R
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSR 60
Query: 107 LSKN 110
            S  
Sbjct: 61  TSGG 64

>pdb|2XW9|A Chain A, Crystal Structure Of Complement Factor D Mutant S183a Length = 228

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + H  P++A++   G   CG  L+A++ VL+AAHC+E     +++V LG H  
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHS- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSQPE 64

>pdb|1DST|A Chain A, Mutant Of Factor D With Enhanced Catalytic Activity Length = 228

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + H  P++A++   G   CG  L+A++ VL+AAHC+E     +++V LG H  
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHS- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSQPE 64

>pdb|1EKB|B Chain B, The Serine Protease Domain Of Enteropeptidase Bound To Inhibitor Val- Asp-asp-asp-asp-lys-chloromethane Length = 235

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN--PKEIKVTLGEH 104
           IVGG+ ++   +PW+ AL    +  CGA+L+++  +++AAHC+ G N  P + K  LG H
Sbjct: 1   IVGGSDSREGAWPWVVALYFDDQQVCGASLVSRDWLVSAAHCVYGRNMEPSKWKAVLGLH 60
Query: 105 DRLSKNESVPVI 116
             ++ N + P I
Sbjct: 61  --MASNLTSPQI 70

>pdb|1B0F|A Chain A, Crystal Structure Of Human Neutrophil Elastase With Mdl 101, 146 Length = 218

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H +P++ +L   G  +CGATLIA   V++AAHC+  VN + ++V LG H+ 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLAGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHN- 59
Query: 107 LSKNE 111
           LS+ E
Sbjct: 60  LSRRE 64

>pdb|3H7T|A Chain A, Crystal Structure Of Scabies Mite Inactivated Protease Paralogue S-D1 (Smipp-S-D1) Length = 235

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG  + + + PW   +    K +CG +++    V+TAA C++G  P +I +  G   R
Sbjct: 1   IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYR 60
Query: 107 LSKNESV 113
            +K  SV
Sbjct: 61  TTKGTSV 67

>pdb|1SPJ|A Chain A, Structure Of Mature Human Tissue Kallikrein (Human Kallikrein 1 Or Klk1) At 1.70 Angstrom Resolution With Vacant Active Site Length = 238

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H  PW AAL     F CG  L+ ++ VLTAAHCI        ++ LG H+ 
Sbjct: 1   IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCIS----DNYQLWLGRHN- 55
Query: 107 LSKNESVPVIIHFSVS 122
           L  +E+    +H S S
Sbjct: 56  LFDDENTAQFVHVSES 71

>pdb|1XVM|A Chain A, Trypsin From Fusarium Oxysporum- Room Temperature To Atomic Resolution Length = 224

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 48  VGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRL 107
           VGG      +FP+I ++++ G  +CG +L+    VLTAAHC+ G      ++  G   R 
Sbjct: 2   VGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRT 61
Query: 108 SKN 110
           S  
Sbjct: 62  SGG 64

>pdb|1ELT|A Chain A, Structure Of Native Pancreatic Elastase From North Atlantic Salmon At 1.61 Angstroms Resolution Length = 236

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 47  IVGGNVTKLHEFPW-IAALTKKGKFY---CGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           +VGG V + + +PW I+   K G  Y   CG +LI +  V+TAAHC++  + +  +V LG
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVD--SARTWRVVLG 58
Query: 103 EHDRLSKNE 111
           EH+ L+ NE
Sbjct: 59  EHN-LNTNE 66

>pdb|1GVZ|A Chain A, Prostate Specific Antigen (Psa) From Stallion Seminal Plasma Length = 237

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + H  PW  A+  +G F CG  L+  + VLTAAHC+      + ++ LG H+ 
Sbjct: 1   IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMS----DDYQIWLGRHN- 55
Query: 107 LSKNE 111
           LSK+E
Sbjct: 56  LSKDE 60

>pdb|2B9L|A Chain A, Crystal Structure Of Prophenoloxidase Activating Factor-Ii From The Beetle Holotrichia Diomphalia Length = 394

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 51  NVTKLHEFPWIAALTK--------KGKFYCGATLIAKRHVLTAAHCIEGV--NPKEIKVT 100
           N  +  EFPW+ A+ K        + +  CG +LIA   VLT AHC+     N   IK+ 
Sbjct: 135 NEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIR 194
Query: 101 LGEHDRLSKNESVP--------VIIH 118
            GE D L++ E +P        VIIH
Sbjct: 195 AGEWDTLTEKERLPYQERKIRQVIIH 220

>pdb|2BQ6|B Chain B, Crystal Structure Of Factor Xa In Complex With 21 Length = 249

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 46  RIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           RIVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  
Sbjct: 15  RIVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG-- 70
Query: 105 DRLSKNESVPVIIH 118
           DR ++ E     +H
Sbjct: 71  DRNTEQEEGGEAVH 84

>pdb|2OLG|A Chain A, Crystal Structure Of The Serine Protease Domain Of Prophenoloxidase Activating Factor-I In A Zymogen Form Length = 278

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 38  CGQVERNQRIVGGNVTKLHEFPWIAALTKKG-----KFYCGATLIAKRHVLTAAHCIEGV 92
           CG      +I+ G+ T   EFPW A +  K      +F CG +LI  R+++TAAHC+ G 
Sbjct: 14  CGYQVEADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGR 73
Query: 93  NPKEI----KVTLGE 103
             + +    KV LGE
Sbjct: 74  VLRVVGALNKVRLGE 88

>pdb|1PYT|D Chain D, Ternary Complex Of Procarboxypeptidase A, Proproteinase E, And Chymotrypsinogen C Length = 251

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 34  CNCACGQVERNQRIVGGNVTKLHEFPWIAALT----KKGKFYCGATLIAKRHVLTAAHCI 89
           C     Q   + R+VGG     H +PW  +L        +  CG TLI   HVLTAAHCI
Sbjct: 1   CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60
Query: 90  EGVNPKEIKVTLGEHDRLSKNES 112
              N    +V LG+++   ++E+
Sbjct: 61  S--NTLTYRVALGKNNLEVEDEA 81

>pdb|3GYL|B Chain B, Structure Of Prostasin At 1.3 Angstroms Resolution In Complex With A Calcium Ion. Length = 261

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKE-IKVTLGEHD 105
           I GG+     ++PW  ++T +G   CG +L++++ VL+AAHC    + KE  +V LG H 
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQ 60
Query: 106 RLSKNESVPV 115
             S +E   V
Sbjct: 61  LDSYSEDAKV 70

>pdb|3E0P|B Chain B, The X-Ray Structure Of Human Prostasin In Complex With A Covalent Benzoxazole Inhibitor Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKE-IKVTLGEHD 105
           I GG+     ++PW  ++T +G   CG +L++++ VL+AAHC    + KE  +V LG H 
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQ 60
Query: 106 RLSKNESVPV 115
             S +E   V
Sbjct: 61  LDSYSEDAKV 70

>pdb|2WPH|S Chain S, Factor Ixa Superactive Triple Mutant Length = 235

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIE-GVNPKEIKVTLGEHD 105
           +VGG   K  +FPW   L  K   +CG +++ ++ ++TAAHC+E GV   +I V  GEH+
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGV---KITVVAGEHN 57

>pdb|2WPI|S Chain S, Factor Ixa Superactive Double Mutant Length = 235

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIE-GVNPKEIKVTLGEHD 105
           +VGG   K  +FPW   L  K   +CG +++ ++ ++TAAHC+E GV   +I V  GEH+
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGV---KITVVAGEHN 57

>pdb|1PFX|C Chain C, Porcine Factor Ixa Length = 235

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIE-GVNPKEIKVTLGEHD 105
           IVGG   K  +FPW   L  K   +CG ++I ++ V+TAAHCIE GV   +I V  GE++
Sbjct: 1   IVGGENAKPGQFPWQVLLNGKIDAFCGGSIINEKWVVTAAHCIEPGV---KITVVAGEYN 57

>pdb|1YBW|A Chain A, Protease Domain Of Hgfa With No Inhibitor Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 17  VDFNVDDLTTINSSMNHCNCACGQVERNQ-----RIVGGNVTKLHEFPWIAALTKKGKFY 71
           V  + D L T+    +    ACG+  + +     RI+GG+ +     PW+AA+   G  +
Sbjct: 1   VQLSPDLLATLPEPASPGRQACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYI-GDSF 59
Query: 72  CGATLIAKRHVLTAAHCIEGVNPKE-IKVTLGEH 104
           C  +L+    V++AAHC     P++ + V LG+H
Sbjct: 60  CAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQH 93

>pdb|2WPM|S Chain S, Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Length = 235

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIE-GVNPKEIKVTLGEHD 105
           +VGG   K  +FPW   L  K   +CG +++ ++ ++TAAHC+E GV   +I V  GEH+
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGV---KITVVAGEHN 57

>pdb|1RFN|A Chain A, Human Coagulation Factor Ixa In Complex With P-Amino Benzamidine Length = 235

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIE-GVNPKEIKVTLGEHD 105
           +VGG   K  +FPW   L  K   +CG +++ ++ ++TAAHC+E GV   +I V  GEH+
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGV---KITVVAGEHN 57

>pdb|3T2N|A Chain A, Human Hepsin Protease In Complex With The Fab Fragment Of An Inhibitory Antibody Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
           RIVGG  T L  +PW  +L   G   CG +L++   VLTAAHC    N
Sbjct: 117 RIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERN 164

>pdb|3DFJ|A Chain A, Crystal Structure Of Human Prostasin Length = 263

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKE-IKVTLGEHD 105
           I GG+     ++PW  ++T +G   CG +L++++ VL+AAHC    + KE  +V LG H 
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQ 60
Query: 106 RLSKNESVPV 115
             S +E   V
Sbjct: 61  LDSYSEDAKV 70

>pdb|3KCG|H Chain H, Crystal Structure Of The Antithrombin-Factor Ixa- Pentasaccharide Complex Length = 235

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIE-GVNPKEIKVTLGEHD 105
           +VGG   K  +FPW   L  K   +CG +++ ++ ++TAAHC+E GV   +I V  GEH+
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGV---KITVVAGEHN 57

>pdb|1Z8G|A Chain A, Crystal Structure Of The Extracellular Region Of The Transmembrane Serine Protease Hepsin With Covalently Bound Preferred Substrate Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
           RIVGG  T L  +PW  +L   G   CG +L++   VLTAAHC    N
Sbjct: 117 RIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERN 164

>pdb|1BRU|P Chain P, Structure Of Porcine Pancreatic Elastase Complexed With The Elastase Inhibitor Gr143783 Length = 241

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 47  IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           +VGG   + + +PW  +L    + + +  CG TL+ +  VLTAAHCI   + +  +V LG
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS--SSRTYRVVLG 58
Query: 103 EHDRLSKNESVPVIIHFS 120
            H  LS NE   + +  S
Sbjct: 59  RHS-LSTNEPGSLAVKVS 75

>pdb|3F6U|H Chain H, Crystal Structure Of Human Activated Protein C (Apc) Complexed With Ppack Length = 240

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 47  IVGGNVTKLHEFPW-IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           ++ G +T+  + PW +  L  K K  CGA LI    VLTAAHC++    K++ V LGE+D
Sbjct: 1   LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMD--ESKKLLVRLGEYD 58
Query: 106 --RLSKNE 111
             R  K E
Sbjct: 59  LRRWEKWE 66

>pdb|1AUT|C Chain C, Human Activated Protein C Length = 250

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 47  IVGGNVTKLHEFPW-IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           ++ G +T+  + PW +  L  K K  CGA LI    VLTAAHC++    K++ V LGE+D
Sbjct: 1   LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMD--ESKKLLVRLGEYD 58
Query: 106 --RLSKNE 111
             R  K E
Sbjct: 59  LRRWEKWE 66

>pdb|1NPM|A Chain A, Neuropsin, A Serine Protease Expressed In The Limbic System Of Mouse Brain Length = 225

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 56  HEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE 111
           H  PW AAL +  +  CG  L+  R VLTAAHC +    ++  V LG+H   S+++
Sbjct: 10  HSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKK----QKYSVRLGDHSLQSRDQ 61

>pdb|1EQ9|A Chain A, Crystal Structure Of Fire Ant Chymotrypsin Complexed To Pmsf Length = 222

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG    + ++P+  +L   G   CGA+++   +VLTAAHC++G+ N   +KV +G
Sbjct: 1   IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVG 57

>pdb|1DAN|H Chain H, Complex Of Active Site Inhibited Human Blood Coagulation Factor Viia With Human Recombinant Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 105
           IVGG V    E PW   L   G   CG TLI    V++AAHC + + N + +   LGEHD
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHD 60

>pdb|2F83|A Chain A, Crystal Structure At 2.9 Angstroms Resolution Of Human Plasma Coagulation Factor Xi Zymogen Length = 625

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 46  RIVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTL 101
           RIVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  
Sbjct: 387 RIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 446
Query: 102 G 102
           G
Sbjct: 447 G 447

>pdb|1AZZ|A Chain A, Fiddler Crab Collagenase Complexed To Ecotin Length = 226

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG     + +P  AAL     ++CG +LI+   +LTAAHC++G     + V LG H+ 
Sbjct: 1   IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDGAG--FVDVVLGAHN- 57
Query: 107 LSKNESVPVIIH 118
           + ++E+  V I 
Sbjct: 58  IREDEATQVTIQ 69

>pdb|1XKA|C Chain C, Factor Xa Complexed With A Synthetic Inhibitor Fx-2212a,(2s)-(3'- Amidino-3-Biphenylyl)-5-(4-Pyridylamino)pentanoic Acid Length = 235

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|2Y5F|A Chain A, Factor Xa - Cation Inhibitor Complex Length = 234

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|1MQ5|A Chain A, Crystal Structure Of 3-chloro-n-[4-chloro-2-[[(4-chlorophenyl) Amino]carbonyl]phenyl]-4-[(4-methyl-1- piperazinyl)methyl]-2- Thiophenecarboxamide Complexed With Human Factor Xa Length = 233

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|1FJS|A Chain A, Crystal Structure Of The Inhibitor Zk-807834 (Ci-1031) Complexed With Factor Xa Length = 234

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|2BOK|A Chain A, Factor Xa- Cation Length = 241

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|3ENS|B Chain B, Crystal Structure Of Human Fxa In Complex With Methyl (2z)-3-[(3- Chloro-1h-indol-7-yl)amino]-2-cyano-3-{[(3s)-2-oxo-1-(2- oxo-2- Pyrrolidin-1-ylethyl)azepan-3-yl]amino}acrylate Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|1MZA|A Chain A, Crystal Structure Of Human Pro-Granzyme K Length = 240

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHC----IEGVNPKEIKVTLG 102
           I+GG     H  P++A++   G   CG  LI  + VLTAAHC     +G +P    V LG
Sbjct: 3   IIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSP---TVVLG 59
Query: 103 EHDRLSKNES 112
            H  LSKNE+
Sbjct: 60  AHS-LSKNEA 68

>pdb|1HCG|A Chain A, Structure Of Human Des(1-45) Factor Xa At 2.2 Angstroms Resolution Length = 241

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|2GD4|H Chain H, Crystal Structure Of The Antithrombin-S195a Factor Xa-Pentasaccharide Complex Length = 241

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|4IGD|A Chain A, Crystal Structure Of The Zymogen Catalytic Region Of Human Masp-1 Length = 406

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 27  INSSMNHCNCACGQVERNQR----IVGGNVTKLHEFPWIAALTK-KGKFYCGATLIAKRH 81
           +  S+  C   CG  + +++    I  G   +    PWIA L+   G+ +CG +L+    
Sbjct: 132 LGRSLPTCLPVCGLPKFSRKLMAQIFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSW 191
Query: 82  VLTAAHCIEG--------------VNPKEIKVTLGEHDRLSKNES 112
           ++TAAHC+                ++P + K+ LG+H RL  +E+
Sbjct: 192 IVTAAHCLHQSLDPEDPTLRDSDLLSPSDFKIILGKHWRLRSDEN 236

>pdb|2OQ5|A Chain A, Crystal Structure Of Desc1, A New Member Of The Type Ii Transmembrane Serine Proteinases Family Length = 232

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG   +  E+PW A+L   G   CGATLI    +++AAHC     NP     + G
Sbjct: 1   IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFG 57

>pdb|3RP2|A Chain A, The Structure Of Rat Mast Cell Protease Ii At 1.9-Angstroms Resolution Length = 224

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKG-KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG  +  H  P++A L   T+KG +  CG  LI+++ VLTAAHC      +EI V LG
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHC----KGREITVILG 56
Query: 103 EHDRLSKNES 112
            HD + K ES
Sbjct: 57  AHD-VRKRES 65

>pdb|1EZQ|A Chain A, Crystal Structure Of Human Coagulation Factor Xa Complexed With Rpr128515 Length = 254

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|1C5M|D Chain D, Structural Basis For Selectivity Of A Small Molecule, S1- Binding, Sub-Micromolar Inhibitor Of Urokinase Type Plasminogen Activator Length = 255

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|2CGA|A Chain A, Bovine Chymotrypsinogen A. X-Ray Crystal Structure Analysis And Refinement Of A New Crystal Form At 1.8 Angstroms Resolution Length = 245

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           RIV G       +PW  +L  K  F +CG +LI +  V+TAAHC  GV   ++ V  GE 
Sbjct: 15  RIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHC--GVTTSDV-VVAGEF 71
Query: 105 DRLSKNESV 113
           D+ S +E +
Sbjct: 72  DQGSSSEKI 80

>pdb|1A5I|A Chain A, Catalytic Domain Of Vampire Bat (Desmodus Rotundus) Saliva Plasminogen Activator In Complex With Egr-Cmk (Glu-Gly-Arg Chloromethyl Ketone) Length = 265

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 48  VGGNVTKLHEFPWIAALTKKGK------FYCGATLIAKRHVLTAAHCI-EGVNPKEIKVT 100
            GG  T +   PW AA+  + +      F CG  LI+   VLTAAHC  E   P ++KV 
Sbjct: 15  TGGLFTDITSHPWQAAIFAQNRRSSGERFLCGGILISSCWVLTAAHCFQESYLPDQLKVV 74
Query: 101 LGEHDRLSKNE 111
           LG   R+   E
Sbjct: 75  LGRTYRVKPGE 85

>pdb|1O5E|H Chain H, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (ala190 Upa) Length = 255

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCI 89
          IVGG  T L  +PW  +L   G   CG +L++   VLTAAHC 
Sbjct: 1  IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCF 43

>pdb|1A0L|A Chain A, Human Beta-Tryptase: A Ring-Like Tetramer With Active Sites Facing A Central Pore Length = 244

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEGVNPKE---IKVT 100
           IVGG      ++PW  +L   G ++   CG +LI  + VLTAAHC+ G + K+   ++V 
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCV-GPDVKDLAALRVQ 59
Query: 101 LGEHDRLSKNESVPV 115
           L E     +++ +PV
Sbjct: 60  LREQHLYYQDQLLPV 74

>pdb|2ZEB|A Chain A, Potent, Nonpeptide Inhibitors Of Human Mast Cell Tryptase Length = 243

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEGVNPKE---IKVT 100
           IVGG      ++PW  +L   G ++   CG +LI  + VLTAAHC+ G + K+   ++V 
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCV-GPDVKDLAALRVQ 59
Query: 101 LGEHDRLSKNESVPV 115
           L E     +++ +PV
Sbjct: 60  LREQHLYYQDQLLPV 74

>pdb|4H4F|A Chain A, Crystal Structure Of Human Chymotrypsin C (ctrc) Bound To Inhibitor Eglin C From Hirudo Medicinalis Length = 249

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 47  IVGGNVTKLHEFPWIAALT----KKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           +VGG   + H +PW  +L        +  CG TLIA   VLTAAHCI   N +  +V +G
Sbjct: 1   VVGGEDARPHSWPWQISLQYLKNDTWRHTCGGTLIASNFVLTAAHCIS--NTRTYRVAVG 58
Query: 103 EHDRLSKNESVPVII 117
           +++   ++E   + +
Sbjct: 59  KNNLEVEDEEGSLFV 73

>pdb|2BM2|A Chain A, Human Beta-Ii Tryptase In Complex With 4-(3-Aminomethyl- Phenyl)-Piperidin-1-Yl-(5-Phenethyl- Pyridin-3-Yl)- Methanone Length = 245

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEGVNPKE---IKVT 100
           IVGG      ++PW  +L   G ++   CG +LI  + VLTAAHC+ G + K+   ++V 
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCV-GPDVKDLAALRVQ 59
Query: 101 LGEHDRLSKNESVPV 115
           L E     +++ +PV
Sbjct: 60  LREQHLYYQDQLLPV 74

>pdb|4AN7|A Chain A, Kunitz Type Trypsin Inhibitor Complex With Porcine Trypsin Length = 231

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 41  VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
            + + +IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V 
Sbjct: 3   TDDDDKIVGGYTCAANSIPYQVSL-NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVR 57
Query: 101 LGEH--DRLSKNE 111
           LGEH  D L  NE
Sbjct: 58  LGEHNIDVLEGNE 70

>pdb|1FXY|A Chain A, Coagulation Factor Xa-Trypsin Chimera Inhibited With D-Phe-Pro-Arg- Chloromethylketone Length = 228

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G  D
Sbjct: 1   IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E     +H
Sbjct: 57  RNTEQEEGGEAVH 69

>pdb|3FZZ|A Chain A, Structure Of Grc Length = 227

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 47  IVGGNVTKLHEFPWIA--ALTKKG--KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GGN    H  P++A     K G  K +CG  L+  + VLTAAHC      + + VTLG
Sbjct: 1   IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHC----KGRSMTVTLG 56
Query: 103 EHDRLSKNESVPVI 116
            H+  +K E+  +I
Sbjct: 57  AHNIKAKEETQQII 70

>pdb|3G01|A Chain A, Structure Of Grc Mutant E192rE193G Length = 227

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 47  IVGGNVTKLHEFPWIA--ALTKKG--KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GGN    H  P++A     K G  K +CG  L+  + VLTAAHC      + + VTLG
Sbjct: 1   IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHC----KGRSMTVTLG 56
Query: 103 EHDRLSKNESVPVI 116
            H+  +K E+  +I
Sbjct: 57  AHNIKAKEETQQII 70

>pdb|1KDQ|A Chain A, Crystal Structure Analysis Of The Mutant S189d Rat Chymotrypsin Length = 131

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IV G       +PW  +L  K  F +CG +LI++  V+TAAHC  GV   ++ V  GE D
Sbjct: 1   IVNGEDAIPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHC--GVKTSDV-VVAGEFD 57
Query: 106 RLSKNESVPVI 116
           + S  E++ V+
Sbjct: 58  QGSDEENIQVL 68

>pdb|3NXP|A Chain A, Crystal Structure Of Human Prethrombin-1 Length = 424

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 165 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 224
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 225 LVRIGKHSR 233

>pdb|2F9N|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant K192qD216G IN COMPLEX WITH LEUPEPTIN Length = 245

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEGVNPKE---IKVT 100
           IVGG      ++PW  +L  + +++   CG +LI  + VLTAAHC+ G + K+   ++V 
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCV-GPDVKDLATLRVQ 59
Query: 101 LGEHDRLSKNESVPV 115
           L E     +++ +PV
Sbjct: 60  LREQHLYYQDQLLPV 74

>pdb|2F9O|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant D216g Length = 245

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEGVNPKE---IKVT 100
           IVGG      ++PW  +L  + +++   CG +LI  + VLTAAHC+ G + K+   ++V 
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCV-GPDVKDLATLRVQ 59
Query: 101 LGEHDRLSKNESVPV 115
           L E     +++ +PV
Sbjct: 60  LREQHLYYQDQLLPV 74

>pdb|1LTO|A Chain A, Human Alpha1-Tryptase Length = 245

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEGVNPKE---IKVT 100
           IVGG      ++PW  +L  + +++   CG +LI  + VLTAAHC+ G + K+   ++V 
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCL-GPDVKDLATLRVQ 59
Query: 101 LGEHDRLSKNESVPV 115
           L E     +++ +PV
Sbjct: 60  LREQHLYYQDQLLPV 74

>pdb|3GOV|B Chain B, Crystal Structure Of The Catalytic Region Of Human Masp-1 Length = 251

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 15/81 (18%)
Query: 47  IVGGNVTKLHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCI--------------EG 91
           I  G   +    PWIA L+   G+ +CG +L+    ++TAAHC+              + 
Sbjct: 1   IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDL 60
Query: 92  VNPKEIKVTLGEHDRLSKNES 112
           ++P + K+ LG+H RL  +E+
Sbjct: 61  LSPSDFKIILGKHWRLRSDEN 81

>pdb|1EUF|A Chain A, Bovine Duodenase(New Serine Protease), Crystal Structure Length = 227

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKK--GKFY-CGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG+  K H  P++A L  K  GK + CG  L+ +  VLTAAHC+       I VTLG 
Sbjct: 1   IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLG----SSINVTLGA 56
Query: 104 HDRLSKNESVPVI 116
           H+ + +  +  VI
Sbjct: 57  HNIMERERTQQVI 69

>pdb|2ZGC|A Chain A, Crystal Structure Of Active Human Granzyme M Length = 240

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           I+GG     H  P++A+L + G   CG  L+  + VLTAAHC+      ++++ LG H
Sbjct: 1   IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCL-AQRMAQLRLVLGLH 57

>pdb|2ZGJ|A Chain A, Crystal Structure Of D86n-gzmm Complexed With Its Optimal Synthesized Substrate Length = 240

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           I+GG     H  P++A+L + G   CG  L+  + VLTAAHC+      ++++ LG H
Sbjct: 1   IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCL-AQRMAQLRLVLGLH 57

>pdb|2ANY|A Chain A, Expression, Crystallization And The Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 47 IVGGNVTKLHEFPWIAALTKK---GKFYCGATLIAKRHVLTAAHCIEGVNPKEI 97
          IVGG  +   E+PW  +L  K    +  CG +LI  + VLTAAHC +G+  +++
Sbjct: 1  IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDV 54

>pdb|1MD8|A Chain A, Monomeric Structure Of The Active Catalytic Domain Of Complement Protease C1r Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 33  HCNCACGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHC 88
            C   CG+    VE+ QRI+GG   K+  FPW       G+   G  L+  R +LTAAH 
Sbjct: 72  RCLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIHGR--GGGALLGDRWILTAAHT 129
Query: 89  IEGVNPKE 96
           +    PKE
Sbjct: 130 LY---PKE 134

>pdb|1MD7|A Chain A, Monomeric Structure Of The Zymogen Of Complement Protease C1r Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 33  HCNCACGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHC 88
            C   CG+    VE+ QRI+GG   K+  FPW       G+   G  L+  R +LTAAH 
Sbjct: 72  RCLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIHGR--GGGALLGDRWILTAAHT 129
Query: 89  IEGVNPKE 96
           +    PKE
Sbjct: 130 LY---PKE 134

>pdb|3TGJ|E Chain E, S195a Trypsinogen Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 233

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 41  VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
           V+ + +IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V 
Sbjct: 5   VDDDDKIVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCYK----SRIQVR 59
Query: 101 LGEHD 105
           LGEH+
Sbjct: 60  LGEHN 64

>pdb|2ANW|A Chain A, Expression, Crystallization And Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 47 IVGGNVTKLHEFPWIAALTKK---GKFYCGATLIAKRHVLTAAHCIEGVNPKEI 97
          IVGG  +   E+PW  +L  K    +  CG +LI  + VLTAAHC +G+  +++
Sbjct: 1  IVGGTNSSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDV 54

>pdb|1FAX|A Chain A, Coagulation Factor Xa Inhibitor Complex Length = 254

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G+ +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVGDRN 58

>pdb|1CO7|E Chain E, R117h Mutant Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 245

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 41  VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
           V+ + +IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V 
Sbjct: 17  VDDDDKIVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVR 71
Query: 101 LGEHD 105
           LGEH+
Sbjct: 72  LGEHN 76

>pdb|1PYT|C Chain C, Ternary Complex Of Procarboxypeptidase A, Proproteinase E, And Chymotrypsinogen C Length = 253

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 44  NQRIVGGNVTKLHEFPWIAALT--KKGKFY--CGATLIAKRHVLTAAHCIEGVNPKEIKV 99
           + R+V G     + + W  +L   K G F+  CG +LIA   V+TA HCI     +  +V
Sbjct: 9   SSRVVNGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS--TSRTYQV 66
Query: 100 TLGEHDR--LSKNESV 113
            LGE+DR  L  +E V
Sbjct: 67  VLGEYDRSVLQGSEQV 82

>pdb|2PSX|A Chain A, Crystal Structure Of Human Kallikrein 5 In Complex With Leupeptin Length = 227

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALT-KKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           I+ G+   +H  PW AAL  +  + YCGA L+  + +LTAAHC +    K  +V LG +
Sbjct: 1   IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRK----KVFRVRLGHY 55

>pdb|2JET|B Chain B, Crystal Structure Of A Trypsin-Like Mutant (S189d, A226g) Chymotrypsin Length = 128

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 58  FPWIAALTKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVI 116
           +PW  +L  K  F +CG +LI++  V+TAAHC  GV   ++ V  GE D+ S  E++ V+
Sbjct: 9   WPWQVSLQDKTGFHFCGGSLISEDWVVTAAHC--GVKTSDV-VVAGEFDQGSDEENIQVL 65

>pdb|3ELA|H Chain H, Crystal Structure Of Active Site Inhibited Coagulation Factor Viia Mutant In Complex With Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 105
           IVGG      E PW   L   G   CG TLI    V++AAHC + + N + +   LGEHD
Sbjct: 1   IVGGKDCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHD 60

>pdb|2F91|A Chain A, 1.2a Resolution Structure Of A Crayfish Trypsin Complexed With A Peptide Inhibitor, Sgti Length = 237

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKF------YCGATLIAKRHVLTAAHCIEG---VNPKEI 97
           IVGG    L EFP+   L+ +  F      +CGA++  + + +TA HC+ G    NP  +
Sbjct: 1   IVGGTDATLGEFPY--QLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGL 58
Query: 98  KVTLGEHDRLSKNESVPVIIHFS 120
           ++  GE D +S NE    II  S
Sbjct: 59  QIVAGELD-MSVNEGSEQIITVS 80

>pdb|1AU8|A Chain A, Human Cathepsin G Length = 224

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG  ++ H  P++A L   +  G+  CG  L+ +  VLTAAHC  G N   I VTLG 
Sbjct: 1   IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW-GSN---INVTLGA 56
Query: 104 HD 105
           H+
Sbjct: 57  HN 58

>pdb|1KYN|B Chain B, Cathepsin-G Length = 235

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG  ++ H  P++A L   +  G+  CG  L+ +  VLTAAHC  G N   I VTLG 
Sbjct: 1   IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW-GSN---INVTLGA 56
Query: 104 HD 105
           H+
Sbjct: 57  HN 58

>pdb|3TJU|A Chain A, Crystal Structure Of Human Granzyme H With An Inhibitor Length = 226

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 47  IVGGNVTKLHEFPWIAA---LTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG+  K H  P++A    L +K +  CG  L+ K  VLTAAHC +G +   I VTLG 
Sbjct: 1   IIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVLTAAHC-QGSS---INVTLGA 56
Query: 104 HD 105
           H+
Sbjct: 57  HN 58

>pdb|4GAW|A Chain A, Crystal Structure Of Active Human Granzyme H Length = 226

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 47  IVGGNVTKLHEFPWIAA---LTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG+  K H  P++A    L +K +  CG  L+ K  VLTAAHC +G +   I VTLG 
Sbjct: 1   IIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVLTAAHC-QGSS---INVTLGA 56
Query: 104 HD 105
           H+
Sbjct: 57  HN 58

>pdb|1ZJD|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Kunitz Protease Inhibitor Domain Of Protease Nexin Ii Length = 237

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|1MH0|A Chain A, Crystal Structure Of The Anticoagulant Slow Form Of Thrombin Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 30  RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 89
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 90  LVRIGKHSR 98

>pdb|2BDY|A Chain A, Thrombin In Complex With Inhibitor Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 30  RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 89
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 90  LVRIGKHSR 98

>pdb|1ZLR|A Chain A, Factor Xi Catalytic Domain Complexed With 2-Guanidino-1-(4-(4,4,5,5- Tetramethyl-1,3,2-Dioxaborolan-2-Yl)phenyl)ethyl Nicotinate Length = 237

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|1XX9|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Ecotinm84r Length = 238

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|1ZPZ|A Chain A, Factor Xi Catalytic Domain Complexed With N-((R)-1-(4- Bromophenyl)ethyl)urea-Asn-Val-Arg-Alpha-Ketothiazole Length = 238

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|1ZHM|A Chain A, Crystal Structure Of The Catalytic Domain Of The Coagulation Factor Xia In Complex With Benzamidine (s434a- T475a-k437 Mutant) Length = 238

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|1ZHP|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-K505 Mutant) Length = 238

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|1D9I|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 30  RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 89
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 90  LVRIGKHSR 98

>pdb|3SOR|A Chain A, Factor Xia In Complex With A Clorophenyl-tetrazole Inhibitor Length = 238

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|3BG8|A Chain A, Crystal Structure Of Factor Xia In Complex With Clavatadine A Length = 238

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|1KLT|A Chain A, Crystal Structure Of Pmsf-Treated Human Chymase At 1.9 Angstroms Resolution Length = 226

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG  +K H  P++A L   T  G   +CG  LI +  VLTAAHC      + I VTLG
Sbjct: 1   IIGGTESKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 56
Query: 103 EHD 105
            H+
Sbjct: 57  AHN 59

>pdb|1EOJ|A Chain A, Design Of P1' And P3' Residues Of Trivalent Thrombin Inhibitors And Their Crystal Structures Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 44  NQRIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPK 95
           + RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     
Sbjct: 30  DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEN 89
Query: 96  EIKVTLGEHDR 106
           ++ V +G+H R
Sbjct: 90  DLLVRIGKHSR 100

>pdb|1ZHR|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-C482s-K437a Mutant) Length = 238

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|1JWT|A Chain A, Crystal Structure Of Thrombin In Complex With A Novel Bicyclic Lactam Inhibitor Length = 305

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 44  NQRIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPK 95
           + RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     
Sbjct: 34  DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEN 93
Query: 96  EIKVTLGEHDR 106
           ++ V +G+H R
Sbjct: 94  DLLVRIGKHSR 104

>pdb|3SQE|E Chain E, Crystal Structure Of Prethrombin-2 Mutant S195a In The Alternative Form Length = 290

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 31  RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 90
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 91  LVRIGKHSR 99

>pdb|1ELV|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Complement C1s Protease Length = 333

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 27  INSSMNHCNCACG----QVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHV 82
           +   +  C   CG      E  QRI+GG+   +  FPW          + G  LI +  V
Sbjct: 59  LGPELPKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDNP---WAGGALINEYWV 115
Query: 83  LTAAHCIEG 91
           LTAAH +EG
Sbjct: 116 LTAAHVVEG 124

>pdb|1MCT|A Chain A, The Refined 1.6 Angstroms Resolution Crystal Structure Of The Complex Formed Between Porcine Beta-trypsin And Mcti-a, A Trypsin Inhibitor Of Squash Family Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH-- 104
           IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH  
Sbjct: 1   IVGGYTCAANSIPYQVSL-NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLGEHNI 55
Query: 105 DRLSKNE 111
           D L  NE
Sbjct: 56  DVLEGNE 62

>pdb|1D6W|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electrophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 30  RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 89
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 90  LVRIGKHSR 98

>pdb|1XXD|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Mutated Ecotin Length = 238

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L   +   +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

>pdb|1NM6|A Chain A, Thrombin In Complex With Selective Macrocyclic Inhibitor At 1.8a Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 29  RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 88
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 89  LVRIGKHSR 97

>pdb|1NU9|A Chain A, Staphylocoagulase-prethrombin-2 Complex Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 32  RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 91
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 92  LVRIGKHSR 100

>pdb|1DM4|B Chain B, Ser195ala Mutant Of Human Thrombin Complexed With Fibrinopeptide A (7- 16) Length = 260

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 1   RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 60
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 61  LVRIGKHSR 69

>pdb|1HAG|E Chain E, The Isomorphous Structures Of Prethrombin2, Hirugen-And Ppack- Thrombin: Changes Accompanying Activation And Exosite Binding To Thrombin Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 44  NQRIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPK 95
           + RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     
Sbjct: 34  DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEN 93
Query: 96  EIKVTLGEHDR 106
           ++ V +G+H R
Sbjct: 94  DLLVRIGKHSR 104

>pdb|3K65|B Chain B, Crystal Structure Of Prethombin-2FRAGMENT-2 Complex Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 49  RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDL 108
Query: 98  KVTLGEHDR 106
            V +G+H R
Sbjct: 109 LVRIGKHSR 117

>pdb|1TFX|A Chain A, Complex Of The Second Kunitz Domain Of Tissue Factor Pathway Inhibitor With Porcine Trypsin Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH-- 104
           IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH  
Sbjct: 1   IVGGYTCAANSIPYQVSL-NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLGEHNI 55
Query: 105 DRLSKNE 111
           D L  NE
Sbjct: 56  DVLEGNE 62

>pdb|1AN1|E Chain E, Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH-- 104
           IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH  
Sbjct: 1   IVGGYTCAANSIPYQVSL-NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLGEHNI 55
Query: 105 DRLSKNE 111
           D L  NE
Sbjct: 56  DVLEGNE 62

>pdb|1SC8|U Chain U, Urokinase Plasminogen Activator B-Chain-J435 Complex Length = 262

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 38  CGQVERNQR--IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIE 90
           CGQ     R  I+GG  T +   PW AA+ ++ +     + CG +LI+   V++A HC  
Sbjct: 5   CGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFI 64
Query: 91  GVNPKEIKVTLGEHDRLSKN 110
               KE  +      RL+ N
Sbjct: 65  DYPKKEDYIVYLGRSRLNSN 84

>pdb|1MTN|B Chain B, Bovine Alpha-Chymotrypsin:bpti Crystallization Length = 131

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IV G       +PW  +L  K  F +CG +LI +  V+TAAHC  GV   ++ V  GE D
Sbjct: 1   IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHC--GVTTSDV-VVAGEFD 57
Query: 106 RLSKNESV 113
           + S +E +
Sbjct: 58  QGSSSEKI 65

>pdb|1OP0|A Chain A, Crystal Structure Of Aav-sp-i, A Glycosylated Snake Venom Serine Proteinase From Agkistrodon Acutus Length = 234

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           ++GGN   ++E  ++ A      F+CG TLI    V+TAAHC    +  + ++ LG H +
Sbjct: 1   VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHC----DSTDFQMQLGVHSK 56
Query: 107 LSKNES 112
              NE 
Sbjct: 57  KVLNED 62

>pdb|2XRC|A Chain A, Human Complement Factor I Length = 565

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 43  RNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG 91
           R +RIVGG   +L + PW  A+       CG   I    +LTAAHC+  
Sbjct: 318 RRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRA 366

>pdb|1AKS|A Chain A, Crystal Structure Of The First Active Autolysate Form Of The Porcine Alpha Trypsin Length = 125

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH-- 104
           IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH  
Sbjct: 1   IVGGYTCAANSIPYQVSL-NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLGEHNI 55
Query: 105 DRLSKNE 111
           D L  NE
Sbjct: 56  DVLEGNE 62

>pdb|3MYW|A Chain A, The Bowman-Birk Type Inhibitor From Mung Bean In Ternary Complex With Porcine Trypsin Length = 223

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH-- 104
           IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH  
Sbjct: 1   IVGGYTCAANSVPYQVSL-NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLGEHNI 55
Query: 105 DRLSKNE 111
           D L  NE
Sbjct: 56  DVLEGNE 62

>pdb|1F7Z|A Chain A, Rat Trypsinogen K15a Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 233

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 41  VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
           V+ +  IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V 
Sbjct: 5   VDDDDAIVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVR 59
Query: 101 LGEHD 105
           LGEH+
Sbjct: 60  LGEHN 64

>pdb|1DLK|B Chain B, Crystal Structure Analysis Of Delta-Chymotrypsin Bound To A Peptidyl Chloromethyl Ketone Inhibitor Length = 230

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IV G       +PW  +L  K  F +CG +LI +  V+TAAHC  GV   ++ V  GE D
Sbjct: 1   IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHC--GVTTSDV-VVAGEFD 57
Query: 106 RLSKNESV 113
           + S +E +
Sbjct: 58  QGSSSEKI 65

>pdb|1BDA|A Chain A, Catalytic Domain Of Human Single Chain Tissue Plasminogen Activator In Complex With Dansyl-Egr-Cmk (Dansyl-Glu-Gly-Arg Chloromethyl Ketone) Length = 265

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 36  CACGQVERNQ-RIVGGNVTKLHEFPWIAALTKK------GKFYCGATLIAKRHVLTAAHC 88
           C   Q  + Q RI GG    +   PW AA+  K       +F CG  LI+   +L+AAHC
Sbjct: 2   CGLRQYSQPQFRIKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHC 61
Query: 89  I-EGVNPKEIKVTLGEHDRLSKNE 111
             E   P  + V LG   R+   E
Sbjct: 62  FQERFPPHHLTVILGRTYRVVPGE 85

>pdb|2ZCH|P Chain P, Crystal Structure Of Human Prostate Specific Antigen Complexed With An Activating Antibody Length = 237

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H  PW   +  +G+  CG  L+  + VLTAAHCI      +  + LG H  
Sbjct: 1   IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIR----NKSVILLGRHSL 56
Query: 107 LSKNESVPVIIHFSVSNT 124
               ++  V   F VS++
Sbjct: 57  FHPEDTGQV---FQVSHS 71

>pdb|4E7N|A Chain A, Crystal Structure Of Ahv_tl-I, A Glycosylated Snake-Venom Thrombin- Like Enzyme From Agkistrodon Halys Length = 238

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 47  IVGGNVTKLHEFPWIAAL--TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           I+GG+   ++E  ++ AL  ++    +CG TLI +  VLTAAHC    + K  ++ LG H
Sbjct: 1   IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHC----DRKNFRIKLGMH 56
Query: 105 DRLSKNE 111
            +   NE
Sbjct: 57  SKKVPNE 63

>pdb|4GSO|A Chain A, Structure Of Jararacussin-I Length = 232

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           ++GG+   ++E P++A L   G ++CG TLI +  V+TAAHC    +    ++ LG H +
Sbjct: 1   VLGGDECDINEHPFLAFLYSHG-YFCGLTLINQEWVVTAAHC----DSTNFQMQLGVHSK 55
Query: 107 LSKNE 111
              NE
Sbjct: 56  KVLNE 60

>pdb|1FI8|A Chain A, Rat Granzyme B [n66q] Complexed To Ecotin [81-84 Iepd] Length = 228

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 47  IVGGNVTKLHEFPWIAALT----KKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG+  K H  P++A L       G   CG  LI +  VLTAAHC    +  +I+VTLG
Sbjct: 1   IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC----SGSKIQVTLG 56
Query: 103 EHDRLSKNESVPVII 117
            H+ + + E +  II
Sbjct: 57  AHN-IKEQEKMQQII 70

>pdb|1OP8|A Chain A, Crystal Structure Of Human Granzyme A Length = 234

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           I+GGN    H  P++  L+   K  C   LIAK  VLTAAHC   +N K  +V LG H
Sbjct: 1   IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHC--NLN-KRSQVILGAH 55

>pdb|1ORF|A Chain A, The Oligomeric Structure Of Human Granzyme A Reveals The Molecular Determinants Of Substrate Specificity Length = 234

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           I+GGN    H  P++  L+   K  C   LIAK  VLTAAHC   +N K  +V LG H
Sbjct: 1   IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHC--NLN-KRSQVILGAH 55

>pdb|1H4W|A Chain A, Structure Of Human Trypsin Iv (Brain Trypsin) Length = 224

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI+++ V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCEENSLPYQVSLNS-GSHFCGGSLISEQWVVSAAHCYK----TRIQVRLGEHN 54

>pdb|2BDG|A Chain A, Human Kallikrein 4 Complex With Nickel And P-aminobenzamidine Length = 223

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+ G     H  PW AAL  + + +C   L+  + VL+AAHC +        + LG H  
Sbjct: 1   IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQ----NSYTIGLGLHSL 56
Query: 107 LSKNESVPVIIHFSVS 122
            +  E    ++  S+S
Sbjct: 57  EADQEPGSQMVEASLS 72

>pdb|2R9P|A Chain A, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin Inhibitor(Bpti) Length = 224

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI+++ V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCEENSLPYQVSLNS-GSHFCGGSLISEQWVVSAAHCYK----TRIQVRLGEHN 54

>pdb|1GPZ|A Chain A, The Crystal Structure Of The Zymogen Catalytic Domain Of Complement Protease C1r Length = 399

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 34  CNCACGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCI 89
           C   CG+    VE+ Q+I+GG   K+  FPW       G+   G  L+  R +LTAAH +
Sbjct: 141 CLPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIHGR--GGGALLGDRWILTAAHTL 198
Query: 90  EGVNPKE 96
               PKE
Sbjct: 199 Y---PKE 202

>pdb|1A0J|A Chain A, Crystal Structure Of A Non-Psychrophilic Trypsin From A Cold-Adapted Fish Species. Length = 223

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + +   + A+L + G  +CG +LI+   V++AAHC +      I+V LGEH+ 
Sbjct: 1   IVGGYECRKNSASYQASL-QSGYHFCGGSLISSTWVVSAAHCYK----SRIQVRLGEHN- 54
Query: 107 LSKNE-------SVPVIIHFS 120
           ++ NE       SV VI+H S
Sbjct: 55  IAVNEGTEQFIDSVKVIMHPS 75

>pdb|1OP2|A Chain A, Crystal Structure Of Aav-Sp-Ii, A Glycosylated Snake Venom Serine Proteinase From Agkistrodon Acutus Length = 234

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           ++GGN   ++E  ++ A      F+CG TLI    V+TAAHC    +    ++ LG H +
Sbjct: 1   VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHC----DSTNFQMQLGVHSK 56
Query: 107 LSKNES 112
              NE 
Sbjct: 57  KVLNED 62

>pdb|2HNT|C Chain C, Crystallographic Structure Of Human Gamma-Thrombin Length = 70

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1MKW|K Chain K, The Co-Crystal Structure Of Unliganded Bovine Alpha- Thrombin And Prethrombin-2: Movement Of The Yppw Segment And Active Site Residues Upon Ligand Binding Length = 308

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 46  RIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEI 97
           RIV G   ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++
Sbjct: 49  RIVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDL 108
Query: 98  KVTLGEHDRLSKNESVPVI 116
            V +G+H R      V  I
Sbjct: 109 LVRIGKHSRTRYERKVEKI 127

>pdb|3S9A|A Chain A, Russell's Viper Venom Serine Proteinase, Rvv-V (Closed-Form) Length = 234

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 47  IVGGNVTKLHEFPWIAAL--TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           +VGG+   ++E P++ AL  +     +C   LI +  VLTAAHC    + + I++ LG H
Sbjct: 1   VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHC----DRRNIRIKLGMH 56
Query: 105 DRLSKNE 111
            +  +NE
Sbjct: 57  SKNIRNE 63

>pdb|1NN6|A Chain A, Human Pro-Chymase Length = 228

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG   K H  P++A L   T  G   +CG  LI +  VLTAAHC      + I VTLG
Sbjct: 3   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 58
Query: 103 EHD 105
            H+
Sbjct: 59  AHN 61

>pdb|4AFQ|A Chain A, Human Chymase - Fynomer Complex Length = 226

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG   K H  P++A L   T  G   +CG  LI +  VLTAAHC      + I VTLG
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 56
Query: 103 EHD 105
            H+
Sbjct: 57  AHN 59

>pdb|2VNT|A Chain A, Urokinase-Type Plasminogen Activator Inhibitor Complex With A 1-(7-Sulphoamidoisoquinolinyl)guanidine Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 38  CGQVERNQR--IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIE 90
           CGQ     R  I+GG  T +   PW AA+ ++ +     + CG +L++   V++A HC  
Sbjct: 13  CGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFI 72
Query: 91  GVNPKEIKVTLGEHDRLSKN 110
               KE  +      RL+ N
Sbjct: 73  DYPKKEDYIVYLGRSRLNSN 92

>pdb|3N7O|A Chain A, X-Ray Structure Of Human Chymase In Complex With Small Molecule Inhibitor Length = 226

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG   K H  P++A L   T  G   +CG  LI +  VLTAAHC      + I VTLG
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 56
Query: 103 EHD 105
            H+
Sbjct: 57  AHN 59

>pdb|2KAI|A Chain A, Refined 2.5 Angstroms X-Ray Crystal Structure Of The Complex Formed By Porcine Kallikrein A And The Bovine Pancreatic Trypsin Inhibitor. Crystallization, Patterson Search, Structure Determination, Refinement, Structure And Comparison With Its Components And With The Bovine Trypsin- Pancreatic Trypsin Inhibitor Complex Length = 80

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + +  PW  A+     F CG  L+  + VLTAAHC         +V LG H+ 
Sbjct: 1   IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKN----DNYEVWLGRHN- 55
Query: 107 LSKNESV 113
           L +NE+ 
Sbjct: 56  LFENENT 62

>pdb|1PJP|A Chain A, The 2.2 A Crystal Structure Of Human Chymase In Complex With Succinyl- Ala-Ala-Pro-Phe-Chloromethylketone Length = 226

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKF-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG   K H  P++A L   T  G   +CG  LI +  VLTAAHC      + I VTLG
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLG 56
Query: 103 EHD 105
            H+
Sbjct: 57  AHN 59

>pdb|1VZQ|H Chain H, Complex Of Thrombin With Designed Inhibitor 7165 Length = 250

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDRLSKNESVPVI 116
           V +G+H R +   ++  I
Sbjct: 61  VRIGKHSRTAYERNIEKI 78

>pdb|4DG4|A Chain A, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 224

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI+++ V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCEENSLPYQVSLNS-GYHFCGGSLISEQWVVSAAHCYK----TRIQVRLGEHN 54

>pdb|1BHX|B Chain B, X-Ray Structure Of The Complex Of Human Alpha Thrombin With The Inhibitor Sdz 229-357 Length = 147

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|2A31|A Chain A, Trypsin In Complex With Borate Length = 223

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 48  VGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH--D 105
           VGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH  D
Sbjct: 2   VGGYTCAANSIPYQVSL-NSGSHFCGGSLINSQWVVSAAHCYK----SRIQVRLGEHNID 56
Query: 106 RLSKNE 111
            L  NE
Sbjct: 57  VLEGNE 62

>pdb|1H8D|H Chain H, X-Ray Structure Of The Human Alpha-Thrombin Complex With A Tripeptide Phosphonate Inhibitor Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|3R3G|B Chain B, Structure Of Human Thrombin With Residues 145-150 Of Murine Thrombin Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|4F4O|C Chain C, Structure Of The Haptoglobin-Haemoglobin Complex Length = 347

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 31  MNHCNCACGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAA 86
           +  C   CG+    V++ QRI+GG++     FPW A +        GATLI ++ +LT A
Sbjct: 83  LPECEAVCGKPKNPVDQVQRIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTA 142

>pdb|2OD3|B Chain B, Human Thrombin Chimera With Human Residues 184a, 186, 186a, 186b, 186c And 222 Replaced By Murine Thrombin Equivalents Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1TQ0|B Chain B, Crystal Structure Of The Potent Anticoagulant Thrombin Mutant W215aE217A IN FREE FORM Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1QUR|H Chain H, Human Alpha-Thrombin In Complex With Bivalent, Benzamidine-Based Synthetic Inhibitor Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|3GIC|B Chain B, Structure Of Thrombin Mutant Delta(146-149e) In The Free Form Length = 250

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1B7X|B Chain B, Structure Of Human Alpha-Thrombin Y225i Mutant Bound To D- Phe-Pro-Arg-Chloromethylketone Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|2A0Q|B Chain B, Structure Of Thrombin In 400 Mm Potassium Chloride Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|2BVR|H Chain H, Human Thrombin Complexed With Fragment-based Small Molecules Occupying The S1 Pocket Length = 252

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|2THF|B Chain B, Structure Of Human Alpha-thrombin Y225f Mutant Bound To D-phe-pro-arg- Chloromethylketone Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1BTH|H Chain H, Structure Of Thrombin Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1Z8I|B Chain B, Crystal Structure Of The Thrombin Mutant G193a Bound To Ppack Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1ABI|H Chain H, Structure Of The Hirulog 3-Thrombin Complex And Nature Of The S' Subsites Of Substrates And Inhibitors Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1WBG|B Chain B, Active Site Thrombin Inhibitors Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1H8I|H Chain H, X-Ray Crystal Structure Of Human Alpha-Thrombin With A Tripeptide Phosphonate Inhibitor Length = 253

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1GJ5|H Chain H, Selectivity At S1, H2o Displacement, Upa, Tpa, Ser190ALA190 PROTEASE, Structure-Based Drug Design Length = 258

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|3EE0|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF HUMAN Thrombin (Space Group P2(1)2(1)2(1)) Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1Z8J|B Chain B, Crystal Structure Of The Thrombin Mutant G193p Bound To Ppack Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1SFQ|B Chain B, Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|2GP9|B Chain B, Crystal Structure Of The Slow Form Of Thrombin In A Self- Inhibited Conformation Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1JOU|B Chain B, Crystal Structure Of Native S195a Thrombin With An Unoccupied Active Site Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1RD3|B Chain B, 2.5a Structure Of Anticoagulant Thrombin Variant E217k Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1THP|B Chain B, Structure Of Human Alpha-Thrombin Y225p Mutant Bound To D-Phe-Pro-Arg- Chloromethylketone Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|2PGB|B Chain B, Inhibitor-Free Human Thrombin Mutant C191a-C220a Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1TWX|B Chain B, Crystal Structure Of The Thrombin Mutant D221aD222K Length = 259

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|3JZ1|B Chain B, Crystal Structure Of Human Thrombin Mutant N143p In E:na+ Form Length = 259

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1J15|A Chain A, Benzamidine In Complex With Rat Trypsin Mutant X99175190RT Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|3MWI|U Chain U, The Complex Crystal Structure Of Urokianse And 5-Nitro-1h-Indole-2- Amidine Length = 246

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +LI+   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|3IG6|B Chain B, Low Molecular Weigth Human Urokinase Type Plasminogen Activator 2-[6- (3'-Aminomethyl-Biphenyl-3-Yloxy)-4-(3-Dimethylamino- Pyrrolidin-1- Yl)-3, 5-Difluoro-Pyridin-2-Yloxy]-4-Dimethylamino-Benzoic Acid Complex Length = 253

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +LI+   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1W0Z|U Chain U, Urokinase Type Plasminogen Activator Length = 247

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +LI+   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1TRM|A Chain A, The Three-Dimensional Structure Of Asn102 Mutant Of Trypsin. Role Of Asp102 In Serine Protease Catalysis Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1EJN|A Chain A, Urokinase Plasminogen Activator B-Chain Inhibitor Complex Length = 253

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +LI+   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1QL9|A Chain A, Factor Xa Specific Inhibitor In Complex With Rat Trypsin Mutant X99rt Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|2NWN|A Chain A, New Pharmacophore For Serine Protease Inhibition Revealed By Crystal Structure Of Human Urokinase-Type Plasminogen Activator Complexed With A Cyclic Peptidyl Inhibitor, Upain-1 Length = 253

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +LI+   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|4FU7|A Chain A, Crystal Structure Of The Urokinase Length = 246

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +LI+   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|2O8U|A Chain A, Crystal Structure And Binding Epitopes Of Urokinase-Type Plasminogen Activator (C122aN145QS195A) IN COMPLEX WITH Inhibitors Length = 253

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +LI+   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1DPO|A Chain A, Structure Of Rat Trypsin Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1AMH|A Chain A, Uncomplexed Rat Trypsin Mutant With Asp 189 Replaced With Ser (D189s) Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1EZS|C Chain C, Crystal Structure Of Ecotin Mutant M84r, W67a, G68a, Y69a, D70a Bound To Rat Anionic Trypsin Ii Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|3TGI|E Chain E, Wild-Type Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1BRB|E Chain E, Crystal Structures Of Rat Anionic Trypsin Complexed With The Protein Inhibitors Appi And Bpti Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1AND|A Chain A, Anionic Trypsin Mutant With Arg 96 Replaced By His Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1VR1|H Chain H, Specifity For Plasminogen Activator Inhibitor-1 Length = 261

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 12/72 (16%)
Query: 47  IVGGNVTKLHEFPWIAALTKK------GKFYCGATLIAKRHVLTAAHCI------EGVNP 94
           IV G+  ++   PW   L  K       +F CGA+LI+ R VLTAAHC+      +    
Sbjct: 1   IVEGSDAEIGMSPWQVMLFAKHRRSPGERFLCGASLISDRWVLTAAHCLLYPPWDKNFTE 60
Query: 95  KEIKVTLGEHDR 106
            ++ V +G+H R
Sbjct: 61  NDLLVRIGKHSR 72

>pdb|1ANB|A Chain A, Anionic Trypsin Mutant With Ser 214 Replaced By Glu Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1K9O|E Chain E, Crystal Structure Of Michaelis Serpin-Trypsin Complex Length = 223

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1ANC|A Chain A, Anionic Trypsin Mutant With Ser 214 Replaced By Lys Length = 223

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSLNS-GYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1SLW|B Chain B, Rat Anionic N143h, E151h Trypsin Complexed To A86h Ecotin; Nickel- Bound Length = 223

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|1SLX|B Chain B, Rat Anionic N143h, E151h Trypsin Complexed To A86h Ecotin; Zinc-Bound Length = 223

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC +      I+V LGEH+
Sbjct: 1   IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYK----SRIQVRLGEHN 54

>pdb|3EDX|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF MURINE THROMBIN Length = 258

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 59  PWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIKVTLGEHDRLSKN 110
           PW   L +K   +  CGA+LI+ R VLTAAHCI      +     ++ V +G+H R    
Sbjct: 13  PWQVMLFRKSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTENDLLVRIGKHSRTRYE 72
Query: 111 ESV 113
            +V
Sbjct: 73  RNV 75

>pdb|2OCV|B Chain B, Structural Basis Of Na+ Activation Mimicry In Murine Thrombin Length = 259

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 59  PWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIKVTLGEHDRLSKN 110
           PW   L +K   +  CGA+LI+ R VLTAAHCI      +     ++ V +G+H R    
Sbjct: 13  PWQVMLFRKSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTENDLLVRIGKHSRTRYE 72
Query: 111 ESVPVI 116
            +V  I
Sbjct: 73  RNVEKI 78

>pdb|3BN9|B Chain B, Crystal Structure Of Mt-Sp1 In Complex With Fab Inhibitor E2 Length = 241

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY-CGATLIAKRHVLTAAHC------IEGVNPKEIKV 99
           +VGG      E+PW  +L   G+ + CGA+LI+   +++AAHC          +P +   
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 100 TLGEHDRLSKN 110
            LG HD+  ++
Sbjct: 61  FLGLHDQSQRS 71

>pdb|3P8G|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Benzamidine Length = 241

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY-CGATLIAKRHVLTAAHC------IEGVNPKEIKV 99
           +VGG      E+PW  +L   G+ + CGA+LI+   +++AAHC          +P +   
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 100 TLGEHDRLSKN 110
            LG HD+  ++
Sbjct: 61  FLGLHDQSQRS 71

>pdb|1EAW|A Chain A, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (Aprotinin) Complex Length = 241

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY-CGATLIAKRHVLTAAHC------IEGVNPKEIKV 99
           +VGG      E+PW  +L   G+ + CGA+LI+   +++AAHC          +P +   
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 100 TLGEHDRLSKN 110
            LG HD+  ++
Sbjct: 61  FLGLHDQSQRS 71

>pdb|2PUX|B Chain B, Crystal Structure Of Murine Thrombin In Complex With The Extracellular Fragment Of Murine Par3 Length = 258

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 59  PWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIKVTLGEHDRLSKN 110
           PW   L +K   +  CGA+LI+ R VLTAAHCI      +     ++ V +G+H R    
Sbjct: 13  PWQVMLFRKSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTENDLLVRIGKHSRTRYE 72
Query: 111 ESVPVI 116
            +V  I
Sbjct: 73  RNVEKI 78

>pdb|2WUB|A Chain A, Crystal Structure Of Hgfa In Complex With The Allosteric Non-Inhibitory Antibody Fab40.Deltatrp Length = 257

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKE-IKVTLGEH 104
           I+GG+ +     PW+AA+   G  +C  +L+    V++AAHC     P++ + V LG+H
Sbjct: 1   IIGGSSSLPGSHPWLAAIYI-GDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQH 58

>pdb|2R0L|A Chain A, Short Form Hgfa With Inhibitory Fab75 Length = 248

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKE-IKVTLGEH 104
           I+GG+ +     PW+AA+   G  +C  +L+    V++AAHC     P++ + V LG+H
Sbjct: 1   IIGGSSSLPGSHPWLAAIYI-GDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQH 58

>pdb|1TGS|Z Chain Z, Three-Dimensional Structure Of The Complex Between Pancreatic Secretory Inhibitor (Kazal Type) And Trypsinogen At 1.8 Angstroms Resolution. Structure Solution, Crystallographic Refinement And Preliminary Structural Interpretation Length = 229

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 41  VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
           V+ + +IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V 
Sbjct: 1   VDDDDKIVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYK----SGIQVR 55
Query: 101 LGEHD 105
           LGE +
Sbjct: 56  LGEDN 60

>pdb|1FQ3|A Chain A, Crystal Structure Of Human Granzyme B Length = 227

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 47  IVGGNVTKLHEFPWIAALT---KKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG+  K H  P++A L    +K    CG  LI    VLTAAHC        I VTLG 
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQDDFVLTAAHCWGS----SINVTLGA 56
Query: 104 HD 105
           H+
Sbjct: 57  HN 58

>pdb|1ZZZ|A Chain A, Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes Length = 237

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 41  VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
           V+ + +IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V 
Sbjct: 9   VDDDDKIVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYK----SGIQVR 63
Query: 101 LGEHD 105
           LGE +
Sbjct: 64  LGEDN 68

>pdb|3I78|A Chain A, 3599170186220-Loops Of Fxa In Sgt Length = 229

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEH 104
           +VGG      EFP++  L  ++ + +CG  L A+  VLTAAHC+ G  N   I  T G  
Sbjct: 1   VVGGTRAAQGEFPFMVRLINEENEGFCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVV 60
Query: 105 DRLSKN 110
           D  S +
Sbjct: 61  DLQSSS 66

>pdb|1OWD|A Chain A, Substituted 2-naphthamidine Inhibitors Of Urokinase Length = 245

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +L++   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|3I77|A Chain A, 3599170-Loops Of Fxa In Sgt Length = 230

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEH 104
           +VGG      EFP++  L  ++ + +CG  L A+  VLTAAHC+ G  N   I  T G  
Sbjct: 1   VVGGTRAAQGEFPFMVRLINEENEGFCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVV 60
Query: 105 DRLSKN 110
           D  S +
Sbjct: 61  DLQSSS 66

>pdb|1OWE|A Chain A, Substituted 2-Naphthamidine Inhibitors Of Urokinase Length = 245

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +L++   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1GI8|B Chain B, A Novel Serine Protease Inhibition Motif Involving A Multi- Centered Short Hydrogen Bonding Network At The Active Site Length = 245

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +L++   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1F0T|A Chain A, Bovine Trypsin Complexed With Rpr131247 Length = 243

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 41  VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
           V+ + +IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V 
Sbjct: 15  VDDDDKIVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYK----SGIQVR 69
Query: 101 LGEHD 105
           LGE +
Sbjct: 70  LGEDN 74

>pdb|1BBR|H Chain H, The Structure Of Residues 7-16 Of The A Alpha Chain Of Human Fibrinogen Bound To Bovine Thrombin At 2.3 Angstroms Resolution Length = 150

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G   ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLL 60
Query: 99  VTLGEHDRLSKNESVPVI 116
           V +G+H R      V  I
Sbjct: 61  VRIGKHSRTRYERKVEKI 78

>pdb|1FON|A Chain A, Crystal Structure Of Bovine Procarboxypeptidase A-S6 Subunit Iii, A Highly Structured Truncated Zymogen E Length = 240

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 56  HEFPWIAALT--KKGKFY--CGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR--LSK 109
           + + W  +L   K G F+  CG +LIA   V+TA HCI     +  +V LGE+DR  L  
Sbjct: 8   YSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS--TSRTYQVVLGEYDRSVLEG 65
Query: 110 NESV 113
           +E V
Sbjct: 66  SEQV 69

>pdb|1FV9|A Chain A, Crystal Structure Of Human Microurokinase In Complex With 2- Amino-5-Hydroxy-Benzimidazole Length = 245

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +L++   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1IAU|A Chain A, Human Granzyme B In Complex With Ac-Iepd-Cho Length = 227

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 47  IVGGNVTKLHEFPWIAALT---KKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG+  K H  P++A L    +K    CG  LI    VLTAAHC        I VTLG 
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCWGS----SINVTLGA 56
Query: 104 HD 105
           H+
Sbjct: 57  HN 58

>pdb|1BBR|K Chain K, The Structure Of Residues 7-16 Of The A Alpha Chain Of Human Fibrinogen Bound To Bovine Thrombin At 2.3 Angstroms Resolution Length = 259

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G   ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLL 60
Query: 99  VTLGEHDRLSKNESVPVI 116
           V +G+H R      V  I
Sbjct: 61  VRIGKHSRTRYERKVEKI 78

>pdb|1LMW|B Chain B, Lmw U-Pa Structure Complexed With Egrcmk (Glu-Gly-Arg Chloromethyl Ketone) Length = 253

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +L++   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1OPH|B Chain B, Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh And S195a Trypsin Length = 243

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 41  VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
           V+ + +IVGG     +  P+  +L   G  +CG +LI  + V++AAHC +      I+V 
Sbjct: 15  VDDDDKIVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYK----SGIQVR 69
Query: 101 LGEHD 105
           LGE +
Sbjct: 70  LGEDN 74

>pdb|1DX5|M Chain M, Crystal Structure Of The Thrombin-Thrombomodulin Complex Length = 259

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFIENDLL 60
Query: 99  VTLGEHDR 106
           V +G+H R
Sbjct: 61  VRIGKHSR 68

>pdb|1ID5|H Chain H, Crystal Structure Of Bovine Thrombin Complex With Protease Inhibitor Ecotin Length = 256

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCI------EGVNPKEIK 98
           IV G   ++   PW   L +K   +  CGA+LI+ R VLTAAHC+      +     ++ 
Sbjct: 1   IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLL 60
Query: 99  VTLGEHDRLSKNESVPVI 116
           V +G+H R      V  I
Sbjct: 61  VRIGKHSRTRYERKVEKI 78

>pdb|1GJ7|B Chain B, Engineering Inhibitors Highly Selective For The S1 Sites Of Ser190 Trypsin-Like Serine Protease Drug Targets Length = 253

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +L++   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1O5A|B Chain B, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (Ala190 Upa) Length = 253

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL 101
           I+GG  T +   PW AA+ ++ +     + CG +L++   V++A HC      KE  +  
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVY 60
Query: 102 GEHDRLSKN 110
               RL+ N
Sbjct: 61  LGRSRLNSN 69

>pdb|1SGF|G Chain G, Crystal Structure Of 7s Ngf: A Complex Of Nerve Growth Factor With Four Binding Proteins (serine Proteinases) Length = 237

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + +  PW  A+ +  ++ CG  L+    VLTAAHC +       KV LG+++ 
Sbjct: 1   IVGGFKCEKNSQPWHVAVYRYTQYLCGGVLLDPNWVLTAAHCYD----DNYKVWLGKNNL 56
Query: 107 LSKNESV 113
                S 
Sbjct: 57  FKDEPSA 63

>pdb|1KIG|H Chain H, Bovine Factor Xa Length = 241

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 47  IVGGNVTKLHEFPWIAALT-KKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG      E PW A L  ++ + +CG T++ + +VLTAAHC+     K   V +G  D
Sbjct: 1   IVGGRDCAEGECPWQALLVNEENEGFCGGTILNEFYVLTAAHCLH--QAKRFTVRVG--D 56
Query: 106 RLSKNESVPVIIH 118
           R ++ E    + H
Sbjct: 57  RNTEQEEGNEMAH 69

>pdb|1RTF|B Chain B, Complex Of Benzamidine With The Catalytic Domain Of Human Two Chain Tissue Plasminogen Activator [(Tc)-T-Pa] Length = 252

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 47  IVGGNVTKLHEFPWIAALTKK------GKFYCGATLIAKRHVLTAAHCI-EGVNPKEIKV 99
           I GG    +   PW AA+  K       +F CG  LI+   +L+AAHC  E   P  + V
Sbjct: 1   IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTV 60
Query: 100 TLGEHDRLSKNE 111
            LG   R+   E
Sbjct: 61  ILGRTYRVVPGE 72

>pdb|1UTJ|A Chain A, Trypsin Specificity As Elucidated By Lie Calculations, X-Ray Structures And Association Constant Measurements Length = 242

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 43  RNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
            + +IVGG   K +  P   +L   G  +CG +L+ +  V++AAHC +      ++V LG
Sbjct: 17  EDDKIVGGYECKPYSQPHQVSL-NSGYHFCGGSLVNENWVVSAAHCYK----SRVEVRLG 71
Query: 103 EHD 105
           EH+
Sbjct: 72  EHN 74

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	124
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	2e-31
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	1e-29
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	8e-29
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	1e-28
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	5e-28
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	2e-27
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	7e-27
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	8e-27
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	1e-26
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	1e-26
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	2e-26
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	2e-26
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	2e-26
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	3e-26
1md8_A	329	C1R complement serine protease; innate immunity, a	4e-26
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	4e-26
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	6e-26
1a7s_A	225	Heparin binding protein; serine protease homolog,	1e-25
1gpz_A	399	Complement C1R component; hydrolase, activation, i	3e-25
1elv_A	333	Complement C1S component; trypsin-like serin prote	3e-25
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	5e-25
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	8e-25
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	3e-24
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	4e-24
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	5e-24
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	6e-24
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	7e-24
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	8e-24
1aut_C	250	Activated protein C; serine proteinase, plasma cal	1e-23
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	2e-23
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	2e-23
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	2e-23
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	3e-23
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	4e-23
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	5e-23
2xrc_A	565	Human complement factor I; immune system, hydrolas	5e-23
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	6e-23
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	7e-23
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	1e-22
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	1e-22
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	2e-22
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	2e-22
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	3e-22
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	3e-22
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	3e-22
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	4e-22
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	4e-22
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	4e-22
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	4e-22
2pka_A	80	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	7e-22
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	9e-22
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	1e-21
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	1e-21
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	1e-21
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	2e-21
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	2e-21
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	2e-21
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	2e-21
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	2e-21
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	3e-21
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	4e-21
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	4e-21
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	9e-21
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	1e-20
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	1e-20
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	3e-20
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	3e-20
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	3e-20
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	4e-20
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	4e-20
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	5e-20
2aiq_A	231	Protein C activator; snake venom serine proteinase	6e-20
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	7e-20
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	9e-20
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	1e-19
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	1e-19
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	2e-19
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	2e-19
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	2e-19
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	2e-19
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	3e-19
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	4e-19
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	4e-19
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	8e-19
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	1e-18
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	5e-18
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	9e-18
3hrz_D	741	Complement factor B; serine protease, glycosilated	1e-17
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	3e-16
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	1e-15
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	3e-15
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	9e-08
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	3e-07
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	2e-06
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	3e-05

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score =  113 bits (285), Expect = 2e-31
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 18  DFNVDDLTTINSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAAL----TKKGKFYCG 73
             N+   + + S     N  CG    +QR+  G   KL   PW+A L      + +F CG
Sbjct: 91  SANIQHNSKVMSLFKDENFDCGNF-LSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCG 149

Query: 74  ATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVP 114
             +I++R++LTAAHC+ G+     ++ LGEH   ++ +   
Sbjct: 150 GAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQ 190

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score =  109 bits (273), Expect = 1e-29
 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 10/98 (10%)

Query: 29  SSMNHCNCACGQVERN--QRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAA 86
            S+  C   CG   R    +I GG   K  +FPW   +   G       L+    VLTAA
Sbjct: 142 KSLPVCEPVCGLSARTTGGQIYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAA 199

Query: 87  HCIEG--VNPKEIKVTLGEHDRLSKNESVP----VIIH 118
           H +     +   + + +G   RLS + +      V IH
Sbjct: 200 HAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIH 237

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score =  104 bits (262), Expect = 8e-29
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 9/93 (9%)

Query: 28  NSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKG-----KFYCGATLIAKRHV 82
           N         CG      +I+ G+ T   EFPW A +  K      +F CG +LI  R++
Sbjct: 4   NRRPELLPNDCGYQVEADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYI 63

Query: 83  LTAAHCIEG----VNPKEIKVTLGEHDRLSKNE 111
           +TAAHC+ G    V     KV LGE +  +  +
Sbjct: 64  VTAAHCVAGRVLRVVGALNKVRLGEWNTATDPD 96

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score =  104 bits (262), Expect = 1e-28
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 17/114 (14%)

Query: 28  NSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTA 85
            S  +       +   + RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTA
Sbjct: 12  KSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTA 71

Query: 86  AHCI------EGVNPKEIKVTLGEHDRLSKNESVP-------VIIH--FSVSNT 124
           AHC+      +     ++ V +G+H R     ++        + IH  ++    
Sbjct: 72  AHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWREN 125

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score =  104 bits (262), Expect = 5e-28
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 17/114 (14%)

Query: 28  NSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTA 85
            S  +       +   + RIV G+  ++   PW   L +K   +  CGA+LI+ R VLTA
Sbjct: 147 KSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTA 206

Query: 86  AHCIE------GVNPKEIKVTLGEHDRLSKNESVP-------VIIH--FSVSNT 124
           AHC+            ++ V +G+H R     ++        + IH  ++    
Sbjct: 207 AHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWREN 260

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score =   99 bits (250), Expect = 2e-27
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG  + + + PW   +    K +CG +++    V+TAA C++G  P +I +  G   R
Sbjct: 1   IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYR 60

Query: 107 LSKNESVPV--IIH 118
            +K  SV    I  
Sbjct: 61  TTKGTSVMAKKIYI 74

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score =  101 bits (253), Expect = 7e-27
 Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 35  NCACGQVERNQ---RIVGG-NVTKLHEFPWIAALTKKG--------KFYCGATLIAKRHV 82
              CG         +I G  N  +  EFPW+ A+ K          +  CG +LIA   V
Sbjct: 115 PSFCGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVV 174

Query: 83  LTAAHCIEGV--NPKEIKVTLGEHDRLSKNESVP--------VIIH 118
           LT AHC+     N   IK+  GE D L++ E +P        VIIH
Sbjct: 175 LTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIH 220

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score = 98.0 bits (245), Expect = 8e-27
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG      +FP+I ++++ G  +CG +L+    VLTAAHC+ G      ++  G   R
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSR 60

Query: 107 LSKNESVPV---IIH 118
            S   +  +    +H
Sbjct: 61  TSGGITSSLSSVRVH 75

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score = 97.6 bits (244), Expect = 1e-26
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 7/78 (8%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H +P++ +L  +G  +CGATLIA   V++AAHC+  VN + ++V LG H+ 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHN- 59

Query: 107 LSKNE------SVPVIIH 118
           LS+ E      +V  I  
Sbjct: 60  LSRREPTRQVFAVQRIFE 77

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score = 98.9 bits (247), Expect = 1e-26
 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 15/117 (12%)

Query: 22  DDLTTINSSMNHCNCACGQ-----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATL 76
           D L T+    +    ACG+          RI+GG+ +     PW+AA+   G  +C  +L
Sbjct: 6   DLLATLPEPASPGRQACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAI-YIGDSFCAGSL 64

Query: 77  IAKRHVLTAAHCIEG-VNPKEIKVTLGEHDRLSKNESVP------VIIH--FSVSNT 124
           +    V++AAHC         + V LG+H      +          I +  +SV N 
Sbjct: 65  VHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNP 121

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score = 97.7 bits (244), Expect = 2e-26
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 8/80 (10%)

Query: 47  IVGGNVTKLHEFPWIAALTKK--GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           IVGG   + +EFPW  ++ +K     +CG ++I  R V+ AAHC++G  P  + + +GEH
Sbjct: 1   IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEH 60

Query: 105 DRLSKNESVP------VIIH 118
           D  + +          + ++
Sbjct: 61  DSSAASTVRQTHDVDSIFVN 80

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score =  100 bits (250), Expect = 2e-26
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 35  NCACGQ-VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-- 91
              CG+      RIVGG  T L  +PW  +L   G   CG +L++   VLTAAHC     
Sbjct: 105 CQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERN 164

Query: 92  VNPKEIKVTLGEHDRLSKNE-SVPV---IIH 118
                 +V  G   + S +   + V   + H
Sbjct: 165 RVLSRWRVFAGAVAQASPHGLQLGVQAVVYH 195

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score = 97.3 bits (243), Expect = 2e-26
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           +VGG   K  +FPW   L  K   +CG +++ ++ ++TAAHC+E     +I V  GEH+ 
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVE--TGVKITVVAGEHNI 58

Query: 107 LSKNESVP------VIIH 118
                +        +I H
Sbjct: 59  EETEHTEQKRNVIRIIPH 76

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score = 98.6 bits (246), Expect = 4e-26
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 16/99 (16%)

Query: 34  CNCACGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCI 89
           C   CG+    VE+ QRI+GG   K+  FPW       G    G  L+  R +LTAAH +
Sbjct: 73  CLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTL 130

Query: 90  EG-----VNPKEIKVTLGEHDRLSKNESVP-----VIIH 118
                   +   + V LG  +     +        V +H
Sbjct: 131 YPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVH 169

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score = 96.9 bits (242), Expect = 4e-26
 Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 7/79 (8%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 105
           IVGG V    E PW   L   G   CG TLI    V++AAHC + + N + +   LGEHD
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHD 60

Query: 106 RLSKNESVP------VIIH 118
               +          VII 
Sbjct: 61  LSEHDGDEQSRRVAQVIIP 79

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score = 96.1 bits (240), Expect = 6e-26
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 9/81 (11%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGEH 104
           IVGG+  K   +PW+  L    +  CGA+L++   +++AAHC+ G  + P +    LG H
Sbjct: 1   IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLH 60

Query: 105 DRLSKNESVP-------VIIH 118
            + +             ++I+
Sbjct: 61  MKSNLTSPQTVPRLIDEIVIN 81

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score = 94.9 bits (237), Expect = 1e-25
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   +  +FP++A++  +G+ +CG  LI  R V+TAA C +  NP    V LG +D 
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYD- 59

Query: 107 LSKNES 112
           L + E 
Sbjct: 60  LRRRER 65

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 97.2 bits (242), Expect = 3e-25
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 16/99 (16%)

Query: 34  CNCACGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCI 89
           C   CG+    VE+ Q+I+GG   K+  FPW       G    G  L+  R +LTAAH +
Sbjct: 141 CLPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTL 198

Query: 90  EG-----VNPKEIKVTLGEHDRLSKNESVP-----VIIH 118
                   +   + V LG  +     +        V +H
Sbjct: 199 YPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVH 237

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score = 96.4 bits (240), Expect = 3e-25
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 16/101 (15%)

Query: 29  SSMNHCNCACGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLT 84
             +  C   CG      E  QRI+GG+   +  FPW          + G  LI +  VLT
Sbjct: 61  PELPKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFF---DNPWAGGALINEYWVLT 117

Query: 85  AAHCIEGVNPKEIKVTLGEHDRLSKNESVP-------VIIH 118
           AAH +EG   +E  + +G     +   +         V IH
Sbjct: 118 AAHVVEG--NREPTMYVGSTSVQTSRLAKSKMLTPEHVFIH 156

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score = 93.8 bits (234), Expect = 5e-25
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G+ +
Sbjct: 1   IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLY--QAKRFKVRVGDRN 58

Query: 106 RLSKNESVP------VIIH 118
              +           VI H
Sbjct: 59  TEQEEGGEAVHEVEVVIKH 77

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score = 93.5 bits (233), Expect = 8e-25
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGEH 104
           I GG   K  +FPW   +   G       L+    VLTAAH +     +   + + +G  
Sbjct: 1   IYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTL 58

Query: 105 DRLSKNESVP----VIIH 118
            RLS + +      V IH
Sbjct: 59  KRLSPHYTQAWSEAVFIH 76

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score = 92.4 bits (230), Expect = 3e-24
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 17/95 (17%)

Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCIEG------VNPKEIK 98
           IV G+  ++   PW   L +K   +  CGA+LI+ R VLTAAHC+            ++ 
Sbjct: 1   IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60

Query: 99  VTLGEHDRLSKNESVP-------VIIH--FSVSNT 124
           V +G+H R     ++        + IH  ++    
Sbjct: 61  VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWREN 95

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score = 91.5 bits (228), Expect = 4e-24
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 8/80 (10%)

Query: 47  IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           ++GG      EFPW  +  ++       CGA+L++    L+A+HC++GV P  I+V  G 
Sbjct: 1   VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGL 60

Query: 104 HDRLSKNESVP-----VIIH 118
             +   + +         +H
Sbjct: 61  WQQSDTSGTQTANVDSYTMH 80

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score = 90.7 bits (226), Expect = 5e-24
 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 105
           +VGG      EFP++  L       CG  L A+  VLTAAHC+ G  N   I  T G  D
Sbjct: 1   VVGGTRAAQGEFPFMVRL----SMGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVD 56

Query: 106 RLSKNE-SVPV---IIH 118
             S +   V     +  
Sbjct: 57  LQSSSAVKVRSTKVLQA 73

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score = 91.1 bits (227), Expect = 6e-24
 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 46  RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKVTLGEH 104
            I+GG     H  P++A++   G   CG  LI  + VLTAAHC       +   V LG H
Sbjct: 2   EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAH 61

Query: 105 DRLSKNES 112
             LSKNE+
Sbjct: 62  S-LSKNEA 68

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score = 90.7 bits (226), Expect = 7e-24
 Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + H  P++A++   G   CG  L+A++ VL+AAHC+E     +++V LG H  
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHS- 59

Query: 107 LSKNES 112
           LS+ E 
Sbjct: 60  LSQPEP 65

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score = 93.9 bits (233), Expect = 8e-24
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 34  CNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV- 92
            +  CG        +  N +     PW   +  K +  C   LI+ + VLTAAHC     
Sbjct: 216 TDTICGV-----GNMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGN 270

Query: 93  NPKEIKVTLGEHDRLSKNES--VPVIIH 118
           +    +V +G+       E      +I 
Sbjct: 271 DHSLWRVNVGDPKSQWGKEFLIEKAVIS 298

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score = 90.8 bits (226), Expect = 1e-23
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)

Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           ++ G +T+  + PW   L   K K  CGA LI    VLTAAHC++    K++ V LGE+D
Sbjct: 1   LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMD--ESKKLLVRLGEYD 58

Query: 106 RLSKNESVP------VIIH 118
                +         V +H
Sbjct: 59  LRRWEKWELDLDIKEVFVH 77

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score = 89.6 bits (223), Expect = 2e-23
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKVTLGEHD 105
           I+GG+ +     PW+AA+   G  +C  +L+    V++AAHC         + V LG+H 
Sbjct: 1   IIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHF 59

Query: 106 RLSKNESVP------VIIH--FSVSNT 124
                +          I +  +SV N 
Sbjct: 60  FNRTTDVTQTFGIEKYIPYTLYSVFNP 86

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score = 89.6 bits (223), Expect = 2e-23
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 105
           IVGG   +  E+PW A+L   G   CGATLI    +++AAHC     NP     + G   
Sbjct: 1   IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTI 60

Query: 106 RLSKNESVPV---IIH 118
           +        +   I+H
Sbjct: 61  K-PSKMKRGLRRIIVH 75

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score = 89.1 bits (222), Expect = 2e-23
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 105
           IVGG    + ++P+  +L   G   CGA+++   +VLTAAHC++G+ N   +KV +G + 
Sbjct: 1   IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNY 60

Query: 106 RLSKNESVPV---IIH 118
                +   V   +++
Sbjct: 61  LSESGDVYDVEDAVVN 76

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score = 88.7 bits (221), Expect = 3e-23
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)

Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           IVGG+  + H  P++A+L      G  +CG TLI    VLTAAHC+  +  + + V LG 
Sbjct: 1   IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGA 60

Query: 104 HDRLSKNES 112
           H+ +   E 
Sbjct: 61  HN-VRTQEP 68

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score = 88.8 bits (221), Expect = 4e-23
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG     H  P++A+L + G   CG  L+  + VLTAAHC+      ++++ LG H  
Sbjct: 1   IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQ-RMAQLRLVLGLHTL 59

Query: 107 LSKNESVPV---IIH 118
            S   +  +   I H
Sbjct: 60  DSPGLTFHIKAAIQH 74

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score = 88.8 bits (221), Expect = 5e-23
 Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 13/94 (13%)

Query: 38  CGQ-----VERNQRIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEG 91
           CG+      +   R+VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC+E 
Sbjct: 4   CGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEK 63

Query: 92  -VNPKEIKVTLGEHDRLSKNESVP------VIIH 118
              P   KV LG H  ++    V       + + 
Sbjct: 64  SPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLE 97

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score = 91.5 bits (227), Expect = 5e-23
 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 11/101 (10%)

Query: 29  SSMNHCNCACGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLT 84
                   +CG       R +RIVGG   +L + PW  A+       CG   I    +LT
Sbjct: 300 IKSLLPKLSCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILT 359

Query: 85  AAHCIEGVNPKEIKVTLGEHDRLSKNESVP-------VIIH 118
           AAHC+        ++     D +  +           +I H
Sbjct: 360 AAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFH 400

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score = 88.8 bits (221), Expect = 6e-23
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 17/96 (17%)

Query: 38  CG----QVERNQRIVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCI 89
           CG    Q   + R+VGG     H +PW  +L        +  CG TLI   HVLTAAHCI
Sbjct: 1   CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60

Query: 90  EGVNPKEIKVTLGEHDRLSKNES----VPV---IIH 118
              N    +V LG+++   ++E+    V V    +H
Sbjct: 61  S--NTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVH 94

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score = 88.5 bits (220), Expect = 7e-23
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 13/85 (15%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGK------FYCGATLIAKRHVLTAAHCIEG-VNPKEIKV 99
           I GG    +   PW AA+  K +      F CG  LI+   +L+AAHC +    P  + V
Sbjct: 1   IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTV 60

Query: 100 TLGEHDRLSKNESVP------VIIH 118
            LG   R+   E          I+H
Sbjct: 61  ILGRTYRVVPGEEEQKFEVEKYIVH 85

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score = 87.7 bits (218), Expect = 1e-22
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 13/85 (15%)

Query: 47  IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEG---VNPKEIKV 99
           IVGG    L EFP+  +           +CGA++  + + +TA HC+ G    NP  +++
Sbjct: 1   IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQI 60

Query: 100 TLGEHDRLSKNESVP------VIIH 118
             GE D      S        +I+H
Sbjct: 61  VAGELDMSVNEGSEQIITVSKIILH 85

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 90.7 bits (225), Expect = 1e-22
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 10/100 (10%)

Query: 29  SSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTA 85
           +            +   RIVGG  +   E+PW   L       +  CG ++I  + +LTA
Sbjct: 370 TLRLCKMDNECTTKIKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTA 429

Query: 86  AHCIEGV-NPKEIKVTLGEHDRLSKNESVP------VIIH 118
           AHC  GV +PK ++V  G  ++    E         +IIH
Sbjct: 430 AHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIH 469

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score = 86.8 bits (216), Expect = 2e-22
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 3/74 (4%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG     + +P  AAL     ++CG +LI+   +LTAAHC++G     + V LG H+ 
Sbjct: 1   IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDG--AGFVDVVLGAHN- 57

Query: 107 LSKNESVPVIIHFS 120
           + ++E+  V I  +
Sbjct: 58  IREDEATQVTIQST 71

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score = 86.8 bits (216), Expect = 2e-22
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 10/78 (12%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           ++GG+   ++E   + A      F+C  TLI +  VLTAAHC    +    ++ LG H +
Sbjct: 1   VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHC----DNTNFQMKLGVHSK 56

Query: 107 LSKNES------VPVIIH 118
              NE           I 
Sbjct: 57  KVLNEDEQTRNPKEKFIC 74

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score = 86.5 bits (215), Expect = 3e-22
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 12/82 (14%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-----VNPKEIKVTL 101
           I+GG   K+  FPW       G    G  L+  R +LTAAH +        +   + V L
Sbjct: 1   IIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 58

Query: 102 GEHDRLSKNESVP-----VIIH 118
           G  +     +        V +H
Sbjct: 59  GHTNVEELMKLGNHPIRRVSVH 80

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score = 87.0 bits (216), Expect = 3e-22
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 21/93 (22%)

Query: 47  IVGGNVTKLHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCIEG-------------- 91
           I  G   +    PWIA L+   G+ +CG +L+    ++TAAHC+                
Sbjct: 1   IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDL 60

Query: 92  VNPKEIKVTLGEHDRLSKNESVP------VIIH 118
           ++P + K+ LG+H RL  +E+          +H
Sbjct: 61  LSPSDFKIILGKHWRLRSDENEQHLGVKHTTLH 93

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score = 86.5 bits (215), Expect = 3e-22
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 46  RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
             V   V   +  PW  A+ +  K+ CG  L+ +  VLTAAHC       + +V LG+++
Sbjct: 3   PPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCY----NDKYQVWLGKNN 58

Query: 106 RLSKNESVPVI 116
            L    S    
Sbjct: 59  FLEDEPSDQHR 69

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score = 86.0 bits (214), Expect = 4e-22
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+     K  KV +G+ +
Sbjct: 1   IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLY--QAKRFKVRVGDRN 58

Query: 106 RLSKNESVPVI 116
              +     V 
Sbjct: 59  TEQEEGGEAVH 69

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score = 86.1 bits (214), Expect = 4e-22
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 14/86 (16%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKF-YCGATLIAKRHVLTAAHCIEG------VNPKEIKV 99
           +VGG      E+PW  +L   G+   CGA+LI+   +++AAHC          +P +   
Sbjct: 1   VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60

Query: 100 TLGEHDRLSKNESVP-------VIIH 118
            LG HD+  ++           +I H
Sbjct: 61  FLGLHDQSQRSAPGVQERRLKRIISH 86

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score = 86.1 bits (214), Expect = 4e-22
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 10/82 (12%)

Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW  +L       +  CG +LI  + VLTAAHC +G+      ++  G
Sbjct: 1   IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSG 60

Query: 103 EHDRLSKNESVP------VIIH 118
             +     +  P      +IIH
Sbjct: 61  ILELSDITKDTPFSQIKEIIIH 82

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score = 86.6 bits (215), Expect = 4e-22
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKVTLGEHD 105
           I GG+     ++PW  ++T +G   CG +L++++ VL+AAHC     + +  +V LG H 
Sbjct: 1   ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQ 60

Query: 106 RLSKNESVP------VIIH 118
             S +E         +I H
Sbjct: 61  LDSYSEDAKVSTLKDIIPH 79

>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A Length = 80

 Score = 81.4 bits (202), Expect = 7e-22
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + +  PW  A+     F CG  L+  + VLTAAHC         +V LG H+ 
Sbjct: 1   IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCK----NDNYEVWLGRHN- 55

Query: 107 LSKNES 112
           L +NE+
Sbjct: 56  LFENEN 61

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score = 85.4 bits (212), Expect = 9e-22
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 12/84 (14%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGK-----FYCGATLIAKRHVLTAAHCIEG-VNPKEIKVT 100
           I+GG  T +   PW AA+ ++ +     + CG +LI+   V++A HC       ++  V 
Sbjct: 1   IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60

Query: 101 LGEHDRLSKNESVP------VIIH 118
           LG     S  +         +I+H
Sbjct: 61  LGRSRLNSNTQGEMKFEVENLILH 84

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score = 85.3 bits (212), Expect = 1e-21
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 4/70 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H  PW AAL     F CG  L+ ++ VLTAAHCI        ++ LG H+ 
Sbjct: 1   IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISD----NYQLWLGRHNL 56

Query: 107 LSKNESVPVI 116
                +   +
Sbjct: 57  FDDENTAQFV 66

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score = 84.9 bits (211), Expect = 1e-21
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           +V G        P+ AAL   G   CG  LI    VLTAAHC        ++V LG+H+ 
Sbjct: 1   LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHC----KKPNLQVFLGKHNL 56

Query: 107 LSKNESVPVI 116
             +  S    
Sbjct: 57  RQRESSQEQS 66

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score = 84.9 bits (211), Expect = 1e-21
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+ G     H  PW AAL  + + +C   L+  + VL+AAHC          + LG H  
Sbjct: 1   IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCF----QNSYTIGLGLHSL 56

Query: 107 LSKNES 112
            +  E 
Sbjct: 57  EADQEP 62

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score = 84.5 bits (210), Expect = 2e-21
 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GGN    H  P++  L+   K  C   LIAK  VLTAAHC      K  +V LG H  
Sbjct: 1   IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN---KRSQVILGAHS- 56

Query: 107 LSKNES 112
           +++ E 
Sbjct: 57  ITREEP 62

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score = 84.5 bits (210), Expect = 2e-21
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+ G     H  PW AAL +  +  CG  L+  R VLTAAHC      ++  V LG+H  
Sbjct: 1   ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHC----KKQKYSVRLGDHSL 56

Query: 107 LSKNESVPVI 116
            S+++    I
Sbjct: 57  QSRDQPEQEI 66

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score = 84.1 bits (209), Expect = 2e-21
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+ G        PW  AL    + +CG  L+ +R VLTAAHC       E  V LG    
Sbjct: 1   IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHC----KMNEYTVHLGSDTL 56

Query: 107 LSKNE-SVPV---IIH 118
             +    +       H
Sbjct: 57  GDRRAQRIKASKSFRH 72

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score = 84.6 bits (210), Expect = 2e-21
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEG--VNPKEIKVTL 101
           IVGG      ++PW  +L  + +++   CG +LI  + VLTAAHC+     +   ++V L
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQL 60

Query: 102 GEHDRLSKNESVPV---IIH 118
            E     +++ +PV   I+H
Sbjct: 61  REQHLYYQDQLLPVSRIIVH 80

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score = 84.2 bits (209), Expect = 2e-21
 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 49  GGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           GG  T + + PW  A+     +    CG  ++++  VLTAAHC+    P+ I +     +
Sbjct: 2   GGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTN 61

Query: 106 RLSKNESVP----VIIH 118
                         +  
Sbjct: 62  LWEDPGKSDPYVSHVYL 78

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score = 83.8 bits (208), Expect = 3e-21
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 10/82 (12%)

Query: 47  IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L       +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

Query: 103 EHDRLSKNESVP------VIIH 118
             ++    E         +IIH
Sbjct: 61  ILNQSEIKEDTSFFGVQEIIIH 82

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score = 83.4 bits (207), Expect = 4e-21
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + H  PW  A+  +G F CG  L+  + VLTAAHC+      + ++ LG H+ 
Sbjct: 1   IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCM----SDDYQIWLGRHNL 56

Query: 107 LSKNESVPVI 116
               ++    
Sbjct: 57  SKDEDTAQFH 66

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score = 83.8 bits (208), Expect = 4e-21
 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 16/94 (17%)

Query: 38  CGQ------VERNQRIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIE 90
           CG       +    RIV G       +PW  +L  K G  +CG +LI +  V+TAAHC  
Sbjct: 1   CGVPAIQPVLSGLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHC-- 58

Query: 91  GVNPKEIKVTLGEHDRLSKNESVP------VIIH 118
                   V  GE D+ S +E +       V  +
Sbjct: 59  -GVTTSDVVVAGEFDQGSSSEKIQKLKIAKVFKN 91

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score = 82.6 bits (205), Expect = 9e-21
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 9/79 (11%)

Query: 47  IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+ G       FP+ A L      + + +CG +LI  + +LTAAHC+       + V LG
Sbjct: 1   IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD--AVSVVVYLG 58

Query: 103 EHDRLSKNESVPV---IIH 118
              +      V     I H
Sbjct: 59  SAVQYEGEAVVNSERIISH 77

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score = 82.7 bits (205), Expect = 1e-20
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H  PW   +  +G+  CG  L+  + VLTAAHCI      +  + LG H  
Sbjct: 1   IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCI----RNKSVILLGRHSL 56

Query: 107 LSKNESVPVI 116
               ++  V 
Sbjct: 57  FHPEDTGQVF 66

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score = 81.8 bits (203), Expect = 1e-20
 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 8/69 (11%)

Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG+  K H  P++A L    +K    CG  LI    VLTAAHC        I VTLG 
Sbjct: 1   IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCW----GSSINVTLGA 56

Query: 104 HDRLSKNES 112
           H+ + + E 
Sbjct: 57  HN-IKEQEP 64

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score = 81.5 bits (202), Expect = 3e-20
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           +V G  T+     W+ +L  + K  CG +LI +  VLTA  C    + K+ +  LG HD 
Sbjct: 1   VVNGIPTR-TNIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHD- 58

Query: 107 LSKNESVPVIIHFSVSN 123
           +            +VS 
Sbjct: 59  VHGRGDEKCKQVLNVSQ 75

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score = 81.1 bits (201), Expect = 3e-20
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 5/67 (7%)

Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           I+ G+   +H  PW AAL  +  + YCGA L+  + +LTAAHC      K  +V LG + 
Sbjct: 1   IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHC----RKKVFRVRLGHYS 56

Query: 106 RLSKNES 112
                ES
Sbjct: 57  LSPVYES 63

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score = 81.1 bits (201), Expect = 3e-20
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)

Query: 47  IVGGNVTKLHEFPWIAAL--TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           I+GG+   ++E  ++ AL  ++    +CG TLI +  VLTAAHC    + K  ++ LG H
Sbjct: 1   IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHC----DRKNFRIKLGMH 56

Query: 105 DRLSKNESVPVII 117
            +   NE     +
Sbjct: 57  SKKVPNEDEQTRV 69

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score = 81.1 bits (201), Expect = 4e-20
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           +VGG   + +  PW  A+  + +  CG  L+ +  VLTAAHC       + +V LG++  
Sbjct: 1   VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCY----VDQYEVWLGKNKL 56

Query: 107 LSKNESVPVI 116
             +  S    
Sbjct: 57  FQEEPSAQHR 66

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score = 80.6 bits (200), Expect = 4e-20
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)

Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG  ++ H  P++A L   +  G+  CG  L+ +  VLTAAHC        I VTLG 
Sbjct: 1   IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW----GSNINVTLGA 56

Query: 104 HDRLSKNES 112
           H+ + + E+
Sbjct: 57  HN-IQRREN 64

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score = 80.7 bits (200), Expect = 5e-20
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%)

Query: 47  IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           +VGG+   ++E P++ AL        +C   LI +  VLTAAHC    + + I++ LG H
Sbjct: 1   VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHC----DRRNIRIKLGMH 56

Query: 105 DRLSKNESVPVII 117
            +  +NE   + +
Sbjct: 57  SKNIRNEDEQIRV 69

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score = 80.3 bits (199), Expect = 6e-20
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 5/66 (7%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           ++GG+   ++E  ++A +       CG TLI +  VLTA HC    +   +++ LG H+ 
Sbjct: 1   VIGGDECNINEHRFLALV-YANGSLCGGTLINQEWVLTARHC----DRGNMRIYLGMHNL 55

Query: 107 LSKNES 112
              N+ 
Sbjct: 56  KVLNKD 61

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score = 81.3 bits (201), Expect = 7e-20
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 18/90 (20%)

Query: 47  IVGGNVTKLHEFPWIAAL------TKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKV 99
           I+GG       +PW+ +L        +    CG +L+  + +LTAAHC        + ++
Sbjct: 1   IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRL 60

Query: 100 TLGEHDRLSKNESVP-----------VIIH 118
             G  +                    +IIH
Sbjct: 61  IFGAKEVEWGTNKPVKPPLQERYVEKIIIH 90

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score = 82.3 bits (203), Expect = 9e-20
 Identities = 27/111 (24%), Positives = 39/111 (35%), Gaps = 18/111 (16%)

Query: 19  FNVDDLTTINSSMNHC------NCACGQVERNQRIVGGNVTKLHEFPWIAAL----TKKG 68
             V D+  +                CG             T  H+ PW A +      KG
Sbjct: 186 CKVKDMECLEDVFYQMIDESQSLSLCGM-----VWEHRKGTDYHKQPWQAKISVIRPSKG 240

Query: 69  KFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKNESVPVIIH 118
              C   ++++  VLTAAHC         IKV++G   R  + E   V+ H
Sbjct: 241 HESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEV--VLFH 289

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ... Length = 131

 Score = 77.2 bits (191), Expect = 1e-19
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 10/79 (12%)

Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           IV G       +PW  +L  K G  +CG +LI +  V+TAAHC          V  GE D
Sbjct: 1   IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGV---TTSDVVVAGEFD 57

Query: 106 RLSKNESVP------VIIH 118
           + S +E +       V  +
Sbjct: 58  QGSSSEKIQKLKIAKVFKN 76

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score = 79.1 bits (196), Expect = 1e-19
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 9/70 (12%)

Query: 47  IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG  +  H  P++A L     K  +  CG  LI+++ VLTAAHC      +EI V LG
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK----GREITVILG 56

Query: 103 EHDRLSKNES 112
            HD + K ES
Sbjct: 57  AHD-VRKRES 65

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score = 79.1 bits (196), Expect = 2e-19
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           I+GG+  K H  P++A L   T      CG  L+ +  VLTAAHC+       I VTLG 
Sbjct: 1   IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCL----GSSINVTLGA 56

Query: 104 HDRLSKNES 112
           H+ + + E 
Sbjct: 57  HN-IMERER 64

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score = 79.1 bits (196), Expect = 2e-19
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%)

Query: 47  IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG   K H  P++A L    +     +CG  LI +  VLTAAHC      + I VTLG
Sbjct: 1   IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA----GRSITVTLG 56

Query: 103 EHDRLSKNES 112
            H+ +++ E 
Sbjct: 57  AHN-ITEEED 65

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score = 79.2 bits (196), Expect = 2e-19
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 12/82 (14%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGK----FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           +VGG V + + +PW  +L  K        CG +LI +  V+TAAHC++  + +  +V LG
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVD--SARTWRVVLG 58

Query: 103 EHDRLSKNESVP------VIIH 118
           EH+  +            V IH
Sbjct: 59  EHNLNTNEGKEQIMTVNSVFIH 80

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score = 79.2 bits (196), Expect = 2e-19
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 12/82 (14%)

Query: 47  IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           +VGG   + + +PW  +L    + + +  CG TL+ +  VLTAAHCI   + +  +V LG
Sbjct: 1   VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS--SSRTYRVVLG 58

Query: 103 EHDRLSKNESVP------VIIH 118
            H   +            +++H
Sbjct: 59  RHSLSTNEPGSLAVKVSKLVVH 80

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score = 78.3 bits (194), Expect = 3e-19
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 47  IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GGN    H  P++A          K +CG  L+  + VLTAAHC      + + VTLG
Sbjct: 1   IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCK----GRSMTVTLG 56

Query: 103 EHDRLSKNES 112
            H+ +   E 
Sbjct: 57  AHN-IKAKEE 65

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score = 78.4 bits (194), Expect = 4e-19
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 12/82 (14%)

Query: 47  IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           +VGG   + + +P   +L           CG TLI +  V+TAAHC++       +V +G
Sbjct: 1   VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD--RELTFRVVVG 58

Query: 103 EHDRLSKNESVP------VIIH 118
           EH+    N +        +++H
Sbjct: 59  EHNLNQNNGTEQYVGVQKIVVH 80

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score = 77.9 bits (193), Expect = 4e-19
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   K +  P   +L   G  +CG +L+ +  V++AAHC        ++V LGEH+ 
Sbjct: 1   IVGGYECKAYSQPHQVSL-NSGYHFCGGSLVNENWVVSAAHCY----KSRVEVRLGEHNI 55

Query: 107 LSKNESVPVI 116
                S   I
Sbjct: 56  KVTEGSEQFI 65

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score = 77.6 bits (192), Expect = 8e-19
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + +  PW  A+    ++ CG  LI    V+TAAHC         +V LG ++ 
Sbjct: 1   IVGGYKCEKNSQPWQVAVI--NEYLCGGVLIDPSWVITAAHCY----SNNYQVLLGRNNL 54

Query: 107 LSKNESVPVI 116
                     
Sbjct: 55  FKDEPFAQRR 64

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score = 76.8 bits (190), Expect = 1e-18
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG     +  P+  +L   G  +CG +LI  + V++AAHC        I+V LGE + 
Sbjct: 1   IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCY----KSGIQVRLGEDNI 55

Query: 107 LSKNESVPVI 116
                +   I
Sbjct: 56  NVVEGNEQFI 65

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 76.3 bits (188), Expect = 5e-18
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 9/92 (9%)

Query: 34  CNCACGQVE---RNQRIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCI 89
            +  C   +               L + PW   L   +GK +CG  +I +  VLT A C 
Sbjct: 37  DHKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCS 96

Query: 90  EGVNPKEIKVTLGEHDRLSKNESVPV---IIH 118
                + I V    +        + +    +H
Sbjct: 97  LL--HRNITVKTYFNRTSQDPLMIKITHVHVH 126

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 75.9 bits (187), Expect = 9e-18
 Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 6/91 (6%)

Query: 32  NHCNCACGQVERNQRIVGGNVTKLHEFPWIAALT-KKGKFYCGATLIAKRHVLTAAHCIE 90
           +       Q              L + PW   LT  +GK +CG  +I +  VLT A C  
Sbjct: 79  HKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSL 138

Query: 91  GVNPKEIKVTLGEHDRLSKNESVPV---IIH 118
               + I V    +        + +    +H
Sbjct: 139 L--HRNITVKTYFNRTSQDPLMIKITHVHVH 167

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 76.7 bits (188), Expect = 1e-17
 Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 18/111 (16%)

Query: 19  FNVDDLTTINSSMNH------CNCACGQVERNQRIVGGNVTKLHEFPWIAAL----TKKG 68
           F V D+  +                CG             T  H+ PW A +      KG
Sbjct: 428 FKVKDMENLEDVFYQMIDESQSLSLCGM-----VWEHRKGTDYHKQPWQAKISVIRPSKG 482

Query: 69  KFYCGATLIAKRHVLTAAHCIEG-VNPKEIKVTLGEHDRLSKNESVPVIIH 118
              C   ++++  VLTAAHC         IKV++G   R  + E   V+ H
Sbjct: 483 HESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEV--VLFH 531

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score = 70.7 bits (174), Expect = 3e-16
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 14/81 (17%)

Query: 50  GNVTKLHEFPWIAALTKKGKF----YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
           G     + + W  +L  +        CG +LIA   V+TA HCI     +  +V LGE+D
Sbjct: 2   GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS--TSRTYQVVLGEYD 59

Query: 106 RLSKNESVP--------VIIH 118
           R     S          + +H
Sbjct: 60  RSVLEGSEQVIPINAGDLFVH 80

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score = 68.8 bits (169), Expect = 1e-15
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGE 103
           +VGG+       PW  +L  ++G+ +CG +L+ ++ +LTA  C     +     +V LG 
Sbjct: 1   VVGGH---PGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGT 57

Query: 104 HDRLSKNESVPVIIHFSVSN 123
               +     P +    V+ 
Sbjct: 58  LF-QNPQHGEPSLQRVPVAK 76

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score = 69.3 bits (169), Expect = 3e-15
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 28  NSSMNHCNCACGQVERNQRIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAA 86
             S +         +   R+VGG V   H +PW  +L T+ G  +CG TLI+   VLTAA
Sbjct: 543 APSFDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAA 602

Query: 87  HCIEG-VNPKEIKVTLGEHDRLSKNESVP------VIIH 118
           HC+E    P   KV LG H  ++    V       + + 
Sbjct: 603 HCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLE 641

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A Length = 215

 Score = 47.7 bits (113), Expect = 9e-08
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 47  IVGGN-----VTKLHEFPWIA-ALTKKGKFYCGATLIAKRHVLTAAHCIE----GVNPKE 96
           +V G+     V      P+ + A    G   C  TLIA   +LT  HC+          +
Sbjct: 1   VVIGDDGRTKVANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAK 60

Query: 97  IKVTLGEHDRLSKNESVPV 115
             V  G +D  + N S  +
Sbjct: 61  GSVYPGMNDSTAVNGSANM 79

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A Length = 274

 Score = 46.7 bits (110), Expect = 3e-07
 Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 11/70 (15%)

Query: 47  IVGGN----VTKLHEFPW-----IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN--PK 95
           I+  N    +T      +     I      G F     ++ K  +LT  H ++  +  P 
Sbjct: 2   ILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPH 61

Query: 96  EIKVTLGEHD 105
            +K      +
Sbjct: 62  ALKAFPSAIN 71

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1 Length = 268

 Score = 44.3 bits (104), Expect = 2e-06
 Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 11/70 (15%)

Query: 47  IVGGN----VTKLHEFPW-----IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN--PK 95
           I+  N    +T      +     I      G F     ++ K  +LT  H ++  +  P 
Sbjct: 2   ILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPH 61

Query: 96  EIKVTLGEHD 105
            +K      +
Sbjct: 62  ALKAFPSAIN 71

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica} Length = 218

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 6/37 (16%)

Query: 59 PWIAAL---TKKGKFYCGATLIA---KRHVLTAAHCI 89
          P I  +   T +G F C A ++A   +  V TA HC+
Sbjct: 7  PHIGKVFFSTNQGDFVCSANIVASANQSTVATAGHCL 43

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	124
2pka_A	80	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	99.93
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	99.9
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	99.89
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	99.88
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	99.88
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	99.87
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	99.87
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	99.87
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	99.87
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	99.87
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	99.87
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	99.86
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	99.86
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	99.86
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	99.86
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	99.86
1md8_A	329	C1R complement serine protease; innate immunity, a	99.86
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	99.86
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	99.86
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	99.85
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	99.85
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	99.85
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	99.85
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	99.85
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	99.85
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	99.85
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	99.85
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	99.84
1gpz_A	399	Complement C1R component; hydrolase, activation, i	99.84
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	99.84
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	99.84
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	99.84
1elv_A	333	Complement C1S component; trypsin-like serin prote	99.84
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	99.84
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	99.84
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	99.84
1aut_C	250	Activated protein C; serine proteinase, plasma cal	99.84
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	99.84
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	99.84
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	99.84
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	99.84
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	99.83
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	99.83
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	99.83
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	99.83
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	99.83
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	99.83
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	99.83
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	99.83
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	99.83
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	99.83
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	99.83
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	99.83
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	99.83
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	99.83
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	99.83
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	99.83
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	99.83
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	99.83
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	99.83
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	99.83
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	99.83
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	99.83
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	99.83
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	99.83
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	99.83
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	99.83
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	99.83
2xrc_A	565	Human complement factor I; immune system, hydrolas	99.83
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	99.83
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	99.82
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	99.82
1a7s_A	225	Heparin binding protein; serine protease homolog,	99.82
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	99.82
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	99.82
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	99.82
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	99.82
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	99.82
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	99.81
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	99.81
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	99.8
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	99.8
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	99.79
2aiq_A	231	Protein C activator; snake venom serine proteinase	99.79
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	99.79
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	99.79
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	99.79
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	99.78
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.78
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	99.76
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	99.76
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	99.76
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	99.73
3hrz_D	741	Complement factor B; serine protease, glycosilated	99.67
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	99.62
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	99.6
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	99.29
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	99.28
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	99.18
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	99.15
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	99.01
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	99.01
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	98.97
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	98.79
3k6y_A	237	Serine protease, possible membrane-associated seri	98.19
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	97.8
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	97.63
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	97.36
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	97.24
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	97.08
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	97.04
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	96.94
3sti_A	245	Protease DEGQ; serine protease, PDZ domain, chaper	96.58
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	96.11
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	96.08
3stj_A	345	Protease DEGQ; serine protease, PDZ domain, protea	95.82
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	95.06
4a8c_A	436	Periplasmic PH-dependent serine endoprotease DEGQ;	94.61
1zyo_A	191	Serine protease; beta-barrel, glutamyl endopeptida	92.97
2w5e_A	163	Putative serine protease; coiled coil, transmembra	92.65
3pv2_A	451	DEGQ; trypsin fold, PDZ domain, chaperone protease	92.63
1ky9_A	448	Protease DO, DEGP, HTRA; protein quality control,	89.72
2ea3_A	189	Chymotrypsin; celloulomonas, protease, hydrolase;	88.28
1hpg_A	187	Glutamic acid specific protease; serine protease,	81.17
2h5c_A	198	Alpha-lytic protease; serine protease, acylation t	80.55

>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A

Probab=99.93  E-value=9.5e-26  Score=133.67  Aligned_cols=74  Identities=30%  Similarity=0.559  Sum_probs=62.8

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||++++...+.++|||+||+++||||||||+..    .+.|++|.+++.....      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGslIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~   76 (80)
T 2pka_A            1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKND----NYEVWLGRHNLFENENTAQFFGVTADFPHPG   76 (80)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS----CCEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCcEEEEEECCceEEEEEEEcCCEEEECHHHCCC----CcEEEEeeeEcCCCCCCcEEEEEEEEEECcC
Confidence            689999999999999999888889999999999999999999863    4579999988654322      335999999


Q ss_pred             CCCC
Q psy12894        121 VSNT  124 (124)
Q Consensus       121 y~~~  124 (124)
                      |+..
T Consensus        77 y~~~   80 (80)
T 2pka_A           77 FNLS   80 (80)
T ss_dssp             TTTC
T ss_pred             CCCC
Confidence            9863

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=99.90  E-value=9.3e-24  Score=149.81  Aligned_cols=88  Identities=28%  Similarity=0.573  Sum_probs=69.3

Q ss_pred             cCCCCCccC--CCceeCCEEcCCCCCceEEEEEeCC-----ceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeec
Q psy12894         35 NCACGQVER--NQRIVGGNVTKLHEFPWIAALTKKG-----KFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDR  106 (124)
Q Consensus        35 ~~~cg~~~~--~~ri~gg~~~~~~~~Pw~v~l~~~~-----~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~  106 (124)
                      ...||++..  ..||+||..+.+++|||||+|....     .|+||||||+++||||||||+... ....+.|++|..++
T Consensus        10 ~~~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~v~~g~~~~   89 (276)
T 2vnt_A           10 KFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRL   89 (276)
T ss_dssp             CCCTTCCCC-----CCSSEECCGGGSTTEEEEEEECSSSCEEEEEEEEEEETTEEEECGGGTTTCCCGGGEEEEESCCBS
T ss_pred             CCCCCCcCCCCCCcEECCEECCCCCCCcEEEEEEecCCCcceeEEEEEEeeCCEEEECcccccCCCCCccEEEEeeeeec
Confidence            447998653  5699999999999999999997632     378999999999999999999764 34678899998876


Q ss_pred             CCCCC------eecEEECCCCC
Q psy12894        107 LSKNE------SVPVIIHFSVS  122 (124)
Q Consensus       107 ~~~~~------~~~vi~Hp~y~  122 (124)
                      .....      ..++++||+|+
T Consensus        90 ~~~~~~~~~~~v~~i~~Hp~y~  111 (276)
T 2vnt_A           90 NSNTQGEMKFEVENLILHKDYS  111 (276)
T ss_dssp             SSCCTTCEEEEEEEEEECTTCE
T ss_pred             cCCCCceEEEEEEEEEEccccc
Confidence            65443      23499999996

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...

Probab=99.89  E-value=4.7e-23  Score=132.29  Aligned_cols=74  Identities=32%  Similarity=0.507  Sum_probs=61.8

Q ss_pred             eeCCEEcCCCCCceEEEEEe-CCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~-~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp  119 (124)
                      |+||.++.+++|||++++.. .+.++|||+||+++||||||||+..   ..+.|++|.++......      ..++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~---~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp   77 (131)
T 1yph_C            1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT---TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNS   77 (131)
T ss_dssp             CBTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGCCC---TTSEEEESCSBTTCSSSCCEEEEEEEEEECT
T ss_pred             CCCCEECCCCCcCcEEEEEeCCCCEEEEEEEeeCCEEEECHHHCCC---CCeEEEEeEccCCCCCCceEEEEEEEEEeCC
Confidence            68999999999999999987 4568999999999999999999864   45789999988653222      33589999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        78 ~y~~   81 (131)
T 1yph_C           78 KYNS   81 (131)
T ss_dssp             TCCT
T ss_pred             CCCC
Confidence            9974

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=99.88  E-value=1.1e-22  Score=145.24  Aligned_cols=97  Identities=26%  Similarity=0.426  Sum_probs=69.5

Q ss_pred             cccccCCcCcCCCCCccC-----CCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCC-CceEEE
Q psy12894         26 TINSSMNHCNCACGQVER-----NQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN-PKEIKV   99 (124)
Q Consensus        26 ~~~~~~~~~~~~cg~~~~-----~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~-~~~~~V   99 (124)
                      ......+.+...||.+..     ..||+||..+.+++|||+|++... .++|||+||+++||||||||+.... ...+.|
T Consensus        10 ~~~~~~~~~~~~CG~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~-~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V   88 (283)
T 1yc0_A           10 TLPEPASPGRQACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYIG-DSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSV   88 (283)
T ss_dssp             -----------CCSCCSCC-------CBSCEECCTTSSTTEEEEEET-TEEEEEEEEETTEEEECGGGGTTCCCGGGEEE
T ss_pred             hccCCCCCcCCCcCCcccccccCcCceECCeECCCCCCCeEEEEEcC-CcEEEEEEeeCCEEEECHHHcCCCCCCceEEE
Confidence            333334444567998653     248999999999999999999875 6899999999999999999997542 467999


Q ss_pred             EEceeecCCCCC------eecEEECCCCCC
Q psy12894        100 TLGEHDRLSKNE------SVPVIIHFSVSN  123 (124)
Q Consensus       100 ~~G~~~~~~~~~------~~~vi~Hp~y~~  123 (124)
                      ++|.++......      ..++++||+|+.
T Consensus        89 ~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~  118 (283)
T 1yc0_A           89 VLGQHFFNRTTDVTQTFGIEKYIPYTLYSV  118 (283)
T ss_dssp             EESCCBTTCCCSSCEEECEEEEEECTTCCT
T ss_pred             EEeeeecccCCCceEEEeeEEEEecCcccc
Confidence            999988654432      345999999974

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=99.88  E-value=1.2e-22  Score=144.54  Aligned_cols=88  Identities=34%  Similarity=0.578  Sum_probs=71.1

Q ss_pred             CCCCCccCCCceeCCEEcCCCCCceEEEEEeCC-----ceeEEEEEecCCEEEecccccCCC----CCceEEEEEceeec
Q psy12894         36 CACGQVERNQRIVGGNVTKLHEFPWIAALTKKG-----KFYCGATLIAKRHVLTAAHCIEGV----NPKEIKVTLGEHDR  106 (124)
Q Consensus        36 ~~cg~~~~~~ri~gg~~~~~~~~Pw~v~l~~~~-----~~~CgGsLi~~~~vlTaahC~~~~----~~~~~~V~~G~~~~  106 (124)
                      ..||......||+||..+.+++|||+|+|....     .++|||+||+++||||||||+...    ....+.|++|.++.
T Consensus        12 ~~CG~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~   91 (278)
T 2olg_A           12 NDCGYQVEADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGEWNT   91 (278)
T ss_dssp             SSCSCCCCCCCSCCSSBCCTTSSTTEEEEEEECTTCCEEEEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESCSBT
T ss_pred             hHhCCCCCCCceECCEECCCCCCCceEEEEEecCCCCcceeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCcccC
Confidence            379986667899999999999999999997642     578999999999999999999642    23468999999876


Q ss_pred             CCCCC-----------------eecEEECCCCCC
Q psy12894        107 LSKNE-----------------SVPVIIHFSVSN  123 (124)
Q Consensus       107 ~~~~~-----------------~~~vi~Hp~y~~  123 (124)
                      ....+                 ..++++||+|+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~  125 (278)
T 2olg_A           92 ATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVD  125 (278)
T ss_dssp             TCSSCEETTTTEECSSCCEEECEEEEEECTTCCT
T ss_pred             CCCccccccccccCCCCceEEeeEEEEECCCCcC
Confidence            54321                 335999999963

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=99.87  E-value=3.3e-22  Score=149.68  Aligned_cols=86  Identities=35%  Similarity=0.665  Sum_probs=71.5

Q ss_pred             CCCCccCCCceeCCEEcCCCCCceEEEEEeC--C--ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC-
Q psy12894         37 ACGQVERNQRIVGGNVTKLHEFPWIAALTKK--G--KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE-  111 (124)
Q Consensus        37 ~cg~~~~~~ri~gg~~~~~~~~Pw~v~l~~~--~--~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~-  111 (124)
                      .|| .....||+||.++.+++|||||+|.+.  +  .++|||+||+++||||||||+.......+.|++|.++.....+ 
T Consensus       110 ~CG-~~~~~rIvgG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~  188 (408)
T 2xxl_A          110 DCG-NFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDC  188 (408)
T ss_dssp             CCS-CCCCCCCCSSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTTTCTTTEEEEEESCSBTTCSCCE
T ss_pred             ccC-CCCCCceECCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcCCCCCceEEEEeeeeECCCccch
Confidence            788 445789999999999999999999762  2  5899999999999999999998655678999999988754432 


Q ss_pred             -----------------eecEEECCCCCC
Q psy12894        112 -----------------SVPVIIHFSVSN  123 (124)
Q Consensus       112 -----------------~~~vi~Hp~y~~  123 (124)
                                       ..++++||+|+.
T Consensus       189 ~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~  217 (408)
T 2xxl_A          189 RQQGRKKKCAPPVVNVGIEKHLIHEKYDA  217 (408)
T ss_dssp             EEETTEEEECCCCEEEEEEEEEECTTCBT
T ss_pred             hhcccccccCCceEEEeEEEEEeCCCCCc
Confidence                             235899999974

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=99.87  E-value=3.8e-22  Score=142.95  Aligned_cols=79  Identities=34%  Similarity=0.577  Sum_probs=63.0

Q ss_pred             CCceeCCEEcCCCCCceEEEEEeC--CceeEEEEEecCCEEEecccccCC------CCCceEEEEEceeecCCCC-----
Q psy12894         44 NQRIVGGNVTKLHEFPWIAALTKK--GKFYCGATLIAKRHVLTAAHCIEG------VNPKEIKVTLGEHDRLSKN-----  110 (124)
Q Consensus        44 ~~ri~gg~~~~~~~~Pw~v~l~~~--~~~~CgGsLi~~~~vlTaahC~~~------~~~~~~~V~~G~~~~~~~~-----  110 (124)
                      ..||+||..+.+++|||+|+|...  ..++|||+||+++||||||||+..      .....+.|++|.++.....     
T Consensus        28 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~  107 (289)
T 2bdy_A           28 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEK  107 (289)
T ss_dssp             ---CBSCEECCTTSCTTEEEEEETTTTEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCE
T ss_pred             CCeEECCEECCCCCCCCeEEEEECCCCCEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcce
Confidence            468999999999999999999764  458999999999999999999952      2346789999998765322     


Q ss_pred             --CeecEEECCCCC
Q psy12894        111 --ESVPVIIHFSVS  122 (124)
Q Consensus       111 --~~~~vi~Hp~y~  122 (124)
                        ...+|++||+|+
T Consensus       108 ~~~v~~i~~Hp~y~  121 (289)
T 2bdy_A          108 ISMLEKIYIHPRYN  121 (289)
T ss_dssp             EEEEEEEEECTTCB
T ss_pred             eeeeEEEEECCCCC
Confidence              134599999997

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=99.87  E-value=9.1e-22  Score=137.31  Aligned_cols=79  Identities=30%  Similarity=0.472  Sum_probs=66.5

Q ss_pred             CceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCC-CCCceEEEEEceeecCCCCC------eecEEE
Q psy12894         45 QRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKVTLGEHDRLSKNE------SVPVII  117 (124)
Q Consensus        45 ~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~-~~~~~~~V~~G~~~~~~~~~------~~~vi~  117 (124)
                      .||+||.++.+++|||+|++...+.++|+|+||+++||||||||+.. .....+.|++|.+++.....      ..++++
T Consensus         1 ~rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~   80 (240)
T 1mza_A            1 MEIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIP   80 (240)
T ss_dssp             CCCCCCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEE
T ss_pred             CceECCEECCCCCCCeEEEEeeCCceEEEEEEecCCEEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEe
Confidence            37999999999999999999988889999999999999999999864 24567899999988654332      234899


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        81 hp~y~~   86 (240)
T 1mza_A           81 FSRVTS   86 (240)
T ss_dssp             CCCSSC
T ss_pred             CCCccC
Confidence            999973

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=99.87  E-value=5.4e-22  Score=147.93  Aligned_cols=89  Identities=37%  Similarity=0.664  Sum_probs=72.0

Q ss_pred             cCCCCCccC---CCceeCC-EEcCCCCCceEEEEEeC--------CceeEEEEEecCCEEEecccccCCCCC--ceEEEE
Q psy12894         35 NCACGQVER---NQRIVGG-NVTKLHEFPWIAALTKK--------GKFYCGATLIAKRHVLTAAHCIEGVNP--KEIKVT  100 (124)
Q Consensus        35 ~~~cg~~~~---~~ri~gg-~~~~~~~~Pw~v~l~~~--------~~~~CgGsLi~~~~vlTaahC~~~~~~--~~~~V~  100 (124)
                      ...||.+..   ..||+|| .++.+++|||||+|...        ..++|||+||+++||||||||+.....  ..+.|+
T Consensus       115 ~~~CG~~~~~~~~~rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~V~  194 (394)
T 2b9l_A          115 PSFCGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIR  194 (394)
T ss_dssp             CCCTTBCCTTCSSCEEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEE
T ss_pred             CCCCCCCCCCCCCceeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecCCCCCcccEEEE
Confidence            457998654   3599999 89999999999999764        258999999999999999999975433  679999


Q ss_pred             EceeecCCCCC--------eecEEECCCCCC
Q psy12894        101 LGEHDRLSKNE--------SVPVIIHFSVSN  123 (124)
Q Consensus       101 ~G~~~~~~~~~--------~~~vi~Hp~y~~  123 (124)
                      +|.++.....+        ..+|++||+|+.
T Consensus       195 ~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~  225 (394)
T 2b9l_A          195 AGEWDTLTEKERLPYQERKIRQVIIHSNFNP  225 (394)
T ss_dssp             ESCCBTTCCCSSSCCEEEEEEEEEECTTCCT
T ss_pred             eceeeccCCcCCCccEEEEEEEEEECCCCCC
Confidence            99998654432        345999999973

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=99.87  E-value=7.3e-22  Score=136.76  Aligned_cols=77  Identities=30%  Similarity=0.576  Sum_probs=65.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+.......+.|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~   80 (228)
T 2xw9_A            1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPD   80 (228)
T ss_dssp             CBCC-CCCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTT
T ss_pred             CCCCeECCCCCCCcEEEEEECCCeEEEEEEEeCCEEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCC
Confidence            68999999999999999998888999999999999999999997655568999999988654332      335899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        81 y~~   83 (228)
T 2xw9_A           81 SQP   83 (228)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            974

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=99.87  E-value=6.5e-24  Score=156.00  Aligned_cols=95  Identities=27%  Similarity=0.426  Sum_probs=68.5

Q ss_pred             cccCCcCcCCCCCccC----CCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEce
Q psy12894         28 NSSMNHCNCACGQVER----NQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE  103 (124)
Q Consensus        28 ~~~~~~~~~~cg~~~~----~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~  103 (124)
                      ....|.|.+.||+...    ..||+||..+.+++|||||+|...+.++|||+||+++||||||||+.........+..+.
T Consensus        80 ~~~lp~C~p~CG~p~~~~~~~~RIvGG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~  159 (347)
T 4f4o_C           80 GEKLPECEAVCGKPKNPVDQVQRIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLRLGHKNDTKAKDIA  159 (347)
T ss_dssp             BTCCCEEEECCSCCSSCC-----CCSCCBCCSCCCTTCEEEECTTCCEEECCBCSSSEEEECHHHHTTTSCTTCCHHHHG
T ss_pred             CccCCCccCCCCCCCCCCCCCCeEECCEECCCCCCCcEEEEEeCCCEEEEEEEEcCCEEEeCcccccCCCCCcceEEeee
Confidence            4456899999998542    569999999999999999999988889999999999999999999964322222222221


Q ss_pred             ee--cC----CCCCeecEEECCCCC
Q psy12894        104 HD--RL----SKNESVPVIIHFSVS  122 (124)
Q Consensus       104 ~~--~~----~~~~~~~vi~Hp~y~  122 (124)
                      ..  ..    ......+|++||+|+
T Consensus       160 ~~~~~~~~~~~~~~V~~i~~HP~y~  184 (347)
T 4f4o_C          160 PTLRLYVGKKQEVEIEKVIFHPDNS  184 (347)
T ss_dssp             GGCEEEETTTEEECEEEEEECSCTT
T ss_pred             eeeeecCCCeEEEEEEEEEECcCCC
Confidence            11  11    112345699999996

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=99.86  E-value=6.4e-22  Score=136.92  Aligned_cols=77  Identities=34%  Similarity=0.619  Sum_probs=66.5

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC---eecEEECCCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE---SVPVIIHFSVSN  123 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~---~~~vi~Hp~y~~  123 (124)
                      |+||.++.+++|||+|++...+.++|+|+||+++||||||||+.......+.|++|.++......   ..++++||+|+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~   80 (224)
T 1pq7_A            1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSG   80 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBT
T ss_pred             CCCCEECCCCCcCeEEEEEECCCeEEEEEEecCCEEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCC
Confidence            68999999999999999998888999999999999999999998666678999999988654332   345999999974

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=99.86  E-value=6.9e-22  Score=136.66  Aligned_cols=77  Identities=27%  Similarity=0.592  Sum_probs=65.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCC-CceEEEEEceeecCCCCC---eecEEECCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN-PKEIKVTLGEHDRLSKNE---SVPVIIHFSVS  122 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~-~~~~~V~~G~~~~~~~~~---~~~vi~Hp~y~  122 (124)
                      |+||.++.+++|||+|++...+.++|+|+||+++||||||||+.... ...+.|++|.++......   ..++++||+|+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~   80 (222)
T 1eq9_A            1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYD   80 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCB
T ss_pred             CCCCEECCCCCcceEEEEEeCCCeEEEEEEeeCCEEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCC
Confidence            68999999999999999998888999999999999999999997533 567999999987654433   34589999997


Q ss_pred             C
Q psy12894        123 N  123 (124)
Q Consensus       123 ~  123 (124)
                      .
T Consensus        81 ~   81 (222)
T 1eq9_A           81 D   81 (222)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=99.86  E-value=1.5e-21  Score=137.20  Aligned_cols=77  Identities=36%  Similarity=0.587  Sum_probs=65.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCC-CceEEEEEceeecCCCCC------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN-PKEIKVTLGEHDRLSKNE------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~-~~~~~V~~G~~~~~~~~~------~~~vi~Hp  119 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+.... ...+.|++|.++......      ..++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp   80 (254)
T 2bz6_H            1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPS   80 (254)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEET
T ss_pred             CCCCEECCCCCcCCEEEEEeCCCcEEEEEEecCCEEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECC
Confidence            68999999999999999998778999999999999999999997543 356999999988654332      33489999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        81 ~y~~   84 (254)
T 2bz6_H           81 TYVP   84 (254)
T ss_dssp             TCCT
T ss_pred             CCCC
Confidence            9973

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=99.86  E-value=1.5e-21  Score=136.80  Aligned_cols=76  Identities=33%  Similarity=0.515  Sum_probs=62.0

Q ss_pred             CceeCCEEcCCCCCceEEEEEe-CCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEE
Q psy12894         45 QRIVGGNVTKLHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVII  117 (124)
Q Consensus        45 ~ri~gg~~~~~~~~Pw~v~l~~-~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~  117 (124)
                      .||+||..+.+++|||+|++.. .+.++|+|+||+++||||||||+..   ..+.|++|.++......      ..++++
T Consensus        14 ~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~---~~~~v~~G~~~~~~~~~~~~~~~v~~i~~   90 (245)
T 1t8o_A           14 SRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT---TSDVVVAGEFDQGSSSEKIQKLKIAKVFK   90 (245)
T ss_dssp             --CBTCEECCTTSSTTEEEEECTTCCEEEEEEEEETTEEEECGGGCCC---TTSEEEESCSBTTCSSSCCEEEEEEEEEE
T ss_pred             CceECCEECCCCCCCceEEEEcCCCCeEEEEEEeeCCEEEEcHHhCcC---CCcEEEEeeeecCCCCCCcEEEEEEEEEe
Confidence            5899999999999999999987 4568999999999999999999864   45689999987654322      335899


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        91 hp~y~~   96 (245)
T 1t8o_A           91 NSKYNS   96 (245)
T ss_dssp             CTTCCT
T ss_pred             CCCCCC
Confidence            999974

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=99.86  E-value=6.1e-22  Score=144.45  Aligned_cols=91  Identities=27%  Similarity=0.453  Sum_probs=70.7

Q ss_pred             cCCcCcCCCCCcc----CCCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC-----CCceEEEE
Q psy12894         30 SMNHCNCACGQVE----RNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-----NPKEIKVT  100 (124)
Q Consensus        30 ~~~~~~~~cg~~~----~~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~-----~~~~~~V~  100 (124)
                      ..+.|...||...    ...||+||..+.+++|||+|++...  +.|||+||+++||||||||+...     ....+.|+
T Consensus        69 ~~~~c~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~--~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~  146 (329)
T 1md8_A           69 KIPRCLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVF  146 (329)
T ss_dssp             SCCCEEECCSCCSSCCCCC--CBSCCBCCTTSCTTEEEEESS--SEEEEEEETTTEEEECGGGTSCTTC-----CCCCEE
T ss_pred             ccCCCCCCCCCCCCcccccccccCCEECCCCCCCCeEeeccC--CCcceEEecCCEEEecCCEEEeCCcccCCCceEEEE
Confidence            3567888899853    2569999999999999999998653  57999999999999999999632     24567899


Q ss_pred             EceeecC-----CCCCeecEEECCCCC
Q psy12894        101 LGEHDRL-----SKNESVPVIIHFSVS  122 (124)
Q Consensus       101 ~G~~~~~-----~~~~~~~vi~Hp~y~  122 (124)
                      +|.++..     ......+|++||+|+
T Consensus       147 ~G~~~~~~~~~~~~~~V~~i~~Hp~y~  173 (329)
T 1md8_A          147 LGHTNVEELMKLGNHPIRRVSVHPDYR  173 (329)
T ss_dssp             ESCSBHHHHHHHCCCCEEEEEECSSCC
T ss_pred             eccccccccccccceeeEEEEECCCcc
Confidence            9987653     233566799999997

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=99.86  E-value=9.5e-22  Score=146.52  Aligned_cols=92  Identities=29%  Similarity=0.494  Sum_probs=74.8

Q ss_pred             cCCcCcCCCCCccC--CCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC--CCceEEEEEceee
Q psy12894         30 SMNHCNCACGQVER--NQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV--NPKEIKVTLGEHD  105 (124)
Q Consensus        30 ~~~~~~~~cg~~~~--~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~--~~~~~~V~~G~~~  105 (124)
                      ..+.|...||....  ..||+||..+.+++|||+|+|..  .++|||+||+++||||||||+...  ....+.|++|.++
T Consensus       143 ~~p~C~~~CG~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~--~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~V~~G~~~  220 (403)
T 1zjk_A          143 SLPVCEPVCGLSARTTGGQIYGGQKAKPGDFPWQVLILG--GTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLK  220 (403)
T ss_dssp             SCCEEEECCCCCSSCCSCCCSSCEECCTTSSTTEEEEEE--SCCEEEEEETTTEEEECHHHHGGGTTCSTTEEEEESCSB
T ss_pred             cCCCCCCCCCCCCCCCCccccCCcCCCCCCcCCEeEecc--CCceEEEEecCCEEEEcHHhCCCCCCCcceEEEEccccc
Confidence            46778789998653  46999999999999999999987  468999999999999999999753  3567999999986


Q ss_pred             cCCCCC----eecEEECCCCCC
Q psy12894        106 RLSKNE----SVPVIIHFSVSN  123 (124)
Q Consensus       106 ~~~~~~----~~~vi~Hp~y~~  123 (124)
                      ......    ..+|++||+|+.
T Consensus       221 ~~~~~~~~~~v~~i~~Hp~y~~  242 (403)
T 1zjk_A          221 RLSPHYTQAWSEAVFIHEGYTH  242 (403)
T ss_dssp             TTCSCCEEEEEEEEEECTTCCT
T ss_pred             cCCCCceEEeEEEEEECCCCCC
Confidence            433222    335999999974

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=99.86  E-value=1.1e-21  Score=147.26  Aligned_cols=79  Identities=34%  Similarity=0.587  Sum_probs=65.7

Q ss_pred             CCceeCCEEcCCCCCceEEEEEeC--CceeEEEEEecCCEEEecccccCC------CCCceEEEEEceeecCCCCC----
Q psy12894         44 NQRIVGGNVTKLHEFPWIAALTKK--GKFYCGATLIAKRHVLTAAHCIEG------VNPKEIKVTLGEHDRLSKNE----  111 (124)
Q Consensus        44 ~~ri~gg~~~~~~~~Pw~v~l~~~--~~~~CgGsLi~~~~vlTaahC~~~------~~~~~~~V~~G~~~~~~~~~----  111 (124)
                      ..||+||..+.+++|||+|+|...  ..++|||+||+++||||||||+..      .....+.|++|.++......    
T Consensus       163 ~~RIvgG~~a~~g~~Pw~v~l~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~  242 (424)
T 3nxp_A          163 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEK  242 (424)
T ss_dssp             SSCCCCCEECCTTSCTTEEEEEETTTTEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCE
T ss_pred             CCeeECCEECCCCCCCCEEEEeecCCCCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCCcee
Confidence            459999999999999999999865  468999999999999999999952      24567999999988654321    


Q ss_pred             ---eecEEECCCCC
Q psy12894        112 ---SVPVIIHFSVS  122 (124)
Q Consensus       112 ---~~~vi~Hp~y~  122 (124)
                         ..+|++||+|+
T Consensus       243 ~~~V~~ii~Hp~y~  256 (424)
T 3nxp_A          243 ISMLEKIYIHPRYN  256 (424)
T ss_dssp             EECEEEEEECTTCB
T ss_pred             EEEEEEEEeCCCCC
Confidence               34599999997

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=99.85  E-value=2.4e-21  Score=143.32  Aligned_cols=85  Identities=33%  Similarity=0.552  Sum_probs=68.9

Q ss_pred             CCCCcc-CCCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCC--CCCceEEEEEceeecCCCC---
Q psy12894         37 ACGQVE-RNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGEHDRLSKN---  110 (124)
Q Consensus        37 ~cg~~~-~~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~--~~~~~~~V~~G~~~~~~~~---  110 (124)
                      .||.+. ...||+||..+.+++|||+|+|...+.++|||+||+++||||||||+..  .....+.|++|.++.....   
T Consensus       107 ~Cg~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~  186 (372)
T 1z8g_A          107 DCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQ  186 (372)
T ss_dssp             CCSCCCCC---CBSCEECCTTSSTTEEEEEETTEEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEE
T ss_pred             ccCCcCCCCCceECCEECCCCCCCcEEEEEeCCceEEEEEEecCCEEEEChhhcCCCCCccceEEEEEeeEeccCCCCcE
Confidence            578753 3579999999999999999999988889999999999999999999943  2446799999998765433   


Q ss_pred             -CeecEEECCCC
Q psy12894        111 -ESVPVIIHFSV  121 (124)
Q Consensus       111 -~~~~vi~Hp~y  121 (124)
                       ...+|++||+|
T Consensus       187 ~~V~~i~~Hp~y  198 (372)
T 1z8g_A          187 LGVQAVVYHGGY  198 (372)
T ss_dssp             ECEEEEEEETTC
T ss_pred             EEEEEEEECCCc
Confidence             24569999999

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=99.85  E-value=2.5e-21  Score=135.38  Aligned_cols=76  Identities=32%  Similarity=0.525  Sum_probs=64.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC---eecEEECCCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE---SVPVIIHFSVSN  123 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~---~~~vi~Hp~y~~  123 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+.... ..+.|++|.++......   ..++++||+|+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~-~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~   79 (240)
T 2zgc_A            1 IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRM-AQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKP   79 (240)
T ss_dssp             CBTCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGCSCG-GGEEEEESCSBSSSCCEEEEEEEEEECTTCBC
T ss_pred             CCCCEECCCCCcCcEEEEEeCCCeEEEEEEEcCCEEEEcHHhcCCCC-CCEEEEecccccCCCCeEEEEEEEEECCCCCC
Confidence            68999999999999999998778999999999999999999997532 37899999987665432   345999999974

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=99.85  E-value=2.5e-21  Score=136.02  Aligned_cols=78  Identities=35%  Similarity=0.607  Sum_probs=64.1

Q ss_pred             CCceeCCEEcCCCCCceEEEEEeC----CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC-------Ce
Q psy12894         44 NQRIVGGNVTKLHEFPWIAALTKK----GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN-------ES  112 (124)
Q Consensus        44 ~~ri~gg~~~~~~~~Pw~v~l~~~----~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~-------~~  112 (124)
                      ..||+||..+.+++|||+|++...    ..++|+|+||+++||||||||+.  ....+.|++|.++.....       ..
T Consensus        11 ~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~--~~~~~~V~~G~~~~~~~~~~~~~~~~v   88 (251)
T 1pyt_D           11 SARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCIS--NTLTYRVALGKNNLEVEDEAGSLYVGV   88 (251)
T ss_dssp             SSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCC--TTCCEEEEESCSBTTCSCCSSCEEEEE
T ss_pred             CCccCCCEECCCCCCCceEEEEEEcCCCcceEEEeEEecCCEEEECHHHhC--CCceEEEEEcccccccCCCCCcEEEEE
Confidence            468999999999999999999752    24789999999999999999997  356789999998764221       13


Q ss_pred             ecEEECCCCCC
Q psy12894        113 VPVIIHFSVSN  123 (124)
Q Consensus       113 ~~vi~Hp~y~~  123 (124)
                      .++++||+|+.
T Consensus        89 ~~i~~Hp~y~~   99 (251)
T 1pyt_D           89 DTIFVHEKWNS   99 (251)
T ss_dssp             EEEEECTTCBT
T ss_pred             EEEEECCCCCC
Confidence            35899999974

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=99.85  E-value=1.5e-21  Score=135.93  Aligned_cols=77  Identities=31%  Similarity=0.683  Sum_probs=65.6

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC--ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEEC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG--KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIH  118 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~--~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~H  118 (124)
                      |+||..+.+++|||+|++...+  .++|+|+||+++||||||||+.......+.|++|.++......      ..++++|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h   80 (238)
T 1ym0_A            1 IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVN   80 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEEGGGTEEEEEEEEEETTEEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEEC
T ss_pred             CCCCEECCCCccCCEEEEEeCCCCceEEEEEEeeCCEEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEEC
Confidence            6899999999999999998765  6899999999999999999998655678999999988665432      3358999


Q ss_pred             CCCCC
Q psy12894        119 FSVSN  123 (124)
Q Consensus       119 p~y~~  123 (124)
                      |+|+.
T Consensus        81 p~y~~   85 (238)
T 1ym0_A           81 ENYDP   85 (238)
T ss_dssp             TTCCT
T ss_pred             CCCCC
Confidence            99974

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=99.85  E-value=3.4e-21  Score=135.49  Aligned_cols=77  Identities=32%  Similarity=0.571  Sum_probs=65.6

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCC-CCCceEEEEEceeecCCCCC------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG-VNPKEIKVTLGEHDRLSKNE------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~-~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp  119 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+.. .....+.|++|.++......      ..++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp   80 (261)
T 3gyl_B            1 ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHP   80 (261)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECT
T ss_pred             CCCCcCCCCCCCCcEEEEeeCCceEEEEEEEcCCEEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECC
Confidence            689999999999999999998889999999999999999999964 34567999999987665433      33599999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        81 ~y~~   84 (261)
T 3gyl_B           81 SYLQ   84 (261)
T ss_dssp             TCCS
T ss_pred             CcCC
Confidence            9963

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=99.85  E-value=4.7e-21  Score=133.86  Aligned_cols=77  Identities=32%  Similarity=0.668  Sum_probs=64.1

Q ss_pred             eeCCEEcCCCCCceEEEEEe-CCceeEEEEEecCCEEEecccccCC--------------CCCceEEEEEceeecCCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCIEG--------------VNPKEIKVTLGEHDRLSKNE  111 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~-~~~~~CgGsLi~~~~vlTaahC~~~--------------~~~~~~~V~~G~~~~~~~~~  111 (124)
                      |+||..+.+++|||+|++.. .+.++|+|+||+++||||||||+..              .....+.|++|.++......
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~   80 (251)
T 3gov_B            1 IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDE   80 (251)
T ss_dssp             CBTCEECCTTSCTTEEEEEETTCCEEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCS
T ss_pred             CCCCEECCCCCcCeEEEEeccCCCeeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCC
Confidence            68999999999999999987 5678999999999999999999965              24567999999987643322


Q ss_pred             ------eecEEECCCCCC
Q psy12894        112 ------SVPVIIHFSVSN  123 (124)
Q Consensus       112 ------~~~vi~Hp~y~~  123 (124)
                            ..++++||+|+.
T Consensus        81 ~~~~~~v~~i~~hp~y~~   98 (251)
T 3gov_B           81 NEQHLGVKHTTLHPQYDP   98 (251)
T ss_dssp             SCEEECEEEEEECTTCBT
T ss_pred             cceEeeeEEEEECCCCCC
Confidence                  345999999973

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=99.85  E-value=2.9e-21  Score=133.91  Aligned_cols=75  Identities=33%  Similarity=0.599  Sum_probs=64.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+..  ...+.|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~   78 (226)
T 1azz_A            1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDG--AGFVDVVLGAHNIREDEATQVTIQSTDFTVHEN   78 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTTEEEEEEEEETTEEEECHHHHTT--CSCEEEEESCSBSSSCCTTCEEEEECCEEECTT
T ss_pred             CCCCEECCCCCcCCEEEEEECCcEEEEEEEecCCEEEEhHHhcCC--CCceEEEEcceEcCCCCCccEEEEEEEEEECCC
Confidence            689999999999999999987779999999999999999999974  467899999987654321      235899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        79 y~~   81 (226)
T 1azz_A           79 YNS   81 (226)
T ss_dssp             CBT
T ss_pred             CCC
Confidence            974

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=99.85  E-value=3.1e-21  Score=134.23  Aligned_cols=74  Identities=34%  Similarity=0.445  Sum_probs=62.9

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|++...+.++|+|+||+++||||||||+..   ..+.|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~---~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~   77 (234)
T 1orf_A            1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN---KRSQVILGAHSITREEPTKQIMLVKKEFPYPC   77 (234)
T ss_dssp             CBSCEECCTTSSTTEEEEECSSSCEEEEEEEETTEEEECTTCCCC---TTCEEEESCSBSSSCCTTCEEECEEEEEECTT
T ss_pred             CCCCEECCCCCCCeEEEEccCCceEEEEEEeeCCEEEEchhcCCC---CCceEEEeccccCcCCCceEEEEEEEEEcCCC
Confidence            689999999999999999887789999999999999999999864   45789999987654332      345999999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        78 y~~   80 (234)
T 1orf_A           78 YDP   80 (234)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            973

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=99.84  E-value=4.3e-21  Score=132.80  Aligned_cols=73  Identities=34%  Similarity=0.563  Sum_probs=62.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+.    ..+.|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~   76 (223)
T 1lo6_A            1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCKK----PNLQVFLGKHNLRQRESSQEQSSVVRAVIHPD   76 (223)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCC----TTCEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCCEEEEecCCCEEEEeEEecCCEEEECccCCC----CCeEEEEcceecCCCCCCcEEEEEEEEEECCC
Confidence            68999999999999999988778999999999999999999985    35789999987654322      335899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        77 y~~   79 (223)
T 1lo6_A           77 YDA   79 (223)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            974

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=99.84  E-value=5e-21  Score=142.33  Aligned_cols=90  Identities=27%  Similarity=0.442  Sum_probs=71.9

Q ss_pred             CCcCcCCCCCccC----CCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCC-----CceEEEEE
Q psy12894         31 MNHCNCACGQVER----NQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN-----PKEIKVTL  101 (124)
Q Consensus        31 ~~~~~~~cg~~~~----~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~-----~~~~~V~~  101 (124)
                      .+.|...||....    ..||+||..+.+++|||+|++...  +.|||+||+++||||||||+....     ...+.|++
T Consensus       138 ~p~C~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~--~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~  215 (399)
T 1gpz_A          138 IPRCLPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL  215 (399)
T ss_dssp             CCEEEECCSCCSSCCCSSCCCCSCEECCTTSSTTEEEEESS--SEEEEEEETTTEEEECGGGTSCTTC-----CCCEEEE
T ss_pred             cCCccCCCCCcCCcccCCCEEECCEECCCCCCCCEEEECCC--CCeEEEEeCCCEEEeChhcccccccccCCcceEEEEe
Confidence            5678888998632    469999999999999999998643  479999999999999999997421     34578999


Q ss_pred             ceeecC-----CCCCeecEEECCCCC
Q psy12894        102 GEHDRL-----SKNESVPVIIHFSVS  122 (124)
Q Consensus       102 G~~~~~-----~~~~~~~vi~Hp~y~  122 (124)
                      |.++..     ......+|++||+|+
T Consensus       216 G~~~~~~~~~~~~~~v~~i~~Hp~y~  241 (399)
T 1gpz_A          216 GHTNVEELMKLGNHPIRRVSVHPDYR  241 (399)
T ss_dssp             SCSBHHHHHHTCCCCEEEEEECSSCC
T ss_pred             ccccccccccccccceEEEEECCCCC
Confidence            987653     233466799999996

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=99.84  E-value=5.9e-21  Score=132.96  Aligned_cols=72  Identities=36%  Similarity=0.614  Sum_probs=62.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|++...+.++|+|+||+++||||||||+.    ..+.|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~   76 (238)
T 1spj_A            1 IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCIS----DNYQLWLGRHNLFDDENTAQFVHVSESFPHPG   76 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC----SSEEEEESCSBTTSCCTTCEEECEEEEEECTT
T ss_pred             CCCCEECCCCCCCcEEEEEeCCCeeEEEEEecCCEEEEcHHhCC----CCceEEEEeccccCCCCCceEEEEEEEEcCCC
Confidence            68999999999999999998888999999999999999999986    35789999987654322      335899999


Q ss_pred             CC
Q psy12894        121 VS  122 (124)
Q Consensus       121 y~  122 (124)
                      |+
T Consensus        77 y~   78 (238)
T 1spj_A           77 FN   78 (238)
T ss_dssp             SC
T ss_pred             cc
Confidence            97

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=99.84  E-value=5.7e-21  Score=133.06  Aligned_cols=72  Identities=28%  Similarity=0.480  Sum_probs=62.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC------CeecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN------ESVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~------~~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+.    ..+.|++|.++.....      ...++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~   76 (237)
T 1ao5_A            1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYV----DQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPG   76 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECTTCCC----SSCEEEESCCBSSSCCSSCEECCEEEEEECTT
T ss_pred             CCCCeECCCCCcCCEEEEeeCCCeEEEEEEeeCCEEEECHHHCC----CCCEEEecccccccCCCCcEEEEEEEEEcCCC
Confidence            68999999999999999998888999999999999999999995    4578999998764322      2345999999


Q ss_pred             CC
Q psy12894        121 VS  122 (124)
Q Consensus       121 y~  122 (124)
                      |+
T Consensus        77 y~   78 (237)
T 1ao5_A           77 FN   78 (237)
T ss_dssp             SC
T ss_pred             cC
Confidence            97

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=99.84  E-value=5.9e-21  Score=133.28  Aligned_cols=75  Identities=31%  Similarity=0.573  Sum_probs=62.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-C---ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-G---KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~---~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||.++.+++|||+|++... +   .++|+|+||+++||||||||+..  ...+.|++|.++......      ..+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~~~v~~G~~~~~~~~~~~~~~~v~~i~   78 (240)
T 1gvk_B            1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR--ELTFRVVVGEHNLNQNNGTEQYVGVQKIV   78 (240)
T ss_dssp             CBTCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCS--CCCEEEEESCSBTTSCCSCCEEEEEEEEE
T ss_pred             CCCCeECCCCCcCEEEEEEecCCCccCceEEEEEeeCCEEEECHHHCCC--CcceEEEECCeecccCCCcceEEEEEEEE
Confidence            689999999999999999852 3   48999999999999999999974  367899999988754332      33599


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        79 ~Hp~y~~   85 (240)
T 1gvk_B           79 VHPYWNT   85 (240)
T ss_dssp             ECTTCCT
T ss_pred             ECCCCCC
Confidence            9999974

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=99.84  E-value=1.6e-21  Score=142.18  Aligned_cols=89  Identities=30%  Similarity=0.544  Sum_probs=68.5

Q ss_pred             ccCCcCcCCCCCccC----CCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEcee
Q psy12894         29 SSMNHCNCACGQVER----NQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH  104 (124)
Q Consensus        29 ~~~~~~~~~cg~~~~----~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~  104 (124)
                      ...+.|...||....    ..||+||..+.+++|||+|++.   .++|||+||+++||||||||+....  ...|++|.+
T Consensus        61 ~~~~~c~~~CG~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~---~~~CgGsLIs~~~VLTAAHC~~~~~--~~~v~~G~~  135 (333)
T 1elv_A           61 PELPKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFD---NPWAGGALINEYWVLTAAHVVEGNR--EPTMYVGST  135 (333)
T ss_dssp             TSCCCEEECCSCCSSCC-----CBTCEECCGGGSTTEEEEE---TTEEEEEEEETTEEEECHHHHTTCS--SCCEECSCS
T ss_pred             cccccccCCcCCCCCcccccceeecCcccCCCCcCeEEEec---CCceeEEEecCCEEEehhheeCCCC--CCeEEEeee
Confidence            356788889998653    4699999999999999999994   2379999999999999999997532  347899988


Q ss_pred             ecCCC----CCe---ecEEECCCCC
Q psy12894        105 DRLSK----NES---VPVIIHFSVS  122 (124)
Q Consensus       105 ~~~~~----~~~---~~vi~Hp~y~  122 (124)
                      +....    ...   .++++||+|+
T Consensus       136 ~~~~~~~~~~~v~~v~~i~~Hp~y~  160 (333)
T 1elv_A          136 SVQTSRLAKSKMLTPEHVFIHPGWK  160 (333)
T ss_dssp             BCC-------CEECEEEEEECTTSC
T ss_pred             ecccCccceeeeeccceEEECCCCc
Confidence            75321    224   6699999997

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=99.84  E-value=4.7e-21  Score=133.21  Aligned_cols=75  Identities=32%  Similarity=0.665  Sum_probs=63.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++.....++|+|+||+++||||||||+..  ...+.|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~--~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~   78 (235)
T 2wph_S            1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVET--GVKITVVAGEHNIEETEHTEQKRNVIRIIPHHN   78 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEESSSTTCEEEEEEETTEEEECGGGCCT--TSCCEEEESCCBTTSCCSCCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCeEEEEccCCCeeEEEEEEeCCEEEECHHHCcC--CCCEEEEEcccccCCCCCCcEEeeeEEEEeCCC
Confidence            689999999999999999877778999999999999999999974  346889999988654332      335899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        79 y~~   81 (235)
T 2wph_S           79 FNA   81 (235)
T ss_dssp             TTS
T ss_pred             Ccc
Confidence            974

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=99.84  E-value=5.4e-21  Score=133.30  Aligned_cols=77  Identities=34%  Similarity=0.615  Sum_probs=63.5

Q ss_pred             eeCCEEcCCCCCceEEEEEe---CCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCC------CeecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTK---KGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKN------ESVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~---~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~------~~~~vi  116 (124)
                      |+||..+.+++|||+|++..   ...++|+|+||+++||||||||+... .+..+.|++|.++.....      ...+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~   80 (238)
T 3bg8_A            1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEII   80 (238)
T ss_dssp             CBSCEECCTTSSTTEEEEEECSSSCEEEEEEEEEETTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEE
T ss_pred             CCCCeECCCCCcCcEEEEEeecCCCcEEEEEEEeeCCEEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEE
Confidence            68999999999999999987   35689999999999999999999753 346789999988764322      234599


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        81 ~Hp~y~~   87 (238)
T 3bg8_A           81 IHDQYKM   87 (238)
T ss_dssp             ECTTCCC
T ss_pred             ECCCCCC
Confidence            9999974

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=99.84  E-value=6.2e-21  Score=132.86  Aligned_cols=73  Identities=30%  Similarity=0.596  Sum_probs=62.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+.    ..+.|++|.+++.....      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~   76 (237)
T 1gvz_A            1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMS----DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQ   76 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC----SSCEEEESCSBTTSCCTTCEEECEEEEEECTT
T ss_pred             CCCCEECCCCCCCeEEEEeeCCceEEEeEEeeCCEEEEcHHhCC----CCCeEEEeecccccCCCCceEEEeeeEecCCc
Confidence            68999999999999999988778899999999999999999985    46789999988654322      335999999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        77 y~~   79 (237)
T 1gvz_A           77 FDL   79 (237)
T ss_dssp             SCG
T ss_pred             cCc
Confidence            973

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=99.84  E-value=7.6e-21  Score=133.50  Aligned_cols=75  Identities=36%  Similarity=0.589  Sum_probs=62.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp  119 (124)
                      |+||..+.+++|||+|++... ..++|+|+||+++||||||||+..  ...+.|++|.++......      ..++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp   78 (250)
T 1aut_C            1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDE--SKKLLVRLGEYDLRRWEKWELDLDIKEVFVHP   78 (250)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTSCEEEEEEEEETTEEEECGGGSSS--CSCCEEEESCCBTTCCCTTCEEEEEEEEEECT
T ss_pred             CCCCEECCCCCCCCEEEEecCCCceEEEEEEeeCCEEEEChHHcCC--CCceEEEEcccccCCCCCccEEEEEEEEEECC
Confidence            689999999999999999864 458999999999999999999974  356789999988654322      34599999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        79 ~y~~   82 (250)
T 1aut_C           79 NYSK   82 (250)
T ss_dssp             TCBT
T ss_pred             CCCC
Confidence            9974

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=99.84  E-value=1.1e-20  Score=131.69  Aligned_cols=77  Identities=31%  Similarity=0.615  Sum_probs=62.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeC--Cc--eeEEEEEecCCEEEecccccCCC---CCceEEEEEceeecCCCCC------ee
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK--GK--FYCGATLIAKRHVLTAAHCIEGV---NPKEIKVTLGEHDRLSKNE------SV  113 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~--~~--~~CgGsLi~~~~vlTaahC~~~~---~~~~~~V~~G~~~~~~~~~------~~  113 (124)
                      |+||..+.+++|||+|++...  ..  ++|+|+||+++||||||||+...   .+..+.|++|.++......      ..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~   80 (237)
T 2f91_A            1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVS   80 (237)
T ss_dssp             CBSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEE
T ss_pred             CCCccCCCCCCCCcEEEEEEecCCCCcceEEEEEeeCCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEE
Confidence            689999999999999999763  22  34999999999999999999753   4567999999987653222      33


Q ss_pred             cEEECCCCCC
Q psy12894        114 PVIIHFSVSN  123 (124)
Q Consensus       114 ~vi~Hp~y~~  123 (124)
                      ++++||+|+.
T Consensus        81 ~i~~Hp~y~~   90 (237)
T 2f91_A           81 KIILHENFDY   90 (237)
T ss_dssp             EEEECTTCCT
T ss_pred             EEEECCCCCC
Confidence            5999999973

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=99.84  E-value=7.3e-21  Score=131.99  Aligned_cols=75  Identities=35%  Similarity=0.578  Sum_probs=62.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp  119 (124)
                      |+||..+.+++|||+|++... +.++|+|+||+++||||||||+..  ...+.|++|.++......      ..++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp   78 (228)
T 1fxy_A            1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQ--AKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHN   78 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGTTS--CSSCEEEEECSCTTTCCCCEEEEEEEEEEECT
T ss_pred             CCCCEECCCCCcCcEEEEEcCCCCeeEEEEEeeCCEEEECHHHCCC--CCcEEEEECccCccccCCCcEEEEEEEEEECC
Confidence            689999999999999999875 568999999999999999999963  367899999987654332      23489999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        79 ~y~~   82 (228)
T 1fxy_A           79 RFTK   82 (228)
T ss_dssp             TCBT
T ss_pred             CCCC
Confidence            9974

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=99.84  E-value=9.8e-21  Score=131.47  Aligned_cols=77  Identities=35%  Similarity=0.573  Sum_probs=63.9

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCC--CeecEEECCCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKN--ESVPVIIHFSVSN  123 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~--~~~~vi~Hp~y~~  123 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+... ....+.|++|........  ...++++||+|+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~   80 (232)
T 2oq5_A            1 IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKH   80 (232)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCT
T ss_pred             CCCCEECCCCCCCeeEEEEeCCCeeEEEEEEcCCEEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCC
Confidence            6899999999999999999888899999999999999999999763 346789999987532211  2345999999974

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=99.84  E-value=1.5e-20  Score=131.31  Aligned_cols=75  Identities=32%  Similarity=0.680  Sum_probs=62.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeC--C--ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK--G--KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~--~--~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||..+.+++|||+|++...  +  .++|+|+||+++||||||||+.  ....+.|++|.++......      ..+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~--~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~   78 (241)
T 1bru_P            1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS--SSRTYRVVLGRHSLSTNEPGSLAVKVSKLV   78 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCC--TTSCEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred             CCCCeECCCCCcCcEEEEEEecCCceeeEEEeEEeeCCEEEEcHHhcc--cCCceEEEEEcccccCCCCccEEEEEEEEE
Confidence            689999999999999999863  3  3799999999999999999997  3467899999987654321      33589


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        79 ~Hp~y~~   85 (241)
T 1bru_P           79 VHQDWNS   85 (241)
T ss_dssp             ECTTCCT
T ss_pred             ECCCCCC
Confidence            9999974

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=99.83  E-value=9.9e-21  Score=131.09  Aligned_cols=71  Identities=37%  Similarity=0.620  Sum_probs=60.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC------CeecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN------ESVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~------~~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|++...+.++|+|+||+++||||||||+.    ..+.|++|.++.....      ...++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~   76 (225)
T 1npm_A            1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKK----QKYSVRLGDHSLQSRDQPEQEIQVAQSIQHPC   76 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC----SSCEEEESCSBTTC--CCCEEECEEEEEECTT
T ss_pred             CCCCEECCCCCcCcEEEEeeCCceEEEEEEECCCEEEEhHHcCC----CCceEEEeeeEcCCCCCCcEEEEEEEEEECCC
Confidence            68999999999999999988778999999999999999999985    4578999998765332      2345899999


Q ss_pred             C
Q psy12894        121 V  121 (124)
Q Consensus       121 y  121 (124)
                      |
T Consensus        77 y   77 (225)
T 1npm_A           77 Y   77 (225)
T ss_dssp             C
T ss_pred             C
Confidence            9

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=99.83  E-value=8.9e-21  Score=132.35  Aligned_cols=75  Identities=35%  Similarity=0.585  Sum_probs=62.0

Q ss_pred             eeCCEEcCCCCCceEEEEEe-CCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~-~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp  119 (124)
                      |+||..+.+++|||+|++.. .+.++|+|+||+++||||||||+..  ...+.|++|.++......      ..++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAhC~~~--~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp   78 (241)
T 2jkh_A            1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQ--AKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHN   78 (241)
T ss_dssp             CBSSEECCTTSSTTEEEEECTTSCEEEEEEECSSSEEEECGGGGGS--CSSCEEEESCSBTTCCCSCCEEECEEEEEECT
T ss_pred             CCCCEECCCCCcCcEEEEEcCCCCcEEEEEEeeCCEEEEcHHHcCC--CCcEEEEECCccCCCCCCCcEEEEeEEEEeCC
Confidence            68999999999999999975 4568999999999999999999974  346889999987654322      33489999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        79 ~y~~   82 (241)
T 2jkh_A           79 RFTK   82 (241)
T ss_dssp             TCBT
T ss_pred             CCCC
Confidence            9974

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=99.83  E-value=8.7e-21  Score=132.10  Aligned_cols=73  Identities=32%  Similarity=0.551  Sum_probs=61.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|++...+.++|+|+||+++||||||||+..    ...|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~   76 (237)
T 2zch_P            1 IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRN----KSVILLGRHSLFHPEDTGQVFQVSHSFPHPL   76 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEESSSSEEEEEEEEETTEEEECGGGCCS----SCEEEESCSBSSSCCTTCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEcHHhcCC----CceEEEecccccCCCCCcEEEEEEEEecCCC
Confidence            689999999999999999887789999999999999999999964    2468999887654322      335899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        77 y~~   79 (237)
T 2zch_P           77 YDM   79 (237)
T ss_dssp             SCG
T ss_pred             cch
Confidence            973

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=99.83  E-value=1.7e-20  Score=130.51  Aligned_cols=77  Identities=31%  Similarity=0.573  Sum_probs=63.6

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC-ceeEEEEEecCCEEEecccccCCC------CCceEEEEEceeecCCCCC-------e
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG-KFYCGATLIAKRHVLTAAHCIEGV------NPKEIKVTLGEHDRLSKNE-------S  112 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~-~~~CgGsLi~~~~vlTaahC~~~~------~~~~~~V~~G~~~~~~~~~-------~  112 (124)
                      |+||.++.+++|||+|++...+ .++|+|+||+++||||||||+...      ....+.|++|.++......       .
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v   80 (241)
T 3ncl_A            1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRL   80 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEE
T ss_pred             CCCCeECCCCCCCcEEEEEcCCCceEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEE
Confidence            6899999999999999998754 489999999999999999999652      3467999999987654321       3


Q ss_pred             ecEEECCCCCC
Q psy12894        113 VPVIIHFSVSN  123 (124)
Q Consensus       113 ~~vi~Hp~y~~  123 (124)
                      .++++||+|+.
T Consensus        81 ~~i~~hp~y~~   91 (241)
T 3ncl_A           81 KRIISHPFFND   91 (241)
T ss_dssp             EEEEECTTCCT
T ss_pred             EEEEECCCCCC
Confidence            35999999973

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=99.83  E-value=9e-21  Score=132.34  Aligned_cols=77  Identities=31%  Similarity=0.560  Sum_probs=63.2

Q ss_pred             eeCCEEcCCCCCceEEEEEe---CCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCC------CeecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTK---KGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKN------ESVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~---~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~------~~~~vi  116 (124)
                      |+||.++.+++|||+|++..   ...++|+|+||+++||||||||+... ....+.|++|.++.....      ...+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~   80 (241)
T 2any_A            1 IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEII   80 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEEcCCCceEEEEEEecCCEEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEE
Confidence            68999999999999999976   34589999999999999999999754 236789999988764321      245699


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        81 ~Hp~y~~   87 (241)
T 2any_A           81 IHQNYKV   87 (241)
T ss_dssp             ECTTCCT
T ss_pred             ECCCCCC
Confidence            9999974

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=99.83  E-value=4.2e-21  Score=134.03  Aligned_cols=74  Identities=30%  Similarity=0.481  Sum_probs=48.7

Q ss_pred             CceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEEC
Q psy12894         45 QRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIH  118 (124)
Q Consensus        45 ~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~H  118 (124)
                      .||+||..+.+++|||+|++...+.++|+|+||+++||||||||+.    ..+.|++|.++......      ..++++|
T Consensus         2 arIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~~H   77 (240)
T 1sgf_A            2 APPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYN----DKYQVWLGKNNFLEDEPSDQHRLVSKAIPH   77 (240)
T ss_dssp             -----------CCCTTEEEEECTTSCCEEEEECSSSEEEECGGGCC----SCCEEEECC----C-CTTCEEEEEEEEEEC
T ss_pred             CcccCCeECCCCCcCCEEEEEeCCCeEEEEEEecCCEEEECHHhCC----CCceEEeCCcccccCCCCceEEEEEEEEcC
Confidence            5899999999999999999954467899999999999999999986    35789999987643221      3358999


Q ss_pred             CCCC
Q psy12894        119 FSVS  122 (124)
Q Consensus       119 p~y~  122 (124)
                      |+|+
T Consensus        78 p~y~   81 (240)
T 1sgf_A           78 PDFN   81 (240)
T ss_dssp             TTSC
T ss_pred             CCCc
Confidence            9997

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=99.83  E-value=1.5e-20  Score=131.56  Aligned_cols=76  Identities=26%  Similarity=0.421  Sum_probs=63.9

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCC-CceEEEEEceeecCCCCC------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN-PKEIKVTLGEHDRLSKNE------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~-~~~~~V~~G~~~~~~~~~------~~~vi~Hp  119 (124)
                      |+||..+.+++|||+|++... .++|+|+||+++||||||||+.... ...+.|++|.++......      ..++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~-~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp   79 (248)
T 2r0l_A            1 IIGGSSSLPGSHPWLAAIYIG-DSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYT   79 (248)
T ss_dssp             CBSCEECCTTSSTTEEEEEET-TEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECT
T ss_pred             CCCCccCCCCCCCeEEEEEcC-CceEEEEEEcCCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCC
Confidence            689999999999999999875 6899999999999999999997543 467999999988664432      34599999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        80 ~y~~   83 (248)
T 2r0l_A           80 LYSV   83 (248)
T ss_dssp             TCCT
T ss_pred             ccCc
Confidence            9974

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=99.83  E-value=1.5e-20  Score=131.55  Aligned_cols=77  Identities=30%  Similarity=0.562  Sum_probs=63.6

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-C--ceeEEEEEecCCEEEecccccCC--CCCceEEEEEceeecCCCC---CeecEEEC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-G--KFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGEHDRLSKN---ESVPVIIH  118 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~--~~~CgGsLi~~~~vlTaahC~~~--~~~~~~~V~~G~~~~~~~~---~~~~vi~H  118 (124)
                      |+||.++.+++|||+|+|... +  .++|+|+||+++||||||||+..  .....+.|++|.++.....   ...++++|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~H   80 (245)
T 2f9n_A            1 IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVH   80 (245)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEEC
T ss_pred             CCCCeECCCCCCCcEEEEEEcCCCcceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEEC
Confidence            689999999999999999873 3  57999999999999999999964  2446789999998765433   34569999


Q ss_pred             CCCCC
Q psy12894        119 FSVSN  123 (124)
Q Consensus       119 p~y~~  123 (124)
                      |+|+.
T Consensus        81 p~y~~   85 (245)
T 2f9n_A           81 PQFYI   85 (245)
T ss_dssp             TTCCS
T ss_pred             CCccC
Confidence            99973

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=99.83  E-value=9.1e-21  Score=131.57  Aligned_cols=77  Identities=29%  Similarity=0.585  Sum_probs=64.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC--CCceEEEEEceeecCCCCC-------eecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV--NPKEIKVTLGEHDRLSKNE-------SVPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~--~~~~~~V~~G~~~~~~~~~-------~~~vi~  117 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+...  ....+.|++|.++......       ..++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~   80 (235)
T 4dgj_A            1 IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVI   80 (235)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEE
T ss_pred             CCCCccCCCCCCCcEEEEeeCCCeEEEEEEeeCCEEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEE
Confidence            6899999999999999999988899999999999999999999643  4567899999876543221       335999


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        81 hp~y~~   86 (235)
T 4dgj_A           81 NPHYNR   86 (235)
T ss_dssp             CTTCBT
T ss_pred             CCCCCC
Confidence            999973

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.83  E-value=1.3e-20  Score=130.48  Aligned_cols=72  Identities=33%  Similarity=0.596  Sum_probs=60.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++ ..+.++|+|+||+++||||||||+.    ..+.|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l-~~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~   75 (223)
T 3mfj_A            1 IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYK----SGIQVRLGEDNINVVEGNEQFISASKSIVHPS   75 (223)
T ss_dssp             CBSCEECCTTSSTTEEEE-ESSSEEEEEEEEETTEEEECGGGCC----SSCEEEESCSSTTSCCSCCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCcCCEEEEE-EcCCeEEEEEEecCCEEEEhHHhcC----CCcEEEECCceecccCCCcEEEEeeEEEECCC
Confidence            689999999999999999 4567899999999999999999984    45789999987643221      235899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        76 y~~   78 (223)
T 3mfj_A           76 YNS   78 (223)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            974

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=99.83  E-value=8.7e-21  Score=132.33  Aligned_cols=75  Identities=28%  Similarity=0.605  Sum_probs=63.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC---ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC-----eecEEEC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE-----SVPVIIH  118 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~---~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~-----~~~vi~H  118 (124)
                      |+||..+.+++|||+|++....   .++|+|+||+++||||||||+.......+.|++|.++......     ..++++|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~h   80 (241)
T 1m9u_A            1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMH   80 (241)
T ss_dssp             CBTCEECCTTSSTTEEEEEEESSSEEEEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEEC
T ss_pred             CCCCeECCCCCcCeEEEEEecCCceeeeeEEEEEeCCEEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeC
Confidence            6899999999999999998743   3899999999999999999997655678999999987654322     3359999


Q ss_pred             CCC
Q psy12894        119 FSV  121 (124)
Q Consensus       119 p~y  121 (124)
                      |+|
T Consensus        81 p~y   83 (241)
T 1m9u_A           81 ENY   83 (241)
T ss_dssp             TTT
T ss_pred             CCc
Confidence            999

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=99.83  E-value=1.7e-20  Score=129.77  Aligned_cols=73  Identities=34%  Similarity=0.576  Sum_probs=60.9

Q ss_pred             eeCCEEcCCCCCceEEEEEeC--C-ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK--G-KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~--~-~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~  117 (124)
                      |+||..+.+++|||++++...  + .++|+|+||+++||||||||+..    .+.|++|.++......      ..++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~v~~i~~   76 (224)
T 1cgh_A            1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGS----NINVTLGAHNIQRRENTQQHITARRAIR   76 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEESTTTTSCEEEEEEEETTEEEECGGGCCS----SEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEECCCCCeEEEEEEeeCCEEEEhHHhCCC----CCEEEEeecccCCCCCccEEEEEEEEEc
Confidence            689999999999999999873  3 48999999999999999999863    5899999988654322      335899


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        77 Hp~y~~   82 (224)
T 1cgh_A           77 HPQYNQ   82 (224)
T ss_dssp             CTTCBT
T ss_pred             CCCCCC
Confidence            999973

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=99.83  E-value=2.1e-20  Score=129.47  Aligned_cols=73  Identities=37%  Similarity=0.513  Sum_probs=60.8

Q ss_pred             eeCCEEcCCCCCceEEEEEe--CC-ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTK--KG-KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~--~~-~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~  117 (124)
                      |+||.++.+++|||+|++..  .+ .++|+|+||+++||||||||+.    ..+.|++|.++......      ..++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~   76 (227)
T 1iau_A            1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCWG----SSINVTLGAHNIKEQEPTQQFIPVKRPIP   76 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEECSSCEEEEEEEEEETTEEEECGGGCC----SEEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred             CCCCeECCCCCcCcEEEEEEECCCCceEEEEEEEcCCEEEECHHhCC----CceEEEEccccccCCCCccEEEEEEEEEC
Confidence            68999999999999999975  33 4899999999999999999986    35899999988654321      335899


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        77 Hp~y~~   82 (227)
T 1iau_A           77 HPAYNP   82 (227)
T ss_dssp             CTTCCT
T ss_pred             CCCCCC
Confidence            999973

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=99.83  E-value=8.6e-21  Score=130.73  Aligned_cols=76  Identities=34%  Similarity=0.697  Sum_probs=65.2

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+.......+.|++|.++......      ..+++.| +
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h-~   79 (218)
T 2z7f_E            1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFEN-G   79 (218)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEES-C
T ss_pred             CCCCEECCCCccCcEEEEEeCCCcEEEEEEccCCEEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEcc-C
Confidence            68999999999999999998888999999999999999999998665677999999988654432      2348999 9


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        80 y~~   82 (218)
T 2z7f_E           80 YDP   82 (218)
T ss_dssp             CBT
T ss_pred             CCC
Confidence            973

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=99.83  E-value=8.9e-21  Score=132.95  Aligned_cols=77  Identities=32%  Similarity=0.615  Sum_probs=62.9

Q ss_pred             eeCCEEcCCCCCceEEEEEe------CCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCCC------ee
Q psy12894         47 IVGGNVTKLHEFPWIAALTK------KGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKNE------SV  113 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~------~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~~------~~  113 (124)
                      |+||..+.+++|||+|+|..      ...++|+|+||+++||||||||+... ....+.|++|.++......      ..
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~   80 (252)
T 1rtf_B            1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVE   80 (252)
T ss_dssp             CBSSEECCGGGSTTEEEEEEEC----CEEEEEEEEECSSSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEE
T ss_pred             CCCCeECCCCCcCCEEEEEEecCCCCCCCEEEEEEEEeCCEEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEE
Confidence            68999999999999999974      23579999999999999999999753 4567999999887653321      33


Q ss_pred             cEEECCCCCC
Q psy12894        114 PVIIHFSVSN  123 (124)
Q Consensus       114 ~vi~Hp~y~~  123 (124)
                      ++++||+|+.
T Consensus        81 ~i~~Hp~y~~   90 (252)
T 1rtf_B           81 KYIVHKEFDD   90 (252)
T ss_dssp             EEEECTTCCT
T ss_pred             EEEeCCCCCc
Confidence            5899999974

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=99.83  E-value=1.9e-20  Score=129.76  Aligned_cols=73  Identities=38%  Similarity=0.638  Sum_probs=60.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeC--C-ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK--G-KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~--~-~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~  117 (124)
                      |+||.++.+++|||+|++...  + .++|+|+||+++||||||||+.    ..+.|++|.++......      ..++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~   76 (227)
T 1euf_A            1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLG----SSINVTLGAHNIMERERTQQVIPVRRPIP   76 (227)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESSSSEEEEEEEEEETTEEEECGGGCC----EEEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred             CCCCeECCCCCcCCEEEEEEeCCCCceEEEEEEeeCCEEEECHHHCC----CCcEEEEcccccCCCCCccEEEEEEEEEe
Confidence            689999999999999999763  2 5899999999999999999986    36889999988654321      334899


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        77 Hp~y~~   82 (227)
T 1euf_A           77 HPDYND   82 (227)
T ss_dssp             CTTCCT
T ss_pred             CCCCCC
Confidence            999973

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=99.83  E-value=1.1e-20  Score=131.14  Aligned_cols=75  Identities=29%  Similarity=0.515  Sum_probs=63.0

Q ss_pred             eeCCEEcCCCCCceEEEEEe----CCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC---eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTK----KGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE---SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~----~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~---~~~vi~Hp  119 (124)
                      |+||..+.+++|||+|++..    ...++|+|+||+++||||||||+..  ...+.|++|.++......   ..++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~--~~~~~v~~G~~~~~~~~~~~~v~~i~~hp   78 (230)
T 2hlc_A            1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD--AVSVVVYLGSAVQYEGEAVVNSERIISHS   78 (230)
T ss_dssp             CBTCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTT--EEEEEEEESCSBTTCCSEEEECSEEEECT
T ss_pred             CCCCeECCCCCCCcEEEEEEEecCCCCEEEEEEEeeCCEEEECHHHCCC--CcceEEEEeeeecCCCCeEEEEEEEEECC
Confidence            68999999999999999986    4568999999999999999999974  467899999987655332   23499999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        79 ~y~~   82 (230)
T 2hlc_A           79 MFNP   82 (230)
T ss_dssp             TCBT
T ss_pred             CCCC
Confidence            9974

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=99.83  E-value=1.2e-20  Score=130.56  Aligned_cols=73  Identities=29%  Similarity=0.550  Sum_probs=61.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCC---C----CeecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSK---N----ESVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~---~----~~~~vi~Hp  119 (124)
                      |+||.++.+++|||+|++...+.++|+|+||+++||||||||+.    ..+.|++|.++....   .    ...++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp   76 (223)
T 2bdg_A            1 IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQ----NSYTIGLGLHSLEADQEPGSQMVEASLSVRHP   76 (223)
T ss_dssp             CBTCEECCTTSSTTEEEEECSSCEEEEEEEEETTEEEECGGGCC----SSEEEEESCSBSCGGGCTTCEEEEEEEEEECT
T ss_pred             CCCCEECCCCCCCcEEEEeeCCCEEEEEEEecCCEEEEhHHhCC----CCeEEEEeeeecCCCCCCCcEEEEEEEEEeCC
Confidence            68999999999999999988778999999999999999999985    357899998775421   1    123489999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        77 ~y~~   80 (223)
T 2bdg_A           77 EYNR   80 (223)
T ss_dssp             TTTS
T ss_pred             CCCC
Confidence            9974

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=99.83  E-value=1.6e-20  Score=130.69  Aligned_cols=75  Identities=33%  Similarity=0.658  Sum_probs=62.4

Q ss_pred             eeCCEEcCCCCCceEEEEEe--CCc--eeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC------CeecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTK--KGK--FYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN------ESVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~--~~~--~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~------~~~~vi  116 (124)
                      |+||..+.+++|||+|++..  .+.  ++|+|+||+++||||||||+..  ...+.|++|.++.....      ...+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~~~~~~~~~v~~i~   78 (236)
T 1elt_A            1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS--ARTWRVVLGEHNLNTNEGKEQIMTVNSVF   78 (236)
T ss_dssp             CBSSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSS--CCCEEEEESCSBTTSCCSCCEEECEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEecCCceeeEEEEEEEeCCEEEECHHhhCC--cCceEEEEccccCCCCCCCcEEEEEEEEE
Confidence            68999999999999999986  333  7899999999999999999974  36789999998875433      234599


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        79 ~hp~y~~   85 (236)
T 1elt_A           79 IHSGWNS   85 (236)
T ss_dssp             ECTTCCT
T ss_pred             ECCCCCC
Confidence            9999974

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=99.83  E-value=9.5e-21  Score=132.16  Aligned_cols=76  Identities=30%  Similarity=0.595  Sum_probs=63.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC-----ceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCCC------eec
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG-----KFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKNE------SVP  114 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~-----~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~~------~~~  114 (124)
                      |+||..+.+++|||+|++....     .++|+|+||+++||||||||+... ....+.|++|.++......      ..+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~   80 (247)
T 3mhw_U            1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN   80 (247)
T ss_dssp             CBSSEECCGGGSTTEEEEEEECTTSCEEEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEecCCCccceEEEEEEEeCCEEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEE
Confidence            6899999999999999997532     578999999999999999999764 3467999999987665432      335


Q ss_pred             EEECCCCC
Q psy12894        115 VIIHFSVS  122 (124)
Q Consensus       115 vi~Hp~y~  122 (124)
                      +++||+|+
T Consensus        81 i~~hp~y~   88 (247)
T 3mhw_U           81 LILHKDYS   88 (247)
T ss_dssp             EEECTTCE
T ss_pred             EEECCCCC
Confidence            99999996

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=99.83  E-value=1.7e-20  Score=134.63  Aligned_cols=77  Identities=26%  Similarity=0.468  Sum_probs=62.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeC----C--ceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCC---------
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK----G--KFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKN---------  110 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~----~--~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~---------  110 (124)
                      |+||..+.+++|||||+|...    +  .++|||+||+++||||||||+... ....+.|++|.++.....         
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~   80 (290)
T 1fiw_A            1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQ   80 (290)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCE
T ss_pred             CCCCEECCCCCCCcEEEEEEeccCCCccceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCce
Confidence            689999999999999999752    2  478999999999999999999753 345789999988754221         


Q ss_pred             --CeecEEECCCCCC
Q psy12894        111 --ESVPVIIHFSVSN  123 (124)
Q Consensus       111 --~~~~vi~Hp~y~~  123 (124)
                        ...+|++||+|+.
T Consensus        81 ~~~V~~i~~Hp~y~~   95 (290)
T 1fiw_A           81 ERYVEKIIIHEKYSA   95 (290)
T ss_dssp             EEEEEEEEECTTCBT
T ss_pred             EEEEEEEEECCCCCC
Confidence              1345999999974

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=99.83  E-value=1.6e-20  Score=129.87  Aligned_cols=72  Identities=36%  Similarity=0.589  Sum_probs=60.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++.. +.++|+|+||+++||||||||+.    ..+.|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-~~~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~   75 (222)
T 1hj8_A            1 IVGGYECKAYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCYK----SRVEVRLGEHNIKVTEGSEQFISSSRVIRHPN   75 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEES-SSEEEEEEEEETTEEEECGGGCC----SSCEEEESCSBTTSCCSCCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCEEEEEEc-CCcEEEeEEecCCEEEECHHhcC----CCeEEEEcccccccCCCCcEEEEEEEEEECCC
Confidence            68999999999999999964 56899999999999999999986    35789999987653222      335899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        76 y~~   78 (222)
T 1hj8_A           76 YSS   78 (222)
T ss_dssp             CBT
T ss_pred             CCC
Confidence            974

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=99.83  E-value=7.8e-21  Score=135.88  Aligned_cols=88  Identities=26%  Similarity=0.470  Sum_probs=61.6

Q ss_pred             ccCCcCcC----CCCCccCCCceeCCEEcCCCCCceEEEEEe-CCceeEEEEEecCCEEEecccccCCCCCceEEEEEce
Q psy12894         29 SSMNHCNC----ACGQVERNQRIVGGNVTKLHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE  103 (124)
Q Consensus        29 ~~~~~~~~----~cg~~~~~~ri~gg~~~~~~~~Pw~v~l~~-~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~  103 (124)
                      .....|..    .||+....     |..+.+++|||+|+|.. .+.++|||+||+++||||||||+..  ...+.|++|.
T Consensus        36 ~d~~sC~p~~~c~CG~~~~~-----g~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~~~V~~G~  108 (283)
T 3f1s_B           36 EDHKQCVPHDQCACGVLTSE-----KRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLL--HRNITVKTYF  108 (283)
T ss_dssp             TTSSCEEECSTTCTTCCCC-------------CCTTEEEEECTTSCEEEEEEEEETTEEEECHHHHTS--CSSCEEEECT
T ss_pred             CCCCccccccccccCccccC-----CccccccccCCEEEEEecCCCeeeccEEecCCEEEEcHHhcCc--cCceEEEEee
Confidence            34455533    78875332     88899999999999987 4678999999999999999999964  3578999998


Q ss_pred             eecCCCCC---eecEEECCCCCC
Q psy12894        104 HDRLSKNE---SVPVIIHFSVSN  123 (124)
Q Consensus       104 ~~~~~~~~---~~~vi~Hp~y~~  123 (124)
                      ++......   ..+|++||+|+.
T Consensus       109 ~~~~~~~~~~~v~~i~~Hp~y~~  131 (283)
T 3f1s_B          109 NRTSQDPLMIKITHVHVHMRYDA  131 (283)
T ss_dssp             TC-CCCCEEEEEEEEEECTTCBT
T ss_pred             eeCCCCcEEEEeEEEEECCCCCC
Confidence            77654333   335999999973

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=99.83  E-value=2.2e-20  Score=130.97  Aligned_cols=86  Identities=36%  Similarity=0.717  Sum_probs=67.3

Q ss_pred             CCCCccC-----CCceeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCC
Q psy12894         37 ACGQVER-----NQRIVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSK  109 (124)
Q Consensus        37 ~cg~~~~-----~~ri~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~  109 (124)
                      .||.+..     ..||+||..+.+++|||+|++... +.++|+|+||+++||||||||+... .+..+.|++|.++....
T Consensus         3 ~cg~~~~~~~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~   82 (247)
T 1ddj_A            3 DCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNL   82 (247)
T ss_dssp             CTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGTTCSCGGGCEEEESCSBSSSC
T ss_pred             ccCCCCCCCcccCCCcCCCEECCCCCCCcEEEEEcCCCCeEEEEEEeeCCEEEEcHHHcCCCCCCccEEEEEcccccCcc
Confidence            4665432     358999999999999999999864 5689999999999999999999753 34678999999875432


Q ss_pred             CC------eecEEECCCCC
Q psy12894        110 NE------SVPVIIHFSVS  122 (124)
Q Consensus       110 ~~------~~~vi~Hp~y~  122 (124)
                      ..      ..+++.||.++
T Consensus        83 ~~~~~~~~v~~~~~hp~~~  101 (247)
T 1ddj_A           83 EPHVQEIEVSRLFLEPTRK  101 (247)
T ss_dssp             CTTCEEEEEEEEEECTTSC
T ss_pred             CCceEEEEeeeEEcCCCCC
Confidence            21      23488999754

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=99.83  E-value=2.1e-20  Score=129.55  Aligned_cols=73  Identities=37%  Similarity=0.625  Sum_probs=61.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCC---CC----eecEEEC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSK---NE----SVPVIIH  118 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~---~~----~~~vi~H  118 (124)
                      |+||..+.+++|||+|++... +.++|+|+||+++||||||||+.    ..+.|++|.++....   ..    ..++++|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~H   76 (227)
T 2psx_A            1 IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRK----KVFRVRLGHYSLSPVYESGQQMFQGVKSIPH   76 (227)
T ss_dssp             CBTCEECCTTSCTTEEEEEETTTEEEEEEEEEETTEEEECGGGCC----SSCEEEESCCBSSCCCCTTCEEEEEEEEEEC
T ss_pred             CCCCEECCCCCCCCEEEEEecCCCceEEEEEEcCCEEEEhHHcCC----CCcEEEEeeeecccCCCCCcEEEEEEEEEeC
Confidence            689999999999999999876 56899999999999999999986    357899999876532   11    2358999


Q ss_pred             CCCCC
Q psy12894        119 FSVSN  123 (124)
Q Consensus       119 p~y~~  123 (124)
                      |+|+.
T Consensus        77 p~y~~   81 (227)
T 2psx_A           77 PGYSH   81 (227)
T ss_dssp             TTCCS
T ss_pred             CCCCC
Confidence            99973

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=99.83  E-value=2.5e-20  Score=128.81  Aligned_cols=73  Identities=36%  Similarity=0.590  Sum_probs=61.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC----ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG----KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~----~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||..+.+++|||+|++....    .++|+|+||+++||||||||+.    ..+.|++|.++......      ..+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~   76 (226)
T 4ag1_A            1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLGAHNITEEEDTWQKLEVIKQF   76 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEEECSSSSCEEEEEEEEETTEEEECGGGCC----SEEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEEcCCCcccEEEEEEEeCCEEEECcccCC----CCeEEEeCCcccCCCCCcceEEEEEEEE
Confidence            6899999999999999997642    5889999999999999999984    57899999987654433      33489


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        77 ~hp~y~~   83 (226)
T 4ag1_A           77 RHPKYNT   83 (226)
T ss_dssp             ECTTCCT
T ss_pred             eCCCCCC
Confidence            9999973

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=99.83  E-value=3.8e-20  Score=128.13  Aligned_cols=73  Identities=32%  Similarity=0.494  Sum_probs=60.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC----eecEEECCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE----SVPVIIHFSVS  122 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~----~~~vi~Hp~y~  122 (124)
                      |+||.++.+++|||+|++.....++|+|+||+++||||||||+.    ..+.|++|..+......    ..++++||+|+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~   76 (224)
T 2qxi_A            1 IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKM----NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYS   76 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCC----SCEEEEESCSBTTCTTSEEEEECEEEECTTCC
T ss_pred             CCCCeECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEhHHcCC----CCcEEEEeeeecCCCccEEEEEEEEEECCCCC
Confidence            68999999999999999965444489999999999999999984    56899999987643222    33589999997


Q ss_pred             C
Q psy12894        123 N  123 (124)
Q Consensus       123 ~  123 (124)
                      .
T Consensus        77 ~   77 (224)
T 2qxi_A           77 T   77 (224)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=99.83  E-value=2.1e-21  Score=150.30  Aligned_cols=88  Identities=27%  Similarity=0.526  Sum_probs=54.5

Q ss_pred             CCCCCccC----CCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC-
Q psy12894         36 CACGQVER----NQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN-  110 (124)
Q Consensus        36 ~~cg~~~~----~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~-  110 (124)
                      ..||....    ..||+||..+.+++|||+|+|.....++|||+||+++||||||||+.......+.|++|.++..... 
T Consensus       307 ~~CG~~~~~~~~~~rIvgG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~  386 (565)
T 2xrc_A          307 LSCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDL  386 (565)
T ss_dssp             CCCCC--------------------CCTTBCEEEESSSCCCCCEEEETTEEEECHHHHTTCSSCCEEEEC----------
T ss_pred             cccCCCCCcccCCCceECCEECCCCCCCcEEEEecCCceeeeEEEEeCCEEEEChhhcccCCCcceEEEEEEeeccCCCC
Confidence            36887642    4699999999999999999998877789999999999999999999876667899999988754322 


Q ss_pred             ------CeecEEECCCCCC
Q psy12894        111 ------ESVPVIIHFSVSN  123 (124)
Q Consensus       111 ------~~~~vi~Hp~y~~  123 (124)
                            ...+|++||+|+.
T Consensus       387 ~~~~~~~V~~ii~Hp~Y~~  405 (565)
T 2xrc_A          387 KRIVIEYVDRIIFHENYNA  405 (565)
T ss_dssp             ---CEEEEEEEEECTTCCT
T ss_pred             CccEEEEEEEEEeCCCCCC
Confidence                  1345999999974

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=99.83  E-value=1.2e-20  Score=130.65  Aligned_cols=76  Identities=26%  Similarity=0.621  Sum_probs=66.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC---eecEEECCCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE---SVPVIIHFSVSN  123 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~---~~~vi~Hp~y~~  123 (124)
                      |+||..+.+++|||+|++...+.++|+|+||+++||||||||+.......+.|++|.++......   ..++++| +|+.
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h-~y~~   79 (235)
T 3h7t_A            1 IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIV-RYHP   79 (235)
T ss_dssp             CBTCEECCTTTSTTEEEEEETTSCCEEEEESSSSEEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEEC-SCBT
T ss_pred             CCCCEECCCCCCCcEEEEecCCCceEeEEEeeCCEEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEee-ecCC
Confidence            68999999999999999999888999999999999999999998666788999999988765443   3348999 9873

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=99.82  E-value=2.1e-20  Score=129.95  Aligned_cols=75  Identities=31%  Similarity=0.493  Sum_probs=63.6

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCC--CCCceEEEEEceeecCCCCC----eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGEHDRLSKNE----SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~--~~~~~~~V~~G~~~~~~~~~----~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|++.  +.++|+|+||+++||||||||+..  .....+.|++|.++......    ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~--~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~   78 (242)
T 3tvj_B            1 IYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEG   78 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEE--SSEEEEEEEETTTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTT
T ss_pred             CcCCeeCCCCCCCCEEEEe--cCCcEEEEEecCCEEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCC
Confidence            6899999999999999997  568999999999999999999975  35567899999987655443    335999999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        79 y~~   81 (242)
T 3tvj_B           79 YTH   81 (242)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            974

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=99.82  E-value=2.9e-20  Score=128.18  Aligned_cols=73  Identities=40%  Similarity=0.614  Sum_probs=61.2

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC----ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG----KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~----~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||.++.+++|||+|++....    .++|+|+||+++||||||||+.    ..+.|++|.++......      ..+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~----~~~~v~~g~~~~~~~~~~~~~~~v~~~~   76 (224)
T 3rp2_A            1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKG----REITVILGAHDVRKRESTQQKIKVEKQI   76 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCC----SEEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCcEEEEEeEEeeCCEEEEchhcCC----CCcEEEEeccccCcCCCCcEEEEEEEEE
Confidence            6899999999999999998643    5799999999999999999984    57899999987654332      33589


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        77 ~hp~y~~   83 (224)
T 3rp2_A           77 IHESYNS   83 (224)
T ss_dssp             ECTTCCS
T ss_pred             ECCCccC
Confidence            9999973

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=99.82  E-value=2.8e-20  Score=128.65  Aligned_cols=76  Identities=32%  Similarity=0.618  Sum_probs=62.2

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC-------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE-------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~-------~~~vi~Hp  119 (124)
                      |+||..+.+++|||+|++.....++|+|+||+++||||||||+.......+.|++|.++......       ..+++.| 
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h-   79 (225)
T 1a7s_A            1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSEN-   79 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECS-
T ss_pred             CCCCEECCCCCCCcEEEEecCCCcEEEEEEeeCCEEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecc-
Confidence            68999999999999999998888999999999999999999998755678999999987654432       2348899 


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        80 ~y~~   83 (225)
T 1a7s_A           80 GYDP   83 (225)
T ss_dssp             SCBT
T ss_pred             cccC
Confidence            9873

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=99.82  E-value=4.2e-20  Score=127.64  Aligned_cols=73  Identities=38%  Similarity=0.636  Sum_probs=61.2

Q ss_pred             eeCCEEcCCCCCceEEEEEeC---C-ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK---G-KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~---~-~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||.++.+++|||+|++...   + .++|+|+||+++||||||||+.    ..+.|++|.++......      ..+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~~~   76 (227)
T 3fzz_A            1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKG----RSMTVTLGAHNIKAKEETQQIIPVAKAI   76 (227)
T ss_dssp             CBTCEECCTTSSTTEEEEEEECSSSCEEEEEEEEEETTEEEECTTCCC----EEEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEEEeCCCceeEEEEEEEeCCEEEECcccCC----CCcEEEEcccccCCCCCCceEEEEEEEE
Confidence            689999999999999999763   2 6899999999999999999984    57899999988654433      33589


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        77 ~hp~y~~   83 (227)
T 3fzz_A           77 PHPDYNP   83 (227)
T ss_dssp             ECTTCBT
T ss_pred             ECcCCCC
Confidence            9999973

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=99.82  E-value=2e-20  Score=131.23  Aligned_cols=76  Identities=34%  Similarity=0.584  Sum_probs=62.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeC--CceeEEEEEecCCEEEecccccCC------CCCceEEEEEceeecCCCCC-------
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK--GKFYCGATLIAKRHVLTAAHCIEG------VNPKEIKVTLGEHDRLSKNE-------  111 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~--~~~~CgGsLi~~~~vlTaahC~~~------~~~~~~~V~~G~~~~~~~~~-------  111 (124)
                      |+||..+.+++|||+|++...  ..++|+|+||+++||||||||+..      .....+.|++|.++......       
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~   80 (259)
T 3rm2_H            1 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM   80 (259)
T ss_dssp             CBSCEECCTTSSTTEEEEEEETTEEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEECCCCceEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeE
Confidence            689999999999999999653  357999999999999999999952      24467899999987643322       


Q ss_pred             eecEEECCCCC
Q psy12894        112 SVPVIIHFSVS  122 (124)
Q Consensus       112 ~~~vi~Hp~y~  122 (124)
                      ..++++||+|+
T Consensus        81 v~~i~~hp~y~   91 (259)
T 3rm2_H           81 LEKIYIHPRYN   91 (259)
T ss_dssp             EEEEEECTTCB
T ss_pred             EEEEEECCCCC
Confidence            34599999997

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=99.82  E-value=2.9e-20  Score=145.43  Aligned_cols=87  Identities=32%  Similarity=0.582  Sum_probs=71.0

Q ss_pred             CCCCCccCCCceeCCEEcCCCCCceEEEEEeC---CceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCC-
Q psy12894         36 CACGQVERNQRIVGGNVTKLHEFPWIAALTKK---GKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKN-  110 (124)
Q Consensus        36 ~~cg~~~~~~ri~gg~~~~~~~~Pw~v~l~~~---~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~-  110 (124)
                      ..||.. ...||+||..+.+++|||||+|...   ..++|||+||+++||||||||+... .+..+.|++|.++..... 
T Consensus       378 ~~Cg~~-~~~rIvgG~~a~~~~~Pw~v~L~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~  456 (625)
T 2f83_A          378 NECTTK-IKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKE  456 (625)
T ss_dssp             CSSCSC-CCSCCCSSSSCCTTSSTTEEEEEECSSSSEEEEEEEECSSSEEEECGGGGSSCCCGGGEEEEESCSBGGGCCS
T ss_pred             cccCCC-CCCceECCEECCCCCCCeEEEEEEecCCCcEEEEEEEECCCEEEEcHHhCCCCCCCceEEEEEEeccCCCCCC
Confidence            368864 4679999999999999999999875   4689999999999999999999753 346789999998764322 


Q ss_pred             -----CeecEEECCCCCC
Q psy12894        111 -----ESVPVIIHFSVSN  123 (124)
Q Consensus       111 -----~~~~vi~Hp~y~~  123 (124)
                           .+.+|++||+|+.
T Consensus       457 ~~~~~~V~~ii~Hp~y~~  474 (625)
T 2f83_A          457 DTSFFGVQEIIIHDQYKM  474 (625)
T ss_dssp             SCCCEEEEEEEECTTCCB
T ss_pred             CceEEeEEEEEECCccCc
Confidence                 2446999999973

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.82  E-value=3.6e-20  Score=127.74  Aligned_cols=72  Identities=33%  Similarity=0.595  Sum_probs=60.2

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++. .+.++|+|+||+++||||||||+.    ..+.|++|.++......      ..++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~-~~~~~C~GtLI~~~~VLTAAhC~~----~~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~   75 (223)
T 4i8h_A            1 IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYK----SGIQVRLGEDNINVVEGNEQFISASKSIVHPS   75 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-SSSEEEEEEECSSSEEEECGGGCC----SSCEEEESCSSTTSCCSCCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCeEEEec-CCCcEEEEEEEcCCEEEecHHhCC----CCcEEEEccccccccCCCcEEEEEeEEEECcC
Confidence            6899999999999999997 456789999999999999999986    35789999987653322      235899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        76 y~~   78 (223)
T 4i8h_A           76 YNS   78 (223)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            974

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=99.82  E-value=3.9e-20  Score=128.66  Aligned_cols=71  Identities=30%  Similarity=0.515  Sum_probs=59.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC------CeecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN------ESVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~------~~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|++.. + ++|+|+||+++||||||||+.    ..+.|++|.++.....      ...++++||+
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-~-~~CgGsLIs~~~VLTAAHC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~   74 (235)
T 1ton_A            1 IVGGYKCEKNSQPWQVAVIN-E-YLCGGVLIDPSWVITAAHCYS----NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPD   74 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEES-S-SEEEEEEEETTEEEECGGGCC----SCCEEEESCSBTTSCCTTCEEECEEEEEECTT
T ss_pred             CCCCEECCCCCcCcEEEEcc-C-CeEEEEEecCCEEEEcHHhCC----CCcEEEeCcccccCCCCcceEEEEEEEEeCCC
Confidence            68999999999999999976 3 899999999999999999994    4578999998865322      1345999999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        75 y~~   77 (235)
T 1ton_A           75 YIP   77 (235)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            974

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=99.81  E-value=2.5e-20  Score=129.96  Aligned_cols=74  Identities=27%  Similarity=0.409  Sum_probs=59.9

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC-----CCceEEEEEceeecC-----CCCCeecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-----NPKEIKVTLGEHDRL-----SKNESVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~-----~~~~~~V~~G~~~~~-----~~~~~~~vi  116 (124)
                      |+||..+.+++|||+|++...  +.|||+||+++||||||||+...     ....+.|++|.++..     ......+++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~--~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~   78 (242)
T 2qy0_B            1 IIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVS   78 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEESS--SEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEccC--CCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEE
Confidence            689999999999999999753  57999999999999999999632     345688999987653     233566799


Q ss_pred             ECCCCC
Q psy12894        117 IHFSVS  122 (124)
Q Consensus       117 ~Hp~y~  122 (124)
                      +||+|+
T Consensus        79 ~Hp~y~   84 (242)
T 2qy0_B           79 VHPDYR   84 (242)
T ss_dssp             ECTTCC
T ss_pred             ECCCCc
Confidence            999997

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=99.81  E-value=8.3e-20  Score=125.87  Aligned_cols=76  Identities=34%  Similarity=0.679  Sum_probs=63.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeC---CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK---GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~---~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~  117 (124)
                      |+||..+.+++|||+|++...   +.++|+|+||+++||||||||+.......+.|++|.++......      ..++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~   80 (221)
T 1fuj_A            1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFL   80 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTBTTCCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred             CCCCEECCCCCcCCEEEEEEecCCCCEEEEEEEecCCEEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEe
Confidence            689999999999999999874   35899999999999999999998755568999999987654332      234889


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      | +|+.
T Consensus        81 h-~y~~   85 (221)
T 1fuj_A           81 N-NYDA   85 (221)
T ss_dssp             C-CCBT
T ss_pred             C-CCCC
Confidence            9 9873

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=99.80  E-value=6.4e-20  Score=126.57  Aligned_cols=73  Identities=37%  Similarity=0.565  Sum_probs=60.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCCC----eecEEECCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKNE----SVPVIIHFSV  121 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~~----~~~vi~Hp~y  121 (124)
                      |+||..+.+++|||+|++.    +.|+|+||+++||||||||+... ....+.|++|..+......    ..++++||+|
T Consensus         1 IvgG~~a~~~~~Pw~v~l~----~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y   76 (224)
T 3beu_A            1 VVGGTRAAQGEFPFMVRLS----MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGF   76 (224)
T ss_dssp             CBTCEECCTTTSTTEEEET----TTEEEEEEETTEEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTC
T ss_pred             CCCCeECCCCCCCEEEEEC----CceeEEEeeCCEEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCc
Confidence            6899999999999999994    56999999999999999999753 2456889999988755432    3359999999


Q ss_pred             CC
Q psy12894        122 SN  123 (124)
Q Consensus       122 ~~  123 (124)
                      +.
T Consensus        77 ~~   78 (224)
T 3beu_A           77 TK   78 (224)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=99.80  E-value=1.2e-19  Score=125.72  Aligned_cols=73  Identities=30%  Similarity=0.526  Sum_probs=60.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC-------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE-------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~-------~~~vi~Hp  119 (124)
                      |+||.++.+++|||+|++...+.++|+|+||+++||||||||+.    ..+.|++|.++......       ...++.||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~   76 (234)
T 3s69_A            1 VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCDN----TNFQMKLGVHSKKVLNEDEQTRNPKEKFICPN   76 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEECSSCEEEEEEEEETTEEEECGGGCC----SSCEEEESCCCSSSCCTTCEEECEEEEEECTT
T ss_pred             CCCCccCCCCCCceEEEEeeCCCeEEeEEEeeCCEEEEchhhCC----CCceEEecccccccccCCcceeeceEEEECCC
Confidence            68999999999999999988888999999999999999999985    45789999877553322       12266799


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        77 ~~~~   80 (234)
T 3s69_A           77 KKND   80 (234)
T ss_dssp             CCTT
T ss_pred             ccCC
Confidence            9973

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=99.79  E-value=7.3e-20  Score=127.62  Aligned_cols=73  Identities=30%  Similarity=0.513  Sum_probs=52.7

Q ss_pred             CCEEcCCCCCceEEEEEe--CC--ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC--------CeecEE
Q psy12894         49 GGNVTKLHEFPWIAALTK--KG--KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN--------ESVPVI  116 (124)
Q Consensus        49 gg~~~~~~~~Pw~v~l~~--~~--~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~--------~~~~vi  116 (124)
                      ||..+.+++|||+|++..  .+  .++|+|+||+++||||||||+..  ...+.|++|.++.....        ...+++
T Consensus         1 gG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAhC~~~--~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~   78 (240)
T 1fon_A            1 NGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST--SRTYQVVLGEYDRSVLEGSEQVIPINAGDLF   78 (240)
T ss_dssp             --------CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCT--TSCEEEEEEEEETTEEEEEEEEEEECTTSEE
T ss_pred             CCccCCcCCcccEEEEEEecCCcEeeEEEEEEeeCCEEEECHHHCCC--CCceEEEeeeeeccccCCCceeEeeeeeEEE
Confidence            688899999999999986  33  38999999999999999999974  36789999998765322        223599


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        79 ~Hp~y~~   85 (240)
T 1fon_A           79 VHPLWNS   85 (240)
T ss_dssp             ECTTCCT
T ss_pred             ECCCCcC
Confidence            9999974

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=99.79  E-value=1.1e-19  Score=126.15  Aligned_cols=72  Identities=28%  Similarity=0.494  Sum_probs=59.8

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC-------CeecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN-------ESVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~-------~~~~vi~Hp  119 (124)
                      |+||.++.+++|||+|++.. +.++|+|+||+++||||||||+..    .+.|++|.++.....       ...++++||
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~-~~~~CgGsLIs~~~VLTAAHC~~~----~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp   75 (231)
T 2aiq_A            1 VIGGDECNINEHRFLALVYA-NGSLCGGTLINQEWVLTARHCDRG----NMRIYLGMHNLKVLNKDALRRFPKEKYFCLN   75 (231)
T ss_dssp             CBSCEECCTTSCTTEEEEEE-TTEEEEEEECSSSEEEECGGGCCS----SCEEEESCSCTTSCCTTCEEECEEEEECCSS
T ss_pred             CCCCeECCCCCCCeEEEEEc-CCCeEEEEEEeCCEEEEcHHcCCC----CCEEEEecccccccCCCceEEEEEEEEEECC
Confidence            68999999999999999985 458899999999999999999863    578999998765321       133489999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        76 ~y~~   79 (231)
T 2aiq_A           76 TRND   79 (231)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            9974

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=99.79  E-value=2e-19  Score=124.74  Aligned_cols=73  Identities=32%  Similarity=0.553  Sum_probs=59.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeC--CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCCe-------ecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK--GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNES-------VPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~--~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~~-------~~vi~  117 (124)
                      |+||..+.+++|||+|++...  ..++|+|+||+++||||||||+.    ..+.|++|.++.......       .++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~   76 (234)
T 3s9c_A            1 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDR----RNIRIKLGMHSKNIRNEDEQIRVPRGKYFC   76 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEEEETTEEEECGGGCC----TTEEEEESCSSSSSCCTTCEEECEEEEECC
T ss_pred             CCCCeeCCCCCCCeEEEEEECCCCcEEEeeEEeeCCEEEEchhhcC----CCceEEEeecccccccCCcceEEeeeEEEe
Confidence            689999999999999999876  56889999999999999999985    458899998876533221       12566


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        77 h~~~~~   82 (234)
T 3s9c_A           77 LNTKFP   82 (234)
T ss_dssp             SSCSST
T ss_pred             CCCCCC
Confidence            999963

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=99.79  E-value=2e-19  Score=124.85  Aligned_cols=73  Identities=34%  Similarity=0.591  Sum_probs=59.5

Q ss_pred             eeCCEEcCCCCCceEEEEEeC--CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCCe-------ecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK--GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNES-------VPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~--~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~~-------~~vi~  117 (124)
                      |+||.++.+++|||+|++...  +.++|+|+||+++||||||||+.    ..+.|++|.++.......       .++++
T Consensus         1 IvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~----~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~   76 (238)
T 4e7n_A            1 IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCDR----KNFRIKLGMHSKKVPNEDEQTRVPKEKFFC   76 (238)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTTCCEEEEEEECSSSEEEECGGGCC----SSCEEEESCSCSSSCCTTCEEECEEEEECS
T ss_pred             CCCCeeCCCCCcCcEEEEEECCCCCEEEEEEEecCCEEEEhHHcCC----CCCeEEeceeeccccCCCceeEeeeeeEEc
Confidence            689999999999999999876  66899999999999999999985    357899998876543221       12567


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        77 h~~~~~   82 (238)
T 4e7n_A           77 LSSKNY   82 (238)
T ss_dssp             STTCCC
T ss_pred             CCCCCC
Confidence            999974

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=99.79  E-value=4.1e-19  Score=123.92  Aligned_cols=74  Identities=27%  Similarity=0.474  Sum_probs=62.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC--------CeecEEEC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN--------ESVPVIIH  118 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~--------~~~~vi~H  118 (124)
                      |+||..+.+ +|||+|++...+.++|+|+||+++||||||||+.......+.|++|.++.....        ...+++.|
T Consensus         1 IvgG~~a~~-~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~   79 (240)
T 1si5_H            1 VVNGIPTRT-NIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYG   79 (240)
T ss_dssp             CBSCEECSS-CCTTEEEEEESSSEEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEEC
T ss_pred             CCCCeeCCC-CCCeEEEEEeCCCeEEEEEEeeCCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcC
Confidence            689999999 999999999888899999999999999999999865567899999998865431        12348899


Q ss_pred             CCC
Q psy12894        119 FSV  121 (124)
Q Consensus       119 p~y  121 (124)
                      |+.
T Consensus        80 p~~   82 (240)
T 1si5_H           80 PEG   82 (240)
T ss_dssp             SST
T ss_pred             CCC
Confidence            963

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=99.78  E-value=6.2e-20  Score=139.86  Aligned_cols=84  Identities=23%  Similarity=0.360  Sum_probs=60.1

Q ss_pred             cCCCCCccCCCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCC--CC
Q psy12894         35 NCACGQVERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSK--NE  111 (124)
Q Consensus        35 ~~~cg~~~~~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~--~~  111 (124)
                      ...||..     .++|..+.+++|||+|++...+.++|||+||+++||||||||+... ....+.|++|.++....  ..
T Consensus       217 ~~~CG~~-----~~~g~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~  291 (509)
T 2odp_A          217 DTICGVG-----NMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFL  291 (509)
T ss_dssp             SCCSSCC-----CCCTTSCHHHHCTTEEEEEC----CEEEEECSSSEEEECGGGC--------CEEEECCTTCTTCEEEC
T ss_pred             CcccCCc-----CCCCCccccCCCCcEEEEEeCCCcEEEEEEEcCCEEEEcHHHcCCCCCcceEEEEeCCcccCCCceee
Confidence            4579874     3578888899999999998777789999999999999999999752 34578999998764321  12


Q ss_pred             eecEEECCCCCC
Q psy12894        112 SVPVIIHFSVSN  123 (124)
Q Consensus       112 ~~~vi~Hp~y~~  123 (124)
                      ..++++||+|+.
T Consensus       292 v~~i~~Hp~y~~  303 (509)
T 2odp_A          292 IEKAVISPGFDV  303 (509)
T ss_dssp             EEEEEECTTCCT
T ss_pred             eEEEEECCCCcc
Confidence            446999999974

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.78  E-value=3.1e-19  Score=129.14  Aligned_cols=72  Identities=26%  Similarity=0.440  Sum_probs=59.9

Q ss_pred             CEEcCCCCCceEEEEEe-CCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC---eecEEECCCCCC
Q psy12894         50 GNVTKLHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE---SVPVIIHFSVSN  123 (124)
Q Consensus        50 g~~~~~~~~Pw~v~l~~-~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~---~~~vi~Hp~y~~  123 (124)
                      |..+.+++|||+|+|.. .+.++|+|+||+++||||||||+..  ...+.|++|.++......   ..++++||+|+.
T Consensus        97 G~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~--~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~  172 (317)
T 3h5c_B           97 KRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLL--HRNITVKTYFNRTSQDPLMIKITHVHVHMRYDA  172 (317)
T ss_dssp             CSSCCTTCCTTEEEEECSSSCEEEEEEEEETTEEEECHHHHHS--CSSCEEEECTTSCTTSCEEEEEEEEEECTTCBT
T ss_pred             cccCccCCCCcEEEEeccCCceeeeeEEeeCCEEEEChHhcCc--CCceEEEEeeecCCCCcEEEEeeEEEECCCCCC
Confidence            78899999999999986 5678999999999999999999963  456899999877654433   345999999973

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=99.76  E-value=1.7e-18  Score=138.29  Aligned_cols=87  Identities=36%  Similarity=0.706  Sum_probs=70.0

Q ss_pred             CCCCCccC-----CCceeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCC
Q psy12894         36 CACGQVER-----NQRIVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLS  108 (124)
Q Consensus        36 ~~cg~~~~-----~~ri~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~  108 (124)
                      ..||+...     ..||+||..+.+++|||||+|... +.++|||+||+++||||||||+... ....+.|++|.++...
T Consensus       546 ~~CG~~~~~~~~~~~RIvGG~~a~~~~~PW~VsL~~~~~~~~CGGSLIs~~wVLTAAHCv~~~~~~~~~~V~lG~~~~~~  625 (791)
T 4dur_A          546 FDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVN  625 (791)
T ss_dssp             CCTTCCSSCCCCCCTTCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGSSCCCGGGCEEEESCCBSSS
T ss_pred             cCcCCcccccccCCCceECCEECCCCCCCeEEEEEecCCCeEEEEEEEeCCEEEECHHHcCCcCCCceEEEEeccccccC
Confidence            36887543     369999999999999999999764 6789999999999999999999753 3467899999987654


Q ss_pred             CCC------eecEEECCCCC
Q psy12894        109 KNE------SVPVIIHFSVS  122 (124)
Q Consensus       109 ~~~------~~~vi~Hp~y~  122 (124)
                      ...      ..++++||.++
T Consensus       626 ~~~~~q~~~V~~i~~hp~~n  645 (791)
T 4dur_A          626 LEPHVQEIEVSRLFLEPTRK  645 (791)
T ss_dssp             CCTTCEEEEEEEEEECTTCC
T ss_pred             CCCccEEEEEEEEECCCCCC
Confidence            332      23489999864

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=99.76  E-value=1.7e-18  Score=120.48  Aligned_cols=73  Identities=26%  Similarity=0.512  Sum_probs=58.2

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCC--CCceEEEEEceeecCCC--C------CeecE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGV--NPKEIKVTLGEHDRLSK--N------ESVPV  115 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~--~~~~~~V~~G~~~~~~~--~------~~~~v  115 (124)
                      |+||.   +++|||+|++... +.++|+|+||+++||||||||+...  ....+.|++|.++....  .      ...++
T Consensus         1 IvgG~---~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i   77 (234)
T 2asu_B            1 VVGGH---PGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKM   77 (234)
T ss_dssp             CBSCE---ECCCTTEEEEECTTSCEEEEEEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEE
T ss_pred             CCCcc---cCCCcceEEeeccCCCEEEEEEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEE
Confidence            57887   5789999999875 5689999999999999999999652  35678999999876543  1      12348


Q ss_pred             EECCCCC
Q psy12894        116 IIHFSVS  122 (124)
Q Consensus       116 i~Hp~y~  122 (124)
                      ++||+++
T Consensus        78 ~~hp~~~   84 (234)
T 2asu_B           78 VCGPSGS   84 (234)
T ss_dssp             EECSTTC
T ss_pred             ecCCCCC
Confidence            9999854

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=99.76  E-value=9.2e-19  Score=120.84  Aligned_cols=75  Identities=24%  Similarity=0.453  Sum_probs=61.8

Q ss_pred             eCCEEcCCCCCceEEEEEeCCc--e-eEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC-----eecEEECC
Q psy12894         48 VGGNVTKLHEFPWIAALTKKGK--F-YCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE-----SVPVIIHF  119 (124)
Q Consensus        48 ~gg~~~~~~~~Pw~v~l~~~~~--~-~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~-----~~~vi~Hp  119 (124)
                      .||..+.+++|||+|++...+.  + +|+|+||+++||||||||+.......+.|++|..+......     ..++++| 
T Consensus         1 ~gG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h-   79 (228)
T 3h7o_A            1 KGGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLS-   79 (228)
T ss_dssp             CCCEECCGGGSTTEEEEEECGGGCCEEEEEEESSSSEEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEES-
T ss_pred             CCCccCCcCCCCeEEEEeecCCCCceEeeeEEeeCCEEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEcc-
Confidence            3799999999999999987654  4 89999999999999999998666778999999987654332     3348889 


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        80 ~y~~   83 (228)
T 3h7o_A           80 FYRQ   83 (228)
T ss_dssp             SCBT
T ss_pred             ccCC
Confidence            8863

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=99.73  E-value=2.9e-18  Score=130.18  Aligned_cols=82  Identities=30%  Similarity=0.448  Sum_probs=62.3

Q ss_pred             cCCCCCccCCCceeCCEEcCCCCCceEEEEEe----CCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCC
Q psy12894         35 NCACGQVERNQRIVGGNVTKLHEFPWIAALTK----KGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSK  109 (124)
Q Consensus        35 ~~~cg~~~~~~ri~gg~~~~~~~~Pw~v~l~~----~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~  109 (124)
                      ...||....     .+..+.+++|||+|+|..    .+.++|||+||+++||||||||+... ....+.|++|.+.  ..
T Consensus       208 ~~~CG~~~~-----~~~~~~~~~~Pw~v~l~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~--~~  280 (497)
T 1rrk_A          208 LSLCGMVWE-----HRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK--RD  280 (497)
T ss_dssp             TTCTTCCCC-----CTTCCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEETTCS--SC
T ss_pred             cCCCCCCCC-----CCCCCCccccCcEEEEEEEcCCCCCceeEEEEecCCEEEECHHhCCCCCCceEEEEEeCCcc--ce
Confidence            457987532     134566788999999975    24589999999999999999999753 3467899999752  23


Q ss_pred             CCeecEEECCCCCC
Q psy12894        110 NESVPVIIHFSVSN  123 (124)
Q Consensus       110 ~~~~~vi~Hp~y~~  123 (124)
                      ....++++||+|+.
T Consensus       281 ~~v~~i~~Hp~y~~  294 (497)
T 1rrk_A          281 LEIEVVLFHPNYNI  294 (497)
T ss_dssp             EEEEEEEECTTCCT
T ss_pred             eeeEEEEeCCCccc
Confidence            34667999999973

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=99.67  E-value=1e-16  Score=126.61  Aligned_cols=82  Identities=29%  Similarity=0.427  Sum_probs=56.9

Q ss_pred             cCCCCCccCCCceeCCEEcCCCCCceEEEEEeC----CceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCC
Q psy12894         35 NCACGQVERNQRIVGGNVTKLHEFPWIAALTKK----GKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSK  109 (124)
Q Consensus        35 ~~~cg~~~~~~ri~gg~~~~~~~~Pw~v~l~~~----~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~  109 (124)
                      ...||..     ..+|..+.+++|||+|.+...    +.++|||+||+++||||||||+... ....+.|++|..+  ..
T Consensus       450 ~~~CG~~-----~~~~~~~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~--~~  522 (741)
T 3hrz_D          450 LSLCGMV-----WEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK--RD  522 (741)
T ss_dssp             TTSTTCC-----CCC---CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC-----CCEEEEETTCS--CC
T ss_pred             ccccccc-----cccCCcccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhccccCCcceEEEEeCCCc--eE
Confidence            3467764     345788999999998888763    4589999999999999999999752 3567899999654  33


Q ss_pred             CCeecEEECCCCCC
Q psy12894        110 NESVPVIIHFSVSN  123 (124)
Q Consensus       110 ~~~~~vi~Hp~y~~  123 (124)
                      ....++++||+|+.
T Consensus       523 ~~v~~i~~Hp~y~~  536 (741)
T 3hrz_D          523 LEIEVVLFHPNYNI  536 (741)
T ss_dssp             EEEEEEEECTTCCT
T ss_pred             EEEEEEEECCCCCc
Confidence            34667999999973

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=99.62  E-value=1.2e-16  Score=109.55  Aligned_cols=73  Identities=25%  Similarity=0.365  Sum_probs=55.6

Q ss_pred             CCceeCCEEcCCCCCce--EEEEEeCCceeEEEEEecCCEEEecccccCCCCCceE----EEEEceeecCCCCC---eec
Q psy12894         44 NQRIVGGNVTKLHEFPW--IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEI----KVTLGEHDRLSKNE---SVP  114 (124)
Q Consensus        44 ~~ri~gg~~~~~~~~Pw--~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~----~V~~G~~~~~~~~~---~~~  114 (124)
                      ..||++|.     ++||  ++.+. .+.++|+|+||+++||||||||+.......+    .|++|.++......   ..+
T Consensus         8 ~~rI~~g~-----~~P~~~~~~~~-~~~~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~   81 (215)
T 1p3c_A            8 RTKVANTR-----VAPYNSIAYIT-FGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTE   81 (215)
T ss_dssp             CEECSCTT-----STTGGGEEEEE-CSSCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEE
T ss_pred             CEEecCCC-----cCCCeEEEEEE-cCCceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEE
Confidence            45788776     4688  45554 4568999999999999999999976444555    99999987655443   345


Q ss_pred             EEECCCCC
Q psy12894        115 VIIHFSVS  122 (124)
Q Consensus       115 vi~Hp~y~  122 (124)
                      +++||+|+
T Consensus        82 i~~hp~y~   89 (215)
T 1p3c_A           82 FYVPSGYI   89 (215)
T ss_dssp             EECCHHHH
T ss_pred             EEeCCccc
Confidence            99999993

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=99.60  E-value=9e-16  Score=106.03  Aligned_cols=69  Identities=20%  Similarity=0.329  Sum_probs=52.5

Q ss_pred             CCCCCceEEEEEeC---CceeEEEEEec---CCEEEecccccCCCC----CceEEEEEceeecCCCC---CeecEEECCC
Q psy12894         54 KLHEFPWIAALTKK---GKFYCGATLIA---KRHVLTAAHCIEGVN----PKEIKVTLGEHDRLSKN---ESVPVIIHFS  120 (124)
Q Consensus        54 ~~~~~Pw~v~l~~~---~~~~CgGsLi~---~~~vlTaahC~~~~~----~~~~~V~~G~~~~~~~~---~~~~vi~Hp~  120 (124)
                      .+++|||++.|...   +.++|||+||+   ++||||||||+....    ...+.|++|.++.....   ...++++||+
T Consensus         2 ~~~~~p~~g~l~~~~~~~~~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~   81 (218)
T 3cp7_A            2 NPADSPHIGKVFFSTNQGDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAE   81 (218)
T ss_dssp             -CTTCTTEEEEEEEETTEEEEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEEEEECHH
T ss_pred             CCCCCceEEEEEEEcCCCCeEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEEEEECcc
Confidence            35789999999763   35899999999   999999999996432    24688899987644322   2446999999


Q ss_pred             CC
Q psy12894        121 VS  122 (124)
Q Consensus       121 y~  122 (124)
                      |+
T Consensus        82 y~   83 (218)
T 3cp7_A           82 WA   83 (218)
T ss_dssp             HH
T ss_pred             cc
Confidence            85

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=99.29  E-value=2e-12  Score=90.51  Aligned_cols=67  Identities=19%  Similarity=0.144  Sum_probs=49.0

Q ss_pred             cCCCCCceEEEE--EeCCceeEEEEEecCCEEEecccccCCCCC--ceEEEEEceeecCC---------CCCeecEEECC
Q psy12894         53 TKLHEFPWIAAL--TKKGKFYCGATLIAKRHVLTAAHCIEGVNP--KEIKVTLGEHDRLS---------KNESVPVIIHF  119 (124)
Q Consensus        53 ~~~~~~Pw~v~l--~~~~~~~CgGsLi~~~~vlTaahC~~~~~~--~~~~V~~G~~~~~~---------~~~~~~vi~Hp  119 (124)
                      +..+++||++.+  ...+.++|+|+||+++||||||||+.....  ..+.++.|..+...         ......++.||
T Consensus        29 ~~~~~~P~~~~~~i~~~~~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp  108 (246)
T 1qtf_A           29 TDNARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESP  108 (246)
T ss_dssp             SCCSSTTGGGEEEEEETTTEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCT
T ss_pred             hhcCcCchhcEEEEEECCCceEEEEEEECCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCC
Confidence            567789999654  345678999999999999999999975333  46888888765432         11223478899

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=99.28  E-value=2.2e-12  Score=89.94  Aligned_cols=68  Identities=19%  Similarity=0.188  Sum_probs=47.0

Q ss_pred             cCCCCCceEEEE--EeCCceeEEEEEecCCEEEecccccCCCCC--ceEEEEEceeecCCCC--------CeecEEECCC
Q psy12894         53 TKLHEFPWIAAL--TKKGKFYCGATLIAKRHVLTAAHCIEGVNP--KEIKVTLGEHDRLSKN--------ESVPVIIHFS  120 (124)
Q Consensus        53 ~~~~~~Pw~v~l--~~~~~~~CgGsLi~~~~vlTaahC~~~~~~--~~~~V~~G~~~~~~~~--------~~~~vi~Hp~  120 (124)
                      +..++|||++.+  ...+.++|+|+||+++||||||||+.....  ..+.+..|..+.....        ....++.|| 
T Consensus        36 a~~~~~p~~~~v~i~~~~~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~-  114 (242)
T 1agj_A           36 KDRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEP-  114 (242)
T ss_dssp             TGGGSTTGGGEEEEEETTTEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCT-
T ss_pred             ccccccccceEEEEEECCCccEEEEEEeCCEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCC-
Confidence            566789998544  445668999999999999999999975332  3455555876543221        123377888 


Q ss_pred             C
Q psy12894        121 V  121 (124)
Q Consensus       121 y  121 (124)
                      |
T Consensus       115 ~  115 (242)
T 1agj_A          115 F  115 (242)
T ss_dssp             T
T ss_pred             C
Confidence            5

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=99.18  E-value=1.7e-11  Score=86.91  Aligned_cols=68  Identities=13%  Similarity=0.221  Sum_probs=47.7

Q ss_pred             cCCCCCceEEE--EEe---CCceeEEEEEecCCEEEecccccCCCC--CceEEEEEceeecCCCC----CeecEEECCC
Q psy12894         53 TKLHEFPWIAA--LTK---KGKFYCGATLIAKRHVLTAAHCIEGVN--PKEIKVTLGEHDRLSKN----ESVPVIIHFS  120 (124)
Q Consensus        53 ~~~~~~Pw~v~--l~~---~~~~~CgGsLi~~~~vlTaahC~~~~~--~~~~~V~~G~~~~~~~~----~~~~vi~Hp~  120 (124)
                      +..++|||++.  +..   .+.++|+|+||+++||||||||+....  ...+.|++|.++.....    ...+++.|+.
T Consensus        12 ~~~~~~P~~~~v~l~~~~~~g~~~CgG~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~   90 (268)
T 1wcz_A           12 TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSG   90 (268)
T ss_dssp             SCTTSGGGTTEEEEEEEC-CCEEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSS
T ss_pred             cCCCCCCccEEEEEEEEcCCCCEEEEEEEEECCEEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCC
Confidence            45678888764  443   356899999999999999999997532  24589999987643211    1234777763

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=99.15  E-value=2.8e-11  Score=86.05  Aligned_cols=68  Identities=13%  Similarity=0.221  Sum_probs=47.2

Q ss_pred             cCCCCCceEEE--EEe---CCceeEEEEEecCCEEEecccccCCCC--CceEEEEEceeecCCCC----CeecEEECCC
Q psy12894         53 TKLHEFPWIAA--LTK---KGKFYCGATLIAKRHVLTAAHCIEGVN--PKEIKVTLGEHDRLSKN----ESVPVIIHFS  120 (124)
Q Consensus        53 ~~~~~~Pw~v~--l~~---~~~~~CgGsLi~~~~vlTaahC~~~~~--~~~~~V~~G~~~~~~~~----~~~~vi~Hp~  120 (124)
                      +..++|||++.  +..   .+.++|+|+||+++||||||||+....  ...+.|++|.++.....    ...+++.|+.
T Consensus        12 ~~~~~~P~~~~v~i~~~~~~~~~~C~G~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~   90 (274)
T 2o8l_A           12 TDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSG   90 (274)
T ss_dssp             SSTTSGGGTTEEEEEEEETTEEEEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSS
T ss_pred             cCCCCCCcceEEEEEEEcCCCCEEEEEEEEECCEEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCC
Confidence            45667888754  433   245899999999999999999996532  24589999987643211    1334778863

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=99.01  E-value=6.1e-11  Score=80.24  Aligned_cols=37  Identities=14%  Similarity=0.232  Sum_probs=32.2

Q ss_pred             EcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCC
Q psy12894         52 VTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG   91 (124)
Q Consensus        52 ~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~   91 (124)
                      .+.+++|||++++.   .+.|+|+||+++||||||||+..
T Consensus         7 i~~~~~~P~~v~~~---~~~c~G~lI~~~~VLTaaHcv~~   43 (200)
T 2w7s_A            7 ITDATKEPYNSVVA---FVGGTGVVVGKNTIVTNKHIAKS   43 (200)
T ss_dssp             ESCTTSTTGGGEEE---ETTEEEEEEETTEEEECHHHHHH
T ss_pred             eeccccCCcccccc---cceEEEEEEECCEEEEChhhcCC
Confidence            46788999999885   35799999999999999999853

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=99.01  E-value=2.5e-10  Score=81.11  Aligned_cols=43  Identities=30%  Similarity=0.456  Sum_probs=33.1

Q ss_pred             EEEEeCCceeEEEEEecC------CEEEecccccCCC--CCceEEEEEcee
Q psy12894         62 AALTKKGKFYCGATLIAK------RHVLTAAHCIEGV--NPKEIKVTLGEH  104 (124)
Q Consensus        62 v~l~~~~~~~CgGsLi~~------~~vlTaahC~~~~--~~~~~~V~~G~~  104 (124)
                      +.+...+.++|||+||++      +||||||||+...  ....++|++|..
T Consensus        26 ~rl~~~g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~   76 (268)
T 1arb_A           26 GAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQ   76 (268)
T ss_dssp             EEEEETTEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCC
T ss_pred             EEEEeCCccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCC
Confidence            456667779999999998      6999999998642  234578888753

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=98.97  E-value=2.2e-10  Score=77.47  Aligned_cols=38  Identities=18%  Similarity=0.297  Sum_probs=32.1

Q ss_pred             EcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC
Q psy12894         52 VTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV   92 (124)
Q Consensus        52 ~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~   92 (124)
                      .+.+++|||++.+..   +.|+|+||+++||||||||+...
T Consensus         7 ~~~~~~~P~~~~~~~---~~c~G~lI~~~~VLTaaHcv~~~   44 (204)
T 2vid_A            7 VKDTNIFPYTGVVAF---KSATGFVVGKNTILTNKHVSKNY   44 (204)
T ss_dssp             CSCTTSTTGGGEEEC---SSCEEEEEETTEEEECHHHHTTC
T ss_pred             eccCCcCchhheEEe---eeEEEEEEECCEEEEChhHCCCc
Confidence            467789999996642   57999999999999999999753

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=98.79  E-value=8.1e-10  Score=75.47  Aligned_cols=48  Identities=15%  Similarity=0.227  Sum_probs=37.1

Q ss_pred             cCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCC-CceEEEEEce
Q psy12894         53 TKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN-PKEIKVTLGE  103 (124)
Q Consensus        53 ~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~-~~~~~V~~G~  103 (124)
                      +.+++|||++++.   .+.|+|+||+++||||||||+.... ...+.|.+|.
T Consensus         9 ~~~~~~P~~v~~~---~~~c~G~lI~~~~VLTaaHcv~~~~~~~~i~v~~~~   57 (210)
T 2as9_A            9 KDTNNFPYNGVVS---FKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNG   57 (210)
T ss_dssp             SCTTSTTGGGEEE---CSSCEEEEEETTEEEECHHHHHHCCTTCEEEESCCG
T ss_pred             ecCCcCCeEEEEE---eeeEEEEEEeCCEEEECHhHCCccCCCCEEEEEeCc
Confidence            4577899999764   3589999999999999999986432 2356666654

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=98.19  E-value=2e-06  Score=59.45  Aligned_cols=59  Identities=22%  Similarity=0.276  Sum_probs=41.1

Q ss_pred             CceEEEEEeCC-----ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCCeecEEECCCCC
Q psy12894         58 FPWIAALTKKG-----KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIHFSVS  122 (124)
Q Consensus        58 ~Pw~v~l~~~~-----~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~~~~vi~Hp~y~  122 (124)
                      .|..|.+....     ...++|+||++.||||+|||+.+  ...+.|.++..    ......+..||++|
T Consensus        41 ~~svV~I~~~~~~~~~~~~GsG~iI~~~~VlTaaH~v~~--~~~~~V~~~~~----~~~~~~v~~~~~~D  104 (237)
T 3k6y_A           41 EPSVVKIRSLAPRCQKVLEGTGFVISPDRVMTNAHVVAG--SNNVTVYAGDK----PFEATVVSYDPSVD  104 (237)
T ss_dssp             GGGEEEEEEEEGGGTEEEEEEEEEEETTEEEECGGGTTT--CSEEEEEETTE----EEECEEEEEETTTT
T ss_pred             cCCEEEEEEEecCCCcceeEEEEEEECCEEEECHHHcCC--CceEEEEECCc----EEEEEEEEEcCCCC
Confidence            46777775532     45799999999999999999973  45788888762    11122356677665

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=97.80  E-value=2.2e-05  Score=56.69  Aligned_cols=46  Identities=20%  Similarity=0.317  Sum_probs=34.5

Q ss_pred             CceEEEEEeC---CceeEEEEEecC-CEEEecccccCCCC-------CceEEEEEce
Q psy12894         58 FPWIAALTKK---GKFYCGATLIAK-RHVLTAAHCIEGVN-------PKEIKVTLGE  103 (124)
Q Consensus        58 ~Pw~v~l~~~---~~~~CgGsLi~~-~~vlTaahC~~~~~-------~~~~~V~~G~  103 (124)
                      .|++|.+...   ....|+|+||++ .||||+|||+....       ...+.|+++.
T Consensus        16 ~~svV~I~~~~~~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~   72 (324)
T 1y8t_A           16 VPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD   72 (324)
T ss_dssp             GGGEEEEEEEC----CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETT
T ss_pred             cCcEEEEEEEccCCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCC
Confidence            6888888752   457899999997 79999999997532       2367888864

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=97.63  E-value=8e-05  Score=51.37  Aligned_cols=31  Identities=19%  Similarity=0.327  Sum_probs=25.1

Q ss_pred             eeEEEEEecCC-EEEecccccCCCCCceEEEEEc
Q psy12894         70 FYCGATLIAKR-HVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        70 ~~CgGsLi~~~-~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ..++|+||+++ ||||+|||+.+  ...+.|.++
T Consensus        63 ~~GSG~iI~~~G~VLTaaHvv~~--~~~i~V~~~   94 (231)
T 3tjo_A           63 ASGSGFIVSEDGLIVTNAHVVTN--KHRVKVELK   94 (231)
T ss_dssp             EEEEEEECSTTCEEEEETTTCCS--SSEEEEECT
T ss_pred             ceEEEEEEeCCCEEEEchhcccC--CceEEEEcC
Confidence            46999999998 99999999974  355666664

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=97.36  E-value=0.0004  Score=50.27  Aligned_cols=48  Identities=15%  Similarity=0.165  Sum_probs=32.5

Q ss_pred             eeEEEEEecCC-EEEecccccCCCCCceEEEEEceeecCCCCCeecEEECCCCC
Q psy12894         70 FYCGATLIAKR-HVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVIIHFSVS  122 (124)
Q Consensus        70 ~~CgGsLi~~~-~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~~~~vi~Hp~y~  122 (124)
                      ..++|+||+++ ||||+|||+..  ...+.|.++...   ......+..||.+|
T Consensus        46 ~~GSG~iI~~~G~ILTaaHvv~~--~~~i~V~~~~g~---~~~a~~~~~d~~~D   94 (332)
T 3num_A           46 ASGSGFIVSEDGLIVTNAHVVTN--KHRVKVELKNGA---TYEAKIKDVDEKAD   94 (332)
T ss_dssp             EEEEEEEEETTTEEEECTTTCCT--TSEEEEEETTSC---EEEEEEEEEETTTT
T ss_pred             eeEEEEEEeCCCEEEEChHHcCC--CCEEEEEECCCC---EEEEEEEEecCCCC
Confidence            46899999998 99999999974  456777775321   11122256677665

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=97.24  E-value=0.00012  Score=50.85  Aligned_cols=33  Identities=21%  Similarity=0.298  Sum_probs=25.9

Q ss_pred             ceeEEEEEecCC-EEEecccccCCCCCceEEEEEce
Q psy12894         69 KFYCGATLIAKR-HVLTAAHCIEGVNPKEIKVTLGE  103 (124)
Q Consensus        69 ~~~CgGsLi~~~-~vlTaahC~~~~~~~~~~V~~G~  103 (124)
                      .+.|+|+||++. ||||+|||+..  ...+.|.+++
T Consensus        55 ~~~gsG~iI~~~g~ILTnaHvv~~--~~~i~V~~~~   88 (239)
T 1l1j_A           55 ASLGSGFIFDPEGYILTNYHVVGG--ADNITVTMLD   88 (239)
T ss_dssp             EEEEEEEEEETTTEEEEEHHHHSS--CSSCEEECTT
T ss_pred             CceEEEEEEeCCCEEEEChHHhCC--CCEEEEEECC
Confidence            468999999985 99999999974  3456676653

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=97.08  E-value=0.00056  Score=47.16  Aligned_cols=31  Identities=23%  Similarity=0.386  Sum_probs=24.7

Q ss_pred             eeEEEEEecCC-EEEecccccCCCCCceEEEEEc
Q psy12894         70 FYCGATLIAKR-HVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        70 ~~CgGsLi~~~-~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ..+.|.+|+++ ||||+|||+..  ...+.|.++
T Consensus        53 ~~GsG~ii~~~G~IlTaaHvv~~--~~~~~V~~~   84 (237)
T 3lgi_A           53 TLGSGVIMDQRGYIITNKHVIND--ADQIIVALQ   84 (237)
T ss_dssp             EEEEEEEEETTTEEEEEHHHHTT--CSEEEEECT
T ss_pred             eEEEEEEEeCCCEEEEeeeecCC--CCEEEEEeC
Confidence            47999999998 99999999974  345666654

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=97.04  E-value=0.00041  Score=49.91  Aligned_cols=32  Identities=22%  Similarity=0.402  Sum_probs=25.2

Q ss_pred             ceeEEEEEecCC-EEEecccccCCCCCceEEEEEc
Q psy12894         69 KFYCGATLIAKR-HVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        69 ~~~CgGsLi~~~-~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ...|+|.+|+++ ||||+|||+..  ...+.|.++
T Consensus        41 ~~~gsG~iI~~~G~IlT~aHvv~~--~~~i~V~~~   73 (318)
T 1te0_A           41 RTLGSGVIMDQRGYIITNKHVIND--ADQIIVALQ   73 (318)
T ss_dssp             EEEEEEEECSTTCEEEEEHHHHTT--CSEEEEECT
T ss_pred             CccEEEEEEeCCCEEEECHHHcCC--CCEEEEEeC
Confidence            368999999987 99999999974  345666654

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=96.94  E-value=0.00051  Score=49.62  Aligned_cols=31  Identities=19%  Similarity=0.289  Sum_probs=25.3

Q ss_pred             eeEEEEEecCC-EEEecccccCCCCCceEEEEEc
Q psy12894         70 FYCGATLIAKR-HVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        70 ~~CgGsLi~~~-~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ..|+|++|+++ ||||+|||+.+  ...+.|+++
T Consensus        47 ~~gsG~iI~~~G~IlT~aHvv~~--~~~i~V~~~   78 (325)
T 1lcy_A           47 SNGSGFVVAADGLIVTNAHVVAD--RRRVRVRLL   78 (325)
T ss_dssp             EEEEEEEEETTTEEEECHHHHTT--CSEEEEECT
T ss_pred             ccEEEEEEeCCCEEEECHHHcCC--CCEEEEEeC
Confidence            67999999998 99999999974  345666664

>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}

Probab=96.58  E-value=0.0016  Score=45.29  Aligned_cols=31  Identities=26%  Similarity=0.337  Sum_probs=21.9

Q ss_pred             eeEEEEEecCC--EEEecccccCCCCCceEEEEEc
Q psy12894         70 FYCGATLIAKR--HVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        70 ~~CgGsLi~~~--~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ..+.|.+|+++  ||||++||+..  ...+.|.++
T Consensus        63 ~~GSGfiI~~~~G~IlTnaHvv~~--a~~i~V~~~   95 (245)
T 3sti_A           63 GLGSGVIINASKGYVLTNNHVINQ--AQKISIQLN   95 (245)
T ss_dssp             -CCEEEEEETTTTEEEECGGGC------CEEEECT
T ss_pred             ceEEEEEEeCCCCEEEEcHHHhCC--CCEEEEEEC
Confidence            46899999997  99999999974  345666654

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=96.11  E-value=0.0013  Score=43.35  Aligned_cols=23  Identities=30%  Similarity=0.468  Sum_probs=19.5

Q ss_pred             ceeEE-EEEec---CCEEEecccccCC
Q psy12894         69 KFYCG-ATLIA---KRHVLTAAHCIEG   91 (124)
Q Consensus        69 ~~~Cg-GsLi~---~~~vlTaahC~~~   91 (124)
                      ...|+ |.+++   ++||||||||+..
T Consensus        11 ~~~ct~G~~v~~~~~~~vlTaaHc~~~   37 (181)
T 2sga_A           11 GSRCSLGFNVSVNGVAHALTAGHCTNI   37 (181)
T ss_dssp             TEEEECCEEEEETTEEEEEECHHHHTT
T ss_pred             CCcEeccEEEEECCceEEEECcccCCC
Confidence            35799 99998   6899999999863

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=96.08  E-value=0.0035  Score=45.60  Aligned_cols=31  Identities=29%  Similarity=0.441  Sum_probs=24.6

Q ss_pred             eeEEEEEecCC-EEEecccccCCCCCceEEEEEc
Q psy12894         70 FYCGATLIAKR-HVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        70 ~~CgGsLi~~~-~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ..++|++|+++ ||||+|||+.+  ...+.|.++
T Consensus        53 g~GSG~iI~~~G~IlT~aHvv~~--~~~i~V~~~   84 (348)
T 3qo6_A           53 GSGSGFVWDKQGHIVTNYHVIRG--ASDLRVTLA   84 (348)
T ss_dssp             EEEEEEEEETTTEEEECHHHHTT--CSEEEEECT
T ss_pred             ceEEEEEEeCCCEEEECHHHhCC--CcEEEEEEC
Confidence            46999999998 99999999974  345666654

>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}

Probab=95.82  E-value=0.005  Score=44.86  Aligned_cols=32  Identities=25%  Similarity=0.339  Sum_probs=24.6

Q ss_pred             ceeEEEEEecCC--EEEecccccCCCCCceEEEEEc
Q psy12894         69 KFYCGATLIAKR--HVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        69 ~~~CgGsLi~~~--~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ...+.|.+|++.  ||||++||+..  ...+.|.+.
T Consensus        62 ~~~GSGfiI~~~~G~IlTnaHVv~~--~~~i~V~~~   95 (345)
T 3stj_A           62 EGLGSGVIINASKGYVLTNNHVINQ--AQKISIQLN   95 (345)
T ss_dssp             EEEEEEEEEETTTTEEEECHHHHTT--EEEEEEECT
T ss_pred             ceeEEEEEEECCCCEEEEChHHhCC--CCEEEEEeC
Confidence            357999999987  99999999974  345556553

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=95.06  E-value=0.0065  Score=40.04  Aligned_cols=23  Identities=30%  Similarity=0.502  Sum_probs=18.5

Q ss_pred             ceeEE-EEEec---CCEEEecccccCC
Q psy12894         69 KFYCG-ATLIA---KRHVLTAAHCIEG   91 (124)
Q Consensus        69 ~~~Cg-GsLi~---~~~vlTaahC~~~   91 (124)
                      ...|+ |.++.   ++||||||||+..
T Consensus        11 ~~~ct~Gf~v~~~~~~~ilTaaHcv~~   37 (185)
T 2qa9_E           11 TGRCSLGFNVRSGSTYYFLTAGHCTDG   37 (185)
T ss_dssp             SCEEECCEEEEETTEEEEEECHHHHTT
T ss_pred             CCcEeccEEEEECCceEEEECcccCCC
Confidence            35788 88876   4799999999864

>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A

Probab=94.61  E-value=0.046  Score=40.93  Aligned_cols=32  Identities=25%  Similarity=0.339  Sum_probs=25.2

Q ss_pred             ceeEEEEEecCC--EEEecccccCCCCCceEEEEEc
Q psy12894         69 KFYCGATLIAKR--HVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        69 ~~~CgGsLi~~~--~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ...+.|.+|++.  ||||++||+..  ...+.|.+.
T Consensus        62 ~~~GSGfii~~~~G~IlTn~Hvv~~--a~~i~V~~~   95 (436)
T 4a8c_A           62 EGLGSGVIINASKGYVLTNNHVINQ--AQKISIQLN   95 (436)
T ss_pred             ceEEEEEEEECCCCEEEECHHHhCC--CCEEEEEeC
Confidence            357999999986  99999999974  345666663

>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}

Probab=92.97  E-value=0.086  Score=35.32  Aligned_cols=31  Identities=16%  Similarity=0.050  Sum_probs=25.2

Q ss_pred             EEEEEeCCceeEEEEEe---cCCEEEecccccCC
Q psy12894         61 IAALTKKGKFYCGATLI---AKRHVLTAAHCIEG   91 (124)
Q Consensus        61 ~v~l~~~~~~~CgGsLi---~~~~vlTaahC~~~   91 (124)
                      .+.+.....|+|.|+.+   .+.++|||+||+..
T Consensus        18 vv~l~~~d~h~G~g~~V~~~G~~~LlTA~Hv~~~   51 (191)
T 1zyo_A           18 LVAIKSGPTTIGFGCRTKIDGEDCLLTAHHVWCN   51 (191)
T ss_dssp             EEEEEETTEEEEEEEEEEC--CEEEEECHHHHTS
T ss_pred             EEEEEeCCeEEEEEEEEEECCCcEEEEChhhCcC
Confidence            66776666899999999   66899999999854

>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}

Probab=92.65  E-value=0.2  Score=32.56  Aligned_cols=31  Identities=16%  Similarity=0.113  Sum_probs=23.8

Q ss_pred             CceeEEEEEecCCEEEecccccCCCCCceEEEEE
Q psy12894         68 GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTL  101 (124)
Q Consensus        68 ~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~  101 (124)
                      ....+.|.+| +.+|||++||+.+  .....|.+
T Consensus        19 ~~~~GSGfii-~g~IlTn~HVV~~--~~~i~V~~   49 (163)
T 2w5e_A           19 PEGKGTGFFS-GNDIVTAAHVVGN--NTFVNVCY   49 (163)
T ss_dssp             TTEEEEEEEE-TTEEEEEHHHHTT--CSEEEEEE
T ss_pred             CceeEEEEEE-CCEEEecHHHhCC--CceEEEEE
Confidence            3457899999 8999999999974  34555655

>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A

Probab=92.63  E-value=0.065  Score=40.36  Aligned_cols=31  Identities=26%  Similarity=0.297  Sum_probs=23.9

Q ss_pred             eeEEEEEecC--CEEEecccccCCCCCceEEEEEc
Q psy12894         70 FYCGATLIAK--RHVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        70 ~~CgGsLi~~--~~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ..++|.+|++  .||||++||+..  ...+.|.+.
T Consensus        77 ~~GSGfiI~~~~G~IlTn~HVv~~--a~~i~V~~~  109 (451)
T 3pv2_A           77 SIGSGVIIDPNNGVIITNDHVIRN--ASLITVTLQ  109 (451)
T ss_dssp             EEEEEEEEETTTTEEEECHHHHTT--EEEEEEECT
T ss_pred             eeEEEEEEECCCCEEEEChHHhCC--CCEEEEEEc
Confidence            4689999996  599999999974  345666654

>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A

Probab=89.72  E-value=0.21  Score=37.55  Aligned_cols=31  Identities=26%  Similarity=0.356  Sum_probs=23.9

Q ss_pred             eeEEEEEecCC--EEEecccccCCCCCceEEEEEc
Q psy12894         70 FYCGATLIAKR--HVLTAAHCIEGVNPKEIKVTLG  102 (124)
Q Consensus        70 ~~CgGsLi~~~--~vlTaahC~~~~~~~~~~V~~G  102 (124)
                      ..|+|.+|++.  ||||++||+..  ...+.|.+.
T Consensus        86 ~~GSG~ii~~~~g~IlTn~HVv~~--a~~i~V~~~  118 (448)
T 1ky9_A           86 ALGSGVIIDADKGYVVTNNHVVDN--ATVIKVQLS  118 (448)
T ss_dssp             EEEEEEEEETTTTEEEEEHHHHTT--EEEEEEEET
T ss_pred             cEEEEEEEECCCCEEEEChHHhCC--CCEEEEEEC
Confidence            57999999874  99999999974  245566553

>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}

Probab=88.28  E-value=0.45  Score=31.55  Aligned_cols=25  Identities=24%  Similarity=0.453  Sum_probs=18.2

Q ss_pred             CCceeEEEEEecCCEEEecccccCC
Q psy12894         67 KGKFYCGATLIAKRHVLTAAHCIEG   91 (124)
Q Consensus        67 ~~~~~CgGsLi~~~~vlTaahC~~~   91 (124)
                      .+...|+...+-..++||++||...
T Consensus        12 ~~~~~CT~Gf~~~~~ilTa~Hc~~~   36 (189)
T 2ea3_A           12 GGRSRCSIGFAVNGGFITAGHCGRT   36 (189)
T ss_dssp             TTEEEEECCEEETTEEEECGGGCCT
T ss_pred             CCCCCCccCEEccCeEEEchhcCCC
Confidence            3446798655555699999999864

>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1

Probab=81.17  E-value=0.54  Score=30.94  Aligned_cols=24  Identities=38%  Similarity=0.556  Sum_probs=18.5

Q ss_pred             CceeEE-EEEecC---CEEEecccccCC
Q psy12894         68 GKFYCG-ATLIAK---RHVLTAAHCIEG   91 (124)
Q Consensus        68 ~~~~Cg-GsLi~~---~~vlTaahC~~~   91 (124)
                      +...|+ |.++.+   .++||++||+..
T Consensus        10 ~~~~CT~Gfiv~~~g~~~ilT~~Hv~~~   37 (187)
T 1hpg_A           10 GGSRCSAAFNVTKGGARYFVTAGHCTNI   37 (187)
T ss_dssp             TTEEEECCEEEEETTEEEEEECHHHHTT
T ss_pred             CCCcCcceEEEEECCeeEEEECcccCCC
Confidence            345788 777766   499999999864

>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...

Probab=80.55  E-value=1.4  Score=29.38  Aligned_cols=22  Identities=23%  Similarity=0.454  Sum_probs=16.4

Q ss_pred             eeEE-EEEecC---CEEEecccccCC
Q psy12894         70 FYCG-ATLIAK---RHVLTAAHCIEG   91 (124)
Q Consensus        70 ~~Cg-GsLi~~---~~vlTaahC~~~   91 (124)
                      ..|+ |.++.+   .++||++||...
T Consensus        15 ~~CT~Gf~v~~~~~~~ilTa~Hc~~~   40 (198)
T 2h5c_A           15 SLCSVGFSVTRGATKGFVTAGHCGTV   40 (198)
T ss_dssp             EEEECCEEEEETTEEEEEECGGGCCT
T ss_pred             CCCCcCEEEecCCeeEEEECcccCCC
Confidence            5677 556654   599999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	124
d1mzaa_	240	b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [Ta	8e-20
d2bz6h1	254	b.47.1.2 (H:16-257) Coagulation factor VIIa {Human	6e-19
d1rfna_	235	b.47.1.2 (A:) Coagulation factor IXa, protease dom	8e-18
d1z8ga1	255	b.47.1.2 (A:163-417) Hepsin, catalytic domain {Hum	8e-18
d1bioa_	228	b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxI	2e-17
d1azza_	226	b.47.1.2 (A:) Crab collagenase {Atlantic sand fidd	2e-17
d1ekbb_	235	b.47.1.2 (B:) Enteropeptidase (enterokinase light	2e-17
d1gdna_	224	b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxyspo	3e-17
d1gvza_	237	b.47.1.2 (A:) Prostate specific antigen (PSA kalli	3e-17
d1op0a_	234	b.47.1.2 (A:) Venom serine protease {Hundred-pace	4e-17
d1orfa_	232	b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [Ta	4e-17
d1lo6a_	221	b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [	4e-17
d2z7fe1	218	b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens)	5e-17
d1eq9a_	222	b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Re	5e-17
g2pka.1	232	b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [T	5e-17
d1a7sa_	225	b.47.1.2 (A:) Heparin binding protein, HBP {Human	6e-17
g1fiw.1	274	b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries)	7e-17
d1si5h_	234	b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human	1e-16
d1ao5a_	237	b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus)	1e-16
d1rjxb_	247	b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Hum	2e-16
d1npma_	225	b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [Tax	2e-16
g1rtf.1	260	b.47.1.2 (A:,B:) Two-chain tissue plasminogen acti	3e-16
d1autc_	240	b.47.1.2 (C:) Activated protein c (autoprothrombin	5e-16
d1q3xa1	242	b.47.1.2 (A:445-686) Mannan-binding lectin serine	7e-16
g1h8d.1	289	b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [T	9e-16
d2fpza1	243	b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sap	1e-15
d1m9ua_	241	b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [Tax	2e-15
d2p3ub1	233	b.47.1.2 (B:16-243) Coagulation factor Xa, proteas	2e-15
g1gj7.1	256	b.47.1.2 (A:,B:) Urokinase-type plasminogen activa	2e-15
d1j16a_	223	b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicu	2e-15
d1xx9a_	237	b.47.1.2 (A:) Coagulation factor XI {Human (Homo s	3e-15
d1eaxa_	241	b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapien	3e-15
d2qy0b1	240	b.47.1.2 (B:447-686) Complement C1R protease, cata	4e-15
d1elta_	236	b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxI	4e-15
d1tona_	235	b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 1	5e-15
d1hj8a_	222	b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon	5e-15
d1rrka1	287	b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens	6e-15
d1fxya_	228	b.47.1.2 (A:) Coagulation factor Xa-trypsin chimer	7e-15
d1os8a_	223	b.47.1.1 (A:) Trypsin {Streptomyces griseus, strai	8e-15
d1hj9a_	223	b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [Tax	8e-15
g1gg6.1	238	b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(oge	1e-14
d1elva1	259	b.47.1.2 (A:410-668) Complement C1S protease, cata	1e-14
d1brup_	241	b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9	9e-14
d1fq3a_	227	b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [Ta	9e-14
d1gvkb_	240	b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9	1e-13
d1sgfa_	228	b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus	1e-13
d2f91a1	237	b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed c	1e-13
d1fuja_	221	b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapie	1e-13
d1nn6a_	224	b.47.1.2 (A:) Chymase (mast cell protease I) {Huma	2e-13
d3rp2a_	224	b.47.1.2 (A:) Chymase II (mast cell proteinase II)	5e-13
d1t32a1	224	b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapie	8e-13
d2hlca_	230	b.47.1.2 (A:) HL collagenase {Common cattle grub (	1e-12
d1eufa_	224	b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId:	2e-12
d1fi8a_	227	b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus)	3e-12
d1pytd_	251	b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Co	1e-11
d1fona_	232	b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III	3e-11
d1p3ca_	215	b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus int	2e-09
d2o8la1	216	b.47.1.1 (A:1-216) V8 protease {Staphylococcus aur	2e-06
d1arba_	263	b.47.1.1 (A:) Achromobacter protease {Achromobacte	3e-06
d1agja_	242	b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A	3e-05
d1qtfa_	246	b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus	3e-04

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (194), Expect = 8e-20
 Identities = 23/75 (30%), Positives = 33/75 (44%)

Query: 46  RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHD 105
            I+GG     H  P++A++   G   CG  LI  + VLTAAHC       +    +    
Sbjct: 2   EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAH 61

Query: 106 RLSKNESVPVIIHFS 120
            LSKNE+    +   
Sbjct: 62  SLSKNEASKQTLEIK 76

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (188), Expect = 6e-19
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHD 105
           IVGG V    E PW   L   G   CG TLI    V++AAHC + + N + +   LGEHD
Sbjct: 1   IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHD 60

Query: 106 RLSKN 110
               +
Sbjct: 61  LSEHD 65

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (180), Expect = 8e-18
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           +VGG   K  +FPW   L  K   +CG +++ ++ ++TAAHC+E     +I V  GEH+ 
Sbjct: 1   VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVE--TGVKITVVAGEHNI 58

Query: 107 LSKNESVPVIIHFSV 121
                +        +
Sbjct: 59  EETEHTEQKRNVIRI 73

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 255

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (181), Expect = 8e-18
 Identities = 21/48 (43%), Positives = 26/48 (54%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNP 94
          IVGG  T L  +PW  +L   G   CG +L++   VLTAAHC    N 
Sbjct: 1  IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNR 48

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GG   + H  P++A++   G   CG  L+A++ VL+AAHC+E     +++V LG H  
Sbjct: 1   ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSL 60

Query: 107 LSKNE 111
                
Sbjct: 61  SQPEP 65

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]} Length = 226

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG     + +P  AAL     ++CG +LI+   +LTAAHC++G     + V LG H+ 
Sbjct: 1   IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDGAGF--VDVVLGAHNI 58

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 18/47 (38%), Positives = 32/47 (68%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
          IVGG+ ++   +PW+ AL    +  CGA+L+++  +++AAHC+ G N
Sbjct: 1  IVGGSDSREGAWPWVVALYFDDQQVCGASLVSRDWLVSAAHCVYGRN 47

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 22/69 (31%), Positives = 36/69 (52%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG      +FP+I ++++ G  +CG +L+    VLTAAHC+ G      ++  G   R
Sbjct: 1   IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSR 60

Query: 107 LSKNESVPV 115
            S   +  +
Sbjct: 61  TSGGITSSL 69

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 19/45 (42%), Positives = 26/45 (57%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG 91
          I+GG   + H  PW  A+  +G F CG  L+  + VLTAAHC+  
Sbjct: 1  IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMSD 45

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

 Score = 72.1 bits (175), Expect = 4e-17
 Identities = 18/53 (33%), Positives = 28/53 (52%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKV 99
          ++GGN   ++E  ++ A      F+CG TLI    V+TAAHC       ++ V
Sbjct: 1  VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHCDSTDFQMQLGV 53

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 23/73 (31%), Positives = 30/73 (41%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           I+GGN    H  P++  L+   K  C   LIAK  VLTAAHC      + I         
Sbjct: 1   IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRSQVILGAHSITRE 60

Query: 107 LSKNESVPVIIHF 119
               + + V   F
Sbjct: 61  EPTKQIMLVKKEF 73

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           +V G        P+ AAL   G   CG  LI    VLTAAHC        ++V LG+H+ 
Sbjct: 1   LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCK----KPNLQVFLGKHNL 56

Query: 107 LSKNESVPVIIHF 119
             +  S       
Sbjct: 57  RQRESSQEQSSVV 69

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]} Length = 218

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (173), Expect = 5e-17
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   + H +P++ +L  +G  +CGATLIA   V++AAHC+  VN + ++V LG H+ 
Sbjct: 1   IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNL 60

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

 Score = 71.7 bits (174), Expect = 5e-17
 Identities = 18/48 (37%), Positives = 31/48 (64%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNP 94
          IVGG    + ++P+  +L   G   CGA+++   +VLTAAHC++G++ 
Sbjct: 1  IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSN 48

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (173), Expect = 6e-17
 Identities = 24/60 (40%), Positives = 36/60 (60%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           IVGG   +  +FP++A++  +G+ +CG  LI  R V+TAA C +  NP    V LG +D 
Sbjct: 1   IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDL 60

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           +V G  T+     W+ +L  + K  CG +LI +  VLTA  C    + K+ +  LG HD 
Sbjct: 1   VVNGIPTR-TNIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDV 59

Query: 107 LSKN 110
             + 
Sbjct: 60  HGRG 63

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           +VGG   + +  PW  A+  + +  CG  L+ +  VLTAAHC       + +V LG++  
Sbjct: 1   VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYVD----QYEVWLGKNKL 56

Query: 107 LSKNESVPVII 117
             +  S    +
Sbjct: 57  FQEEPSAQHRL 67

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 247

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (171), Expect = 2e-16
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 6/92 (6%)

Query: 35  NCACGQ-----VERNQRIVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHC 88
           +  CG+      +    +VGG V   H +PW  +L T+ G  +CG TLI+   VLTAAHC
Sbjct: 1   SFDCGKPQVEPKKCPGAVVGGCVAYPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHC 60

Query: 89  IEGVNPKEIKVTLGEHDRLSKNESVPVIIHFS 120
           +E          +    +    E     I  S
Sbjct: 61  LEKSPRPSSYKVILGAHQEVNLEPHVQEIEVS 92

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 19/43 (44%), Positives = 23/43 (53%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCI 89
          I+ G     H  PW AAL +  +  CG  L+  R VLTAAHC 
Sbjct: 1  ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCK 43

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (168), Expect = 5e-16
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 47  IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           ++ G +T+  + PW   L   K K  CGA LI    VLTAAHC++    K++ V LGE+
Sbjct: 1   LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMD--ESKKLLVRLGEY 57

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 242

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (166), Expect = 7e-16
 Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           I GG   K  +FPW   +   G       L+    VLTAAH +         + +   
Sbjct: 1   IYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMG 56

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (165), Expect = 1e-15
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 47  IVGGNVTKLHEFPWIAALTKKGKFY---CGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           IVGG      ++PW  +L   G ++   CG +LI  + VLTAAHC+         + +  
Sbjct: 1   IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQL 60

Query: 104 HD 105
            +
Sbjct: 61  RE 62

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

 Score = 67.9 bits (164), Expect = 2e-15
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 47  IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           ++GG      EFPW  +  ++       CGA+L++    L+A+HC++GV P  I+V  G 
Sbjct: 1   VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGL 60

Query: 104 H 104
            
Sbjct: 61  W 61

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 233

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (163), Expect = 2e-15
 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 47 IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEG 91
          IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+  
Sbjct: 1  IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQ 46

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.3 bits (163), Expect = 2e-15
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG 91
          IVGG   + +  P+  +L   G  +CG +LI  + V++AAHC + 
Sbjct: 1  IVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCYKS 44

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (163), Expect = 3e-15
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 47  IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLG 102
           IVGG  +   E+PW   L       +  CG ++I  + +LTAAHC  GV +PK ++V  G
Sbjct: 1   IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60

Query: 103 EHDRLSKNESVPVIIHFSV 121
             ++    E         +
Sbjct: 61  ILNQSEIKEDTSFFGVQEI 79

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (163), Expect = 3e-15
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFY-CGATLIAKRHVLTAAHCIEG 91
          +VGG      E+PW  +L   G+ + CGA+LI+   +++AAHC   
Sbjct: 1  VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYID 46

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (161), Expect = 4e-15
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPK 95
          I+GG   K+  FPW       G+   G  L+  R +LTAAH +     +
Sbjct: 1  IIGGQKAKMGNFPWQVFTNIHGR--GGGALLGDRWILTAAHTLYPKEHE 47

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]} Length = 236

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

 Score = 66.8 bits (161), Expect = 4e-15
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 6/79 (7%)

Query: 47  IVGGNVTKLHEFPWIAALTKKG----KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           +VGG V + + +PW  +L  K        CG +LI +  V+TAAHC++  + +  +V LG
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVD--SARTWRVVLG 58

Query: 103 EHDRLSKNESVPVIIHFSV 121
           EH+  +      ++   SV
Sbjct: 59  EHNLNTNEGKEQIMTVNSV 77

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 66.6 bits (161), Expect = 5e-15
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG 91
          IVGG   + +  PW  A+    ++ CG  LI    V+TAAHC   
Sbjct: 1  IVGGYKCEKNSQPWQVAVI--NEYLCGGVLIDPSWVITAAHCYSN 43

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

 Score = 66.1 bits (160), Expect = 5e-15
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG 91
          IVGG   K +  P   +L   G  +CG +L+ +  V++AAHC + 
Sbjct: 1  IVGGYECKAYSQPHQVSL-NSGYHFCGGSLVNENWVVSAAHCYKS 44

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 287

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (162), Expect = 6e-15
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 38  CGQVERNQRIVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
           CG V  +++      T  H+ PW A +      KG   C   ++++  VLTAAHC    +
Sbjct: 1   CGMVWEHRK-----GTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDD 55

Query: 94  -PKEIKVTLGEHDRLSKNESVPVIIHFSVSN 123
               IKV++G   R  + E V    +++++ 
Sbjct: 56  KEHSIKVSVGGEKRDLEIEVVLFHPNYNING 86

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

 Score = 65.9 bits (159), Expect = 7e-15
 Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)

Query: 47 IVGGNVTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCI 89
          IVGG   K  E PW A L  ++ + +CG T++++ ++LTAAHC+
Sbjct: 1  IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCL 44

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

 Score = 65.9 bits (159), Expect = 8e-15
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNP 94
          +VGG      EFP++  L       CG  L A+  VLTAAHC+ G   
Sbjct: 1  VVGGTRAAQGEFPFMVRL----SMGCGGALYAQDIVLTAAHCVSGSGN 44

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 65.9 bits (159), Expect = 8e-15
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG 91
          IVGG     +  P+  +L   G  +CG +LI  + V++AAHC + 
Sbjct: 1  IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKS 44

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (158), Expect = 1e-14
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 7/66 (10%)

Query: 38 CGQ----VERNQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN 93
          CG      E  QRI+GG+   +  FPW          + G  LI +  VLTAAH +EG  
Sbjct: 1  CGVPREPFEEKQRIIGGSDADIKNFPWQVFF---DNPWAGGALINEYWVLTAAHVVEGNR 57

Query: 94 PKEIKV 99
             + V
Sbjct: 58 EPTMYV 63

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 63.3 bits (152), Expect = 9e-14
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 4/47 (8%)

Query: 47 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCI 89
          +VGG   + + +PW  +L    + + +  CG TL+ +  VLTAAHCI
Sbjct: 1  VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCI 47

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (151), Expect = 9e-14
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 47 IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHC 88
          I+GG+  K H  P++A L    +K    CG  LI    VLTAAHC
Sbjct: 1  IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQDDFVLTAAHC 45

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 62.9 bits (151), Expect = 1e-13
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 47 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEI 97
          +VGG   + + +P   +L           CG TLI +  V+TAAHC++      +
Sbjct: 1  VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFRV 55

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.4 bits (150), Expect = 1e-13
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 57  EFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESVPVI 116
             PW  A+ +  K+ CG  L+ +  VLTAAHC       + +V LG+++ L    S    
Sbjct: 2   SQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYND----KYQVWLGKNNFLEDEPSDQHR 57

Query: 117 IHFSV 121
           +    
Sbjct: 58  LVSKA 62

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

 Score = 62.8 bits (151), Expect = 1e-13
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 47 IVGGNVTKLHEFPWIAALTKK----GKFYCGATLIAKRHVLTAAHCI 89
          IVGG    L EFP+  +  +        +CGA++  + + +TA HC+
Sbjct: 1  IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCV 47

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (150), Expect = 1e-13
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 47  IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGE 103
           IVGG+  + H  P++A+L      G  +CG TLI    VLTAAHC+  +  + + V LG 
Sbjct: 1   IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGA 60

Query: 104 HDR 106
           H+ 
Sbjct: 61  HNV 63

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (149), Expect = 2e-13
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 8/62 (12%)

Query: 49  GGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEH 104
           GG   K H  P++A L    +     +CG  LI +  VLTAAHC      + I VTLG H
Sbjct: 1   GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHC----AGRSITVTLGAH 56

Query: 105 DR 106
           + 
Sbjct: 57  NI 58

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 60.9 bits (146), Expect = 5e-13
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 8/68 (11%)

Query: 47  IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           I+GG  +  H  P++A L     K  +  CG  LI+++ VLTAAHC      +EI V LG
Sbjct: 1   IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHC----KGREITVILG 56

Query: 103 EHDRLSKN 110
            HD   + 
Sbjct: 57  AHDVRKRE 64

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (145), Expect = 8e-13
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 47 IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHC 88
          I+GG  ++ H  P++A L   +  G+  CG  L+ +  VLTAAHC
Sbjct: 1  IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHC 45

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]} Length = 230

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

 Score = 59.8 bits (143), Expect = 1e-12
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 47 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHC 88
          I+ G       FP+ A L      + + +CG +LI  + +LTAAHC
Sbjct: 1  IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHC 46

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.4 bits (142), Expect = 2e-12
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 47 IVGGNVTKLHEFPWIAAL---TKKGKFYCGATLIAKRHVLTAAHC 88
          I+GG+  K H  P++A L   T      CG  L+ +  VLTAAHC
Sbjct: 1  IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHC 45

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.0 bits (141), Expect = 3e-12
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 47 IVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHC 88
          I+GG+  K H  P++A L       G   CG  LI +  VLTAAHC
Sbjct: 1  IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC 46

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 251

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.5 bits (137), Expect = 1e-11
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 8/59 (13%)

Query: 38 CG----QVERNQRIVGGNVTKLHEFPWIAAL----TKKGKFYCGATLIAKRHVLTAAHC 88
          CG    Q   + R+VGG     H +PW  +L        +  CG TLI   HVLTAAHC
Sbjct: 1  CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHC 59

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.3 bits (134), Expect = 3e-11
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 6/66 (9%)

Query: 58  FPWIAAL----TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESV 113
           + W  +L           CG +LIA   V+TA HCI     +  +V LGE+DR     S 
Sbjct: 2   WSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIS--TSRTYQVVLGEYDRSVLEGSE 59

Query: 114 PVIIHF 119
            VI   
Sbjct: 60  QVIPIN 65

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]} Length = 215

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

 Score = 51.3 bits (121), Expect = 2e-09
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 6/80 (7%)

Query: 47  IVGGN-----VTKLHEFPWIAAL-TKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVT 100
           +V G+     V      P+ +      G   C  TLIA   +LT  HC+     +     
Sbjct: 1   VVIGDDGRTKVANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAK 60

Query: 101 LGEHDRLSKNESVPVIIHFS 120
              +  ++ + +V    + +
Sbjct: 61  GSVYPGMNDSTAVNGSANMT 80

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]} Length = 216

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

 Score = 42.7 bits (99), Expect = 2e-06
 Identities = 9/73 (12%), Positives = 18/73 (24%), Gaps = 5/73 (6%)

Query: 52  VTKLHEFPW-----IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDR 106
           +T      +     I      G F     ++ K  +LT  H ++  +     +       
Sbjct: 11  ITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAI 70

Query: 107 LSKNESVPVIIHF 119
              N         
Sbjct: 71  NQDNYPNGGFTAE 83

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]} Length = 263

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

 Score = 42.3 bits (98), Expect = 3e-06
 Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 6/65 (9%)

Query: 57  EFPWIAALTKKGKFYCGATLI------AKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN 110
               + A +K G   C  +L+       K + LTA HC  G       + +  + + S  
Sbjct: 21  IIRAVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTC 80

Query: 111 ESVPV 115
            +   
Sbjct: 81  RAPNT 85

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]} Length = 242

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

 Score = 39.6 bits (91), Expect = 3e-05
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 2/73 (2%)

Query: 45  QRIVGGNVTKLHEFPW--IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLG 102
           +     +     ++P+  I  +  KG+      LI K  VLT  H  +  N    KV+  
Sbjct: 28  ELFSKVDEKDRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIAKFANGDPSKVSFR 87

Query: 103 EHDRLSKNESVPV 115
                  N +   
Sbjct: 88  PSINTDDNGNTET 100

>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus [TaxId: 1280]} Length = 246

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Exfoliative toxin B
species: Staphylococcus aureus [TaxId: 1280]

 Score = 36.5 bits (83), Expect = 3e-04
 Identities = 10/76 (13%), Positives = 23/76 (30%), Gaps = 2/76 (2%)

Query: 40  QVERNQRIVGGNVTKLHEFPW--IAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEI 97
           +V    + +  ++T     P+  +  +  KG       LI K  ++T  H          
Sbjct: 16  EVPPTDKELYTHITDNARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVAREAAKNPS 75

Query: 98  KVTLGEHDRLSKNESV 113
            +           ++ 
Sbjct: 76  NIIFTPAQNRDAEKNE 91

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	124
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	99.86
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	99.85
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	99.84
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	99.82
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	99.81
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	99.81
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	99.81
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.8
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	99.8
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	99.8
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	99.8
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	99.8
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	99.79
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	99.79
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	99.79
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	99.79
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	99.78
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	99.78
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	99.78
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	99.78
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	99.78
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	99.78
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	99.77
d1elva1	259	Complement C1S protease, catalytic domain {Human (	99.77
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	99.77
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	99.77
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.76
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	99.76
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	99.76
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	99.76
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	99.75
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	99.75
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	99.75
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	99.74
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	99.73
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	99.73
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	99.73
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	99.72
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	99.71
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.71
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	99.71
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.7
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	99.7
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	99.69
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	99.68
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	99.64
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	99.53
d1arba_	263	Achromobacter protease {Achromobacter lyticus, str	99.2
d1p3ca_	215	Glutamyl endopeptidase {Bacillus intermedius [TaxI	99.02
d1agja_	242	Epidermolytic (exfoliative) toxin A {Staphylococcu	98.18
d2o8la1	216	V8 protease {Staphylococcus aureus [TaxId: 1280]}	98.08
d1qtfa_	246	Exfoliative toxin B {Staphylococcus aureus [TaxId:	97.75
d1hpga_	187	Glutamic acid-specific protease {Streptomyces gris	96.99
d2qaaa1	185	Protease B {Streptomyces griseus, strain k1 [TaxId	90.26
d2sgaa_	181	Protease A {Streptomyces griseus, strain k1 [TaxId	87.85
d1lcya2	205	Mitochondrial serine protease HtrA2, catalytic dom	86.9
d2h5ca1	198	alpha-Lytic protease {Lysobacter enzymogenes, 495	85.93
d2z9ia2	221	Protease PepD {Mycobacterium tuberculosis [TaxId:	84.47
d2qf3a1	210	Stress sensor protease DegS, catalytic domain {Esc	82.33

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.1e-21  Score=129.60  Aligned_cols=78  Identities=31%  Similarity=0.483  Sum_probs=64.5

Q ss_pred             ceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCCC------eecEEEC
Q psy12894         46 RIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKNE------SVPVIIH  118 (124)
Q Consensus        46 ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~~------~~~vi~H  118 (124)
                      ||+||+++.+++|||+|+|...+.++|+|+||+++||||||||+... ....+.|..+.........      ..+++.|
T Consensus         2 ri~gG~~a~~~e~Pw~v~i~~~~~~~C~GtLIs~~~VLTAAhCv~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~h   81 (240)
T d1mzaa_           2 EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPF   81 (240)
T ss_dssp             CCCCCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEEC
T ss_pred             EEECCEECCCCCCCcEEEEEECCeEEEEEEEEeCCEEEECeEcccccCCcceeEEEEeecccCcCCccceeEeeeeeeee
Confidence            89999999999999999999988899999999999999999999764 3356778887765544332      2348999


Q ss_pred             CCCCC
Q psy12894        119 FSVSN  123 (124)
Q Consensus       119 p~y~~  123 (124)
                      |+|+.
T Consensus        82 ~~~~~   86 (240)
T d1mzaa_          82 SRVTS   86 (240)
T ss_dssp             CCSSC
T ss_pred             ccccc
Confidence            99974

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.6e-20  Score=126.83  Aligned_cols=77  Identities=30%  Similarity=0.576  Sum_probs=64.5

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|+|...+.++|+|+||+++||||||||+.......+.+..+..+......      ..++++||+
T Consensus         1 I~gG~~~~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~i~~~~~   80 (228)
T d1bioa_           1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPD   80 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGGGGCSSSCEEEEESCSBSSSCCTTCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCcEEEEEECCcEEEEEEEEeCCEEEECceeeeccccceeeeeccccccccCCcceeeccceeeeeeec
Confidence            78999999999999999999888999999999999999999998766667778777765443332      334899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        81 y~~   83 (228)
T d1bioa_          81 SQP   83 (228)
T ss_dssp             CCT
T ss_pred             ccC
Confidence            974

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.7e-20  Score=127.09  Aligned_cols=73  Identities=34%  Similarity=0.559  Sum_probs=61.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|+|...+.++|+|+||+++||||||||+..    ...|++|.........      ..++++||+
T Consensus         1 i~~G~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~----~~~v~~g~~~~~~~~~~~~~~~~~~~~~~p~   76 (221)
T d1lo6a_           1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCKKP----NLQVFLGKHNLRQRESSQEQSSVVRAVIHPD   76 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCT----TCEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCCEEEEEECCcEEEEEEEEeCCEEEECeecccc----ccceeeceeeecccCccceeeeccccccCCC
Confidence            689999999999999999999889999999999999999999863    3578899876554433      224899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        77 y~~   79 (221)
T d1lo6a_          77 YDA   79 (221)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            973

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3e-20  Score=125.88  Aligned_cols=77  Identities=32%  Similarity=0.639  Sum_probs=61.9

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|+|...+.++|+|+||+++||||||||+.........+.++..+......      ...++.||+
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (225)
T d1a7sa_           1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENG   80 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSS
T ss_pred             CCCCEECCCCCCCcEEEEEECCcEEEEEEEEcCCEEEECeeeeeeccccceeeEEeeeecccccccccceeeeeeeeeee
Confidence            68999999999999999999888999999999999999999998766677888888776544333      223788999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        81 ~~~   83 (225)
T d1a7sa_          81 YDP   83 (225)
T ss_dssp             CBT
T ss_pred             ccc
Confidence            973

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=99.81  E-value=2.8e-20  Score=126.39  Aligned_cols=75  Identities=33%  Similarity=0.599  Sum_probs=63.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|+|...+.++|+|+||+++||||||||+..  .....+++|.........      ..++++||+
T Consensus         1 i~gG~~a~~~~~Pw~V~i~~~~~~~C~GtLIs~~~VLTaAhCv~~--~~~~~~~~g~~~~~~~~~~~~~~~v~~i~~~~~   78 (226)
T d1azza_           1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDG--AGFVDVVLGAHNIREDEATQVTIQSTDFTVHEN   78 (226)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTTEEEEEEEEETTEEEECHHHHTT--CSCEEEEESCSBSSSCCTTCEEEEECCEEECTT
T ss_pred             CCCCEECCCCCCCcEEEEEECCcEEEEEEEeeCCEEEEChhhccC--CcceEEEeccceeccCCcceEEEEeeeeeeccc
Confidence            689999999999999999998889999999999999999999974  355778888876554332      335999999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        79 y~~   81 (226)
T d1azza_          79 YNS   81 (226)
T ss_dssp             CBT
T ss_pred             ccc
Confidence            974

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=99.81  E-value=2.2e-20  Score=127.04  Aligned_cols=75  Identities=29%  Similarity=0.524  Sum_probs=62.5

Q ss_pred             eeCCEEcCCCCCceEEEEEe----CCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC---eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTK----KGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE---SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~----~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~---~~~vi~Hp  119 (124)
                      |+||+++.+++|||+|++..    ...++|+|+||+++||||||||+.  ......+++|..+......   ..++++||
T Consensus         1 i~~G~~a~~ge~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhC~~--~~~~~~v~~~~~~~~~~~~~~~v~~i~~hp   78 (230)
T d2hlca_           1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVH--DAVSVVVYLGSAVQYEGEAVVNSERIISHS   78 (230)
T ss_dssp             CBTCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHT--TEEEEEEEESCSBTTCCSEEEECSEEEECT
T ss_pred             CCCCEECCCCCCCCEEEEEEEecCCCeeEEEEEEEeCCEEEEeeeccc--ccccceeecccceecccccceeeEeEEeee
Confidence            68999999999999999975    346789999999999999999997  4466888999877655544   33499999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        79 ~y~~   82 (230)
T d2hlca_          79 MFNP   82 (230)
T ss_dssp             TCBT
T ss_pred             cccc
Confidence            9974

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.6e-20  Score=125.50  Aligned_cols=77  Identities=35%  Similarity=0.689  Sum_probs=65.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCCee-----cEEECCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNESV-----PVIIHFSV  121 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~~~-----~vi~Hp~y  121 (124)
                      |+||+++.+++|||+|+|...+.++|+|+||+++||||||||+.......+.+.++..+........     .++.||.|
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~C~G~LIs~~~VLTaAhC~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (218)
T d2z7fe1           1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGY   80 (218)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCC
T ss_pred             CCCCEECCCCCCCcEEEEEECCCeEEEEEEEeCCEEEECeEecccccccceeeeeeeccccccccceeeeeeeeEeeecc
Confidence            6899999999999999999988899999999999999999999876667788999887655443322     36889998


Q ss_pred             CC
Q psy12894        122 SN  123 (124)
Q Consensus       122 ~~  123 (124)
                      +.
T Consensus        81 ~~   82 (218)
T d2z7fe1          81 DP   82 (218)
T ss_dssp             BT
T ss_pred             cc
Confidence            74

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=8.6e-20  Score=124.47  Aligned_cols=72  Identities=28%  Similarity=0.489  Sum_probs=60.8

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||.++.+++|||+|+|...+.++|+|+||+++||||||||+..    ...|++|..+......      ..+++.||+
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~~~~~~C~GtLIs~~~VLTaAhCv~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (237)
T d1ao5a_           1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYVD----QYEVWLGKNKLFQEEPSAQHRLVSKSFPHPG   76 (237)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECTTCCCS----SCEEEESCCBSSSCCSSCEECCEEEEEECTT
T ss_pred             CCCCEECCCCCCCcEEEEEECCcEEEEEEEeeCCEEEECHHHcCC----CceEEEEeccccccccccEEEEEEEEeeccc
Confidence            689999999999999999998889999999999999999999963    3468888776554433      335899999


Q ss_pred             CC
Q psy12894        121 VS  122 (124)
Q Consensus       121 y~  122 (124)
                      |+
T Consensus        77 ~~   78 (237)
T d1ao5a_          77 FN   78 (237)
T ss_dssp             SC
T ss_pred             cc
Confidence            86

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=4.1e-20  Score=125.71  Aligned_cols=74  Identities=32%  Similarity=0.423  Sum_probs=57.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|+|.....++|+|+||+++||||||||+....   ..+.++..+......      ..+++.||+
T Consensus         1 ivgG~~a~~~e~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~hp~   77 (232)
T d1orfa_           1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKR---SQVILGAHSITREEPTKQIMLVKKEFPYPC   77 (232)
T ss_dssp             CBSCEECCTTSSTTEEEEECSSSCEEEEEEEETTEEEECTTCCCCTT---CEEEESCSBSSSCCTTCEEECEEEEEECTT
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEecCCEEEEChhhcCCCC---cceeeeeeeccccccccccceEEEEEeccc
Confidence            68999999999999999998888999999999999999999997533   233444433332221      234899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        78 y~~   80 (232)
T d1orfa_          78 YDP   80 (232)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            973

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=9.7e-20  Score=124.16  Aligned_cols=75  Identities=36%  Similarity=0.589  Sum_probs=61.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp  119 (124)
                      |+||+.+.+++|||+|++... ..+.|+|+||+++||||||||+..  ...+.|++|..+......      ..++++||
T Consensus         1 i~~G~~~~~~e~Pw~v~i~~~~~~~~C~GtLIs~~~VLTaAhCv~~--~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~~~   78 (240)
T d1autc_           1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDE--SKKLLVRLGEYDLRRWEKWELDLDIKEVFVHP   78 (240)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTSCEEEEEEEEETTEEEECGGGSSS--CSCCEEEESCCBTTCCCTTCEEEEEEEEEECT
T ss_pred             CCCCEECCCCCCCCEEEEEECCCCEEEEEEEEeCCEEEECceeccC--cccceeeccccccccccccceeeeeeccccce
Confidence            689999999999999999864 457999999999999999999974  355789999877654433      23489999


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      +|+.
T Consensus        79 ~~~~   82 (240)
T d1autc_          79 NYSK   82 (240)
T ss_dssp             TCBT
T ss_pred             eeec
Confidence            9973

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.4e-20  Score=126.95  Aligned_cols=75  Identities=29%  Similarity=0.490  Sum_probs=61.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCC--CCCceEEEEEceeecCCCCCe----ecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG--VNPKEIKVTLGEHDRLSKNES----VPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~--~~~~~~~V~~G~~~~~~~~~~----~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|++.  +.+.|+|+||+++||||||||+..  .....+.|.+|..+.......    .++++||+
T Consensus         1 i~gG~~~~~g~~Pw~v~i~--~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~i~~hp~   78 (242)
T d1q3xa1           1 IYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEG   78 (242)
T ss_dssp             CBSCEECCTTSSTTEEEEC--SSSSEEEEEETTTEEEECHHHHHHHHTTTCCCEEEESCSBTTCSCSEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCcCcEEEEc--CCCEEEEEEEcCCEEEEChhhccCCCCCcceEEEEeeeeeeccccccccceeeeEEeec
Confidence            7899999999999999995  457899999999999999999964  345677889998765544433    35999999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        79 y~~   81 (242)
T d1q3xa1          79 YTH   81 (242)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            973

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=99.80  E-value=8.1e-20  Score=123.65  Aligned_cols=76  Identities=34%  Similarity=0.626  Sum_probs=63.8

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC---eecEEECCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE---SVPVIIHFSVS  122 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~---~~~vi~Hp~y~  122 (124)
                      |+||.++.+++|||+|+|...+.++|+|+||+++||||||||+.........+.++.........   ..+++.||+|.
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~~~~~~C~GtLIs~~~VLTaAhC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~h~~~~   79 (224)
T d1gdna_           1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYS   79 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSSSSEEEEEEEEEECTTCB
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEEeCCEEEECcccceeccccccceeeccccccCCcceEEEEEEEeeeccc
Confidence            68999999999999999999989999999999999999999998766667778887765544333   23489999886

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.3e-19  Score=122.34  Aligned_cols=77  Identities=35%  Similarity=0.654  Sum_probs=64.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeC---CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC-----eecEEEC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK---GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE-----SVPVIIH  118 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~---~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~-----~~~vi~H  118 (124)
                      |+||..+.+++|||+|+|...   ..++|+|+||+++||||||||+.......+.|++|.........     ..+++.|
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~   80 (221)
T d1fuja_           1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFL   80 (221)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTBTTCCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCCEEEEEEEEeCCEEEEeeEEEeecCCccceeeeeccccccccccceeeeeeeEEE
Confidence            689999999999999999863   34789999999999999999998777778899999876554333     2348999


Q ss_pred             CCCCC
Q psy12894        119 FSVSN  123 (124)
Q Consensus       119 p~y~~  123 (124)
                      |.|+.
T Consensus        81 ~~~~~   85 (221)
T d1fuja_          81 NNYDA   85 (221)
T ss_dssp             CCCBT
T ss_pred             eeecC
Confidence            99873

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=99.79  E-value=8.8e-20  Score=124.16  Aligned_cols=77  Identities=27%  Similarity=0.590  Sum_probs=64.2

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC---ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC-----eecEEEC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE-----SVPVIIH  118 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~---~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~-----~~~vi~H  118 (124)
                      |+||.++.+++|||+|++....   .+.|+|+||+++||||||||+.......+.|.+|..+......     ..++++|
T Consensus         1 i~gG~~~~~~e~Pw~v~l~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~h   80 (241)
T d1m9ua_           1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMH   80 (241)
T ss_dssp             CBTCEECCTTSSTTEEEEEEESSSEEEEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEEC
T ss_pred             CCCCEECCCCCCCCEEEEEEeCCCccEEEEEEEEeCCEEEEChhhcccccCceeeEEEEeeecccccccccccceeeeee
Confidence            7899999999999999997643   3689999999999999999998777788899999877655443     2348999


Q ss_pred             CCCCC
Q psy12894        119 FSVSN  123 (124)
Q Consensus       119 p~y~~  123 (124)
                      |+|+.
T Consensus        81 ~~~~~   85 (241)
T d1m9ua_          81 ENYGA   85 (241)
T ss_dssp             TTTTC
T ss_pred             eeecc
Confidence            98873

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.79  E-value=1.1e-19  Score=123.66  Aligned_cols=77  Identities=30%  Similarity=0.576  Sum_probs=62.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC--CCceEEEEEceeecCCCCC-------eecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV--NPKEIKVTLGEHDRLSKNE-------SVPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~--~~~~~~V~~G~~~~~~~~~-------~~~vi~  117 (124)
                      |+||+++..++|||+|++...+.++|+|+||+++||||||||+...  ....+.+.+|..+......       ..++++
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~   80 (235)
T d1ekbb_           1 IVGGSDSREGAWPWVVALYFDDQQVCGASLVSRDWLVSAAHCVYGRNMEPSKWKAVLGLHMASNLTSPQIETRLIDQIVI   80 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTCCSSGGGEEEEESCCBTTCCCCTTCEEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEEcCCEEEEChhhccCCCCCccceeeeecccccccccCcceeEeeeeeeee
Confidence            6899999999999999999998899999999999999999999753  3456778888765433221       234899


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        81 hp~~~~   86 (235)
T d1ekbb_          81 NPHYNK   86 (235)
T ss_dssp             CTTCBT
T ss_pred             cccccc
Confidence            999974

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.4e-19  Score=120.79  Aligned_cols=71  Identities=35%  Similarity=0.583  Sum_probs=59.3

Q ss_pred             CCEEcCCCCCceEEEEEeC----CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCCe------ecEEEC
Q psy12894         49 GGNVTKLHEFPWIAALTKK----GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNES------VPVIIH  118 (124)
Q Consensus        49 gg~~~~~~~~Pw~v~l~~~----~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~~------~~vi~H  118 (124)
                      ||+++.+++|||+|++...    ..++|+|+||+++||||||||+.    ..+.|++|.++.......      .+++.|
T Consensus         1 GG~~a~~~e~Pw~v~i~~~~~~~~~~~C~G~LIs~~~VLTaAhCv~----~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~   76 (224)
T d1nn6a_           1 GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG----RSITVTLGAHNITEEEDTWQKLEVIKQFRH   76 (224)
T ss_dssp             CCEECCTTSSTTEEEEEEECTTSCEEEEEEEEEETTEEEECGGGCC----SEEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred             CCcCCcCCCCCCEEEEEEEeCCCCceEEEEEEEeCCEEEehhhccc----ccceEEecccccccccccccceeEEEEEEe
Confidence            7999999999999999752    34789999999999999999985    457899999887655542      248999


Q ss_pred             CCCCC
Q psy12894        119 FSVSN  123 (124)
Q Consensus       119 p~y~~  123 (124)
                      |+|+.
T Consensus        77 p~~~~   81 (224)
T d1nn6a_          77 PKYNT   81 (224)
T ss_dssp             TTCCT
T ss_pred             ecccc
Confidence            99974

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.1e-19  Score=122.29  Aligned_cols=77  Identities=36%  Similarity=0.594  Sum_probs=63.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCC-CceEEEEEceeecCCCCCe------ecEEECC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN-PKEIKVTLGEHDRLSKNES------VPVIIHF  119 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~-~~~~~V~~G~~~~~~~~~~------~~vi~Hp  119 (124)
                      |+||+.+.+++|||+|+|...+.++|+|+||+++||||||||+.... ...+.+.++..+.......      ..++.||
T Consensus         1 iigG~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTAAhCv~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (254)
T d2bz6h1           1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPS   80 (254)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEET
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEeCCCEEEECcccccCCCCcccceeeccceeeccccccceeeeeeeeeecc
Confidence            68999999999999999999888999999999999999999997643 4567888887766544332      2378899


Q ss_pred             CCCC
Q psy12894        120 SVSN  123 (124)
Q Consensus       120 ~y~~  123 (124)
                      .|+.
T Consensus        81 ~~~~   84 (254)
T d2bz6h1          81 TYVP   84 (254)
T ss_dssp             TCCT
T ss_pred             cccc
Confidence            8863

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=3.6e-19  Score=120.76  Aligned_cols=73  Identities=40%  Similarity=0.620  Sum_probs=59.5

Q ss_pred             eeCCEEcCCCCCceEEEEEeC----CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK----GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~----~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||.++.+++|||+|+|...    +.++|+|+||+++||||||||+.    ...+|++|.++......      ..+++
T Consensus         1 I~gG~~a~~ge~P~~v~i~~~~~~~~~~~C~GtLI~~~~VLTaAhC~~----~~~~v~~G~~~~~~~~~~~~~~~v~~i~   76 (227)
T d1fi8a_           1 IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHCSG----SKIQVTLGAHNIKEQEKMQQIIPVVKII   76 (227)
T ss_dssp             CBSCEECCTTSSTTEEEEEEECTTC-CCEEEEEEEETTEEEECGGGCC----SEEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEeCCCCceEEEEEEEeCCEEEEeccccc----ccceeeeeecccccCCCCceEEEEEEEE
Confidence            689999999999999999652    24789999999999999999986    45679999887654443      23499


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      .||+|+.
T Consensus        77 ~~~~~~~   83 (227)
T d1fi8a_          77 PHPAYNS   83 (227)
T ss_dssp             ECTTCBT
T ss_pred             ecccccC
Confidence            9999974

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=99.78  E-value=2.3e-19  Score=121.00  Aligned_cols=77  Identities=27%  Similarity=0.598  Sum_probs=60.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCC-ceEEEEEceeecCCCCC---eecEEECCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNP-KEIKVTLGEHDRLSKNE---SVPVIIHFSVS  122 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~-~~~~V~~G~~~~~~~~~---~~~vi~Hp~y~  122 (124)
                      |+||..+.+++|||+|+|...+.+.|+|+||+++||||||||+..... ..+.+..+.........   ..++++||+|+
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~h~~y~   80 (222)
T d1eq9a_           1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYD   80 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCB
T ss_pred             CCCCEECCCCCCCcEEEEEECCCEEEEEEEEeCCEEEECceeccccccccceeeecceeccccCcceeeeeeEEEeeccc
Confidence            689999999999999999998899999999999999999999986433 34555555444333333   33589999997


Q ss_pred             C
Q psy12894        123 N  123 (124)
Q Consensus       123 ~  123 (124)
                      .
T Consensus        81 ~   81 (222)
T d1eq9a_          81 D   81 (222)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5.2e-19  Score=121.11  Aligned_cols=77  Identities=30%  Similarity=0.542  Sum_probs=60.8

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCC------CCceEEEEEceeecCCCC-------Ce
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGV------NPKEIKVTLGEHDRLSKN-------ES  112 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~------~~~~~~V~~G~~~~~~~~-------~~  112 (124)
                      |+||.++.+++|||+|.|... +.++|+|+||+++||||||||+...      ....+.+..+..+.....       ..
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~C~GtlIs~~~VLTaA~Cv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   80 (241)
T d1eaxa_           1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRL   80 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCCBTTCTTSTTCEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCCEEEEEEEEcCCEEEECeeeeecCCceeeeccceeeEEeeeeecccccCCCcEEEEE
Confidence            689999999999999999875 4579999999999999999999652      234577777776544332       13


Q ss_pred             ecEEECCCCCC
Q psy12894        113 VPVIIHFSVSN  123 (124)
Q Consensus       113 ~~vi~Hp~y~~  123 (124)
                      .+|++||+|+.
T Consensus        81 ~~i~~Hp~y~~   91 (241)
T d1eaxa_          81 KRIISHPFFND   91 (241)
T ss_dssp             EEEEECTTCCT
T ss_pred             EEEEECCcccc
Confidence            45999999974

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.2e-19  Score=120.82  Aligned_cols=77  Identities=31%  Similarity=0.489  Sum_probs=56.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC-ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC----eecEEECCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG-KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE----SVPVIIHFSV  121 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~-~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~----~~~vi~Hp~y  121 (124)
                      |+||+++.+++|||+|++.... .++|+|+||+++||||||||+............+.........    ..++++||+|
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~C~GtlIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~h~~~   80 (233)
T d2p3ub1           1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF   80 (233)
T ss_dssp             CBSSEECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGGGSCSSCEEEESCSBTTSCCSCCEEEEEEEEEECTTC
T ss_pred             CCCCEECCCCCCCcEEEEEecCCCeEEEEEEEeCCEEEECceecccccccccccccccccccCCCceeecceeEEEeecc
Confidence            7899999999999999998754 5899999999999999999998644333333332222222221    2348999999


Q ss_pred             CC
Q psy12894        122 SN  123 (124)
Q Consensus       122 ~~  123 (124)
                      +.
T Consensus        81 ~~   82 (233)
T d2p3ub1          81 TK   82 (233)
T ss_dssp             CT
T ss_pred             cc
Confidence            74

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.5e-19  Score=123.76  Aligned_cols=75  Identities=27%  Similarity=0.407  Sum_probs=60.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCC-----CceEEEEEceeecC-----CCCCeecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVN-----PKEIKVTLGEHDRL-----SKNESVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~-----~~~~~V~~G~~~~~-----~~~~~~~vi  116 (124)
                      |+||..+.+++|||+|++...  +.|+|+||+++||||||||+....     ...+.|++|.++..     ......+|+
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~~--~~C~GtLIs~~~VLTaAhC~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~   78 (240)
T d2qy0b1           1 IIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVS   78 (240)
T ss_dssp             CBSCEECCTTSSTTEEEEESS--SEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEE
T ss_pred             CCCCEECCCCCcCCEEEECCC--ceEEEEEEcCCEEEEChHhCCCcccccccccceeeeeeeccccccCCcceEEEEEEE
Confidence            689999999999999998654  579999999999999999997532     34578999987533     233456799


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        79 vhp~y~~   85 (240)
T d2qy0b1          79 VHPDYRQ   85 (240)
T ss_dssp             ECTTCCT
T ss_pred             ecccccc
Confidence            9999963

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.1e-19  Score=121.11  Aligned_cols=77  Identities=25%  Similarity=0.520  Sum_probs=57.5

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC----CeecEEECCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN----ESVPVIIHFSVS  122 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~----~~~~vi~Hp~y~  122 (124)
                      |+||+++.+++|||+|+|.....+.|+|+||+++||||||||+.........+..+........    ...++.+||+|+
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~~~~~~C~GtLI~~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (235)
T d1rfna_           1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNYN   80 (235)
T ss_dssp             CBTCEECCTTSSTTEEEEESSSTTCEEEEEEETTEEEECGGGCCTTCCCEEEESCSBSSSCCSCCEEEEEEEEEECTTCB
T ss_pred             CCCCEECCCCCcCCEEEEecCCCEEEEEEEeeCCEEEEChhhcCCCCceEEEEeecccccCCCCcceeeeeEEeeccCCC
Confidence            7899999999999999998888889999999999999999999765433333333322211111    123499999997


Q ss_pred             C
Q psy12894        123 N  123 (124)
Q Consensus       123 ~  123 (124)
                      .
T Consensus        81 ~   81 (235)
T d1rfna_          81 A   81 (235)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=6.5e-20  Score=126.69  Aligned_cols=74  Identities=32%  Similarity=0.552  Sum_probs=56.0

Q ss_pred             CCceeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC-------CeecEE
Q psy12894         44 NQRIVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN-------ESVPVI  116 (124)
Q Consensus        44 ~~ri~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~-------~~~~vi  116 (124)
                      ..||+||+.+.+++|||+|++.   .++|+|+||+++||||||||+.+.  ....+++|..+.....       ...+++
T Consensus        11 ~~ri~gG~~~~~~~~Pw~v~l~---~~~C~GtLIs~~~VLTaAhCv~~~--~~~~v~~g~~~~~~~~~~~~~~~~v~~i~   85 (259)
T d1elva1          11 KQRIIGGSDADIKNFPWQVFFD---NPWAGGALINEYWVLTAAHVVEGN--REPTMYVGSTSVQTSRLAKSKMLTPEHVF   85 (259)
T ss_dssp             ---CBTCEECCGGGSTTEEEEE---TTEEEEEEEETTEEEECHHHHTTC--SSCCEECSCSBCC-------CEECEEEEE
T ss_pred             CCceECCEECCCCCcceEEEeC---CceEEEEEEeCCEEEecccccccc--cceeEEeeeeeeecccccccccccceeEe
Confidence            6799999999999999999984   368999999999999999999754  3456777766543221       234599


Q ss_pred             ECCCCC
Q psy12894        117 IHFSVS  122 (124)
Q Consensus       117 ~Hp~y~  122 (124)
                      +||+|+
T Consensus        86 ~hp~~~   91 (259)
T d1elva1          86 IHPGWK   91 (259)
T ss_dssp             ECTTSC
T ss_pred             ecceee
Confidence            999995

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.77  E-value=5.5e-19  Score=119.83  Aligned_cols=73  Identities=40%  Similarity=0.599  Sum_probs=60.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeC----CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK----GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~----~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||.++.+++|||+|+|...    ..++|+|+||+++||||||||+.    ..+.|++|.........      ..+++
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaA~C~~----~~~~v~~g~~~~~~~~~~~~~~~v~~~~   76 (224)
T d3rp2a_           1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKG----REITVILGAHDVRKRESTQQKIKVEKQI   76 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCC----SEEEEEESCSBTTSCCTTCEEEEEEEEE
T ss_pred             CCCCEECcCCCCCCEEEEEEEeCCCCeEEEEEEEEcCCeeEecccccc----cccEEEeccccccCccccceeeeEEEEE
Confidence            689999999999999999752    24789999999999999999985    56889999876554433      23489


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        77 ~~~~~~~   83 (224)
T d3rp2a_          77 IHESYNS   83 (224)
T ss_dssp             ECTTCCS
T ss_pred             ecccccc
Confidence            9999974

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.77  E-value=7.1e-19  Score=119.05  Aligned_cols=73  Identities=37%  Similarity=0.603  Sum_probs=58.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeC---CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK---GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~---~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~  117 (124)
                      |+||.++.+++|||+|++...   ..++|+|+||+++||||||||+.    ....+++|.........      ..++++
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~~~~~~~~C~GtLIs~~~VLTaAhC~~----~~~~~~~~~~~~~~~~~~~~~~~V~~i~~   76 (224)
T d1eufa_           1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLG----SSINVTLGAHNIMERERTQQVIPVRRPIP   76 (224)
T ss_dssp             CBSCEECCTTSCTTEEEEEEESSSSEEEEEEEEEETTEEEECGGGCC----EEEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEcCCCcEEEEEEEEcCCEEEeeceecc----cccceeeeeeeecccCCCcEEEEEEEEEE
Confidence            789999999999999999753   34789999999999999999986    34567777765544333      345999


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||+|+.
T Consensus        77 hp~~~~   82 (224)
T d1eufa_          77 HPDYND   82 (224)
T ss_dssp             CTTCCT
T ss_pred             CCcccc
Confidence            999974

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.76  E-value=6.4e-19  Score=121.09  Aligned_cols=81  Identities=28%  Similarity=0.475  Sum_probs=57.8

Q ss_pred             CCCceeCCEEcCCCCCceEEEEEeC----CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC-----ee
Q psy12894         43 RNQRIVGGNVTKLHEFPWIAALTKK----GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE-----SV  113 (124)
Q Consensus        43 ~~~ri~gg~~~~~~~~Pw~v~l~~~----~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~-----~~  113 (124)
                      ...||+||+++.+++|||+|++...    ..+.|+|+||+++||||||||+.........+..+.........     ..
T Consensus        10 ~~~ri~gG~~a~~~~~Pw~v~i~~~~~~~~~~~C~G~LIs~~~VLTaAhC~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   89 (251)
T d1pytd_          10 LSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVD   89 (251)
T ss_dssp             SSSSCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEE
T ss_pred             CCCeEECCEECCCCCCCcEEEEEEEeCCCceeEEeEEEEcCCeEEEeeecccccccceeeeeeeeeecccCCCceEEeEE
Confidence            3678999999999999999999752    23689999999999999999998644333333222222111111     33


Q ss_pred             cEEECCCCCC
Q psy12894        114 PVIIHFSVSN  123 (124)
Q Consensus       114 ~vi~Hp~y~~  123 (124)
                      ++++||+|+.
T Consensus        90 ~i~~h~~y~~   99 (251)
T d1pytd_          90 TIFVHEKWNS   99 (251)
T ss_dssp             EEEECTTCBT
T ss_pred             EEEEeeeecc
Confidence            4999999974

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=9.9e-19  Score=119.34  Aligned_cols=63  Identities=32%  Similarity=0.585  Sum_probs=55.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN  110 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~  110 (124)
                      |+||.++.. .+||+|+|++.++|+|+|+||+++||||||||+...+...+.|++|..+.....
T Consensus         1 ~~~g~~~~~-~~~w~vsi~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~v~~g~~~~~~~~   63 (234)
T d1si5h_           1 VVNGIPTRT-NIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRG   63 (234)
T ss_dssp             CBSCEECSS-CCTTEEEEEESSSEEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCST
T ss_pred             CCCCEeCCC-CcCeEEEEEECCcEEEEEEEEeCCEEEECcCccCCCCCccceEEEEeecccccc
Confidence            689999976 599999999999999999999999999999999877778899999987655433

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.5e-19  Score=120.46  Aligned_cols=85  Identities=36%  Similarity=0.657  Sum_probs=60.8

Q ss_pred             CCCCccC-----CCceeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCCCC-ceEEEEEceeecCCC
Q psy12894         37 ACGQVER-----NQRIVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGVNP-KEIKVTLGEHDRLSK  109 (124)
Q Consensus        37 ~cg~~~~-----~~ri~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~~~-~~~~V~~G~~~~~~~  109 (124)
                      .||+.+.     ..||+||..+.+++|||+|+|... +.++|+|+||+++||||||||+..... .......+.......
T Consensus         3 ~cg~~~~~~~~~~~ri~gG~~a~~~~~Pw~v~i~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~   82 (247)
T d1rjxb_           3 DCGKPQVEPKKCPGAVVGGCVAYPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNL   82 (247)
T ss_dssp             STTCCSSCCCCCCTTSTTCEECCTTSSTTEEEEEETTCCEEEEEEEEETTEEEEEGGGGTTCSCGGGEEEEESCCBSSSC
T ss_pred             CCCCCCcCCCCCCCeEECCEECCCCCCCcEEEEEECCCCEEEEEEEEeCCEEEeeeEEEEeccCCccceeeccccccccc
Confidence            5777432     458999999999999999999775 457999999999999999999976433 334444444443344


Q ss_pred             CCeecEEECCCC
Q psy12894        110 NESVPVIIHFSV  121 (124)
Q Consensus       110 ~~~~~vi~Hp~y  121 (124)
                      ....+.+.|+.|
T Consensus        83 ~~~~~~~~~~~~   94 (247)
T d1rjxb_          83 EPHVQEIEVSRL   94 (247)
T ss_dssp             CTTCEEEEEEEE
T ss_pred             cceeeEEeeccc
Confidence            444445555544

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=8.3e-19  Score=120.02  Aligned_cols=77  Identities=31%  Similarity=0.585  Sum_probs=59.5

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC---ceeEEEEEecCCEEEecccccCCCC--CceEEEEEceeecCCCCC---eecEEEC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGVN--PKEIKVTLGEHDRLSKNE---SVPVIIH  118 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~---~~~CgGsLi~~~~vlTaahC~~~~~--~~~~~V~~G~~~~~~~~~---~~~vi~H  118 (124)
                      |+||+++.+++|||+|++....   .+.|+|+||+++||||||||+....  ...+.+.+|.........   ..++++|
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~h   80 (243)
T d2fpza1           1 IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYYQDQLLPVSRIIVH   80 (243)
T ss_dssp             CBSCEECCTTSCTTEEEEEECSSSCEEEEEEEEEETTEEEECHHHHCSBCCCGGGEEEECCCSBTTTTCCCEEEEEEEEC
T ss_pred             CCCCEECCCCCCCcEEEEEECCCcccEEEEEEEEeCCEEEECceeccCCCCcceeEEEEeeecccccccEEEeeeeeecc
Confidence            6899999999999999997743   3689999999999999999997643  344556666555443332   3459999


Q ss_pred             CCCCC
Q psy12894        119 FSVSN  123 (124)
Q Consensus       119 p~y~~  123 (124)
                      |+|+.
T Consensus        81 p~~~~   85 (243)
T d2fpza1          81 PQFYT   85 (243)
T ss_dssp             TTCSC
T ss_pred             ccccc
Confidence            99964

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.5e-19  Score=120.82  Aligned_cols=73  Identities=38%  Similarity=0.529  Sum_probs=59.3

Q ss_pred             eeCCEEcCCCCCceEEEEEe---CCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTK---KGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~---~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~  117 (124)
                      |+||+++.+++|||+|++..   ...++|+|+||+++||||||||+.    ....|.+|.........      ..+++.
T Consensus         1 iigG~~a~~~~~Pw~v~l~~~~~~~~~~C~GtLIs~~~VLTaAhC~~----~~~~v~~g~~~~~~~~~~~~~~~v~~i~~   76 (227)
T d1fq3a_           1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQDDFVLTAAHCWG----SSINVTLGAHNIKEQEPTQQFIPVKRPIP   76 (227)
T ss_dssp             CBTCBCCCTTSCTTEEECCEEETTEEECCEEEEEETTEEEECGGGCC----SEEEEEESCSBTTTTCTTCEEEEEEEECC
T ss_pred             CCCCEECCCCCCCCEEEEEEEcCCCcEEEEEEEEeCCEEEeCEeecc----ccccceeccccccccccccEEEEEEEEEe
Confidence            68999999999999999864   235789999999999999999986    45778899876554433      234899


Q ss_pred             CCCCCC
Q psy12894        118 HFSVSN  123 (124)
Q Consensus       118 Hp~y~~  123 (124)
                      ||.|+.
T Consensus        77 ~~~~~~   82 (227)
T d1fq3a_          77 HPAYNP   82 (227)
T ss_dssp             CTTCCT
T ss_pred             cccCCC
Confidence            999974

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=99.76  E-value=6.1e-19  Score=119.71  Aligned_cols=72  Identities=35%  Similarity=0.525  Sum_probs=56.9

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCCCe--ecEEECCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKNES--VPVIIHFSVS  122 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~~~--~~vi~Hp~y~  122 (124)
                      |+||..+.+++|||+|++.    +.|+|+||+++||||||||+... ....+.|.+|..+.......  ..+.+||+|+
T Consensus         1 ~~gG~~~~~~~~Pw~v~l~----~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~v~~g~~~~~~~~~~~i~~~~i~~~~~   75 (223)
T d1os8a_           1 VVGGTRAAQGEFPFMVRLS----MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPG   75 (223)
T ss_dssp             CBSCEECCTTSSTTEEEET----TTEEEEEEETTEEEECGGGSSCSEECCCCEEEESCSBTTCTTCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCcEEEEe----ccEeEEEEeCCEEEEChhhccCCCCcceeeeccccccccccccccceeeeeeeccc
Confidence            6899999999999999993    57999999999999999999753 34567899998876554432  2356666664

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=99.75  E-value=2.3e-18  Score=117.42  Aligned_cols=77  Identities=29%  Similarity=0.581  Sum_probs=58.8

Q ss_pred             eeCCEEcCCCCCceEEEEEeC----CceeEEEEEecCCEEEecccccCCCC---CceEEEEEceeecCCCCC------ee
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK----GKFYCGATLIAKRHVLTAAHCIEGVN---PKEIKVTLGEHDRLSKNE------SV  113 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~----~~~~CgGsLi~~~~vlTaahC~~~~~---~~~~~V~~G~~~~~~~~~------~~  113 (124)
                      |+||+++.+++|||+|++...    ..++|+|+||+++||||||||+....   ...+.+..+.........      ..
T Consensus         1 i~gG~~~~~~~~Pw~v~l~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   80 (237)
T d2f91a1           1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVS   80 (237)
T ss_dssp             CBSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEecCCCCcEEEEEEEEeCCEEEECcccccccCCccccceeEEeeecccccccCcceeeeEE
Confidence            689999999999999999653    23689999999999999999997532   345666666554433332      33


Q ss_pred             cEEECCCCCC
Q psy12894        114 PVIIHFSVSN  123 (124)
Q Consensus       114 ~vi~Hp~y~~  123 (124)
                      ++++||+|+.
T Consensus        81 ~i~~h~~y~~   90 (237)
T d2f91a1          81 KIILHENFDY   90 (237)
T ss_dssp             EEEECTTCCT
T ss_pred             EEEEccccCC
Confidence            5999999984

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=6.6e-19  Score=119.36  Aligned_cols=76  Identities=24%  Similarity=0.376  Sum_probs=52.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCC--CCCeecEEECCCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLS--KNESVPVIIHFSVSN  123 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~--~~~~~~vi~Hp~y~~  123 (124)
                      |+||.++.+++|||+|+|. .+.++|+|+||+++||||||||+...................  .....++++||+|+.
T Consensus         1 i~gG~~~~~~~~Pw~v~l~-~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hp~y~~   78 (223)
T d1j16a_           1 IVGGYTCQENSVPYQVSLN-SGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDR   78 (223)
T ss_dssp             CBSCEECCTTSSTTEEEEE-SSSEEEEEEEEETTEEEECGGGCCSSCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBT
T ss_pred             CCCCEECCCCCCCcEEEEe-CCCEEEEEEEEcCCEEEeCHHHCCCcCCceeeeeeeccccccceeeeeeeEEecCCCCc
Confidence            6899999999999999985 556899999999999999999997532211111111111000  001234899999974

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.1e-18  Score=115.72  Aligned_cols=72  Identities=36%  Similarity=0.607  Sum_probs=59.5

Q ss_pred             eeCCEEcCCCCCceEEEEEeC---CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK---GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVII  117 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~---~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~  117 (124)
                      |+||.++.+++|||+|.+...   ..++|+|+||+++||||||||+.    ....|.+|.........      ..+++.
T Consensus         1 IvgG~~a~~~e~Pw~v~i~~~~~~~~~~C~GtlI~~~~VLTaAhC~~----~~~~v~~g~~~~~~~~~~~~~~~v~~i~~   76 (224)
T d1t32a1           1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWG----SNINVTLGAHNIQRRENTQQHITARRAIR   76 (224)
T ss_dssp             CBSCEECCTTSSTTEEEEEESSSTTSCEEEEEEEETTEEEECGGGCC----SCEEEEESCSBTTSCCTTCEEEEEEEEEE
T ss_pred             CCCCEECCCCCCCCEEEEEEEcCCCCEEEEEEEEcCCEEEEeEEccc----ccccceeeeeeeeccccceeeecceeEEE
Confidence            789999999999999999763   35799999999999999999975    45788898876554432      345999


Q ss_pred             CCCCC
Q psy12894        118 HFSVS  122 (124)
Q Consensus       118 Hp~y~  122 (124)
                      ||+|+
T Consensus        77 ~~~~~   81 (224)
T d1t32a1          77 HPQYN   81 (224)
T ss_dssp             CTTCB
T ss_pred             eeccc
Confidence            99986

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.75  E-value=2e-18  Score=116.49  Aligned_cols=72  Identities=33%  Similarity=0.584  Sum_probs=56.1

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi~Hp~  120 (124)
                      |+||..+.+++|||+|+|. .+.++|+|+||+++||||||||+...    ..+++|..+......      ..++++||.
T Consensus         1 i~GG~~a~~~~~Pw~v~l~-~~~~~C~GtLIs~~~VLTaAhC~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (223)
T d1hj9a_           1 IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSG----IQVRLGEDNINVVEGNEQFISASKSIVHPS   75 (223)
T ss_dssp             CCSCEECCTTSSTTEEEEE-SSSEEEEEEEEETTEEEECGGGCCSS----CEEEESCSSTTSCCSCCEEEEEEEEEECTT
T ss_pred             CCCCEECCCCCCCeEEEEE-CCCEEEEEEEeeCCEEEeCeeECCCc----CcceecccccccccceeeeeceeeEEeccc
Confidence            6899999999999999995 45678999999999999999999642    345666655443322      223899999


Q ss_pred             CCC
Q psy12894        121 VSN  123 (124)
Q Consensus       121 y~~  123 (124)
                      |+.
T Consensus        76 ~~~   78 (223)
T d1hj9a_          76 YNS   78 (223)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            973

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.2e-18  Score=115.96  Aligned_cols=77  Identities=35%  Similarity=0.640  Sum_probs=59.8

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC---ceeEEEEEecCCEEEecccccCCCC-CceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG---KFYCGATLIAKRHVLTAAHCIEGVN-PKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~---~~~CgGsLi~~~~vlTaahC~~~~~-~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||+++.+++|||+|.+...+   .++|+|+||+++||||||||+.... ...+.+..+.........      ..+++
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~   80 (237)
T d1xx9a_           1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEII   80 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGTTCSCGGGEEEEESCSBGGGCCTTCCCEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEECCCCccEEEEEEEEeCCEEEeCeEeeecccCccceeeecccccccccccceEEEEeeEEE
Confidence            7899999999999999997533   4689999999999999999997643 355677776654433222      33489


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      .||+|+.
T Consensus        81 ~h~~~~~   87 (237)
T d1xx9a_          81 IHDQYKM   87 (237)
T ss_dssp             ECTTCSC
T ss_pred             Eeccccc
Confidence            9999974

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.3e-18  Score=122.48  Aligned_cols=69  Identities=33%  Similarity=0.517  Sum_probs=54.7

Q ss_pred             EcCCCCCceEEEEEe----CCceeEEEEEecCCEEEecccccCCC-CCceEEEEEceeecCCCCCeecEEECCCCC
Q psy12894         52 VTKLHEFPWIAALTK----KGKFYCGATLIAKRHVLTAAHCIEGV-NPKEIKVTLGEHDRLSKNESVPVIIHFSVS  122 (124)
Q Consensus        52 ~~~~~~~Pw~v~l~~----~~~~~CgGsLi~~~~vlTaahC~~~~-~~~~~~V~~G~~~~~~~~~~~~vi~Hp~y~  122 (124)
                      .+..++|||+|+|..    ...++|+|+||+++||||||||+... ....+.|++|....  .....++++||+|+
T Consensus        10 ~t~~~e~PW~v~i~~~~~~~~~~~C~GtLIs~~~VLTAAhCv~~~~~~~~~~v~~g~~~~--~~~v~~i~~Hp~y~   83 (287)
T d1rrka1          10 GTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKR--DLEIEVVLFHPNYN   83 (287)
T ss_dssp             CCHHHHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEETTCSS--CEEEEEEEECTTCC
T ss_pred             CCCcCCCCCEEEEEEEECCCCcEEEEEEEecCCEEEEChhheecCCCcceEEEEeCCeec--eeeeEEEEecCCcc
Confidence            466789999999976    23579999999999999999999653 34568899986532  23466799999996

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=99.73  E-value=5.8e-18  Score=114.76  Aligned_cols=76  Identities=32%  Similarity=0.500  Sum_probs=57.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeC-CceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCCe----ecEEECCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK-GKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNES----VPVIIHFSV  121 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~-~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~~----~~vi~Hp~y  121 (124)
                      |+||..+.+++|||+|+|... +.+.|+|+||+++||||||||+.........+..+..+.......    ..++.||.|
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (228)
T d1fxya_           1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF   80 (228)
T ss_dssp             CBSCEECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTC
T ss_pred             CCCCEECCCCCCCcEEEEEEcCCCeEEEEEEeeCCEEEECceeeecccccccccccccccccCCcceeeeeeccceeeee
Confidence            689999999999999999874 458999999999999999999987655555555554333222221    127888887


Q ss_pred             C
Q psy12894        122 S  122 (124)
Q Consensus       122 ~  122 (124)
                      .
T Consensus        81 ~   81 (228)
T d1fxya_          81 T   81 (228)
T ss_dssp             B
T ss_pred             e
Confidence            5

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=5.2e-18  Score=114.80  Aligned_cols=45  Identities=42%  Similarity=0.739  Sum_probs=42.9

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG   91 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~   91 (124)
                      |+||+++.+++|||+|+|...+.++|+|+||+++||||||||+..
T Consensus         1 i~~G~~~~~~~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhC~~~   45 (225)
T d1npma_           1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQ   45 (225)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCCEEEEEECCcEEEEEEEEcCCEEEEchHhCcc
Confidence            689999999999999999998889999999999999999999974

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=99.73  E-value=1.8e-18  Score=117.78  Aligned_cols=46  Identities=37%  Similarity=0.707  Sum_probs=43.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGV   92 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~   92 (124)
                      |+||..+.+++|||+|+|...+.++|+|+||+++||||||||+...
T Consensus         1 i~gG~~a~~~e~Pw~v~i~~~~~~~C~G~LIs~~~VLTaAhCv~~~   46 (234)
T d1op0a_           1 VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHCDSTD   46 (234)
T ss_dssp             CBSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCSS
T ss_pred             CCCCEECCCCCcCcEEEEEECCcEEEEEEEEcCCEEEECceeCCCC
Confidence            6899999999999999999988899999999999999999999753

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=99.72  E-value=9.3e-18  Score=113.41  Aligned_cols=73  Identities=32%  Similarity=0.472  Sum_probs=52.7

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC----eecEEECCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE----SVPVIIHFSVS  122 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~----~~~vi~Hp~y~  122 (124)
                      |+||+++.+++|||+|+|. .+.++|+|+||+++||||||||+...  ....+..+.........    ..+++.||.|+
T Consensus         1 i~gG~~~~~~~~Pw~v~l~-~~~~~C~GtLIs~~~VLTAAhCv~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (222)
T d1hj8a_           1 IVGGYECKAYSQPHQVSLN-SGYHFCGGSLVNENWVVSAAHCYKSR--VEVRLGEHNIKVTEGSEQFISSSRVIRHPNYS   77 (222)
T ss_dssp             CBSCEECCTTSCTTEEEEE-SSSEEEEEEEEETTEEEECGGGCCSS--CEEEESCSBTTSCCSCCEEEEEEEEEECTTCB
T ss_pred             CCCCEECCCCCCCeEEEEE-CCCEEEEEEEeeCCEEEeCceecccc--cCcceeeccccccCCccccccceEEEeccccc
Confidence            7899999999999999995 45689999999999999999999753  22333333222222222    22378888876

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5e-18  Score=116.90  Aligned_cols=75  Identities=35%  Similarity=0.557  Sum_probs=55.5

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCc--eEEEEEceeecCCCCC----eecEEECCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPK--EIKVTLGEHDRLSKNE----SVPVIIHFS  120 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~--~~~V~~G~~~~~~~~~----~~~vi~Hp~  120 (124)
                      |+||.++..++|||+|++...+.++|+|+||+++||||||||+.+....  ......+.........    ..+++.||.
T Consensus         1 i~gG~~~~~~e~Pw~v~I~~~~~~~C~GtLIs~~~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~h~~   80 (255)
T d1z8ga1           1 IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGG   80 (255)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETT
T ss_pred             CCCCEECCCCCcCcEEEEEECCcEEEEEEEEeCCEEEECceecCCCCCccceeeEeeeeecccCCccEEEEEEEEEEEee
Confidence            6899999999999999999998999999999999999999999764322  2333333222222211    335888887


Q ss_pred             C
Q psy12894        121 V  121 (124)
Q Consensus       121 y  121 (124)
                      |
T Consensus        81 ~   81 (255)
T d1z8ga1          81 Y   81 (255)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.71  E-value=1.4e-17  Score=113.07  Aligned_cols=75  Identities=31%  Similarity=0.634  Sum_probs=56.4

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC----ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG----KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~----~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||+.+.+++|||+|.|....    .+.|+|+||+++||||||||+....  ...+.++.........      ..+++
T Consensus         1 i~gG~~~~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~~--~~~v~~~~~~~~~~~~~~~~~~v~~~~   78 (241)
T d1brup_           1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSR--TYRVVLGRHSLSTNEPGSLAVKVSKLV   78 (241)
T ss_dssp             CBSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTTS--CEEEEESCSBSSSCCTTCEEEEEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEcCCCcceEEeEEEEEeCCEEEECeEeeeccc--ccceeeeccceeccCCCccccceeeeE
Confidence            6899999999999999997532    3689999999999999999997543  4455565444333222      23488


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||+|+.
T Consensus        79 ~~~~~~~   85 (241)
T d1brup_          79 VHQDWNS   85 (241)
T ss_dssp             ECTTCCT
T ss_pred             EEeeeee
Confidence            9999863

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.71  E-value=2e-17  Score=112.25  Aligned_cols=45  Identities=42%  Similarity=0.838  Sum_probs=43.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG   91 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~   91 (124)
                      |+||.++.+++|||+|.|...+.+.|+|+||+++||||||||+..
T Consensus         1 i~gG~~~~~~e~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~   45 (237)
T d1gvza_           1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMSD   45 (237)
T ss_dssp             CBSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCcEEEEEECCeEEEEEEEEeCCEEEeChhhccC
Confidence            689999999999999999999899999999999999999999975

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.70  E-value=2.4e-17  Score=111.83  Aligned_cols=63  Identities=33%  Similarity=0.613  Sum_probs=51.3

Q ss_pred             eeCCEEcCCCCCceEEEEEeC--C--ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKK--G--KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE  111 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~--~--~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~  111 (124)
                      |+||+++.+++|||+|++...  .  .++|+|+||+++||||||||+...  ....|.+|..+......
T Consensus         1 i~~G~~a~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~--~~~~v~~g~~~~~~~~~   67 (240)
T d1gvkb_           1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRE--LTFRVVVGEHNLNQNNG   67 (240)
T ss_dssp             CBTCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCSC--CCEEEEESCSBTTSCCS
T ss_pred             CCCCEECCCCCCCEEEEEEEecCCccceEEEEEEEeCCEEEECccccccc--CCceEEeeeeecccccc
Confidence            689999999999999999653  2  258999999999999999999753  44568888877655443

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=99.70  E-value=1.4e-17  Score=112.88  Aligned_cols=75  Identities=35%  Similarity=0.663  Sum_probs=57.0

Q ss_pred             eeCCEEcCCCCCceEEEEEeCC----ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC------eecEE
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKG----KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE------SVPVI  116 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~----~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~------~~~vi  116 (124)
                      |+||..+.+++|||+|++....    .+.|+|+||+++||||||||+...  ....+.+|.........      ...+.
T Consensus         1 iigG~~~~~~~~Pw~v~i~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~   78 (236)
T d1elta_           1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSA--RTWRVVLGEHNLNTNEGKEQIMTVNSVF   78 (236)
T ss_dssp             CBSSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSSC--CCEEEEESCSBTTSCCSCCEEECEEEEE
T ss_pred             CCCCEECCCCCCCcEEEEEEccCCcceeEEEEEEEeCCEEEECeeecccc--ccceeeccceeeecccCCceeeeeeEEE
Confidence            6899999999999999997532    357999999999999999999753  44667777654433332      12377


Q ss_pred             ECCCCCC
Q psy12894        117 IHFSVSN  123 (124)
Q Consensus       117 ~Hp~y~~  123 (124)
                      +||.|+.
T Consensus        79 ~~~~~~~   85 (236)
T d1elta_          79 IHSGWNS   85 (236)
T ss_dssp             ECTTCCT
T ss_pred             Eeeeecc
Confidence            8888763

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.68  E-value=7.5e-17  Score=109.37  Aligned_cols=43  Identities=40%  Similarity=0.784  Sum_probs=39.6

Q ss_pred             eeCCEEcCCCCCceEEEEEeCCceeEEEEEecCCEEEecccccCC
Q psy12894         47 IVGGNVTKLHEFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEG   91 (124)
Q Consensus        47 i~gg~~~~~~~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~   91 (124)
                      |+||+.|.+++|||+|++..  .++|+|+||+++||||||||+..
T Consensus         1 i~gG~~a~~~~~Pw~v~i~~--~~~C~GtLIs~~~VLTaAhCv~~   43 (235)
T d1tona_           1 IVGGYKCEKNSQPWQVAVIN--EYLCGGVLIDPSWVITAAHCYSN   43 (235)
T ss_dssp             CBSCEECCTTSCTTEEEEES--SSEEEEEEEETTEEEECGGGCCS
T ss_pred             CCCCEECCCCCCCeEEEEcC--CeEEEEEEecCCEEEECceecCC
Confidence            68999999999999999974  47999999999999999999864

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.64  E-value=6.1e-17  Score=109.87  Aligned_cols=64  Identities=31%  Similarity=0.531  Sum_probs=48.4

Q ss_pred             CCceEEEEEeCC----ceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecCCCCC--------eecEEECCCCC
Q psy12894         57 EFPWIAALTKKG----KFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKNE--------SVPVIIHFSVS  122 (124)
Q Consensus        57 ~~Pw~v~l~~~~----~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~~--------~~~vi~Hp~y~  122 (124)
                      +|||+|+|+.+.    .+.|+|+||+++||||||||+...  ....+.+|.........        ..+|++||+|+
T Consensus         1 ~~PW~v~l~~~~~~~~~~~C~GtLIs~~~VLTaAhCv~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~hp~~~   76 (232)
T d1fona_           1 SWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTS--RTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWN   76 (232)
T ss_dssp             CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCTT--SCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCC
T ss_pred             CCccEEEEEEeCCCceEEEEEEEEecCCEEEEChhhccCC--CceEEEEEeccccccccccccccceeEEEEEccCcc
Confidence            599999997532    368999999999999999999753  45677777665432221        33599999997

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=3.6e-15  Score=100.61  Aligned_cols=47  Identities=38%  Similarity=0.736  Sum_probs=37.3

Q ss_pred             CCceEEEEEeCCceeEEEEEecCCEEEecccccCCCCCceEEEEEceeecC
Q psy12894         57 EFPWIAALTKKGKFYCGATLIAKRHVLTAAHCIEGVNPKEIKVTLGEHDRL  107 (124)
Q Consensus        57 ~~Pw~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~~~~~~~~V~~G~~~~~  107 (124)
                      ++||+|++...+.+.|+|+||+++||||||||+.+    ...+++|.....
T Consensus         2 ~~Pw~v~i~~~~~~~C~GtLIs~~~VLTaAhCv~~----~~~~~~~~~~~~   48 (228)
T d1sgfa_           2 SQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYND----KYQVWLGKNNFL   48 (228)
T ss_dssp             CCTTEEEEECTTSCCEEEEECSSSEEEECGGGCCS----CCEEEECC----
T ss_pred             CCCcEEEEEECCcEEEEEEEEcCCEEEeCHHHccC----CceEEEeeeeec
Confidence            57999999998889999999999999999999974    245666665443

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

Probab=99.20  E-value=1.5e-12  Score=89.80  Aligned_cols=63  Identities=22%  Similarity=0.221  Sum_probs=41.4

Q ss_pred             eEEEEEeCCceeEEEEEec------CCEEEecccccCCCCCceEEEEEceeecCCCC---CeecEEECCCCC
Q psy12894         60 WIAALTKKGKFYCGATLIA------KRHVLTAAHCIEGVNPKEIKVTLGEHDRLSKN---ESVPVIIHFSVS  122 (124)
Q Consensus        60 w~v~l~~~~~~~CgGsLi~------~~~vlTaahC~~~~~~~~~~V~~G~~~~~~~~---~~~~vi~Hp~y~  122 (124)
                      ..+.+...+.++|||+||+      ++||||||||+.........+++|........   ...+..+||+|+
T Consensus        24 ~v~~~~~~g~~~CGGsLI~~~~~~~~~~VLTAAHCv~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~   95 (263)
T d1arba_          24 AVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPASGANGDGS   95 (263)
T ss_dssp             GEEEEEETTEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTSGGGGSCCCCC
T ss_pred             EEEEEecCCcEEEEEEEECCCCCCccceEEEchhhCCCCCCcceEEEEEEEeecccceeeeeeeeecccCcc
Confidence            4466677788999999997      77999999999764433344455443332222   223366777775

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

Probab=99.02  E-value=2.5e-11  Score=80.60  Aligned_cols=67  Identities=22%  Similarity=0.260  Sum_probs=46.1

Q ss_pred             CCCCceEEEEEe-CCceeEEEEEecCCEEEecccccCCCC----CceEEEEEceeecCCCCC---eecEEECCCC
Q psy12894         55 LHEFPWIAALTK-KGKFYCGATLIAKRHVLTAAHCIEGVN----PKEIKVTLGEHDRLSKNE---SVPVIIHFSV  121 (124)
Q Consensus        55 ~~~~Pw~v~l~~-~~~~~CgGsLi~~~~vlTaahC~~~~~----~~~~~V~~G~~~~~~~~~---~~~vi~Hp~y  121 (124)
                      ...+||.+.++. .+.+.|+|+||+++||||||||+....    ...+.+.+|..+......   ..+++.||+|
T Consensus        14 ~~~~P~~~~~~i~~~~~~CsG~LI~~~~VLTaaHCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (215)
T d1p3ca_          14 TRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGY   88 (215)
T ss_dssp             TTSTTGGGEEEEECSSCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHH
T ss_pred             CCCCCcEEEEEEEcCCeEEEEEEEeCCEEEECcceeccCCCCceeeeEEEeccccCCCCCceeEEEeEEEEeccc
Confidence            456899765543 345689999999999999999996532    234567777655433322   3348888876

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.18  E-value=1.9e-07  Score=62.93  Aligned_cols=38  Identities=26%  Similarity=0.358  Sum_probs=31.4

Q ss_pred             CCCCCceE--EEEEeCCceeEEEEEecCCEEEecccccCC
Q psy12894         54 KLHEFPWI--AALTKKGKFYCGATLIAKRHVLTAAHCIEG   91 (124)
Q Consensus        54 ~~~~~Pw~--v~l~~~~~~~CgGsLi~~~~vlTaahC~~~   91 (124)
                      ....+||.  +.+...+...|+|+||++++|||||||+..
T Consensus        37 ~~~~~p~~~v~~i~~~g~~~gTG~lI~~~~ILTa~Hvv~~   76 (242)
T d1agja_          37 DRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIAKF   76 (242)
T ss_dssp             GGGSTTGGGEEEEEETTTEEEEEEECSSSEEEECHHHHGG
T ss_pred             ccccCCcccEEEEEeCCCccEEEEEEeCCEEEEcccEecc
Confidence            34467777  567677788999999999999999999964

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.08  E-value=4.3e-07  Score=59.88  Aligned_cols=37  Identities=16%  Similarity=0.343  Sum_probs=27.5

Q ss_pred             CCCCceEE--EEEe---CCceeEEEEEecCCEEEecccccCC
Q psy12894         55 LHEFPWIA--ALTK---KGKFYCGATLIAKRHVLTAAHCIEG   91 (124)
Q Consensus        55 ~~~~Pw~v--~l~~---~~~~~CgGsLi~~~~vlTaahC~~~   91 (124)
                      ..++||.+  .+..   .+.+.|+|+||++++|||||||+.+
T Consensus        14 ~~~~p~~~v~~i~~~~~~~~~~cTG~lI~~~~vLTAaHcv~~   55 (216)
T d2o8la1          14 TTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDA   55 (216)
T ss_dssp             TTSGGGTTEEEEEEEETTEEEEEEEEEEETTEEEECHHHHHT
T ss_pred             CCcCchheEEEEEEEcCCCCEEEEEEEEeCCEEEEeeeeecc
Confidence            33567653  3332   3457899999999999999999965

>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Exfoliative toxin B
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.75  E-value=1e-05  Score=54.66  Aligned_cols=39  Identities=23%  Similarity=0.340  Sum_probs=32.2

Q ss_pred             cCCCCCce--EEEEEeCCceeEEEEEecCCEEEecccccCC
Q psy12894         53 TKLHEFPW--IAALTKKGKFYCGATLIAKRHVLTAAHCIEG   91 (124)
Q Consensus        53 ~~~~~~Pw--~v~l~~~~~~~CgGsLi~~~~vlTaahC~~~   91 (124)
                      ....++||  .+.+...+..+|+|.||++.+|||++||+..
T Consensus        29 ~d~~~~p~~~v~~i~~~g~~~GTGflI~~~~ILTa~HVv~~   69 (246)
T d1qtfa_          29 TDNARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVARE   69 (246)
T ss_dssp             SCCSSTTGGGEEEEEETTTEEEEEEEEETTEEEECHHHHGG
T ss_pred             cccccCccccEEEEEeCCCceEEEEEEeCCeEEEchheccc
Confidence            34456777  5677778888999999999999999999965

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

Probab=96.99  E-value=6.7e-05  Score=47.48  Aligned_cols=24  Identities=33%  Similarity=0.505  Sum_probs=18.4

Q ss_pred             CceeEE-EEEe---cCCEEEecccccCC
Q psy12894         68 GKFYCG-ATLI---AKRHVLTAAHCIEG   91 (124)
Q Consensus        68 ~~~~Cg-GsLi---~~~~vlTaahC~~~   91 (124)
                      +.+.|. |.++   +++|+||||||+..
T Consensus        10 ~~~~Ct~Gf~v~~~g~~~ilTAaHCv~~   37 (187)
T d1hpga_          10 GGSRCSAAFNVTKGGARYFVTAGHCTNI   37 (187)
T ss_dssp             TTEEEECCEEEEETTEEEEEECHHHHTT
T ss_pred             CCCeEeeeEEEEcCCCcEEEEchhcCCC
Confidence            346787 6766   55799999999964

>d2qaaa1 b.47.1.1 (A:16-242) Protease B {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease B
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=90.26  E-value=0.043  Score=34.39  Aligned_cols=23  Identities=30%  Similarity=0.527  Sum_probs=16.8

Q ss_pred             ceeEE-EEEe---cCCEEEecccccCC
Q psy12894         69 KFYCG-ATLI---AKRHVLTAAHCIEG   91 (124)
Q Consensus        69 ~~~Cg-GsLi---~~~~vlTaahC~~~   91 (124)
                      ...|. |..+   +..++|||+||+..
T Consensus        11 ~~~CT~Gf~v~~~~~~~ilTA~Hcv~~   37 (185)
T d2qaaa1          11 TGRCSLGFNVRSGSTYYFLTAGHCTDG   37 (185)
T ss_dssp             SCEEECCEEEEETTEEEEEECHHHHTT
T ss_pred             CCcEeeeEeEEECCccEEEECCCccCC
Confidence            34686 6666   34589999999864

>d2sgaa_ b.47.1.1 (A:) Protease A {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease A
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=87.85  E-value=0.083  Score=32.88  Aligned_cols=22  Identities=32%  Similarity=0.505  Sum_probs=15.6

Q ss_pred             eeEE-EEEecC---CEEEecccccCC
Q psy12894         70 FYCG-ATLIAK---RHVLTAAHCIEG   91 (124)
Q Consensus        70 ~~Cg-GsLi~~---~~vlTaahC~~~   91 (124)
                      ..|+ |..+..   .++|||+||...
T Consensus        12 ~~ct~Gf~v~~~~~~~vlTA~Hc~~~   37 (181)
T d2sgaa_          12 SRCSLGFNVSVNGVAHALTAGHCTNI   37 (181)
T ss_dssp             EEEECCEEEEETTEEEEEECHHHHTT
T ss_pred             ccEeeeEeEEECCCCEEEEChhhCCC
Confidence            4576 555532   489999999965

>d1lcya2 b.47.1.1 (A:6-210) Mitochondrial serine protease HtrA2, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Mitochondrial serine protease HtrA2, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.90  E-value=0.22  Score=31.46  Aligned_cols=21  Identities=19%  Similarity=0.298  Sum_probs=17.9

Q ss_pred             eEEEEEecCC-EEEecccccCC
Q psy12894         71 YCGATLIAKR-HVLTAAHCIEG   91 (124)
Q Consensus        71 ~CgGsLi~~~-~vlTaahC~~~   91 (124)
                      .-+|.+|++. +|||++|++.+
T Consensus        43 ~GSGf~i~~~G~IlT~~HVv~~   64 (205)
T d1lcya2          43 NGSGFVVAADGLIVTNAHVVAD   64 (205)
T ss_dssp             EEEEEEEETTTEEEECHHHHTT
T ss_pred             ceEEEEEECCCeEEEechhhhh
Confidence            4678899976 99999999974

>d2h5ca1 b.47.1.1 (A:15A-245) alpha-Lytic protease {Lysobacter enzymogenes, 495 [TaxId: 69]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: alpha-Lytic protease
species: Lysobacter enzymogenes, 495 [TaxId: 69]

Probab=85.93  E-value=0.52  Score=29.18  Aligned_cols=25  Identities=24%  Similarity=0.299  Sum_probs=16.7

Q ss_pred             CCceeEE-EEE---ecCCEEEecccccCC
Q psy12894         67 KGKFYCG-ATL---IAKRHVLTAAHCIEG   91 (124)
Q Consensus        67 ~~~~~Cg-GsL---i~~~~vlTaahC~~~   91 (124)
                      .+...|. |..   -..+++|||+||...
T Consensus        12 ~~~~~CS~Gf~v~~~~~~~ilTA~Hc~~~   40 (198)
T d2h5ca1          12 NNASLCSVGFSVTRGATKGFVTAGHCGTV   40 (198)
T ss_dssp             TTTEEEECCEEEEETTEEEEEECGGGCCT
T ss_pred             CCCCEEeeeEEEEECCCCEEEEChhcCCC
Confidence            3445675 333   256789999999864

>d2z9ia2 b.47.1.1 (A:6-226) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease PepD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.47  E-value=0.33  Score=30.84  Aligned_cols=32  Identities=19%  Similarity=0.271  Sum_probs=22.3

Q ss_pred             ceEEEEEeC---CceeEEEEEecCC-EEEecccccC
Q psy12894         59 PWIAALTKK---GKFYCGATLIAKR-HVLTAAHCIE   90 (124)
Q Consensus        59 Pw~v~l~~~---~~~~CgGsLi~~~-~vlTaahC~~   90 (124)
                      |-.|.+...   ......|.+|++. +|||.+|++.
T Consensus        12 ~svV~I~~~~~~~~~~GSGfvi~~~G~IlTn~HVV~   47 (221)
T d2z9ia2          12 PSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIA   47 (221)
T ss_dssp             GGEEEEEEEC----CEEEEEECCTTSEEEECHHHHH
T ss_pred             CcEEEEEeccCCcCcceEEEEEECCCEEEEcHHHhh
Confidence            445555432   2246789999876 9999999874

>d2qf3a1 b.47.1.1 (A:43-252) Stress sensor protease DegS, catalytic domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Stress sensor protease DegS, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=82.33  E-value=0.42  Score=30.17  Aligned_cols=30  Identities=23%  Similarity=0.410  Sum_probs=22.1

Q ss_pred             eeEEEEEecCC-EEEecccccCCCCCceEEEEE
Q psy12894         70 FYCGATLIAKR-HVLTAAHCIEGVNPKEIKVTL  101 (124)
Q Consensus        70 ~~CgGsLi~~~-~vlTaahC~~~~~~~~~~V~~  101 (124)
                      ....|.+|+++ +|||++|.+..  ...+.|.+
T Consensus        36 s~GSGfvi~~~G~IlTn~HVV~~--~~~i~v~~   66 (210)
T d2qf3a1          36 TLGSGVIMDQRGYIITNKHVIND--ADQIIVAL   66 (210)
T ss_dssp             EEEEEEECSTTCEEEEEHHHHTT--CSEEEEEC
T ss_pred             cceEEEEEECCceEEechhhccc--cccccccc
Confidence            35789999865 99999999974  24455544